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Overview

ID MAG00102
Name BYD3_bin.10
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Polarisedimenticolia
Order Polarisedimenticolales
Family DASUFT01
Genus DASUFT01
Species
Assembly information
Completeness (%) 94.54
Contamination (%) 1.94
GC content (%) 71.0
N50 (bp) 19,729
Genome size (bp) 4,321,479

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3575

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1007635_0 regulation of canonical Wnt signaling pathway involved in osteoblast differentiation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 404.0
BYD3_k127_1007635_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000004039 246.0
BYD3_k127_1007635_2 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000001828 240.0
BYD3_k127_1007635_3 PFAM ABC transporter related K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000002434 226.0
BYD3_k127_1007635_4 TonB-dependent Receptor Plug K16092 - - 0.00000000000000000000000000000268 140.0
BYD3_k127_1029822_0 COG NOG10142 non supervised orthologous group - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 472.0
BYD3_k127_1029822_1 Belongs to the glutaminase family K01425 - 3.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 480.0
BYD3_k127_1029822_10 His Kinase A (phosphoacceptor) domain K13040 - 2.7.13.3 0.00000000000000000000000000000006784 143.0
BYD3_k127_1029822_11 Transcriptional regulator K02019 - - 0.0000000000000000000000001405 114.0
BYD3_k127_1029822_12 Protein conserved in bacteria - - - 0.0000000000000000000000003967 115.0
BYD3_k127_1029822_13 membrane K08978 - - 0.0000000000000002286 91.0
BYD3_k127_1029822_2 Metallo-beta-lactamase superfamily K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003884 278.0
BYD3_k127_1029822_3 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003496 255.0
BYD3_k127_1029822_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001284 261.0
BYD3_k127_1029822_5 Bacterial extracellular solute-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000009877 226.0
BYD3_k127_1029822_6 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000008385 237.0
BYD3_k127_1029822_7 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000001557 212.0
BYD3_k127_1029822_8 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000002967 165.0
BYD3_k127_1029822_9 response regulator, receiver K07315 - 3.1.3.3 0.00000000000000000000000000000000000000002145 178.0
BYD3_k127_103186_0 TonB dependent receptor K02014,K16087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009052 266.0
BYD3_k127_103186_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000004082 241.0
BYD3_k127_103186_2 - - - - 0.0000000000000000000000000000000000000000000000000000000002529 212.0
BYD3_k127_103186_3 Two component transcriptional regulator, LuxR family - - - 0.000000000000000000000000000000000000000000000000000000915 198.0
BYD3_k127_103186_4 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000003982 181.0
BYD3_k127_103186_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000001062 59.0
BYD3_k127_1048157_0 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000008834 238.0
BYD3_k127_1048157_1 Thrombospondin type 3 repeat - - - 0.000000000000000000000000000000000000000000000006704 190.0
BYD3_k127_1048157_2 PFAM Uncharacterised BCR, COG1649 - - - 0.00000000000000000000000000004045 136.0
BYD3_k127_1048157_3 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000003548 81.0
BYD3_k127_1048157_4 Domain of unknown function (DUF5122) beta-propeller - - - 0.000001637 61.0
BYD3_k127_110369_0 transmembrane transporter activity K18138 - - 0.0 1626.0
BYD3_k127_110369_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 397.0
BYD3_k127_110369_2 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000571 420.0
BYD3_k127_110369_3 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 403.0
BYD3_k127_111376_0 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 442.0
BYD3_k127_111376_1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K21310 - 2.1.1.334 0.00000000000000000000000000000000000000004854 157.0
BYD3_k127_1117305_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 592.0
BYD3_k127_1117305_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 368.0
BYD3_k127_1117305_10 - - - - 0.00000000000000000003002 105.0
BYD3_k127_1117305_11 amino acid - - - 0.00000000000000005824 83.0
BYD3_k127_1117305_12 Putative metal-binding motif - - - 0.00000000000004092 80.0
BYD3_k127_1117305_13 Laminin subunit K06240 GO:0000902,GO:0000904,GO:0001525,GO:0001568,GO:0001655,GO:0001657,GO:0001658,GO:0001667,GO:0001738,GO:0001755,GO:0001763,GO:0001822,GO:0001823,GO:0001942,GO:0001944,GO:0002009,GO:0003158,GO:0003674,GO:0005102,GO:0005178,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005604,GO:0005605,GO:0005610,GO:0005615,GO:0006928,GO:0006996,GO:0007010,GO:0007044,GO:0007045,GO:0007154,GO:0007155,GO:0007160,GO:0007165,GO:0007166,GO:0007229,GO:0007275,GO:0007431,GO:0007435,GO:0007517,GO:0008037,GO:0008104,GO:0008150,GO:0008283,GO:0008544,GO:0009653,GO:0009790,GO:0009887,GO:0009888,GO:0009987,GO:0010033,GO:0014031,GO:0014032,GO:0014033,GO:0016043,GO:0016331,GO:0016477,GO:0019221,GO:0022404,GO:0022405,GO:0022607,GO:0022610,GO:0022612,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030198,GO:0030323,GO:0030324,GO:0030855,GO:0031012,GO:0031589,GO:0032501,GO:0032502,GO:0032989,GO:0032991,GO:0033036,GO:0034097,GO:0034329,GO:0034330,GO:0034332,GO:0034333,GO:0034446,GO:0034613,GO:0035239,GO:0035272,GO:0035295,GO:0040011,GO:0042127,GO:0042221,GO:0042303,GO:0042475,GO:0042476,GO:0042633,GO:0043062,GO:0043083,GO:0043256,GO:0043259,GO:0043260,GO:0043588,GO:0044085,GO:0044420,GO:0044421,GO:0044456,GO:0044782,GO:0044877,GO:0045202,GO:0045216,GO:0045446,GO:0048041,GO:0048468,GO:0048513,GO:0048514,GO:0048598,GO:0048646,GO:0048729,GO:0048731,GO:0048732,GO:0048754,GO:0048762,GO:0048856,GO:0048863,GO:0048864,GO:0048869,GO:0048870,GO:0050789,GO:0050794,GO:0050839,GO:0050896,GO:0051179,GO:0051641,GO:0051674,GO:0051716,GO:0060271,GO:0060429,GO:0060445,GO:0060485,GO:0060541,GO:0060562,GO:0060675,GO:0060993,GO:0061061,GO:0061138,GO:0061326,GO:0061333,GO:0062023,GO:0065007,GO:0070727,GO:0070887,GO:0070925,GO:0071310,GO:0071345,GO:0071840,GO:0072001,GO:0072006,GO:0072009,GO:0072028,GO:0072073,GO:0072078,GO:0072080,GO:0072088,GO:0072163,GO:0072164,GO:0072171,GO:0072358,GO:0072359,GO:0072657,GO:0072659,GO:0098773,GO:0120031,GO:0120036,GO:1990778 - 0.000000000008262 80.0
BYD3_k127_1117305_14 Beta-lactamase class C K06015 - 3.5.1.81 0.00000000004305 78.0
BYD3_k127_1117305_2 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003416 352.0
BYD3_k127_1117305_3 Carbohydrate esterase, sialic acid-specific acetylesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001755 283.0
BYD3_k127_1117305_4 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000009719 205.0
BYD3_k127_1117305_5 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.00000000000000000000000000000000000000000007062 183.0
BYD3_k127_1117305_6 YjbR - - - 0.000000000000000000000000000000000000000000238 162.0
BYD3_k127_1117305_7 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog - - - 0.000000000000000000000000000000000000003042 153.0
BYD3_k127_1117305_8 Phospholipase D. Active site motifs. K06131 - - 0.0000000000000000000000000000000001436 136.0
BYD3_k127_1117305_9 Sulfatase-modifying factor enzyme 1 K07114 - - 0.000000000000000000000000001751 131.0
BYD3_k127_112408_0 aerobic electron transport chain K00425,K08738 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 578.0
BYD3_k127_112408_1 Rubrerythrin K22405 - 1.6.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007906 514.0
BYD3_k127_112408_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000001391 257.0
BYD3_k127_112408_3 Cytochrome c - - - 0.0000000000000000000000000000000000000000006248 174.0
BYD3_k127_112408_4 Cytochrome c K08738 - - 0.000000000000004373 90.0
BYD3_k127_112408_5 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0003383 54.0
BYD3_k127_1178958_0 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 562.0
BYD3_k127_1178958_1 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 563.0
BYD3_k127_1178958_2 Metallo-peptidase family M12B Reprolysin-like - - - 0.0000000000000000000007757 108.0
BYD3_k127_1219103_0 Major Facilitator Superfamily K03446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 467.0
BYD3_k127_1219103_1 Y_Y_Y domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 391.0
BYD3_k127_1219103_2 Glycine betaine K05845 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 351.0
BYD3_k127_1219103_3 Aminotransferase class-V K04127 - 5.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 340.0
BYD3_k127_1219103_5 N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000006264 218.0
BYD3_k127_1219103_6 ABC transporter K05847 - - 0.00000000000000000000000000000000000000000000000000000000001293 234.0
BYD3_k127_1219103_7 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000001893 228.0
BYD3_k127_1219103_8 beta-lactamase - - - 0.0000000000000000000000000000000000000008131 168.0
BYD3_k127_1309377_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 6.997e-248 788.0
BYD3_k127_1309377_1 sorbosone dehydrogenase - - - 3.034e-199 631.0
BYD3_k127_1309377_10 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003597 252.0
BYD3_k127_1309377_11 membrane protein, hemolysin III homolog K11068 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002329 244.0
BYD3_k127_1309377_12 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000008128 208.0
BYD3_k127_1309377_13 - - - - 0.00000000000000000000000000000000000000000000000000000846 207.0
BYD3_k127_1309377_14 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000002895 151.0
BYD3_k127_1309377_15 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000000000000004471 104.0
BYD3_k127_1309377_16 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.0000008848 60.0
BYD3_k127_1309377_17 Integrin alpha (beta-propellor repeats). - - - 0.0003059 54.0
BYD3_k127_1309377_18 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000703 51.0
BYD3_k127_1309377_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 429.0
BYD3_k127_1309377_3 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 411.0
BYD3_k127_1309377_4 FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 426.0
BYD3_k127_1309377_5 PFAM Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 348.0
BYD3_k127_1309377_6 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 331.0
BYD3_k127_1309377_7 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004105 292.0
BYD3_k127_1309377_8 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003274 284.0
BYD3_k127_1309377_9 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001299 265.0
BYD3_k127_1311516_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006704 385.0
BYD3_k127_1311516_1 Thrombospondin type 3 repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003493 376.0
BYD3_k127_1311516_10 Helix-turn-helix domain - - - 0.000000000000000000000000000000000001495 147.0
BYD3_k127_1311516_11 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.0000000000000000000000000000000004558 132.0
BYD3_k127_1311516_12 endothelial cell-cell adhesion K04659 GO:0000902,GO:0001501,GO:0001503,GO:0001932,GO:0001934,GO:0001936,GO:0001938,GO:0001968,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0003416,GO:0003417,GO:0003674,GO:0005102,GO:0005178,GO:0005488,GO:0005509,GO:0005515,GO:0005518,GO:0005539,GO:0005575,GO:0005576,GO:0005604,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005912,GO:0005924,GO:0005927,GO:0006928,GO:0006950,GO:0007155,GO:0007160,GO:0007275,GO:0007399,GO:0007517,GO:0007610,GO:0008150,GO:0008201,GO:0008284,GO:0009653,GO:0009790,GO:0009887,GO:0009888,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0012505,GO:0014812,GO:0016043,GO:0016203,GO:0016477,GO:0016525,GO:0016528,GO:0016529,GO:0019220,GO:0019222,GO:0021700,GO:0022008,GO:0022603,GO:0022607,GO:0022610,GO:0030030,GO:0030054,GO:0030055,GO:0030154,GO:0030182,GO:0030334,GO:0030335,GO:0030855,GO:0031012,GO:0031175,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031589,GO:0031594,GO:0032101,GO:0032103,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032879,GO:0032989,GO:0032990,GO:0032991,GO:0033554,GO:0033555,GO:0033627,GO:0034103,GO:0034976,GO:0035265,GO:0035989,GO:0040007,GO:0040011,GO:0040012,GO:0040017,GO:0042127,GO:0042325,GO:0042327,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043236,GO:0043237,GO:0043931,GO:0043933,GO:0044085,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045202,GO:0045765,GO:0045937,GO:0046872,GO:0048265,GO:0048266,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048589,GO:0048646,GO:0048666,GO:0048699,GO:0048705,GO:0048731,GO:0048799,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050678,GO:0050679,GO:0050730,GO:0050731,GO:0050789,GO:0050793,GO:0050794,GO:0050839,GO:0050840,GO:0050896,GO:0050920,GO:0050921,GO:0051093,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051216,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051270,GO:0051272,GO:0051451,GO:0051674,GO:0051716,GO:0060231,GO:0060255,GO:0060343,GO:0060346,GO:0060348,GO:0060349,GO:0060350,GO:0060351,GO:0060429,GO:0060538,GO:0061053,GO:0061061,GO:0061383,GO:0061430,GO:0061448,GO:0062023,GO:0065003,GO:0065007,GO:0070161,GO:0070977,GO:0071603,GO:0071622,GO:0071624,GO:0071695,GO:0071840,GO:0080090,GO:0090022,GO:0090023,GO:0090136,GO:0097367,GO:0098609,GO:0098868,GO:0120036,GO:0120039,GO:1901342,GO:1901343,GO:1901681,GO:1902622,GO:1902624,GO:2000026,GO:2000145,GO:2000147,GO:2000181 - 0.0000000000000000000000000000000008445 151.0
BYD3_k127_1311516_13 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000001453 147.0
BYD3_k127_1311516_14 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000001349 130.0
BYD3_k127_1311516_15 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000000005512 117.0
BYD3_k127_1311516_16 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000001101 123.0
BYD3_k127_1311516_17 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000003445 100.0
BYD3_k127_1311516_18 Competence protein - - - 0.000000000000000002182 94.0
BYD3_k127_1311516_19 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - - - 0.00000000000000002421 96.0
BYD3_k127_1311516_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 355.0
BYD3_k127_1311516_20 regulation of response to stimulus K01126,K21449 - 3.1.4.46 0.000000000005021 80.0
BYD3_k127_1311516_21 regulation of response to stimulus K01126,K21449 - 3.1.4.46 0.0000000008233 73.0
BYD3_k127_1311516_22 HPr kinase - - - 0.0000003764 62.0
BYD3_k127_1311516_23 Recombinase zinc beta ribbon domain - - - 0.000000526 63.0
BYD3_k127_1311516_24 Thrombospondin type 3 repeat - - - 0.00001065 58.0
BYD3_k127_1311516_3 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001752 293.0
BYD3_k127_1311516_4 ADP-ribosylation factor family K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005159 283.0
BYD3_k127_1311516_5 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000002521 239.0
BYD3_k127_1311516_6 lipopolysaccharide metabolic process K19804 - - 0.0000000000000000000000000000000000000000000000000002413 205.0
BYD3_k127_1311516_7 PFAM Roadblock LC7 family protein - - - 0.000000000000000000000000000000000000000000000000001153 192.0
BYD3_k127_1311516_8 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000000000000005173 164.0
BYD3_k127_1311516_9 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000002187 154.0
BYD3_k127_1345374_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 1.983e-287 917.0
BYD3_k127_1345374_1 thiolester hydrolase activity K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 314.0
BYD3_k127_1345374_2 - - - - 0.0000000000000000000000000000000000000000000000000142 197.0
BYD3_k127_1345374_3 Glyoxalase-like domain K08234 - - 0.000000000000000000000000000000000000000000002517 174.0
BYD3_k127_1345374_4 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000002792 167.0
BYD3_k127_1345374_5 Protein of unknown function (DUF1697) - - - 0.00000000000000000000000000000000000005738 151.0
BYD3_k127_1345374_6 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000000000000000000000000000001816 138.0
BYD3_k127_1345374_7 FR47-like protein K03829 - - 0.000000000000000000000000000000002448 132.0
BYD3_k127_1386617_0 PFAM Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 478.0
BYD3_k127_1386617_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005916 372.0
BYD3_k127_1386617_2 molybdenum ion binding K07140 - - 0.0000000000000000000000000000000000000000000000000000000000002344 219.0
BYD3_k127_1386617_3 thiolester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000003011 208.0
BYD3_k127_1386617_4 - - - - 0.00000000000004508 80.0
BYD3_k127_1386617_5 Cysteine-rich CPXCG - - - 0.00000000000006507 81.0
BYD3_k127_1386617_6 - - - - 0.0000000000001163 77.0
BYD3_k127_1409687_0 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 588.0
BYD3_k127_1409687_1 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000000000006306 211.0
BYD3_k127_1409687_2 DoxX family K15977 - - 0.000000000000000000000000001504 119.0
BYD3_k127_1409687_3 PKD domain - - - 0.000007923 49.0
BYD3_k127_1433294_0 Domain of unknown function (DUF4440) - - - 0.00001791 49.0
BYD3_k127_1456249_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006928 493.0
BYD3_k127_1456249_1 e3 binding domain K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004418 340.0
BYD3_k127_1456249_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 318.0
BYD3_k127_1456249_3 Biotin/lipoate A/B protein ligase family K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000003081 198.0
BYD3_k127_1456249_4 Outer membrane receptor for ferrienterochelin and colicins - - - 0.0000000000000000000000000000001847 144.0
BYD3_k127_1456249_5 Thioredoxin-like K02199 - - 0.000000000000000000005648 102.0
BYD3_k127_1456249_6 Belongs to the UPF0102 family K07460 - - 0.00000000000000000003073 106.0
BYD3_k127_1456249_7 Peptidase M56 - - - 0.000000000000000001038 100.0
BYD3_k127_1536354_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.121e-201 647.0
BYD3_k127_1536354_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 375.0
BYD3_k127_1536354_10 Heat shock 70 kDa protein K04043 - - 0.00004817 57.0
BYD3_k127_1536354_2 Aminotransferase class I and II K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 369.0
BYD3_k127_1536354_3 GHMP kinases C terminal K07031 - 2.7.1.168 0.00000000000000000000000000000000000000000000000000000002685 209.0
BYD3_k127_1536354_4 NUDIX domain - - - 0.00000000000000000000000000000000000000000000006556 176.0
BYD3_k127_1536354_5 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.0000000000000000000000000000000000000000000006338 173.0
BYD3_k127_1536354_6 Protein of unknown function (DUF3467) - - - 0.000000000000000000001114 96.0
BYD3_k127_1536354_7 COG0237 Dephospho-CoA kinase - - - 0.00000000000000005181 88.0
BYD3_k127_1536354_8 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000000009243 79.0
BYD3_k127_1536354_9 Polymer-forming cytoskeletal - - - 0.00000002056 62.0
BYD3_k127_1625917_0 Phosphate acyltransferases K00655,K01897 - 2.3.1.51,6.2.1.3 2.397e-227 732.0
BYD3_k127_1625917_1 ABC transporter - - - 6.718e-207 665.0
BYD3_k127_1625917_10 ATP-independent chaperone mediated protein folding - - - 0.000000000000000000005314 100.0
BYD3_k127_1625917_11 - - - - 0.0000000000000000006865 100.0
BYD3_k127_1625917_12 Sulfurtransferase TusA K04085 - - 0.0000000000000002426 84.0
BYD3_k127_1625917_13 PA14 domain - GO:0005575,GO:0005576 - 0.0000000000001059 83.0
BYD3_k127_1625917_14 ABC transporter K06147,K11004 - - 0.0000002405 64.0
BYD3_k127_1625917_2 (ABC) transporter K15738 - - 1.467e-198 641.0
BYD3_k127_1625917_3 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 427.0
BYD3_k127_1625917_4 HAMP domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 375.0
BYD3_k127_1625917_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006346 337.0
BYD3_k127_1625917_6 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000926 351.0
BYD3_k127_1625917_7 PLD-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004623 280.0
BYD3_k127_1625917_8 MgtC family K07507 - - 0.000000000000000000000000000000000000000000000000000005711 194.0
BYD3_k127_1625917_9 SCO1/SenC - - - 0.0000000000000000000005335 110.0
BYD3_k127_1673978_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.718e-248 781.0
BYD3_k127_1673978_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 452.0
BYD3_k127_1673978_2 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000000000006841 153.0
BYD3_k127_1673978_3 SMART Integrin alpha beta-propellor repeat protein - - - 0.0000000000000000000000000000007998 135.0
BYD3_k127_1673978_4 Deoxynucleoside kinase - - - 0.00000000000000006417 81.0
BYD3_k127_1673978_5 peptidyl-tyrosine sulfation - - - 0.000000000128 69.0
BYD3_k127_1679508_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03696 - - 5.116e-215 700.0
BYD3_k127_1679508_1 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000004316 169.0
BYD3_k127_1679508_2 Kazal-type serine protease inhibitor domain - - - 0.0006697 45.0
BYD3_k127_1707268_0 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 304.0
BYD3_k127_1707268_1 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000000001137 190.0
BYD3_k127_1722913_0 Protein of unknown function (DUF962) - - - 0.000000000000000000000000000000000000000001512 160.0
BYD3_k127_1722913_1 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000000000000000000000000000000005591 129.0
BYD3_k127_1722913_2 Protein of unknown function (DUF1648) - - - 0.0000000000000000000000003025 119.0
BYD3_k127_1726463_0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 582.0
BYD3_k127_1726463_1 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 594.0
BYD3_k127_1726463_10 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000000000003837 103.0
BYD3_k127_1726463_11 PFAM YbbR family protein - - - 0.00000000000000000002619 103.0
BYD3_k127_1726463_12 Fe2 transport system protein A K04758 - - 0.00000000000002527 73.0
BYD3_k127_1726463_2 cytochrome c peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 471.0
BYD3_k127_1726463_3 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 464.0
BYD3_k127_1726463_4 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 420.0
BYD3_k127_1726463_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 366.0
BYD3_k127_1726463_6 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000004803 267.0
BYD3_k127_1726463_7 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.0000000000000000000000000000000000000000000000000000000005815 217.0
BYD3_k127_1726463_8 Uncharacterized ACR, COG1993 K09137 - - 0.000000000000000000000000000000000000000002136 157.0
BYD3_k127_1726463_9 Alginate export - - - 0.000000000000000000000000000000000001967 152.0
BYD3_k127_173707_0 Binding-protein-dependent transport system inner membrane component K02037,K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007417 584.0
BYD3_k127_173707_1 phosphate transport system permease protein K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 565.0
BYD3_k127_173707_10 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000293 237.0
BYD3_k127_173707_11 deaminase K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000000000000000001565 232.0
BYD3_k127_173707_12 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000007717 231.0
BYD3_k127_173707_13 Two component transcriptional regulator, winged helix family K02483 - - 0.000000000000000000000000000000000000000000000000000000000003111 234.0
BYD3_k127_173707_14 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000004626 220.0
BYD3_k127_173707_15 Phosphate-selective porin O and P - - - 0.00000000000000000000000000000003456 142.0
BYD3_k127_173707_16 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.0000000000000000000000003442 113.0
BYD3_k127_173707_17 hydrolase family 81 - - - 0.000000000005652 76.0
BYD3_k127_173707_2 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009221 473.0
BYD3_k127_173707_3 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 467.0
BYD3_k127_173707_4 heme binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 454.0
BYD3_k127_173707_5 COG0226 ABC-type phosphate transport system periplasmic K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 441.0
BYD3_k127_173707_6 response regulator receiver K07714,K10943 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007704 423.0
BYD3_k127_173707_7 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 372.0
BYD3_k127_173707_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002027 264.0
BYD3_k127_173707_9 PFAM ATP-binding region, ATPase domain protein K02668,K07708,K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000007133 264.0
BYD3_k127_1744567_0 High confidence in function and specificity - - - 2.649e-260 819.0
BYD3_k127_1744567_1 Domain of unknown function (DUF3459) K01236 - 3.2.1.141 6.536e-236 745.0
BYD3_k127_1744567_2 cellulase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 396.0
BYD3_k127_1744567_3 ParB-like nuclease domain K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 355.0
BYD3_k127_1744567_4 Protein-disulfide isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004496 318.0
BYD3_k127_1744567_5 cellulase activity - - - 0.00000000000000000000000000000000000000000000455 189.0
BYD3_k127_1744567_6 N-terminal domain of unknown function (DUF4140) - - - 0.000000000000000000000000000000000000005131 161.0
BYD3_k127_1744567_7 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000000000000184 124.0
BYD3_k127_1744567_8 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.00000000000000001974 98.0
BYD3_k127_1745910_0 Bacterial protein of unknown function (DUF853) K06915 - - 2.604e-226 711.0
BYD3_k127_1745910_1 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 526.0
BYD3_k127_1745910_2 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002578 263.0
BYD3_k127_1745910_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000002212 197.0
BYD3_k127_1745910_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000003505 139.0
BYD3_k127_1745910_5 OmpA-like transmembrane domain - - - 0.0000000001971 70.0
BYD3_k127_1745910_6 Peroxisomal biogenesis factor 5 K13342,K20915 GO:0000038,GO:0000268,GO:0001764,GO:0002119,GO:0002164,GO:0003008,GO:0003674,GO:0005048,GO:0005052,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005782,GO:0005794,GO:0005829,GO:0006082,GO:0006464,GO:0006605,GO:0006612,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006807,GO:0006810,GO:0006886,GO:0006928,GO:0006996,GO:0007005,GO:0007006,GO:0007029,GO:0007031,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009791,GO:0009987,GO:0010256,GO:0012505,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016042,GO:0016043,GO:0016054,GO:0016477,GO:0016558,GO:0016560,GO:0016561,GO:0016567,GO:0017038,GO:0019395,GO:0019538,GO:0019752,GO:0019899,GO:0021537,GO:0021543,GO:0021795,GO:0021885,GO:0021895,GO:0021953,GO:0021987,GO:0022008,GO:0022029,GO:0022607,GO:0030154,GO:0030182,GO:0030258,GO:0030900,GO:0031090,GO:0031267,GO:0031333,GO:0031903,GO:0031907,GO:0031974,GO:0032446,GO:0032459,GO:0032460,GO:0032462,GO:0032463,GO:0032501,GO:0032502,GO:0032787,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034440,GO:0034613,GO:0036211,GO:0040008,GO:0040011,GO:0040014,GO:0040018,GO:0042221,GO:0042277,GO:0042493,GO:0042579,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043412,GO:0043436,GO:0043574,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045046,GO:0045184,GO:0045927,GO:0046395,GO:0046907,GO:0047485,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048638,GO:0048639,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050896,GO:0050905,GO:0051020,GO:0051094,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051259,GO:0051262,GO:0051641,GO:0051649,GO:0051674,GO:0055085,GO:0055114,GO:0060322,GO:0061024,GO:0065002,GO:0065003,GO:0065007,GO:0070013,GO:0070647,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072347,GO:0072594,GO:0072657,GO:0072662,GO:0072663,GO:0090150,GO:0098588,GO:0098805,GO:1901090,GO:1901091,GO:1901093,GO:1901094,GO:1901564,GO:1901575 - 0.0009926 52.0
BYD3_k127_1790122_0 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000006186 264.0
BYD3_k127_1790122_1 ligase activity, forming carbon-carbon bonds K00627,K00645,K02160 - 2.3.1.12,2.3.1.39 0.0000000000000000000000116 108.0
BYD3_k127_1790122_2 PFAM carboxyl transferase K01615 - 4.1.1.70 0.000000000000000000001488 95.0
BYD3_k127_1793158_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 1.916e-238 740.0
BYD3_k127_1793158_1 - - - - 0.000000000000000000000000001149 127.0
BYD3_k127_1803578_0 Proto-chlorophyllide reductase 57 kD subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 354.0
BYD3_k127_1803578_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000357 340.0
BYD3_k127_1803578_2 - - - - 0.000000000000000000000000000000000000000000000000000000000003273 215.0
BYD3_k127_1803578_3 protein tyrosine kinase activity K03593 - - 0.00000000000000000000000000000000000000000008776 173.0
BYD3_k127_1803578_4 Dioxygenase K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000001368 166.0
BYD3_k127_1803578_5 protocatechuate 3,4-dioxygenase activity K00449 - 1.13.11.3 0.000000000000000000000000001195 124.0
BYD3_k127_1803578_7 Putative adhesin - - - 0.000000000002576 74.0
BYD3_k127_1837686_0 PFAM Proprotein convertase P-domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009789 271.0
BYD3_k127_1837686_1 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000000000000000000000000000000000000000002457 255.0
BYD3_k127_1837686_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000001405 143.0
BYD3_k127_1837686_3 Penicillinase repressor - - - 0.000000000000000000000000000000000008204 141.0
BYD3_k127_1837686_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000001444 152.0
BYD3_k127_1837686_5 PQQ-like domain - - - 0.000000000000000000000000002157 124.0
BYD3_k127_1837686_6 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000002911 111.0
BYD3_k127_1837686_7 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000003969 90.0
BYD3_k127_1837686_8 Subtilase family - - - 0.00000001312 70.0
BYD3_k127_1837686_9 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0001665 45.0
BYD3_k127_1855638_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 8.47e-245 766.0
BYD3_k127_1855638_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000004632 276.0
BYD3_k127_1855638_2 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K15396 - 2.1.1.200 0.0000000000000000000000000000000000000001569 163.0
BYD3_k127_1855638_3 PilZ domain - - - 0.00000000007033 68.0
BYD3_k127_1855638_4 thiolester hydrolase activity K06889 - - 0.00008318 53.0
BYD3_k127_196136_0 AcrB/AcrD/AcrF family - - - 0.0 1312.0
BYD3_k127_196136_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000006986 236.0
BYD3_k127_196136_2 - - - - 0.000000000000000000000000000000000004197 147.0
BYD3_k127_196136_3 protein methyltransferase activity - - - 0.00000000000000000000000000001812 129.0
BYD3_k127_196136_4 - - - - 0.000000000000000000000000001006 115.0
BYD3_k127_196136_5 Protein of unknown function (DUF2892) - - - 0.0000000000000001643 81.0
BYD3_k127_196136_7 Transcriptional regulator - - - 0.00000001913 63.0
BYD3_k127_1988705_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1147.0
BYD3_k127_1988705_1 PFAM CBS domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007511 416.0
BYD3_k127_1988705_2 major pilin protein fima - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 365.0
BYD3_k127_1988705_3 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004337 297.0
BYD3_k127_1988705_4 Peptidase dimerisation domain K01436 - - 0.000000000000000000000000000000000000004332 154.0
BYD3_k127_1988705_5 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000001349 141.0
BYD3_k127_1988705_6 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000004516 136.0
BYD3_k127_1988705_7 chain release factor K15034 - - 0.0000000000000000000000000402 123.0
BYD3_k127_1988705_8 Tetratricopeptide repeat - - - 0.0000000000008185 77.0
BYD3_k127_1999181_0 Adenylate and Guanylate cyclase catalytic domain - - - 2.145e-295 930.0
BYD3_k127_2004812_0 Tricorn protease PDZ domain K08676 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 592.0
BYD3_k127_2004812_1 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001429 284.0
BYD3_k127_2004812_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000002348 173.0
BYD3_k127_2004812_4 ABC-2 family transporter protein K01992 - - 0.0000000000005132 83.0
BYD3_k127_2012096_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 1.373e-303 959.0
BYD3_k127_2012096_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 583.0
BYD3_k127_2012096_10 o-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008558 289.0
BYD3_k127_2012096_11 Inositol monophosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001206 269.0
BYD3_k127_2012096_12 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000002756 281.0
BYD3_k127_2012096_13 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.00000000000000000000000000000000000000000000000000000000118 216.0
BYD3_k127_2012096_14 Thiamine biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000001175 209.0
BYD3_k127_2012096_15 Two component transcriptional regulator, LuxR family K02282 - - 0.0000000000000000000000000000000000000000000000001354 193.0
BYD3_k127_2012096_16 - - - - 0.00000000000000000000000000000000000000000000001995 181.0
BYD3_k127_2012096_17 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000005849 160.0
BYD3_k127_2012096_18 Diguanylate cyclase - - - 0.00000000000000000000000000002143 136.0
BYD3_k127_2012096_19 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07675 - 2.7.13.3 0.000000000000000000000000003056 119.0
BYD3_k127_2012096_2 Histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 527.0
BYD3_k127_2012096_20 Rossmann-like domain - - - 0.00000000000000000000122 110.0
BYD3_k127_2012096_21 cheY-homologous receiver domain - - - 0.00000000000000000002832 98.0
BYD3_k127_2012096_22 response regulator, receiver - - - 0.00000000000000001592 88.0
BYD3_k127_2012096_24 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000001629 67.0
BYD3_k127_2012096_25 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000002931 71.0
BYD3_k127_2012096_26 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338,K08675 - 3.4.21.53 0.00001024 59.0
BYD3_k127_2012096_27 PEP-CTERM system TPR-repeat lipoprotein - - - 0.00004087 57.0
BYD3_k127_2012096_28 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.0006667 44.0
BYD3_k127_2012096_3 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 456.0
BYD3_k127_2012096_4 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008417 404.0
BYD3_k127_2012096_5 PFAM short chain dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 406.0
BYD3_k127_2012096_6 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 353.0
BYD3_k127_2012096_7 PDZ domain (Also known as DHR or GLGF) K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 329.0
BYD3_k127_2012096_8 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004921 325.0
BYD3_k127_2012096_9 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 305.0
BYD3_k127_2058588_0 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032,K13892 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 427.0
BYD3_k127_2058588_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000322 267.0
BYD3_k127_2058588_2 Oligopeptide/dipeptide transporter, C-terminal region K15583 - - 0.00000000000000000000000000000000000000000000000000000000000007873 216.0
BYD3_k127_2070760_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 5.955e-241 751.0
BYD3_k127_2070760_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.041e-231 726.0
BYD3_k127_2070760_10 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000001301 239.0
BYD3_k127_2070760_11 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000001183 194.0
BYD3_k127_2070760_12 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000001086 125.0
BYD3_k127_2070760_13 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000893 109.0
BYD3_k127_2070760_14 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000005373 106.0
BYD3_k127_2070760_15 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000001393 101.0
BYD3_k127_2070760_16 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000004331 86.0
BYD3_k127_2070760_17 R3H domain protein K06346 - - 0.0000000000000004537 87.0
BYD3_k127_2070760_18 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000001587 71.0
BYD3_k127_2070760_19 PFAM glycosyl transferase family 2 - - - 0.000000000004048 69.0
BYD3_k127_2070760_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 621.0
BYD3_k127_2070760_20 Polymer-forming cytoskeletal - - - 0.0000001315 59.0
BYD3_k127_2070760_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 460.0
BYD3_k127_2070760_4 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 400.0
BYD3_k127_2070760_5 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 311.0
BYD3_k127_2070760_6 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 314.0
BYD3_k127_2070760_7 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008597 283.0
BYD3_k127_2070760_8 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002572 278.0
BYD3_k127_2070760_9 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000002907 228.0
BYD3_k127_208843_0 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004784 419.0
BYD3_k127_208843_1 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000001377 233.0
BYD3_k127_208843_2 - - - - 0.0000008347 61.0
BYD3_k127_2152286_0 Lantibiotic dehydratase, C terminus - - - 0.000000000000000000000000000000000000000000000003585 199.0
BYD3_k127_2152286_1 Lantibiotic biosynthesis dehydratase C-term K20483 - - 0.000000000000000000000002715 116.0
BYD3_k127_2152286_2 Methyltransferase - - - 0.00000000000000000000002968 116.0
BYD3_k127_2152286_3 - - - - 0.00000001067 64.0
BYD3_k127_2152286_4 Lantibiotic biosynthesis dehydratase C-term K20483 - - 0.00000001165 66.0
BYD3_k127_2152286_5 Lantibiotic biosynthesis dehydratase C-term - - - 0.00001716 56.0
BYD3_k127_225071_0 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 571.0
BYD3_k127_225071_1 Rod shape-determining protein K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 460.0
BYD3_k127_225071_10 PFAM FecR protein - - - 0.0000000000000000001416 103.0
BYD3_k127_225071_11 Tetratricopeptide repeat - - - 0.00000000000000001573 90.0
BYD3_k127_225071_12 Radical SAM domain protein - - - 0.0000000000000000916 83.0
BYD3_k127_225071_13 cheY-homologous receiver domain K02490 - - 0.0000000000001168 76.0
BYD3_k127_225071_2 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 444.0
BYD3_k127_225071_3 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 396.0
BYD3_k127_225071_4 Phosphohydrolase-associated domain K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 393.0
BYD3_k127_225071_5 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003181 267.0
BYD3_k127_225071_6 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000572 213.0
BYD3_k127_225071_7 Beta-eliminating lyase K00639 - 2.3.1.29 0.000000000000000000000000000000000014 136.0
BYD3_k127_225071_8 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000003873 134.0
BYD3_k127_225071_9 Cell shape-determining protein MreC K03570 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0030428,GO:0031224,GO:0031226,GO:0042546,GO:0043621,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944,GO:0071963 - 0.00000000000000000000000000004846 127.0
BYD3_k127_2275199_0 SelR domain K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000547 214.0
BYD3_k127_2275199_1 Protein of unknown function (DUF520) K09767 - - 0.00000000000000000000000000000000000000000000000000002787 192.0
BYD3_k127_2275199_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000001629 91.0
BYD3_k127_2280865_0 DNA-templated transcription, termination K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009529 594.0
BYD3_k127_2280865_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005014 580.0
BYD3_k127_2280865_10 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000001191 76.0
BYD3_k127_2280865_12 Superinfection immunity protein - - - 0.00000186 57.0
BYD3_k127_2280865_13 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589,K13052 - - 0.00001189 55.0
BYD3_k127_2280865_14 Recombinase - - - 0.00003701 54.0
BYD3_k127_2280865_2 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 - 4.4.1.1,4.4.1.2,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 453.0
BYD3_k127_2280865_3 Peptidase family M20/M25/M40 K01270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 425.0
BYD3_k127_2280865_4 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000001434 159.0
BYD3_k127_2280865_5 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.000000000000000000000000000006219 132.0
BYD3_k127_2280865_7 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000000000004105 103.0
BYD3_k127_2280865_8 translation initiation factor activity K03699 - - 0.000000000000000000005344 102.0
BYD3_k127_2280865_9 translation initiation factor activity K03699 - - 0.000000000000006417 88.0
BYD3_k127_2286197_0 Berberine and berberine like - - - 4.151e-255 793.0
BYD3_k127_2286197_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 5.286e-234 739.0
BYD3_k127_2286197_10 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.0000007217 64.0
BYD3_k127_2286197_11 repeat protein - - - 0.00005869 48.0
BYD3_k127_2286197_2 PFAM Cytochrome c oxidase, subunit I K04561 - 1.7.2.5 2.969e-212 677.0
BYD3_k127_2286197_3 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 525.0
BYD3_k127_2286197_4 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 435.0
BYD3_k127_2286197_5 cytochrome c K02305 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 338.0
BYD3_k127_2286197_6 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000004032 199.0
BYD3_k127_2286197_7 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000007168 189.0
BYD3_k127_2286197_8 Transcriptional regulator K16137 - - 0.000000000000000000000000008089 119.0
BYD3_k127_2286197_9 PFAM blue (type 1) copper domain protein - - - 0.0000001072 66.0
BYD3_k127_22913_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1535.0
BYD3_k127_22913_1 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 1.342e-292 917.0
BYD3_k127_22913_10 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000000000000004112 153.0
BYD3_k127_22913_11 Rrf2 family - - - 0.000000000000000000000000000004044 125.0
BYD3_k127_22913_12 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000000000000000004986 123.0
BYD3_k127_22913_13 PFAM sodium K14445 - - 0.00000000000000000000000000001813 134.0
BYD3_k127_22913_14 - K01387,K06399 - 3.4.21.116,3.4.24.3 0.00000000000000000000000000005838 133.0
BYD3_k127_22913_15 Sigma-70 region 2 K03088 - - 0.0000003049 59.0
BYD3_k127_22913_16 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00188 - 1.2.7.7 0.00003317 47.0
BYD3_k127_22913_17 sequence-specific DNA binding - - - 0.0001802 53.0
BYD3_k127_22913_2 Beta-eliminating lyase K01667 - 4.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 569.0
BYD3_k127_22913_3 Acetyl-CoA hydrolase/transferase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 565.0
BYD3_k127_22913_4 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 556.0
BYD3_k127_22913_5 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 470.0
BYD3_k127_22913_6 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009925 369.0
BYD3_k127_22913_7 alanine dehydrogenase activity K00259 GO:0000286,GO:0001666,GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009628,GO:0009653,GO:0009987,GO:0016020,GO:0016054,GO:0016491,GO:0016638,GO:0019752,GO:0030154,GO:0030312,GO:0030435,GO:0032502,GO:0036293,GO:0043436,GO:0043934,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048646,GO:0048856,GO:0048869,GO:0050896,GO:0055114,GO:0070482,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008052 301.0
BYD3_k127_22913_8 Pyruvate:ferredoxin oxidoreductase core domain II K00186 - 1.2.7.7 0.00000000000000000000000000000000000000000000851 175.0
BYD3_k127_22913_9 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000000000000000000002967 165.0
BYD3_k127_2303336_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1394.0
BYD3_k127_2303336_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 4.322e-301 945.0
BYD3_k127_2303336_10 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006657 612.0
BYD3_k127_2303336_11 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 564.0
BYD3_k127_2303336_12 ABC transporter K06022,K06158,K10834 - 3.6.3.29,3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008 539.0
BYD3_k127_2303336_13 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 531.0
BYD3_k127_2303336_14 nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006183 489.0
BYD3_k127_2303336_15 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 472.0
BYD3_k127_2303336_16 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009699 472.0
BYD3_k127_2303336_17 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 437.0
BYD3_k127_2303336_18 COG2133 Glucose sorbosone dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008722 424.0
BYD3_k127_2303336_19 Acyl-transferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 385.0
BYD3_k127_2303336_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 5.984e-292 927.0
BYD3_k127_2303336_20 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 303.0
BYD3_k127_2303336_21 CorA-like Mg2+ transporter protein K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 305.0
BYD3_k127_2303336_22 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000792 295.0
BYD3_k127_2303336_23 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000003174 258.0
BYD3_k127_2303336_24 Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003887 261.0
BYD3_k127_2303336_25 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000001587 262.0
BYD3_k127_2303336_26 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032991,GO:0032993,GO:0033554,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000008891 245.0
BYD3_k127_2303336_27 Conserved hypothetical protein 698 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001992 252.0
BYD3_k127_2303336_28 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000181 240.0
BYD3_k127_2303336_29 PFAM Radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000001663 241.0
BYD3_k127_2303336_3 benzoyl-CoA oxygenase K15512 - 1.14.13.208 1.595e-221 694.0
BYD3_k127_2303336_30 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000001493 221.0
BYD3_k127_2303336_31 Allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000000000000000000005238 237.0
BYD3_k127_2303336_32 Phospholipase D Transphosphatidylase K06131 - - 0.00000000000000000000000000000000000000000000000000000000003734 223.0
BYD3_k127_2303336_33 arylamine N-acetyltransferase activity K00675 - 2.3.1.118 0.00000000000000000000000000000000000000000000000000003034 208.0
BYD3_k127_2303336_34 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K15546 - - 0.0000000000000000000000000000000000000000000000000001766 194.0
BYD3_k127_2303336_35 Arginase family K01480 - 3.5.3.11 0.0000000000000000000000000000000000000000000000000003454 206.0
BYD3_k127_2303336_36 Haloacid dehalogenase-like hydrolase K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000001417 194.0
BYD3_k127_2303336_37 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000004072 192.0
BYD3_k127_2303336_38 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000004612 198.0
BYD3_k127_2303336_39 5-oxoprolinase (ATP-hydrolyzing) activity K07160 - - 0.0000000000000000000000000000000000000000000000002166 198.0
BYD3_k127_2303336_4 Enoyl-CoA hydratase/isomerase K15513 - 4.1.2.44 1.47e-213 676.0
BYD3_k127_2303336_40 5-oxoprolinase (ATP-hydrolyzing) activity K01457,K01941,K06351,K07160 - 3.5.1.54,6.3.4.6 0.000000000000000000000000000000000000000000000003648 193.0
BYD3_k127_2303336_41 Memo-like protein - - - 0.000000000000000000000000000000000000000000001588 179.0
BYD3_k127_2303336_42 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000001411 165.0
BYD3_k127_2303336_43 acetyltransferase - - - 0.0000000000000000000000000000000000000000006132 161.0
BYD3_k127_2303336_44 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000001724 162.0
BYD3_k127_2303336_45 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 K03775 - 5.2.1.8 0.000000000000000000000000000000000000000007061 159.0
BYD3_k127_2303336_46 Sigma-70 factor, region 1.2 - - - 0.000000000000000000000000000000000000002844 160.0
BYD3_k127_2303336_47 Membrane K08988 - - 0.0000000000000000000000000000000000003374 146.0
BYD3_k127_2303336_48 Hsp20/alpha crystallin family K13993 - - 0.000000000000000000000000000000000002271 143.0
BYD3_k127_2303336_49 PFAM AMMECR1 domain protein K09141 - - 0.000000000000000000000000000000000005085 143.0
BYD3_k127_2303336_5 synthetase (ADP forming), alpha K01905,K09181,K22224 - 6.2.1.13 2.992e-208 675.0
BYD3_k127_2303336_50 transferase activity, transferring glycosyl groups K20541 - - 0.0000000000000000000000000000000001249 144.0
BYD3_k127_2303336_51 Cupin superfamily (DUF985) K09705 - - 0.00000000000000000000000000000001109 149.0
BYD3_k127_2303336_52 Redoxin K03564 - 1.11.1.15 0.00000000000000000000000000003888 119.0
BYD3_k127_2303336_53 acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.0000000000000000000000000001331 121.0
BYD3_k127_2303336_54 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000001675 113.0
BYD3_k127_2303336_55 PFAM Transglycosylase-associated protein - - - 0.0000000000000000000000002371 109.0
BYD3_k127_2303336_56 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives K02343 - 2.7.7.7 0.000000000000000000000003641 119.0
BYD3_k127_2303336_57 sigma factor activity K02405 - - 0.00000000000000000000002124 110.0
BYD3_k127_2303336_58 PASTA K12132 - 2.7.11.1 0.0000000000000000000001414 107.0
BYD3_k127_2303336_59 Domain of unknown function (DUF5060) - - - 0.0000000000000000000004189 112.0
BYD3_k127_2303336_6 IgA Peptidase M64 - - - 2.293e-202 640.0
BYD3_k127_2303336_60 Tricorn protease C1 domain K03797 - 3.4.21.102 0.0000000000000000004761 102.0
BYD3_k127_2303336_61 Belongs to the 5'-nucleotidase family K01119 - 3.1.3.6,3.1.4.16 0.00000000000000001028 94.0
BYD3_k127_2303336_62 GCN5-related N-acetyl-transferase K06975 - - 0.0000000000000002677 87.0
BYD3_k127_2303336_63 - - - - 0.0000000000000005892 87.0
BYD3_k127_2303336_64 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000007683 89.0
BYD3_k127_2303336_65 Redoxin K03564 - 1.11.1.15 0.0000000000003125 73.0
BYD3_k127_2303336_66 Thiamin pyrophosphokinase, vitamin B1 binding domain K00949 - 2.7.6.2 0.000000000002124 77.0
BYD3_k127_2303336_67 Protein of unknown function (DUF2905) - - - 0.000000000003697 68.0
BYD3_k127_2303336_68 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.00000000008336 74.0
BYD3_k127_2303336_69 - - - - 0.000000000198 71.0
BYD3_k127_2303336_7 5TM C-terminal transporter carbon starvation CstA K06200 - - 8.478e-200 644.0
BYD3_k127_2303336_70 Protein of unknown function (DUF2934) - - - 0.0000001658 62.0
BYD3_k127_2303336_71 Tetratricopeptide repeat - - - 0.0000002456 62.0
BYD3_k127_2303336_72 ABC-2 family transporter protein K01992 - - 0.0000004165 51.0
BYD3_k127_2303336_73 lysine biosynthesis protein LysW K05826 - - 0.00000089 51.0
BYD3_k127_2303336_74 Predicted membrane protein (DUF2085) - - - 0.00001318 59.0
BYD3_k127_2303336_75 PilZ domain - - - 0.0002491 51.0
BYD3_k127_2303336_8 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 8.723e-195 649.0
BYD3_k127_2303336_9 PFAM peptidase M3A and M3B thimet oligopeptidase F K08602 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 615.0
BYD3_k127_2320733_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000002055 191.0
BYD3_k127_2320733_1 Dehydrogenase - - - 0.0000000000000000000009996 107.0
BYD3_k127_2320733_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0000302,GO:0000988,GO:0000990,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009410,GO:0009605,GO:0009607,GO:0009628,GO:0009636,GO:0009889,GO:0010035,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0040007,GO:0042221,GO:0042493,GO:0042542,GO:0043207,GO:0043254,GO:0044087,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0046677,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0060255,GO:0065007,GO:0075136,GO:0080090,GO:0090034,GO:0097159,GO:0140110,GO:1901363,GO:1901700,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.00000000000001467 81.0
BYD3_k127_233090_0 cellulase activity - - - 7.364e-283 938.0
BYD3_k127_233090_1 Peptidase family M28 K05994 - 3.4.11.10 0.00000000000000000000000000000000000000000000000000000000000000000000007469 273.0
BYD3_k127_233090_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000001542 224.0
BYD3_k127_233090_3 COGs COG4935 Regulatory P domain of the subtilisin-like proprotein convertase and other protease K13735,K20276,K20755,K21449 - 3.4.21.121 0.00000000000000000000000000000000000000001986 179.0
BYD3_k127_233090_4 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.00000000000000000001509 109.0
BYD3_k127_233090_5 AIPR protein - - - 0.0002229 48.0
BYD3_k127_2337042_0 Belongs to the peptidase S8 family K17734 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001112 277.0
BYD3_k127_2337042_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K20276 - - 0.0000000000000000000000000000000000000000000005362 181.0
BYD3_k127_2343512_0 phosphatidate phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 416.0
BYD3_k127_2343512_1 Cupin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009982 391.0
BYD3_k127_2343512_2 bacterial OsmY and nodulation domain - - - 0.0000000000000000005094 93.0
BYD3_k127_2343512_3 response regulator, receiver K07315 - 3.1.3.3 0.0002198 51.0
BYD3_k127_2371669_0 COG0500 SAM-dependent methyltransferases K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002295 312.0
BYD3_k127_2371669_1 Peptidase, S41 - - - 0.00000000000000000000000000000000000000000000005203 174.0
BYD3_k127_2371669_2 PFAM regulatory protein, ArsR K03892 - - 0.00000000000000000000000000000005551 128.0
BYD3_k127_2371669_3 Methyltransferase domain - - - 0.0000000000000000000000005318 113.0
BYD3_k127_2376080_0 FecR protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009748 458.0
BYD3_k127_2376080_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000003165 213.0
BYD3_k127_2376080_2 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000378 156.0
BYD3_k127_2405677_0 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 428.0
BYD3_k127_2405677_1 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002837 286.0
BYD3_k127_2405677_2 Phage Tail Collar Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000004754 249.0
BYD3_k127_2405677_3 - - - - 0.000000000000000000005461 108.0
BYD3_k127_2405677_4 CotH kinase protein - - - 0.00000000000004328 85.0
BYD3_k127_2405677_5 Endonuclease I - - - 0.0000000007634 72.0
BYD3_k127_2405677_6 cellulase activity K18197 - 4.2.2.23 0.0000001519 64.0
BYD3_k127_241585_0 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 1.466e-233 734.0
BYD3_k127_2475117_0 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 446.0
BYD3_k127_2475117_1 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006229 326.0
BYD3_k127_2475117_2 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.000000000004152 66.0
BYD3_k127_2489812_0 OmpA family - - - 0.0 1978.0
BYD3_k127_2489812_1 Domain of unknown function DUF11 - - - 0.0 1411.0
BYD3_k127_2489812_10 - - - - 0.0000000000000000000000000000000000000000000000000008112 192.0
BYD3_k127_2489812_11 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000000000000000000000000000001643 186.0
BYD3_k127_2489812_12 MotA TolQ ExbB proton channel K03561,K03562 - - 0.000000000000000000000000000000000000000000003866 179.0
BYD3_k127_2489812_13 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000163 161.0
BYD3_k127_2489812_14 RNA recognition motif - - - 0.000000000000000000000000000006668 122.0
BYD3_k127_2489812_15 homoserine kinase type II (protein kinase fold) - - - 0.00000000000000000000000000002463 131.0
BYD3_k127_2489812_16 serine-type peptidase activity K04773 - - 0.00000000000000000000005589 111.0
BYD3_k127_2489812_17 Biopolymer transport protein K03560 - - 0.0000000000000000005062 92.0
BYD3_k127_2489812_18 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0023052,GO:0031224,GO:0031226,GO:0031647,GO:0031992,GO:0032991,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0065008,GO:0071944,GO:0098796,GO:0098797 - 0.000000000000002453 82.0
BYD3_k127_2489812_19 Alpha beta - - - 0.0000000000002142 80.0
BYD3_k127_2489812_2 Tetratricopeptide repeat - - - 6.199e-315 1001.0
BYD3_k127_2489812_20 - - - - 0.000000000001085 79.0
BYD3_k127_2489812_22 von Willebrand factor, type A K07114 - - 0.000004534 58.0
BYD3_k127_2489812_23 DNA helicase K03657 - 3.6.4.12 0.0002762 46.0
BYD3_k127_2489812_3 Tetratricopeptide repeat - - - 2.55e-210 682.0
BYD3_k127_2489812_4 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 595.0
BYD3_k127_2489812_5 COG0467 RecA-superfamily ATPases implicated in signal K08482 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 559.0
BYD3_k127_2489812_6 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 541.0
BYD3_k127_2489812_7 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007461 327.0
BYD3_k127_2489812_8 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005405 280.0
BYD3_k127_2489812_9 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000002652 195.0
BYD3_k127_2502114_0 Protein of unknown function, DUF255 K06888 - - 2.905e-211 676.0
BYD3_k127_2502114_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 548.0
BYD3_k127_2502114_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 299.0
BYD3_k127_2502114_3 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000142 283.0
BYD3_k127_2502114_4 hydrolase of the alpha beta-hydrolase fold K07019 GO:0003674,GO:0003824,GO:0006629,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0044237,GO:0044238,GO:0044255,GO:0050526,GO:0052689,GO:0071704 - 0.0000000000000000000000000000000001746 145.0
BYD3_k127_2502114_5 FR47-like protein K03829 - - 0.00000000000000000000000000000001711 128.0
BYD3_k127_2502114_6 Belongs to the short-chain dehydrogenases reductases (SDR) family K05886 - 1.1.1.276 0.0000000000000000000000000000002002 124.0
BYD3_k127_2502114_7 metal-dependent phosphohydrolase HD region - - - 0.00000000000000000000000001174 126.0
BYD3_k127_2502114_8 Transport and Golgi organisation 2 - - - 0.000000000000000000000001358 121.0
BYD3_k127_2520892_0 flavin-nucleotide-binding protein structurally related to pyridoxine 5-phosphate oxidase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004842 402.0
BYD3_k127_2520892_1 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 327.0
BYD3_k127_2520892_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000007628 263.0
BYD3_k127_2520892_3 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000004609 219.0
BYD3_k127_2520892_4 pyridoxamine 5-phosphate - - - 0.0000000000000000000000003598 110.0
BYD3_k127_2520892_5 Involved in the tonB-independent uptake of proteins - - - 0.000000000002451 70.0
BYD3_k127_2558544_0 Belongs to the carbamoyltransferase HypF family K04656 - - 1.443e-247 786.0
BYD3_k127_2558544_1 hydrogenase expression formation protein K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000437 537.0
BYD3_k127_2558544_2 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 424.0
BYD3_k127_2558544_3 serine-type peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 378.0
BYD3_k127_2558544_4 TIGRFAM Hydrogenase accessory protein HypB K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 335.0
BYD3_k127_2558544_5 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006339 315.0
BYD3_k127_2558544_6 ADP-glyceromanno-heptose 6-epimerase activity K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000000000000000003359 271.0
BYD3_k127_2558544_7 HupF/HypC family K04653 - - 0.0000000000000000006273 102.0
BYD3_k127_2558544_8 - - - - 0.00000000000002883 79.0
BYD3_k127_2558544_9 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.00001191 54.0
BYD3_k127_2602068_0 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 3.743e-214 688.0
BYD3_k127_2602068_1 Aldehyde dehydrogenase family K00128 - 1.2.1.3 6.931e-212 669.0
BYD3_k127_2602068_10 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000005799 235.0
BYD3_k127_2602068_11 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000005179 203.0
BYD3_k127_2602068_12 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000001859 149.0
BYD3_k127_2602068_13 alcohol dehydrogenase K13953 - 1.1.1.1 0.000000000000000000000000000000001844 133.0
BYD3_k127_2602068_14 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000577 146.0
BYD3_k127_2602068_15 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000001496 127.0
BYD3_k127_2602068_16 RESPONSE REGULATOR receiver - - - 0.0000000004444 65.0
BYD3_k127_2602068_2 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840,K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 625.0
BYD3_k127_2602068_3 Fumarase C C-terminus K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 595.0
BYD3_k127_2602068_4 Exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000717 389.0
BYD3_k127_2602068_5 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 396.0
BYD3_k127_2602068_6 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 372.0
BYD3_k127_2602068_7 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 328.0
BYD3_k127_2602068_8 histidine kinase A domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 320.0
BYD3_k127_2602068_9 cation diffusion facilitator family transporter K16264 GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000000001342 255.0
BYD3_k127_2613082_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1182.0
BYD3_k127_2613082_1 Sodium:solute symporter family K14393 - - 2.117e-236 741.0
BYD3_k127_2613082_10 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 323.0
BYD3_k127_2613082_11 PFAM SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 290.0
BYD3_k127_2613082_12 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006661 303.0
BYD3_k127_2613082_14 PFAM Phenazine biosynthesis PhzC PhzF protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007804 280.0
BYD3_k127_2613082_15 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003001 303.0
BYD3_k127_2613082_16 branched-chain amino acid transmembrane transporter activity K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002683 281.0
BYD3_k127_2613082_17 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000004062 278.0
BYD3_k127_2613082_18 Cell division ATP-binding protein ftsE K09811,K09812 GO:0000166,GO:0000287,GO:0000910,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007049,GO:0008144,GO:0008150,GO:0008356,GO:0009898,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019897,GO:0019898,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0030145,GO:0030554,GO:0031234,GO:0032153,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042173,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043937,GO:0043938,GO:0044085,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0046677,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1902531 - 0.0000000000000000000000000000000000000000000000000000000000000000000004374 263.0
BYD3_k127_2613082_19 sporulation resulting in formation of a cellular spore K06381 - - 0.00000000000000000000000000000000000000000000000000000000000003988 227.0
BYD3_k127_2613082_2 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005064 575.0
BYD3_k127_2613082_20 - - - - 0.000000000000000000000000000000000000000000000000000002464 208.0
BYD3_k127_2613082_21 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000004245 196.0
BYD3_k127_2613082_22 MotA TolQ ExbB proton channel K03561,K03562 - - 0.00000000000000000000000000000000000000000000000000005844 194.0
BYD3_k127_2613082_23 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000285 187.0
BYD3_k127_2613082_24 PFAM peptidase - - - 0.0000000000000000000000000000000000000000005835 167.0
BYD3_k127_2613082_25 haloacid dehalogenase K07025 - - 0.00000000000000000000000000000000000000002326 161.0
BYD3_k127_2613082_26 TIGRFAM hopanoid biosynthesis associated RND transporter like protein HpnN K07003 - - 0.0000000000000000000000000000000000000002073 173.0
BYD3_k127_2613082_27 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000005979 158.0
BYD3_k127_2613082_28 Sortase family K07284 - 3.4.22.70 0.00000000000000000000000000000000002044 146.0
BYD3_k127_2613082_29 Belongs to the ompA family - - - 0.00000000000000000000000000000000015 141.0
BYD3_k127_2613082_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 535.0
BYD3_k127_2613082_30 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.0000000000000000000000000000000003436 147.0
BYD3_k127_2613082_31 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000000000000001245 136.0
BYD3_k127_2613082_32 Protein of unknown function, DUF485 - - - 0.000000000000000000000000002864 115.0
BYD3_k127_2613082_33 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000002399 117.0
BYD3_k127_2613082_34 hyperosmotic response - - - 0.000000000000000000000227 110.0
BYD3_k127_2613082_35 - - - - 0.0000000000000000001935 105.0
BYD3_k127_2613082_36 Biopolymer transport protein K03560 - - 0.0000000000000000005861 93.0
BYD3_k127_2613082_37 - - - - 0.000000000000002321 87.0
BYD3_k127_2613082_38 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000001359 79.0
BYD3_k127_2613082_39 Tetratricopeptide repeat - - - 0.0000000000002391 82.0
BYD3_k127_2613082_4 Peptidase M16 inactive domain K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 519.0
BYD3_k127_2613082_40 Cytochrome C biogenesis protein - - - 0.0000000000003377 83.0
BYD3_k127_2613082_41 Tfp pilus assembly protein FimV - - - 0.0000000006687 70.0
BYD3_k127_2613082_42 Protein of unknown function (DUF1054) - - - 0.00000001323 65.0
BYD3_k127_2613082_43 Transcriptional regulatory protein, C terminal - - - 0.00000001728 67.0
BYD3_k127_2613082_44 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000003686 63.0
BYD3_k127_2613082_45 response regulator - - - 0.000001038 61.0
BYD3_k127_2613082_5 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 460.0
BYD3_k127_2613082_6 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 448.0
BYD3_k127_2613082_7 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 415.0
BYD3_k127_2613082_8 Branched-chain amino acid transport system / permease component K01997,K11960 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008365 320.0
BYD3_k127_2613082_9 Zn_pept - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 338.0
BYD3_k127_2615936_0 Pyruvate ferredoxin/flavodoxin oxidoreductase K00187 - 1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009256 614.0
BYD3_k127_2615936_1 Pyruvate:ferredoxin oxidoreductase core domain II K00186 - 1.2.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 590.0
BYD3_k127_2615936_2 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 477.0
BYD3_k127_2615936_3 - - - - 0.000000000000000000000000000000000000005078 153.0
BYD3_k127_2615936_4 methyltransferase - - - 0.0000000000000000000000000005074 126.0
BYD3_k127_2615936_5 PIN domain - - - 0.000000000000000000000003004 108.0
BYD3_k127_2615936_6 2-dehydro-3-deoxyphosphooctonate aldolase - - - 0.00000000000000000000246 99.0
BYD3_k127_2615936_7 PFAM SpoVT AbrB - - - 0.000000000002581 72.0
BYD3_k127_2615936_8 - - - - 0.00000000002629 70.0
BYD3_k127_2616772_0 Glutamine synthetase type III K01915 - 6.3.1.2 5.864e-303 947.0
BYD3_k127_2622247_0 Protein tyrosine kinase K12132 - 2.7.11.1 2.096e-194 638.0
BYD3_k127_2622247_1 Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 389.0
BYD3_k127_2622247_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006966 246.0
BYD3_k127_2622247_3 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000005656 173.0
BYD3_k127_2622247_4 RNA recognition motif - - - 0.000000000000000000000000000001186 124.0
BYD3_k127_2622247_5 Y_Y_Y domain - - - 0.00000000000000000000002366 117.0
BYD3_k127_2622247_6 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000002287 80.0
BYD3_k127_2622247_7 Parallel beta-helix repeats - - - 0.00002205 59.0
BYD3_k127_2622247_8 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0004357 50.0
BYD3_k127_2622868_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 5e-324 1004.0
BYD3_k127_2622868_1 glyoxalase bleomycin resistance protein dioxygenase K15975 - - 0.000000000000000000000000000000000000000000000000000000000001679 229.0
BYD3_k127_2622868_2 Peptidase family M1 domain K01992 - - 0.000000000000000000000000000000000000000000000000000000000003272 214.0
BYD3_k127_2622868_3 AAA domain - - - 0.000000000000000000000000000000000000000000000009832 187.0
BYD3_k127_2622868_5 guanyl-nucleotide exchange factor activity K02034 - - 0.0003385 53.0
BYD3_k127_2630468_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 3.578e-241 773.0
BYD3_k127_2630468_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 503.0
BYD3_k127_2630468_10 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000009342 258.0
BYD3_k127_2630468_11 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000001932 223.0
BYD3_k127_2630468_12 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000002076 231.0
BYD3_k127_2630468_13 Dihydroorotate dehydrogenase K02823 - - 0.0000000000000000000000000000000000000000000000000002037 197.0
BYD3_k127_2630468_14 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000001098 112.0
BYD3_k127_2630468_15 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.0000000000000000000001796 102.0
BYD3_k127_2630468_16 - - - - 0.00000000000000000001075 96.0
BYD3_k127_2630468_17 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000003987 94.0
BYD3_k127_2630468_18 SNARE associated Golgi protein - - - 0.0000000000000182 83.0
BYD3_k127_2630468_19 - - - - 0.00000839 48.0
BYD3_k127_2630468_2 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 522.0
BYD3_k127_2630468_20 TM2 domain - - - 0.0008415 53.0
BYD3_k127_2630468_3 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006902 484.0
BYD3_k127_2630468_4 ATPase with chaperone activity K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006134 481.0
BYD3_k127_2630468_5 SAICAR synthetase K01923,K13713 - 6.3.2.6,6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006654 383.0
BYD3_k127_2630468_6 aspartate ornithine carbamoyltransferase, carbamoyl-P binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 388.0
BYD3_k127_2630468_7 Catalyzes the conversion of dihydroorotate to orotate with NAD( ) as electron acceptor K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 368.0
BYD3_k127_2630468_8 Lytic transglycosylase catalytic K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 320.0
BYD3_k127_2630468_9 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003752 277.0
BYD3_k127_2701814_0 Pirin C-terminal cupin domain K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 536.0
BYD3_k127_2701814_1 PFAM Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 494.0
BYD3_k127_2701814_2 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000001626 185.0
BYD3_k127_2701814_3 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000001627 130.0
BYD3_k127_2701814_4 - - - - 0.00000000000000000000000000000005677 129.0
BYD3_k127_2701814_5 Lactoylglutathione lyase - - - 0.000000000004644 73.0
BYD3_k127_2710560_0 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009395 299.0
BYD3_k127_2710560_1 Transporter K03305 - - 0.000000000000000000000000000000000008333 139.0
BYD3_k127_2710560_2 nucleic-acid-binding protein contains PIN domain - - - 0.00000000000000000000000000000009188 129.0
BYD3_k127_2710560_3 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000009716 121.0
BYD3_k127_2710560_4 SpoVT / AbrB like domain - - - 0.0000000000000006731 84.0
BYD3_k127_2710560_5 - - - - 0.00000000002578 75.0
BYD3_k127_2710560_6 protein conserved in bacteria K15539 - - 0.0000000004706 71.0
BYD3_k127_2710560_7 Putative zinc-finger - - - 0.0000938 52.0
BYD3_k127_2722524_0 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.0 1078.0
BYD3_k127_2722524_1 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 383.0
BYD3_k127_2722524_2 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 402.0
BYD3_k127_2722524_3 Methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 375.0
BYD3_k127_2722524_4 Belongs to the RimK family K05844,K14940 - 6.3.2.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 347.0
BYD3_k127_2722524_5 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 292.0
BYD3_k127_2722524_6 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000000000002322 106.0
BYD3_k127_2722524_7 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000004508 61.0
BYD3_k127_2753729_0 Histidine kinase - - - 1.681e-234 735.0
BYD3_k127_2753729_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 9.768e-204 648.0
BYD3_k127_2753729_10 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 443.0
BYD3_k127_2753729_11 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 434.0
BYD3_k127_2753729_12 6-phosphofructokinase activity K00850,K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 404.0
BYD3_k127_2753729_13 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 404.0
BYD3_k127_2753729_14 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 398.0
BYD3_k127_2753729_15 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 414.0
BYD3_k127_2753729_16 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008572 379.0
BYD3_k127_2753729_17 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 368.0
BYD3_k127_2753729_18 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 367.0
BYD3_k127_2753729_19 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 373.0
BYD3_k127_2753729_2 Peptidase S46 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 578.0
BYD3_k127_2753729_20 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 361.0
BYD3_k127_2753729_21 Response regulator receiver modulated diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 343.0
BYD3_k127_2753729_22 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002059 281.0
BYD3_k127_2753729_23 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001327 275.0
BYD3_k127_2753729_24 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000003652 255.0
BYD3_k127_2753729_25 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000001568 255.0
BYD3_k127_2753729_26 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000003705 232.0
BYD3_k127_2753729_27 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000001543 238.0
BYD3_k127_2753729_28 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000006914 220.0
BYD3_k127_2753729_29 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000000004801 201.0
BYD3_k127_2753729_3 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000778 537.0
BYD3_k127_2753729_30 Protein of unknown function (DUF2785) - - - 0.0000000000000000000000000000000000000000000000000003873 195.0
BYD3_k127_2753729_31 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000002044 206.0
BYD3_k127_2753729_32 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000000000006046 188.0
BYD3_k127_2753729_33 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000001103 177.0
BYD3_k127_2753729_34 FAD binding domain K21401 - 1.3.99.38 0.0000000000000000000000000000000000000000008653 173.0
BYD3_k127_2753729_35 pyruvate phosphate dikinase, PEP K01007,K21787 - 2.7.9.2 0.00000000000000000000000000000000000000005779 175.0
BYD3_k127_2753729_36 Low affinity iron permease - - - 0.0000000000000000000000000000000000000129 149.0
BYD3_k127_2753729_37 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.00000000000000000000000000000000000004819 153.0
BYD3_k127_2753729_38 domain, Protein - - - 0.0000000000000000000000000000000000002366 162.0
BYD3_k127_2753729_39 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000008078 149.0
BYD3_k127_2753729_4 Phospholipase D Transphosphatidylase K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006513 529.0
BYD3_k127_2753729_40 glycosyl transferase family 39 K00721 - 2.4.1.83 0.000000000000000000000000000000000002138 161.0
BYD3_k127_2753729_41 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000003482 136.0
BYD3_k127_2753729_42 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000007499 142.0
BYD3_k127_2753729_43 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000000007829 145.0
BYD3_k127_2753729_44 Lipid A Biosynthesis - - - 0.0000000000000000000000000003396 117.0
BYD3_k127_2753729_45 ECF sigma factor K03088 GO:0001101,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042221,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.0000000000000000000018 109.0
BYD3_k127_2753729_46 Phospholipid methyltransferase - - - 0.000000000000000000002434 104.0
BYD3_k127_2753729_47 4Fe-4S binding domain K02574 - - 0.00000000000000003141 96.0
BYD3_k127_2753729_48 serine threonine protein kinase - - - 0.00000000000009391 84.0
BYD3_k127_2753729_49 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.0000000000001325 85.0
BYD3_k127_2753729_5 Belongs to the glycosyl hydrolase 57 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 507.0
BYD3_k127_2753729_50 LuxR family transcriptional regulator - - - 0.0000000000005101 76.0
BYD3_k127_2753729_51 serine threonine protein kinase - - - 0.000000000001948 78.0
BYD3_k127_2753729_52 Tetratricopeptide repeat - - - 0.000009259 59.0
BYD3_k127_2753729_53 Integral membrane protein CcmA involved in cell shape determination - - - 0.0003471 53.0
BYD3_k127_2753729_6 Mur ligase middle domain K02558 - 6.3.2.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 488.0
BYD3_k127_2753729_7 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 475.0
BYD3_k127_2753729_8 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005057 464.0
BYD3_k127_2753729_9 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 465.0
BYD3_k127_2757842_0 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 595.0
BYD3_k127_2757842_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008884 569.0
BYD3_k127_2757842_10 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000003548 230.0
BYD3_k127_2757842_11 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000001654 231.0
BYD3_k127_2757842_12 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000001495 225.0
BYD3_k127_2757842_13 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000001517 208.0
BYD3_k127_2757842_14 Cytochrome C assembly protein K02195 - - 0.000000000000000000000000000000000000000000000000004713 199.0
BYD3_k127_2757842_15 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000001166 179.0
BYD3_k127_2757842_16 GTP cyclohydrolase K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000006384 178.0
BYD3_k127_2757842_17 Calcineurin-like phosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000001211 189.0
BYD3_k127_2757842_18 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000002064 169.0
BYD3_k127_2757842_19 Domain of unknown function (DUF4388) K03413 - - 0.000000000000000000000000000000005635 149.0
BYD3_k127_2757842_2 Cytochrome c-type biogenesis protein CcmF C-terminal K02198 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 552.0
BYD3_k127_2757842_20 Peptidase MA superfamily - - - 0.0000000000000000000000000000003405 141.0
BYD3_k127_2757842_21 CcmB protein K02194 - - 0.0000000000000000000000000000005988 132.0
BYD3_k127_2757842_22 Alpha beta - - - 0.000000000000000000000000001187 129.0
BYD3_k127_2757842_23 Glutathione peroxidase K02199 - - 0.0000000000000000000000003452 111.0
BYD3_k127_2757842_24 heat shock protein binding K05516,K05801 - - 0.00000000000000000000001962 117.0
BYD3_k127_2757842_25 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000002443 102.0
BYD3_k127_2757842_26 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000001785 97.0
BYD3_k127_2757842_27 Possible lysine decarboxylase - - - 0.0000000000000003783 93.0
BYD3_k127_2757842_28 subunit of a heme lyase K02200 - - 0.000000000005629 73.0
BYD3_k127_2757842_29 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000007659 74.0
BYD3_k127_2757842_3 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003363 436.0
BYD3_k127_2757842_30 - - - - 0.0000001656 58.0
BYD3_k127_2757842_4 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005617 411.0
BYD3_k127_2757842_5 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 323.0
BYD3_k127_2757842_6 UbiA prenyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008177 281.0
BYD3_k127_2757842_7 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002566 288.0
BYD3_k127_2757842_8 Asparaginase glutaminase K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000001031 255.0
BYD3_k127_2757842_9 Stage II sporulation protein K06381 - - 0.0000000000000000000000000000000000000000000000000000000000000003841 249.0
BYD3_k127_282002_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 439.0
BYD3_k127_282002_1 Beta-lactamase superfamily domain - - - 0.000003781 49.0
BYD3_k127_2888083_0 Domain of unknown function (DUF4143) - - - 0.000000000000000000000000000000000008379 137.0
BYD3_k127_2888083_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000007446 154.0
BYD3_k127_2888083_2 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000001732 100.0
BYD3_k127_2888083_3 COG2931, RTX toxins and related Ca2 -binding proteins K01406 - 3.4.24.40 0.00001781 51.0
BYD3_k127_2905698_0 Metal binding domain of Ada K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 346.0
BYD3_k127_2905698_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000002787 241.0
BYD3_k127_2905698_2 - - - - 0.0000000000000000000000000000000000000000002364 173.0
BYD3_k127_2905698_3 - - - - 0.000000000000000000000000000003139 133.0
BYD3_k127_2905698_4 Belongs to the acetyltransferase family. ArgA subfamily - - - 0.000000000000000000000003405 121.0
BYD3_k127_2905698_5 PFAM Histidine triad (HIT) protein K02503 - - 0.000000000000000000004312 93.0
BYD3_k127_2905698_6 TIGRFAM TonB K03832 - - 0.000000000000001753 90.0
BYD3_k127_2923708_0 Glycosyltransferase Family 4 - - - 0.0 1185.0
BYD3_k127_2923708_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 605.0
BYD3_k127_2923708_2 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 296.0
BYD3_k127_2923708_3 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000436 257.0
BYD3_k127_2923708_4 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella - - - 0.0000000000000000000000000000000003712 139.0
BYD3_k127_2923708_5 transcription activator, effector binding K13652 - - 0.00000000000000000002377 101.0
BYD3_k127_2923708_6 SRPBCC superfamily protein - - - 0.000000000000004776 86.0
BYD3_k127_2923708_7 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000001641 62.0
BYD3_k127_2948291_0 metalloendopeptidase activity K01283 - 3.4.15.1 1.145e-242 763.0
BYD3_k127_2948291_1 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 566.0
BYD3_k127_2948291_10 Domain of unknown function (DUF4129) - - - 0.000000000000000000000000000000000000000000000000000000000001866 232.0
BYD3_k127_2948291_11 membrane protein domain - - - 0.000000000000000000000000000000000000000000000000000000000006164 216.0
BYD3_k127_2948291_12 Penicillin binding protein transpeptidase domain - - - 0.0000000000000000000000000000000000000000000000000000000003506 213.0
BYD3_k127_2948291_13 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000006031 189.0
BYD3_k127_2948291_14 Metallopeptidase family M24 K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000007431 188.0
BYD3_k127_2948291_15 META domain K03929 - - 0.000000000000000000000000000000000000000000004135 172.0
BYD3_k127_2948291_16 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000005376 154.0
BYD3_k127_2948291_17 Domain of unknown function (DUF4350) - - - 0.000000000000000000000000000000005482 149.0
BYD3_k127_2948291_18 - - - - 0.00000000000000000000000000003328 118.0
BYD3_k127_2948291_19 - - - - 0.0000000000000000000000000002444 116.0
BYD3_k127_2948291_2 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 506.0
BYD3_k127_2948291_20 methylated DNA-protein cysteine methyltransferase K07443 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0005488,GO:0005515,GO:0019899,GO:0097159,GO:1901363 - 0.0000000000000000003934 93.0
BYD3_k127_2948291_21 - - - - 0.0000000000000009718 85.0
BYD3_k127_2948291_23 Redoxin domain protein - - - 0.00000000001334 74.0
BYD3_k127_2948291_24 Rhomboid-like protease - - - 0.000000000264 75.0
BYD3_k127_2948291_25 Thioesterase superfamily - - - 0.0000000003557 68.0
BYD3_k127_2948291_3 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062 398.0
BYD3_k127_2948291_4 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009376 417.0
BYD3_k127_2948291_5 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 302.0
BYD3_k127_2948291_6 Mechanosensitive ion channel K05802 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002541 289.0
BYD3_k127_2948291_7 Stage II sporulation protein M - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005068 265.0
BYD3_k127_2948291_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000001871 220.0
BYD3_k127_2948291_9 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000005987 214.0
BYD3_k127_2973381_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 334.0
BYD3_k127_2973381_1 Nucleotidyl transferase K00966,K16881 - 2.7.7.13,5.4.2.8 0.000000000000000000000000000000000000000000000000000000296 213.0
BYD3_k127_2973381_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000003689 208.0
BYD3_k127_2973381_3 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000009416 179.0
BYD3_k127_2973381_4 creatininase K01470 - 3.5.2.10 0.000000000000000000000000000355 132.0
BYD3_k127_2973381_5 CYTH K05873 - 4.6.1.1 0.000000000000000000001823 110.0
BYD3_k127_2977788_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0 1365.0
BYD3_k127_2977788_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1020.0
BYD3_k127_2977788_10 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 394.0
BYD3_k127_2977788_11 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 369.0
BYD3_k127_2977788_12 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 341.0
BYD3_k127_2977788_13 Endonuclease exonuclease phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 294.0
BYD3_k127_2977788_14 Amidinotransferase K01478 - 3.5.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000001974 282.0
BYD3_k127_2977788_15 aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006508 271.0
BYD3_k127_2977788_16 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001894 268.0
BYD3_k127_2977788_17 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000001755 262.0
BYD3_k127_2977788_18 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001607 259.0
BYD3_k127_2977788_19 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000007419 217.0
BYD3_k127_2977788_2 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 1.532e-259 805.0
BYD3_k127_2977788_20 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000000000000000001373 188.0
BYD3_k127_2977788_21 Diacylglycerol kinase K07029 GO:0003674,GO:0003824,GO:0004143,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.107 0.00000000000000000000000000000000000000000000001584 186.0
BYD3_k127_2977788_22 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488,K13819 - - 0.0000000000000000000000000000000000000000000003647 188.0
BYD3_k127_2977788_23 transcriptional regulator, Rrf2 family - - - 0.0000000000000000000000000000000000001678 145.0
BYD3_k127_2977788_24 bleomycin resistance protein - - - 0.000000000000000000000000000000000005281 141.0
BYD3_k127_2977788_25 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 - 3.4.16.4 0.00000000000000000000000000000000001042 153.0
BYD3_k127_2977788_26 - - - - 0.0000000000000000000000000000000001313 139.0
BYD3_k127_2977788_27 PaaD-like protein - - - 0.000000000000000000000000000000008696 141.0
BYD3_k127_2977788_28 S1/P1 Nuclease - - - 0.000000000000000000000000000000194 134.0
BYD3_k127_2977788_29 RNA-DNA hybrid ribonuclease activity K03470,K03471 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000006392 142.0
BYD3_k127_2977788_3 Prolyl oligopeptidase K01322 - 3.4.21.26 1.905e-224 728.0
BYD3_k127_2977788_30 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000003022 126.0
BYD3_k127_2977788_31 Radical SAM superfamily K06941 - 2.1.1.192 0.000000000000000000000000002967 124.0
BYD3_k127_2977788_33 Outer membrane efflux protein - - - 0.000000000000000009889 96.0
BYD3_k127_2977788_34 Belongs to the BolA IbaG family - - - 0.000000000000001388 79.0
BYD3_k127_2977788_35 BNR Asp-box repeat - - - 0.00001996 51.0
BYD3_k127_2977788_36 Domain of unknown function (DUF5107) - - - 0.0009151 52.0
BYD3_k127_2977788_4 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 532.0
BYD3_k127_2977788_5 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 535.0
BYD3_k127_2977788_6 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006359 520.0
BYD3_k127_2977788_7 HI0933-like protein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 430.0
BYD3_k127_2977788_8 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287 398.0
BYD3_k127_2977788_9 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006983 397.0
BYD3_k127_2979108_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 3.054e-201 653.0
BYD3_k127_2979108_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 520.0
BYD3_k127_2979108_10 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 310.0
BYD3_k127_2979108_11 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000157 298.0
BYD3_k127_2979108_12 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000001675 282.0
BYD3_k127_2979108_13 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001287 263.0
BYD3_k127_2979108_14 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000002163 230.0
BYD3_k127_2979108_15 Histidine kinase K02668,K07710 - 2.7.13.3 0.0000000000000000000000000000000000000000006591 175.0
BYD3_k127_2979108_16 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000002012 157.0
BYD3_k127_2979108_17 cheY-homologous receiver domain - - - 0.00000000000000001289 89.0
BYD3_k127_2979108_18 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives K02343 - 2.7.7.7 0.0000000000000004073 91.0
BYD3_k127_2979108_19 Essential cell division protein K03589 - - 0.0000000000001331 85.0
BYD3_k127_2979108_2 Winged helix DNA-binding domain K09927 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 465.0
BYD3_k127_2979108_20 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000595 68.0
BYD3_k127_2979108_21 transcriptional regulator, SARP family - - - 0.00000521 59.0
BYD3_k127_2979108_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 470.0
BYD3_k127_2979108_4 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 418.0
BYD3_k127_2979108_5 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 424.0
BYD3_k127_2979108_6 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007125 409.0
BYD3_k127_2979108_7 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 408.0
BYD3_k127_2979108_8 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 380.0
BYD3_k127_2979108_9 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 353.0
BYD3_k127_2984511_0 phosphorelay signal transduction system K02481,K07713,K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000989 528.0
BYD3_k127_2984511_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000718 346.0
BYD3_k127_2984511_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007072 331.0
BYD3_k127_2984511_3 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000004823 155.0
BYD3_k127_2984511_4 Peptidase family M54 K06974 - - 0.00000000000000000000000000000000000009644 149.0
BYD3_k127_2984511_5 ribosomal large subunit export from nucleus - - - 0.0000000000000000000000000000001425 134.0
BYD3_k127_2984511_6 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000000000000000008488 98.0
BYD3_k127_2984511_7 Xylose isomerase-like TIM barrel - - - 0.000000002251 70.0
BYD3_k127_3014816_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 3.042e-248 786.0
BYD3_k127_3014816_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 1.431e-221 701.0
BYD3_k127_3014816_10 Secretin and TonB N terminus short domain K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006307 387.0
BYD3_k127_3014816_11 pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005778 335.0
BYD3_k127_3014816_12 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006603 298.0
BYD3_k127_3014816_13 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000797 268.0
BYD3_k127_3014816_14 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000001318 147.0
BYD3_k127_3014816_15 Thioesterase superfamily - - - 0.000000000000000000000000000000000001177 144.0
BYD3_k127_3014816_16 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000001838 147.0
BYD3_k127_3014816_17 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000001696 135.0
BYD3_k127_3014816_18 Preprotein translocase subunit K03210 - - 0.000000000000000000000002898 106.0
BYD3_k127_3014816_19 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000002397 107.0
BYD3_k127_3014816_2 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 2.921e-197 642.0
BYD3_k127_3014816_20 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000008932 115.0
BYD3_k127_3014816_21 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000006024 89.0
BYD3_k127_3014816_22 Tetratricopeptide repeat - - - 0.000000000002093 80.0
BYD3_k127_3014816_23 Fimbrial assembly protein (PilN) K02663 - - 0.00000000001826 73.0
BYD3_k127_3014816_24 iron ion homeostasis K03709,K04758 - - 0.0000000002954 67.0
BYD3_k127_3014816_25 Prokaryotic N-terminal methylation motif - - - 0.0000000003247 70.0
BYD3_k127_3014816_26 O-Antigen ligase - - - 0.00000007127 65.0
BYD3_k127_3014816_28 O-Antigen ligase - - - 0.00001174 59.0
BYD3_k127_3014816_3 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 615.0
BYD3_k127_3014816_4 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008295 628.0
BYD3_k127_3014816_5 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000344 544.0
BYD3_k127_3014816_6 Type II secretion system (T2SS), protein F K02455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 465.0
BYD3_k127_3014816_7 two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 456.0
BYD3_k127_3014816_8 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005655 398.0
BYD3_k127_3014816_9 Ribonuclease E/G family K08300,K08301 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008996,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006283 392.0
BYD3_k127_3021329_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 602.0
BYD3_k127_3021329_1 Thrombospondin type 3 repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003152 259.0
BYD3_k127_3021329_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000000000000000000000007299 241.0
BYD3_k127_3021329_4 Belongs to the ompA family K03286 - - 0.0000000000000002944 79.0
BYD3_k127_3021329_5 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K05970 - 3.1.1.53 0.000000000009742 79.0
BYD3_k127_3021329_6 Kelch motif K20285 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0010008,GO:0012505,GO:0016020,GO:0031090,GO:0031410,GO:0031982,GO:0043226,GO:0043227,GO:0043229,GO:0044422,GO:0044424,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0097708,GO:0098588,GO:0098805 - 0.0000000125 69.0
BYD3_k127_3021329_7 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000125 69.0
BYD3_k127_3035515_0 Peptidase family M3 K01284 - 3.4.15.5 3.611e-279 876.0
BYD3_k127_3035515_1 Bacterial regulatory protein, Fis family K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 441.0
BYD3_k127_3035515_10 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000001747 210.0
BYD3_k127_3035515_11 peptidase activity - - - 0.000000000000000000000000000000231 143.0
BYD3_k127_3035515_12 Transglutaminase-like superfamily - - - 0.000000000000000000002829 106.0
BYD3_k127_3035515_13 translation initiation factor activity K06996 - - 0.00000000000000001381 88.0
BYD3_k127_3035515_14 Sulfate permease family K03321 - - 0.00000000002801 65.0
BYD3_k127_3035515_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 365.0
BYD3_k127_3035515_3 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005943 370.0
BYD3_k127_3035515_4 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 368.0
BYD3_k127_3035515_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 327.0
BYD3_k127_3035515_6 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 321.0
BYD3_k127_3035515_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 299.0
BYD3_k127_3035515_8 Belongs to the UPF0173 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001479 253.0
BYD3_k127_3035515_9 succinate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001174 265.0
BYD3_k127_3048334_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.909e-241 757.0
BYD3_k127_3048334_1 Polysulphide reductase, NrfD K00185 - - 2.428e-232 726.0
BYD3_k127_3048334_10 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000009159 210.0
BYD3_k127_3048334_11 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000005303 124.0
BYD3_k127_3048334_12 COG1845 Heme copper-type cytochrome quinol oxidase subunit K02276 - 1.9.3.1 0.00000000000000000000007297 109.0
BYD3_k127_3048334_13 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.00000000000000003564 85.0
BYD3_k127_3048334_14 - - - - 0.0000003074 56.0
BYD3_k127_3048334_15 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.00000128 54.0
BYD3_k127_3048334_2 Cytochrome C and Quinol oxidase polypeptide I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 535.0
BYD3_k127_3048334_3 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009867 370.0
BYD3_k127_3048334_4 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 335.0
BYD3_k127_3048334_5 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000126 258.0
BYD3_k127_3048334_6 signal sequence binding K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001571 256.0
BYD3_k127_3048334_7 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000001346 243.0
BYD3_k127_3048334_8 Heme copper-type cytochrome quinol oxidase, subunit K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000005741 241.0
BYD3_k127_3048334_9 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000000000000000000000003978 197.0
BYD3_k127_3109391_0 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 595.0
BYD3_k127_3109391_1 RESPONSE REGULATOR receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 531.0
BYD3_k127_3109391_2 AAA domain K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 386.0
BYD3_k127_3109391_3 Glutamine cyclotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008541 383.0
BYD3_k127_3109391_4 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 356.0
BYD3_k127_3109391_5 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 349.0
BYD3_k127_3109391_6 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006154 280.0
BYD3_k127_3109391_7 glyoxalase III activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002661 252.0
BYD3_k127_3109391_8 protein possibly involved in aromatic compounds catabolism - - - 0.00000000000000000000000000000000000000001845 167.0
BYD3_k127_3109391_9 COG1845 Heme copper-type cytochrome quinol oxidase subunit K02276 - 1.9.3.1 0.0000000002382 69.0
BYD3_k127_3167213_0 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008141 438.0
BYD3_k127_3167213_1 Protein of unknown function (DUF3300) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007593 418.0
BYD3_k127_3167213_2 Protein of unknown function (DUF2950) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 376.0
BYD3_k127_3167213_3 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000001152 199.0
BYD3_k127_3167213_4 - - - - 0.000000000000000003757 93.0
BYD3_k127_3167213_5 - - - - 0.0000000000000004335 92.0
BYD3_k127_3167213_6 Outer membrane protein beta-barrel domain - - - 0.0000000001919 72.0
BYD3_k127_3167213_7 - - - - 0.0000000008566 63.0
BYD3_k127_3167496_0 cobalamin-transporting ATPase activity K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 508.0
BYD3_k127_3167496_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008807 428.0
BYD3_k127_3167496_2 CHAT domain - - - 0.00000000000000003375 97.0
BYD3_k127_3167496_3 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin K08651,K14645 - 3.4.21.66 0.000000000000002147 90.0
BYD3_k127_3167496_4 - - - - 0.0000000000000128 73.0
BYD3_k127_3167496_5 phosphoserine phosphatase K01079 GO:0003674,GO:0003824,GO:0004647,GO:0004721,GO:0004722,GO:0005488,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016597,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0031406,GO:0036094,GO:0036211,GO:0040007,GO:0042578,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 3.1.3.3 0.0000001733 57.0
BYD3_k127_3175579_0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase - - - 0.0 1349.0
BYD3_k127_3175579_1 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009006 376.0
BYD3_k127_3175579_10 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000004127 205.0
BYD3_k127_3175579_11 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.00000000000000000000000000000000000000000000000003936 187.0
BYD3_k127_3175579_12 - - - - 0.00000000000000000000000000000000000000001851 171.0
BYD3_k127_3175579_13 EamA-like transporter family - - - 0.000000000000000000000000000000000007221 148.0
BYD3_k127_3175579_14 Exodeoxyribonuclease III - - - 0.000000000000000000000000000002819 130.0
BYD3_k127_3175579_15 PFAM ATP-binding region, ATPase domain protein K02482,K10819 - 2.7.13.3 0.00000000000000000000000000002035 137.0
BYD3_k127_3175579_16 cheY-homologous receiver domain K07658 - - 0.000000000000000007716 97.0
BYD3_k127_3175579_17 PFAM response regulator receiver - - - 0.00000000000000001753 96.0
BYD3_k127_3175579_18 Thioredoxin-like - - - 0.000000004609 59.0
BYD3_k127_3175579_2 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003808 315.0
BYD3_k127_3175579_3 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 317.0
BYD3_k127_3175579_4 Oxidoreductase NAD-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007027 309.0
BYD3_k127_3175579_5 Amidinotransferase K01482 - 3.5.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 287.0
BYD3_k127_3175579_6 Belongs to the NiFe NiFeSe hydrogenase large subunit family K14126,K17993 GO:0003674,GO:0005488,GO:0005575,GO:0016151,GO:0032991,GO:0043167,GO:0043169,GO:0044569,GO:0046872,GO:0046914,GO:1902494 1.12.1.3,1.12.1.5,1.8.98.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000601 311.0
BYD3_k127_3175579_7 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009621 288.0
BYD3_k127_3175579_8 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006521 276.0
BYD3_k127_3175579_9 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000005159 267.0
BYD3_k127_3216488_0 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000001682 168.0
BYD3_k127_3216488_1 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000001469 160.0
BYD3_k127_3252149_0 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 604.0
BYD3_k127_3252149_1 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 356.0
BYD3_k127_3252149_2 Short-chain dehydrogenase reductase sdr - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 310.0
BYD3_k127_3252149_3 - - - - 0.000000000000000000000000000000000000000000000000002621 186.0
BYD3_k127_3252149_4 Protein-disulfide isomerase - - - 0.000000000000000000000000000000000000000000000002764 177.0
BYD3_k127_3252149_5 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000007325 149.0
BYD3_k127_3252149_6 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000002471 153.0
BYD3_k127_3252149_7 FG-GAP repeat - - - 0.0000000000000000000002968 111.0
BYD3_k127_3252149_8 - - - - 0.00000000000001138 82.0
BYD3_k127_3272862_0 Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 0.0 1069.0
BYD3_k127_3272862_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 1.663e-302 940.0
BYD3_k127_3272862_10 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 333.0
BYD3_k127_3272862_11 ABC-2 family transporter protein K19341 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 295.0
BYD3_k127_3272862_12 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000229 273.0
BYD3_k127_3272862_13 lipoprotein involved in nitrous oxide reduction - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003862 250.0
BYD3_k127_3272862_14 Tetratricopeptide repeat K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000002201 221.0
BYD3_k127_3272862_15 Menaquinol oxidoreductase complex Cbc4, cytochrome c subunit - - - 0.0000000000000000000000000000000000000842 147.0
BYD3_k127_3272862_16 lipoprotein involved in nitrous oxide reduction K19342 - - 0.000000000000000000000000000000000008582 148.0
BYD3_k127_3272862_17 helix_turn_helix, cAMP Regulatory protein K21564 - - 0.000000000000000000000000000000008945 136.0
BYD3_k127_3272862_18 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000002884 134.0
BYD3_k127_3272862_19 Two component regulator propeller - - - 0.000000000000000000003945 99.0
BYD3_k127_3272862_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 3.866e-219 686.0
BYD3_k127_3272862_3 Penicillin amidase K01434 - 3.5.1.11 1.611e-217 721.0
BYD3_k127_3272862_4 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000665 607.0
BYD3_k127_3272862_5 Periplasmic copper-binding protein (NosD) K07218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 602.0
BYD3_k127_3272862_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 541.0
BYD3_k127_3272862_7 ABC transporter K01990,K19340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 359.0
BYD3_k127_3272862_8 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 348.0
BYD3_k127_3272862_9 transcription factor binding K02584,K11914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 377.0
BYD3_k127_3290619_0 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 366.0
BYD3_k127_3290619_1 Haem-binding domain - - - 0.000000000000000000000000000000001014 145.0
BYD3_k127_3290619_2 - - - - 0.00000000008134 69.0
BYD3_k127_3290619_3 Belongs to the peptidase S8 family - - - 0.000001531 59.0
BYD3_k127_329784_0 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 391.0
BYD3_k127_329784_1 Transposase IS116/IS110/IS902 family K07486 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 325.0
BYD3_k127_329784_2 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000002471 119.0
BYD3_k127_329784_3 Carboxylesterase family - - - 0.000000000000000000002005 96.0
BYD3_k127_3306837_0 PFAM glycosyl transferase family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 352.0
BYD3_k127_3306837_1 Glycosyltransferase like family 2 K20534 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 344.0
BYD3_k127_3306837_2 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000004386 132.0
BYD3_k127_3306837_3 Sigma factor PP2C-like phosphatases - - - 0.00000000000002052 79.0
BYD3_k127_3306837_4 COG2303 Choline dehydrogenase and related flavoproteins - - - 0.000000005616 69.0
BYD3_k127_3306837_5 PFAM glycosyl transferase family 39 K00728 - 2.4.1.109 0.000008512 58.0
BYD3_k127_3316110_0 BNR Asp-box repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 557.0
BYD3_k127_3316110_1 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 548.0
BYD3_k127_3316110_10 Domain of unknown function (DUF4442) - - - 0.000000000000000000000004299 104.0
BYD3_k127_3316110_11 Helix-turn-helix domain - - - 0.0000000000068 76.0
BYD3_k127_3316110_12 Epidermal growth factor-like domain. - - - 0.0000006999 59.0
BYD3_k127_3316110_2 - K01286 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 481.0
BYD3_k127_3316110_3 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000011 274.0
BYD3_k127_3316110_4 Protein of unknown function (DUF2914) - - - 0.000000000000000000000000000000000000000000000000000000000001096 223.0
BYD3_k127_3316110_5 6-phosphogluconolactonase activity - - - 0.00000000000000000000000000000000000000000000003941 196.0
BYD3_k127_3316110_6 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.0000000000000000000000000000000000000000008148 176.0
BYD3_k127_3316110_7 - - - - 0.0000000000000000000000000000000000000001647 162.0
BYD3_k127_3316110_8 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000154 130.0
BYD3_k127_3316110_9 Von Willebrand factor A - - - 0.00000000000000000000000000001148 138.0
BYD3_k127_3323518_0 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 351.0
BYD3_k127_3323518_1 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation K07130 GO:0003674,GO:0003824,GO:0004061,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043167,GO:0043169,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.0000000000000000000000000000000000000000000000000414 188.0
BYD3_k127_3323518_2 FAD binding domain K00486 - 1.14.13.9 0.000000000000000000000002702 106.0
BYD3_k127_3336381_0 cellulase activity - - - 0.0000000000000000000003771 108.0
BYD3_k127_3336381_1 Leucine-rich repeat (LRR) protein - - - 0.000000006921 69.0
BYD3_k127_3356674_0 Amidohydrolase family K06015 - 3.5.1.81 5.498e-227 719.0
BYD3_k127_3356674_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000409 479.0
BYD3_k127_3356674_2 lipoprotein localization to outer membrane K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005536 462.0
BYD3_k127_3356674_3 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 367.0
BYD3_k127_3356674_4 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009376 375.0
BYD3_k127_3356674_5 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 353.0
BYD3_k127_3356674_6 phosphorelay sensor kinase activity K02478,K07704 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031224,GO:0031226,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0035556,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070887,GO:0071496,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.00000000000000000000000000000000000000000000001492 192.0
BYD3_k127_3356674_7 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000006121 171.0
BYD3_k127_3356674_8 LytTr DNA-binding domain K08083 - - 0.0000000000000000000000000006454 132.0
BYD3_k127_3378024_0 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 415.0
BYD3_k127_3378024_1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00303 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005347 358.0
BYD3_k127_3378024_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0000988,GO:0000990,GO:0002791,GO:0003674,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032879,GO:0032880,GO:0043254,GO:0044087,GO:0044419,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051223,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070201,GO:0080090,GO:0090087,GO:0140110,GO:1903506,GO:1903530,GO:2000112,GO:2000142,GO:2001141 - 0.0000009202 58.0
BYD3_k127_3378024_2 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001689 279.0
BYD3_k127_3378024_3 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000003248 230.0
BYD3_k127_3378024_4 Putative stress-induced transcription regulator - - - 0.000000000000000000000000000000000000000000000006212 179.0
BYD3_k127_3378024_5 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000002481 187.0
BYD3_k127_3378024_6 electron transfer activity - - - 0.0000000000000000000000000000000000000000000002492 190.0
BYD3_k127_3378024_7 cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000009652 166.0
BYD3_k127_3378024_9 AlkA N-terminal domain K13529,K13530 - 3.2.2.21 0.000000001838 68.0
BYD3_k127_3382411_0 PFAM ribonuclease II K01147 - 3.1.13.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 573.0
BYD3_k127_3382411_2 - - - - 0.000000000000000000000000000000000000000000000002337 192.0
BYD3_k127_3382411_3 response to abiotic stimulus K06867 - - 0.000000000000000000000000008503 117.0
BYD3_k127_3382411_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000002306 89.0
BYD3_k127_3382411_5 Domain of unknown function (DUF4382) - - - 0.000000000000001307 91.0
BYD3_k127_3382411_6 - - - - 0.000000000000006529 87.0
BYD3_k127_3382411_7 - - - - 0.00000008049 58.0
BYD3_k127_3386732_0 beta-glucosidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 394.0
BYD3_k127_3386732_1 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006452 396.0
BYD3_k127_3386732_2 DNA topoisomerase type I activity K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 369.0
BYD3_k127_3386732_3 Late embryogenesis abundant protein - - - 0.000000000000000005705 94.0
BYD3_k127_3386732_4 CsbD-like - - - 0.00000000000003995 84.0
BYD3_k127_3398532_0 TPR repeat-containing protein - - - 0.0000000000000007252 89.0
BYD3_k127_3398532_1 PBS lyase HEAT domain protein repeat-containing protein - - - 0.000000000003154 79.0
BYD3_k127_3430662_0 cellulose binding - - - 0.0 1279.0
BYD3_k127_3430662_1 nickel-dependent hydrogenase, large subunit K06281 - 1.12.99.6 6.657e-278 864.0
BYD3_k127_3430662_2 Thrombospondin type 3 repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009131 562.0
BYD3_k127_3430662_3 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282,K18008 - 1.12.2.1,1.12.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 521.0
BYD3_k127_3430662_4 PFAM Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 372.0
BYD3_k127_3430662_5 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 340.0
BYD3_k127_3430662_6 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.0000000000000000000000000000000000000000000000004067 182.0
BYD3_k127_3430662_7 Cytochrome C biogenesis protein transmembrane region - - - 0.0000000000000000000000000000000000000000000001817 183.0
BYD3_k127_3449645_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1955.0
BYD3_k127_3449645_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1840.0
BYD3_k127_3449645_10 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000004642 60.0
BYD3_k127_3449645_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006584 313.0
BYD3_k127_3449645_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005102 285.0
BYD3_k127_3449645_4 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000001335 242.0
BYD3_k127_3449645_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000000008778 214.0
BYD3_k127_3449645_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000328 158.0
BYD3_k127_3449645_7 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000002035 125.0
BYD3_k127_3449645_8 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000002657 79.0
BYD3_k127_3449645_9 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000005039 77.0
BYD3_k127_3449659_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 597.0
BYD3_k127_3449659_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 370.0
BYD3_k127_3449659_10 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000000000002287 188.0
BYD3_k127_3449659_11 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000000000001555 188.0
BYD3_k127_3449659_12 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000002892 186.0
BYD3_k127_3449659_13 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000005526 184.0
BYD3_k127_3449659_14 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000002764 177.0
BYD3_k127_3449659_15 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000006163 164.0
BYD3_k127_3449659_16 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000001153 141.0
BYD3_k127_3449659_17 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000009906 144.0
BYD3_k127_3449659_18 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000006293 139.0
BYD3_k127_3449659_19 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 - 0.00000000000000000000000000002566 130.0
BYD3_k127_3449659_2 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 314.0
BYD3_k127_3449659_20 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000002857 106.0
BYD3_k127_3449659_21 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.0000000000000000000008258 103.0
BYD3_k127_3449659_22 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000224 87.0
BYD3_k127_3449659_23 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000001418 93.0
BYD3_k127_3449659_24 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000005039 77.0
BYD3_k127_3449659_25 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000001576 74.0
BYD3_k127_3449659_26 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000003 65.0
BYD3_k127_3449659_27 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0002722 51.0
BYD3_k127_3449659_3 Metallopeptidase family M24 K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 308.0
BYD3_k127_3449659_4 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005318 258.0
BYD3_k127_3449659_5 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002786 262.0
BYD3_k127_3449659_6 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000552 228.0
BYD3_k127_3449659_7 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000002143 221.0
BYD3_k127_3449659_8 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000004384 217.0
BYD3_k127_3449659_9 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000001635 202.0
BYD3_k127_3453477_0 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 336.0
BYD3_k127_3453477_1 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000002031 94.0
BYD3_k127_3453477_2 - - - - 0.00002906 54.0
BYD3_k127_3565341_0 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 6.207e-211 672.0
BYD3_k127_3565341_1 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 441.0
BYD3_k127_3565341_10 Cupin domain - - - 0.0005737 52.0
BYD3_k127_3565341_2 Integral membrane protein TerC family K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 338.0
BYD3_k127_3565341_3 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002659 276.0
BYD3_k127_3565341_4 PFAM von Willebrand factor type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005727 264.0
BYD3_k127_3565341_5 nitronate monooxygenase activity K00459 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000004199 248.0
BYD3_k127_3565341_6 Histidine kinase K13598 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000137 231.0
BYD3_k127_3565341_7 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.00000000000000000000000000000001589 144.0
BYD3_k127_3565341_8 diguanylate cyclase - - - 0.0000000000000000000000000003444 127.0
BYD3_k127_3565341_9 repeat-containing protein - - - 0.0000000281 67.0
BYD3_k127_3579336_0 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000007274 230.0
BYD3_k127_3579336_1 COG0747 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.0000000000000000000000000000001442 142.0
BYD3_k127_3579336_2 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000007439 120.0
BYD3_k127_3585149_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 356.0
BYD3_k127_3585149_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 338.0
BYD3_k127_3585149_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 337.0
BYD3_k127_3585149_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006902 293.0
BYD3_k127_3585149_4 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003373 257.0
BYD3_k127_3585149_5 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000001005 208.0
BYD3_k127_3585149_6 - - - - 0.000000000000000000000000000000000000000000001381 183.0
BYD3_k127_3585149_7 HlyD family secretion protein - - - 0.0000000000000000000000000001171 134.0
BYD3_k127_3585149_8 HlyD family secretion protein K02005 - - 0.00000000000000000001362 105.0
BYD3_k127_3585149_9 Peptidase M56, BlaR1 - - - 0.00001269 55.0
BYD3_k127_3597729_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006114 482.0
BYD3_k127_3597729_1 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 409.0
BYD3_k127_3597729_10 Beta/gamma crystallins - - - 0.000000000003289 72.0
BYD3_k127_3597729_11 PFAM response regulator receiver K07667 - - 0.0000005113 51.0
BYD3_k127_3597729_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 364.0
BYD3_k127_3597729_3 SMART Integrin alpha beta-propellor repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000002397 234.0
BYD3_k127_3597729_4 DoxX - - - 0.0000000000000000000000000000005655 127.0
BYD3_k127_3597729_5 Histidine kinase K07646 - 2.7.13.3 0.00000000000000000000000000005587 135.0
BYD3_k127_3597729_6 - - - - 0.000000000000000000000000001407 117.0
BYD3_k127_3597729_8 - - - - 0.0000000000000000005013 95.0
BYD3_k127_3597729_9 RDD family - - - 0.000000000000009981 78.0
BYD3_k127_3613506_0 Peptidase M16 - - - 0.0 1151.0
BYD3_k127_3613506_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005428 426.0
BYD3_k127_3613506_2 belongs to the nudix hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 336.0
BYD3_k127_3613506_3 Bacterial Ig-like domain (group 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003296 282.0
BYD3_k127_3613506_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K05886 - 1.1.1.276 0.0000000000000000000000000000000000000000000000000000000000000306 245.0
BYD3_k127_3613506_5 Bacterial Ig-like domain (group 3) - - - 0.0000000000000000000000000000000000000000000002025 194.0
BYD3_k127_3613506_6 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278,K00767 GO:0008150,GO:0040007 1.4.3.16,2.4.2.19 0.00000002562 66.0
BYD3_k127_3613506_7 Putative cell wall binding repeat 2 - - - 0.0000002489 65.0
BYD3_k127_3614303_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009335 589.0
BYD3_k127_3614303_1 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 593.0
BYD3_k127_3614303_2 BAAT / Acyl-CoA thioester hydrolase C terminal K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008252 460.0
BYD3_k127_3614303_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005714 361.0
BYD3_k127_3614303_4 COG5285 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin K00477 - 1.14.11.18 0.00000000000000000000000000000000000000000000000000000000000001339 226.0
BYD3_k127_362833_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 329.0
BYD3_k127_362833_1 methyltransferase activity K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000000000000000000000000000001269 233.0
BYD3_k127_362833_2 Serine aminopeptidase, S33 K06889 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0009605,GO:0009607,GO:0030312,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052561,GO:0052562,GO:0052564,GO:0052572,GO:0071944,GO:0075136 - 0.000000000000000000000000000000000000000000008832 166.0
BYD3_k127_3628674_0 4Fe-4S dicluster domain - - - 4.538e-319 1003.0
BYD3_k127_3628674_1 Oligopeptide transporter OPT - - - 1.649e-267 841.0
BYD3_k127_3628674_10 - K12065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006577 415.0
BYD3_k127_3628674_11 thymidylate synthase (FAD) activity K03465 - 2.1.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 401.0
BYD3_k127_3628674_12 Sodium:sulfate symporter transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008003 406.0
BYD3_k127_3628674_13 CBS domain-containing protein K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 394.0
BYD3_k127_3628674_14 PFAM Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009237 382.0
BYD3_k127_3628674_15 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005266 341.0
BYD3_k127_3628674_16 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008212 324.0
BYD3_k127_3628674_17 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 319.0
BYD3_k127_3628674_18 carbohydrate transport K02027,K10236 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 334.0
BYD3_k127_3628674_19 BlaR1 peptidase M56 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 327.0
BYD3_k127_3628674_2 Oligoendopeptidase f - - - 2.095e-226 727.0
BYD3_k127_3628674_20 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 290.0
BYD3_k127_3628674_21 Belongs to the BI1 family K06890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007157 284.0
BYD3_k127_3628674_22 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008901 274.0
BYD3_k127_3628674_23 glycerophosphodiester transmembrane transport K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003413 269.0
BYD3_k127_3628674_24 transmembrane transport K02025,K10237,K15771 GO:0008150,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044403,GO:0044419,GO:0051704 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008431 268.0
BYD3_k127_3628674_25 glutamate--cysteine ligase K01919 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000003276 273.0
BYD3_k127_3628674_26 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703,K20452 - 4.2.1.33,4.2.1.35,4.2.1.85 0.0000000000000000000000000000000000000000000000000000000000000000004858 259.0
BYD3_k127_3628674_27 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000001294 247.0
BYD3_k127_3628674_28 Peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000000000000000006596 252.0
BYD3_k127_3628674_29 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000008252 233.0
BYD3_k127_3628674_3 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 624.0
BYD3_k127_3628674_30 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000003425 226.0
BYD3_k127_3628674_31 PFAM Silent information regulator protein Sir2 K12410 - - 0.00000000000000000000000000000000000000000000000000000000000008914 221.0
BYD3_k127_3628674_32 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000001648 225.0
BYD3_k127_3628674_33 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000001507 224.0
BYD3_k127_3628674_34 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000001727 223.0
BYD3_k127_3628674_35 Predicted membrane protein (DUF2231) - - - 0.00000000000000000000000000000000000000000000000000000009917 199.0
BYD3_k127_3628674_36 ferroxidase activity K03594 GO:0003674,GO:0003824,GO:0004322,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016491,GO:0016722,GO:0016724,GO:0019725,GO:0030003,GO:0033212,GO:0033214,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0098771 1.16.3.1 0.0000000000000000000000000000000000000000000000000000009666 206.0
BYD3_k127_3628674_37 Stage II sporulation protein E K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000007156 190.0
BYD3_k127_3628674_38 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000251 188.0
BYD3_k127_3628674_39 Methyltransferase domain K00588 - 2.1.1.104 0.0000000000000000000000000000000000000000000000766 176.0
BYD3_k127_3628674_4 Peptidase dimerisation domain K01436,K01438,K01439 - 3.5.1.16,3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 517.0
BYD3_k127_3628674_40 Penicillinase repressor - - - 0.00000000000000000000000000000000000000000005376 163.0
BYD3_k127_3628674_41 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000007642 161.0
BYD3_k127_3628674_42 PFAM bifunctional deaminase-reductase domain protein K14654 - 1.1.1.302 0.000000000000000000000000000000000000000003536 170.0
BYD3_k127_3628674_43 belongs to the Fur family K03711,K09823,K09825 - - 0.000000000000000000000000000000000000005149 151.0
BYD3_k127_3628674_44 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000002244 152.0
BYD3_k127_3628674_45 PFAM molybdopterin binding domain K03742 - 3.5.1.42 0.00000000000000000000000000000000002834 151.0
BYD3_k127_3628674_46 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000002677 144.0
BYD3_k127_3628674_47 SMART Metal-dependent phosphohydrolase, HD region K07141 - 2.7.7.76 0.000000000000000000000000000000009354 142.0
BYD3_k127_3628674_48 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.00000000000000000000000000000001029 136.0
BYD3_k127_3628674_49 FMN_bind - - - 0.00000000000000000000000000000003703 132.0
BYD3_k127_3628674_5 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 503.0
BYD3_k127_3628674_50 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.0000000000000000000000000006919 118.0
BYD3_k127_3628674_52 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.000000000000001002 89.0
BYD3_k127_3628674_53 - - - - 0.000000000000003135 78.0
BYD3_k127_3628674_54 COG0607 Rhodanese-related sulfurtransferase - - - 0.000000000000004013 86.0
BYD3_k127_3628674_56 GIY-YIG type nucleases (URI domain) K02342 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0016020,GO:0030312,GO:0032991,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071944,GO:1902494,GO:1905347,GO:1905348,GO:1990391 2.7.7.7 0.000000000004856 80.0
BYD3_k127_3628674_57 PFAM Colicin V production protein K03558 - - 0.0000000002106 68.0
BYD3_k127_3628674_58 Amino acid permease K03294 - - 0.0000000003911 67.0
BYD3_k127_3628674_59 Bacterial regulatory proteins, tetR family K13770 - - 0.000000001491 70.0
BYD3_k127_3628674_6 Putative citrate transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007136 477.0
BYD3_k127_3628674_60 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source K10778 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040008,GO:0044464,GO:0045927,GO:0048518,GO:0050789,GO:0065007,GO:0071944 2.1.1.63 0.000000008918 61.0
BYD3_k127_3628674_61 Domain of unknown function (DUF4440) - - - 0.000003319 56.0
BYD3_k127_3628674_7 PFAM ATP dependent DNA ligase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000708 458.0
BYD3_k127_3628674_8 DNA polymerase K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 447.0
BYD3_k127_3628674_9 LytB protein K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 425.0
BYD3_k127_363026_0 Acetyl-coenzyme A transporter 1 K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 591.0
BYD3_k127_363026_1 Formiminotransferase-cyclodeaminase K00603,K13990 - 2.1.2.5,4.3.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 542.0
BYD3_k127_363026_10 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000003726 210.0
BYD3_k127_363026_11 PFAM filamentation induced by cAMP protein Fic - - - 0.00000000000000000000000000000000000000000000001693 184.0
BYD3_k127_363026_12 - - - - 0.00000000000000000000000000000000000000001237 166.0
BYD3_k127_363026_13 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism - - - 0.000000000000000000000000000000000006949 143.0
BYD3_k127_363026_14 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01885,K01894 - 6.1.1.17 0.000000000000000000000000000000001313 132.0
BYD3_k127_363026_2 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 452.0
BYD3_k127_363026_3 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005996 421.0
BYD3_k127_363026_4 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 366.0
BYD3_k127_363026_5 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002357 282.0
BYD3_k127_363026_6 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000003859 271.0
BYD3_k127_363026_7 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004635 271.0
BYD3_k127_363026_8 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000001944 227.0
BYD3_k127_363026_9 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000001026 226.0
BYD3_k127_3651536_0 Oxidoreductase - - - 1.589e-222 721.0
BYD3_k127_3651536_1 Glycine cleavage T-protein C-terminal barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 470.0
BYD3_k127_3651536_2 Ring hydroxylating alpha subunit (catalytic domain) K00499 - 1.14.15.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009015 361.0
BYD3_k127_3651536_3 Thi4 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000178 308.0
BYD3_k127_3651536_4 YidE YbjL K07085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004687 278.0
BYD3_k127_3651536_5 HEAT repeats - - - 0.0000000000000000000000000000000000000000001025 180.0
BYD3_k127_3651536_6 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000006426 152.0
BYD3_k127_3651536_7 - - - - 0.00000000000002552 81.0
BYD3_k127_3651536_8 - - - - 0.0000000000002815 81.0
BYD3_k127_3653227_0 Sulfatase K01130 - 3.1.6.1 0.0 1315.0
BYD3_k127_3653227_1 Radical SAM K06871 - - 1.676e-194 615.0
BYD3_k127_3653227_10 Domain of unknown function (DUF892) - - - 0.000000000000000000000000000000000000000000001054 173.0
BYD3_k127_3653227_11 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.000000000000000000000000000000000000002406 165.0
BYD3_k127_3653227_12 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.00000000000000000000000000000000008402 143.0
BYD3_k127_3653227_13 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.0000000000000000000001663 107.0
BYD3_k127_3653227_14 Thioesterase-like superfamily K07107 - - 0.000000000000000008821 98.0
BYD3_k127_3653227_15 Alpha/beta hydrolase family - - - 0.000000000001415 77.0
BYD3_k127_3653227_16 O-linked GlcNAc transferase-putative TPR-containing transmembrane protein - - - 0.0000000001373 76.0
BYD3_k127_3653227_17 Belongs to the UPF0235 family - - - 0.000000002221 70.0
BYD3_k127_3653227_2 glutamate dehydrogenase [NAD(P)+] activity K00261,K00262 - 1.4.1.3,1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004528 575.0
BYD3_k127_3653227_3 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 408.0
BYD3_k127_3653227_4 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 398.0
BYD3_k127_3653227_5 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000776 374.0
BYD3_k127_3653227_6 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 307.0
BYD3_k127_3653227_7 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006584 279.0
BYD3_k127_3653227_8 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000279 245.0
BYD3_k127_3653227_9 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.000000000000000000000000000000000000000000000000001949 208.0
BYD3_k127_3665302_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 301.0
BYD3_k127_3665302_1 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000009666 250.0
BYD3_k127_3665302_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000007059 215.0
BYD3_k127_3665302_3 Oxygen tolerance - - - 0.00000000000000000000000000000000000001736 168.0
BYD3_k127_3665302_5 Aerotolerance regulator N-terminal K07114 - - 0.00000000000000000000008382 102.0
BYD3_k127_3665302_6 Redoxin - - - 0.0000000000000000001077 104.0
BYD3_k127_3665302_7 - - - - 0.0002135 55.0
BYD3_k127_3668789_0 Dienelactone hydrolase family - - - 0.0 1172.0
BYD3_k127_3668789_1 WD40-like Beta Propeller Repeat - - - 4.117e-280 897.0
BYD3_k127_3668789_10 Protoglobin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 435.0
BYD3_k127_3668789_11 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 415.0
BYD3_k127_3668789_12 carbamoyl transferase, NodU family K00612 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 396.0
BYD3_k127_3668789_13 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 381.0
BYD3_k127_3668789_14 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 376.0
BYD3_k127_3668789_15 Nucleoside recognition - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007117 363.0
BYD3_k127_3668789_16 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 348.0
BYD3_k127_3668789_17 protein kinase activity K01972,K02342,K04096 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 2.7.7.7,6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008135 340.0
BYD3_k127_3668789_18 Amidohydrolase family K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008699 357.0
BYD3_k127_3668789_19 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 323.0
BYD3_k127_3668789_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.603e-213 690.0
BYD3_k127_3668789_20 AAA domain (Cdc48 subfamily) K03544 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 296.0
BYD3_k127_3668789_21 Membrane protein, TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 298.0
BYD3_k127_3668789_22 oligopeptide transport K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009993 293.0
BYD3_k127_3668789_23 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004388 279.0
BYD3_k127_3668789_24 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003849 276.0
BYD3_k127_3668789_25 Glucokinase K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000339 278.0
BYD3_k127_3668789_26 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003077 283.0
BYD3_k127_3668789_27 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000001337 241.0
BYD3_k127_3668789_28 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005586 239.0
BYD3_k127_3668789_29 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000004206 229.0
BYD3_k127_3668789_3 Prokaryotic cytochrome b561 - - - 1.858e-207 662.0
BYD3_k127_3668789_30 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000001189 228.0
BYD3_k127_3668789_31 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000001473 224.0
BYD3_k127_3668789_32 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000003632 200.0
BYD3_k127_3668789_33 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000009911 163.0
BYD3_k127_3668789_34 PFAM CHAD domain containing protein - - - 0.00000000000000000000000000000000000000008837 164.0
BYD3_k127_3668789_35 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000001548 168.0
BYD3_k127_3668789_36 protein conserved in bacteria K09793 - - 0.000000000000000000000000000000000000001021 152.0
BYD3_k127_3668789_37 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000001682 166.0
BYD3_k127_3668789_38 Cation efflux family - - - 0.00000000000000000000000000000000000002414 153.0
BYD3_k127_3668789_39 Reverse transcriptase-like K02226,K22316 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 0.0000000000000000000000000000000000177 139.0
BYD3_k127_3668789_4 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 612.0
BYD3_k127_3668789_40 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000005046 142.0
BYD3_k127_3668789_41 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000005312 134.0
BYD3_k127_3668789_42 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000000000000000000001969 132.0
BYD3_k127_3668789_43 Glucose-6-phosphate dehydrogenase subunit - - - 0.00000000000000000000000001334 128.0
BYD3_k127_3668789_44 PFAM DivIVA family protein K04074 - - 0.000000000000000000009358 99.0
BYD3_k127_3668789_45 Histidine kinase - - - 0.00000000000000000001012 107.0
BYD3_k127_3668789_46 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000007445 94.0
BYD3_k127_3668789_47 Universal stress protein - - - 0.00000000000000001217 91.0
BYD3_k127_3668789_48 C4-type zinc ribbon domain K07164 - - 0.0000000000000000169 93.0
BYD3_k127_3668789_49 - - - - 0.00000000000000002074 95.0
BYD3_k127_3668789_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 568.0
BYD3_k127_3668789_50 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000008659 75.0
BYD3_k127_3668789_51 Cytochrome c K00406,K08906 - - 0.00000000000279 70.0
BYD3_k127_3668789_52 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000321 76.0
BYD3_k127_3668789_53 Cytochrome c K00406,K08906 - - 0.00000000004652 74.0
BYD3_k127_3668789_54 peptidyl-tyrosine sulfation - - - 0.000000003673 69.0
BYD3_k127_3668789_55 Phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.000000004399 70.0
BYD3_k127_3668789_57 - - - - 0.0000001953 63.0
BYD3_k127_3668789_58 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000004058 61.0
BYD3_k127_3668789_59 - - - - 0.000003682 55.0
BYD3_k127_3668789_6 response regulator K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 541.0
BYD3_k127_3668789_60 GGDEF domain K03413,K07814 - - 0.00007461 51.0
BYD3_k127_3668789_61 BON domain K04065 - - 0.0001383 51.0
BYD3_k127_3668789_7 NapC/NirT cytochrome c family, N-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 453.0
BYD3_k127_3668789_8 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 430.0
BYD3_k127_3668789_9 UDP binding domain K00012,K00066 - 1.1.1.132,1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 441.0
BYD3_k127_368266_0 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 502.0
BYD3_k127_368266_1 Histidine kinase K07683 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 334.0
BYD3_k127_3712701_0 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 293.0
BYD3_k127_3712701_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000002449 125.0
BYD3_k127_3712701_2 - - - - 0.0000000000000131 87.0
BYD3_k127_3747461_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 321.0
BYD3_k127_3747461_1 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009974 317.0
BYD3_k127_3747461_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000009999 85.0
BYD3_k127_3747461_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00002531 54.0
BYD3_k127_3758780_0 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005047 327.0
BYD3_k127_383186_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 399.0
BYD3_k127_383186_1 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000009621 192.0
BYD3_k127_383186_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000001263 176.0
BYD3_k127_383186_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000001984 156.0
BYD3_k127_383186_4 Could be involved in septation K06412 - - 0.000000000000000000000000000005274 127.0
BYD3_k127_383186_5 Tetratricopeptide repeat - - - 0.00000000000000002177 85.0
BYD3_k127_3842229_0 DEAD DEAH box helicase domain protein K06877 - - 2.962e-299 946.0
BYD3_k127_3842229_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007818 496.0
BYD3_k127_3842229_10 peptidase - - - 0.000000000000000000000000001672 126.0
BYD3_k127_3842229_11 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.00000000000000000000004511 109.0
BYD3_k127_3842229_12 Putative regulatory protein - - - 0.0000000000000000000005809 101.0
BYD3_k127_3842229_13 Belongs to the Nudix hydrolase family K03574 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008413,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0030145,GO:0033554,GO:0034641,GO:0035539,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044715,GO:0044716,GO:0046483,GO:0046872,GO:0046914,GO:0047429,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55 0.0000000000000000001675 94.0
BYD3_k127_3842229_14 regulation of translation K03530 - - 0.0000000000000000002436 90.0
BYD3_k127_3842229_15 Domain of unknown function (DUF4349) - - - 0.0000000000000001997 90.0
BYD3_k127_3842229_16 amidohydrolase - - - 0.0000000000000002116 94.0
BYD3_k127_3842229_17 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00002531 53.0
BYD3_k127_3842229_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 467.0
BYD3_k127_3842229_3 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 417.0
BYD3_k127_3842229_4 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009532 439.0
BYD3_k127_3842229_5 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005721 368.0
BYD3_k127_3842229_6 N-Acetylmuramoyl-L-alanine amidase K01448,K02172 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000003617 274.0
BYD3_k127_3842229_7 - - - - 0.000000000000000000000000000000000000000000000000001714 202.0
BYD3_k127_3842229_8 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000001146 164.0
BYD3_k127_3842229_9 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000002696 158.0
BYD3_k127_3844877_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 549.0
BYD3_k127_3845110_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1375.0
BYD3_k127_3845110_1 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 571.0
BYD3_k127_3845110_10 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004022 259.0
BYD3_k127_3845110_11 ATPases associated with a variety of cellular activities K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002264 260.0
BYD3_k127_3845110_12 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000001297 233.0
BYD3_k127_3845110_13 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000001347 218.0
BYD3_k127_3845110_14 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000001633 231.0
BYD3_k127_3845110_15 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000000000343 201.0
BYD3_k127_3845110_16 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000143 201.0
BYD3_k127_3845110_17 OsmC-like protein K04063 - - 0.000000000000000000000000000000000000000000000000006007 184.0
BYD3_k127_3845110_18 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000003401 171.0
BYD3_k127_3845110_19 YjbR - - - 0.00000000000000000000000000000000000003403 149.0
BYD3_k127_3845110_2 oligopeptide transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 521.0
BYD3_k127_3845110_20 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000000001577 160.0
BYD3_k127_3845110_21 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000001841 141.0
BYD3_k127_3845110_22 Cysteine dioxygenase type I K00456 - 1.13.11.20 0.0000000000000000000000000000000001741 138.0
BYD3_k127_3845110_23 - - - - 0.00000000000000000000000002279 122.0
BYD3_k127_3845110_24 Helix-turn-helix domain K07729 - - 0.000000000000000000000008611 105.0
BYD3_k127_3845110_25 Protein of unknown function (DUF2721) - - - 0.0000000000000000000005738 113.0
BYD3_k127_3845110_26 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697,K16055 GO:0003674,GO:0003824,GO:0003825,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016311,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0030312,GO:0033554,GO:0034637,GO:0035251,GO:0040007,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046527,GO:0046872,GO:0046914,GO:0047260,GO:0050896,GO:0051716,GO:0070413,GO:0071704,GO:0071944,GO:1901576 2.4.1.15,2.4.1.347,3.1.3.12 0.00000000000000000001155 102.0
BYD3_k127_3845110_27 - - - - 0.000000000000006484 80.0
BYD3_k127_3845110_28 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.000000000000007032 85.0
BYD3_k127_3845110_29 Abortive infection protein K07052 - - 0.0000000000001899 79.0
BYD3_k127_3845110_3 Cys/Met metabolism PLP-dependent enzyme K01739 - 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008094 408.0
BYD3_k127_3845110_30 Metallo-peptidase family M12B Reprolysin-like - - - 0.0000000000003951 82.0
BYD3_k127_3845110_31 ankyrin repeat K15503 - - 0.000154 53.0
BYD3_k127_3845110_33 Belongs to the peptidase M50B family - - - 0.0005003 45.0
BYD3_k127_3845110_34 Histidine kinase - - - 0.0009112 51.0
BYD3_k127_3845110_4 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001985 417.0
BYD3_k127_3845110_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 365.0
BYD3_k127_3845110_6 Belongs to the cysteine synthase cystathionine beta- synthase family K01697,K01738,K18926 - 2.5.1.47,4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 336.0
BYD3_k127_3845110_7 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007928 322.0
BYD3_k127_3845110_8 major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 308.0
BYD3_k127_3845110_9 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 289.0
BYD3_k127_3880617_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0 1391.0
BYD3_k127_3880617_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 435.0
BYD3_k127_3880617_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000781 135.0
BYD3_k127_3880617_3 Coagulation factor 5/8 C-terminal domain, discoidin domain - - - 0.00000000000000000000000002875 117.0
BYD3_k127_3880617_4 transposition, DNA-mediated K02342 - 2.7.7.7 0.0000000000000000475 93.0
BYD3_k127_3880617_5 thiolester hydrolase activity K06889 - - 0.0001792 48.0
BYD3_k127_3880617_6 Alpha-2-Macroglobulin - - - 0.000877 44.0
BYD3_k127_3889765_0 acyl-CoA dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 367.0
BYD3_k127_3889765_1 Lanthionine synthetase C-like protein K20484 - - 0.0000000000000000000000000000000000000000000000000000000000001048 228.0
BYD3_k127_3906410_0 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 2.453e-252 797.0
BYD3_k127_3906410_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 458.0
BYD3_k127_3906410_10 Protein of unknown function (DUF4239) - - - 0.00005419 51.0
BYD3_k127_3906410_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009615 455.0
BYD3_k127_3906410_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 334.0
BYD3_k127_3906410_4 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009102 335.0
BYD3_k127_3906410_5 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 324.0
BYD3_k127_3906410_6 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002134 278.0
BYD3_k127_3906410_7 PFAM OmpW family protein K07275 - - 0.0000000000000000000000000000000000000000000000538 177.0
BYD3_k127_3906410_8 KDPG and KHG aldolase - - - 0.0000000000000000000000000000000000000002088 160.0
BYD3_k127_3906410_9 Sigma-70 region 2 K03088 - - 0.0000000002688 71.0
BYD3_k127_3908148_0 OB-fold nucleic acid binding domain K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 539.0
BYD3_k127_3908148_1 Beta-eliminating lyase K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 332.0
BYD3_k127_3908148_2 Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine K18911 - 2.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003058 297.0
BYD3_k127_3908148_3 Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs K05544 - 1.3.1.89 0.0000000000000000000000000000000000000000000000000000000000000001157 239.0
BYD3_k127_3908148_4 PFAM peptidase M28 - - - 0.00000000000000000000000000000000000000000000000006411 197.0
BYD3_k127_3908148_5 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000000005663 156.0
BYD3_k127_3908148_6 Phosphotransferase enzyme family K12132 - 2.7.11.1 0.0000000000000000000000000000004549 141.0
BYD3_k127_3908148_7 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000657 111.0
BYD3_k127_3908148_8 Exonuclease VII small subunit K03602 - 3.1.11.6 0.0000000000000000000376 96.0
BYD3_k127_3917123_0 Belongs to the peptidase M16 family K07263 - - 0.0 1030.0
BYD3_k127_3917123_1 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.0 1026.0
BYD3_k127_3917123_2 Zinc carboxypeptidase - - - 2.548e-197 641.0
BYD3_k127_3917123_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. K12266 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 488.0
BYD3_k127_3917123_4 asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008625 423.0
BYD3_k127_3917123_5 AlkA N-terminal domain K13529 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000001385 230.0
BYD3_k127_3917123_6 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.0000000000000000000000000000000000000000000000000000001169 201.0
BYD3_k127_3917123_7 - - - - 0.0000000000000000000000000000000000005106 149.0
BYD3_k127_3917123_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000001113 129.0
BYD3_k127_3917123_9 ABC transporter K01990 - - 0.0000000000000000000000004945 115.0
BYD3_k127_3961445_0 PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic K01886 - 6.1.1.18 7.276e-241 760.0
BYD3_k127_3961445_1 DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 510.0
BYD3_k127_3961445_10 DNA polymerase Ligase (LigD) - - - 0.000000000000000000000000000000000000000000004997 177.0
BYD3_k127_3961445_11 Nucleotidyltransferase domain - - - 0.0000000000000000000000000000000000000009779 170.0
BYD3_k127_3961445_12 YCII-related domain - - - 0.00000000000000000000000000000000000007224 156.0
BYD3_k127_3961445_13 Predicted membrane protein (DUF2339) - - - 0.000000000000000000000000000003299 139.0
BYD3_k127_3961445_14 Sporulation and spore germination - - - 0.0000000000000000000000001061 113.0
BYD3_k127_3961445_15 - - - - 0.00000000000000000005439 93.0
BYD3_k127_3961445_16 of nitrite reductase and ring-hydroxylating dioxygenase K00363,K05710 - 1.7.1.15 0.000000000000000000106 104.0
BYD3_k127_3961445_17 - - - - 0.00000000000000396 81.0
BYD3_k127_3961445_2 sigma factor activity K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 447.0
BYD3_k127_3961445_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 299.0
BYD3_k127_3961445_4 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 294.0
BYD3_k127_3961445_5 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003121 271.0
BYD3_k127_3961445_6 Serine threonine protein kinase K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000009942 258.0
BYD3_k127_3961445_7 intracellular protease K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000004831 231.0
BYD3_k127_3961445_8 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000368 203.0
BYD3_k127_3961445_9 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000702 195.0
BYD3_k127_3968806_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.0 1257.0
BYD3_k127_3968806_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 1.736e-210 683.0
BYD3_k127_3968806_10 Peptidase family M50 K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001437 281.0
BYD3_k127_3968806_11 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000001611 240.0
BYD3_k127_3968806_12 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000004651 217.0
BYD3_k127_3968806_13 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000007509 203.0
BYD3_k127_3968806_14 peptidase U61 LD-carboxypeptidase A K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000003726 182.0
BYD3_k127_3968806_15 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000002637 188.0
BYD3_k127_3968806_16 PFAM EAL domain - - - 0.000000000000000000000000000000000000000000003941 186.0
BYD3_k127_3968806_17 Xanthine and CO dehydrogenases maturation factor XdhC CoxF family K07402 - - 0.00000000000000000000000000000000000000000001472 171.0
BYD3_k127_3968806_18 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000000000000000002841 169.0
BYD3_k127_3968806_19 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000009414 164.0
BYD3_k127_3968806_2 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008709 419.0
BYD3_k127_3968806_20 Maf-like protein K06287 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.0000000000000000000000000000000000002042 160.0
BYD3_k127_3968806_21 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.0000000000000000000000000000000001221 151.0
BYD3_k127_3968806_22 Telomere recombination K07566 - 2.7.7.87 0.0000000000000000000000000000000001984 139.0
BYD3_k127_3968806_23 PFAM Cytochrome c assembly protein - - - 0.0000000000000000000000000000000007507 143.0
BYD3_k127_3968806_24 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000000000000002219 138.0
BYD3_k127_3968806_26 Transmembrane protein 260 - - - 0.00000000000000000000000002268 125.0
BYD3_k127_3968806_27 Polymer-forming cytoskeletal - - - 0.0000000000000000000000005532 120.0
BYD3_k127_3968806_28 Peptidase M56 - - - 0.00000000000000000000001619 116.0
BYD3_k127_3968806_29 Two component transcriptional regulator, winged helix family K07657 - - 0.00000000000000000000009953 102.0
BYD3_k127_3968806_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 421.0
BYD3_k127_3968806_30 5'-nucleotidase, C-terminal domain K01081 - 3.1.3.5 0.0000000000000000009794 96.0
BYD3_k127_3968806_31 Uroporphyrinogen-III synthase HemD K13542 - 2.1.1.107,4.2.1.75 0.0000000000000002525 88.0
BYD3_k127_3968806_32 Psort location CytoplasmicMembrane, score K02237 - - 0.00000000000002756 87.0
BYD3_k127_3968806_33 response regulator K02282 - - 0.00000000000006543 78.0
BYD3_k127_3968806_34 - - - - 0.0000000000009878 78.0
BYD3_k127_3968806_35 response regulator, receiver - - - 0.000000000005084 78.0
BYD3_k127_3968806_36 Phycocyanin alpha phycocyanobilin lyase-like protein - - - 0.000000000009615 76.0
BYD3_k127_3968806_37 - - - - 0.00001123 50.0
BYD3_k127_3968806_38 Tetratricopeptide repeat - - - 0.00003421 49.0
BYD3_k127_3968806_39 Methyltransferase - - - 0.00009335 54.0
BYD3_k127_3968806_4 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081 386.0
BYD3_k127_3968806_5 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 395.0
BYD3_k127_3968806_6 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003299 374.0
BYD3_k127_3968806_7 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000628 368.0
BYD3_k127_3968806_8 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 324.0
BYD3_k127_3968806_9 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006709 285.0
BYD3_k127_4017398_0 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 445.0
BYD3_k127_4017398_1 Transcription factor zinc-finger K09981 - - 0.00000000000000000000000000001678 126.0
BYD3_k127_4017398_2 CHRD domain - - - 0.0000000002227 61.0
BYD3_k127_4028964_0 ferredoxin oxidoreductase K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 9.728e-243 772.0
BYD3_k127_4028964_1 Acyclic terpene utilisation family protein AtuA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 584.0
BYD3_k127_4028964_10 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000000000000186 231.0
BYD3_k127_4028964_11 Belongs to the enoyl-CoA hydratase isomerase family K05607 GO:0003674,GO:0003824,GO:0004300,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000001278 233.0
BYD3_k127_4028964_12 COGs COG2912 conserved - - - 0.000000000000000000000000000000000000000000000000000000000006618 218.0
BYD3_k127_4028964_13 - - - - 0.000000000000000000000000000000000000000005537 164.0
BYD3_k127_4028964_14 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000000000000000000004597 169.0
BYD3_k127_4028964_15 COG3119 Arylsulfatase A and related enzymes - - - 0.0000000000000000000000000000000000000004457 162.0
BYD3_k127_4028964_16 hydrolase of the alpha beta superfamily K07018 - - 0.0000000000000000000000000000000000000004819 160.0
BYD3_k127_4028964_17 PFAM MOSC domain - - - 0.00000000000000000000000000000000003494 143.0
BYD3_k127_4028964_18 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000003485 129.0
BYD3_k127_4028964_19 - - - - 0.00000000000000000000000000000007053 134.0
BYD3_k127_4028964_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016625,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0030312,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046872,GO:0047553,GO:0055114,GO:0071704,GO:0071944,GO:0072350 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 466.0
BYD3_k127_4028964_20 Belongs to the ComB family K05979 - 3.1.3.71 0.0000000000000000000000000009573 130.0
BYD3_k127_4028964_21 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0031224,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.000000000000000000000000005531 123.0
BYD3_k127_4028964_22 - - - - 0.0000000000000000000000007016 105.0
BYD3_k127_4028964_23 - - - - 0.0000000000000000000000007905 120.0
BYD3_k127_4028964_24 amino acid K03294 - - 0.00000000000000000000001061 103.0
BYD3_k127_4028964_25 PFAM Phosphoglycerate mutase - - - 0.000000000000000001499 100.0
BYD3_k127_4028964_26 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000001097 97.0
BYD3_k127_4028964_27 - - - - 0.00000000001075 75.0
BYD3_k127_4028964_29 Calcium/calmodulin dependent protein kinase II association domain - - - 0.000004185 57.0
BYD3_k127_4028964_3 Ribonuclease E/G family K08300,K08301 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 471.0
BYD3_k127_4028964_4 proline dipeptidase activity K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 419.0
BYD3_k127_4028964_5 Family of unknown function (DUF1028) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 346.0
BYD3_k127_4028964_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 353.0
BYD3_k127_4028964_7 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000427 287.0
BYD3_k127_4028964_8 Bacterial extracellular solute-binding proteins, family 5 Middle K13893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003447 273.0
BYD3_k127_4028964_9 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000000000000001801 228.0
BYD3_k127_4064170_0 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 634.0
BYD3_k127_4064170_1 Malate synthase K01638 - 2.3.3.9 0.00000000000000000000000000000000000000000000000000000000000000004435 227.0
BYD3_k127_4064170_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000009201 236.0
BYD3_k127_4064170_3 - - - - 0.000000000000000000000000000000000000000000000000004468 188.0
BYD3_k127_4064170_4 Tetratricopeptide repeat - - - 0.000001661 55.0
BYD3_k127_4064170_5 Outer membrane protein W K07275 - - 0.0002217 52.0
BYD3_k127_4124070_0 amine dehydrogenase activity - - - 1.365e-287 905.0
BYD3_k127_416145_0 Transketolase, central region K00615 - 2.2.1.1 2.65e-271 876.0
BYD3_k127_416145_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.279e-260 816.0
BYD3_k127_416145_10 - - - - 0.00000000000000000000000000000000001456 157.0
BYD3_k127_416145_11 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000002143 140.0
BYD3_k127_416145_12 light absorption - - - 0.00000000000000000000000000000000004237 140.0
BYD3_k127_416145_13 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 GO:0003674,GO:0003824,GO:0004617,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008219,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0012501,GO:0016053,GO:0016491,GO:0016597,GO:0016614,GO:0016616,GO:0019752,GO:0031406,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0047545,GO:0055114,GO:0070905,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.399,1.1.1.95 0.00000000000000007292 83.0
BYD3_k127_416145_15 - - - - 0.000000000002097 76.0
BYD3_k127_416145_16 Tetratricopeptide repeat - - - 0.00000001114 67.0
BYD3_k127_416145_17 - - - - 0.0000001913 62.0
BYD3_k127_416145_18 Glycosyl transferase - - - 0.00008775 55.0
BYD3_k127_416145_19 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0006157 52.0
BYD3_k127_416145_2 MgtE intracellular N domain K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 576.0
BYD3_k127_416145_3 tRNA (guanine-N7-)-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 496.0
BYD3_k127_416145_4 PFAM aminotransferase, class I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 392.0
BYD3_k127_416145_5 RNA polymerase recycling family C-terminal K03580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005897 327.0
BYD3_k127_416145_6 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002113 300.0
BYD3_k127_416145_7 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000006704 170.0
BYD3_k127_416145_8 - - - - 0.000000000000000000000000000000000000001509 150.0
BYD3_k127_416145_9 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000001065 158.0
BYD3_k127_422061_0 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000156 150.0
BYD3_k127_422061_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 0.00000000000000000000000000000001711 128.0
BYD3_k127_422061_2 Cupin domain - - - 0.00000000000000000000000006619 112.0
BYD3_k127_4224966_0 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007384 320.0
BYD3_k127_4224966_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000001648 228.0
BYD3_k127_4226944_0 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 0.0 1292.0
BYD3_k127_4226944_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005724 559.0
BYD3_k127_4226944_10 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000002349 175.0
BYD3_k127_4226944_11 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000006188 168.0
BYD3_k127_4226944_12 EamA-like transporter family - - - 0.0000000000000000000000000000000000002576 160.0
BYD3_k127_4226944_13 Acyltransferase family - - - 0.0000000000000000000000000000000000005512 158.0
BYD3_k127_4226944_14 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000003773 149.0
BYD3_k127_4226944_15 HYR domain - - - 0.000000000000000000006172 111.0
BYD3_k127_4226944_16 sensor histidine kinase response - - - 0.000000000000000000305 98.0
BYD3_k127_4226944_17 oligosaccharyl transferase activity - - - 0.0000000000000000003323 103.0
BYD3_k127_4226944_18 Glycoprotease family K14742 - - 0.000000000000000002045 93.0
BYD3_k127_4226944_19 Fibronectin type 3 domain - - - 0.00000000000000433 90.0
BYD3_k127_4226944_2 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 426.0
BYD3_k127_4226944_20 Metallo-beta-lactamase superfamily - - - 0.000000000054 73.0
BYD3_k127_4226944_21 lipolytic protein G-D-S-L family - - - 0.0000000000685 77.0
BYD3_k127_4226944_22 Tetratricopeptide repeat - - - 0.00000002746 56.0
BYD3_k127_4226944_23 CHAT domain - - - 0.00001486 51.0
BYD3_k127_4226944_24 nuclear chromosome segregation - - - 0.00003681 56.0
BYD3_k127_4226944_3 histidine kinase A domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 313.0
BYD3_k127_4226944_4 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 320.0
BYD3_k127_4226944_5 Belongs to the peptidase S1B family K01337 - 3.4.21.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004704 296.0
BYD3_k127_4226944_6 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000005971 262.0
BYD3_k127_4226944_7 response regulator K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000002399 261.0
BYD3_k127_4226944_8 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000007406 213.0
BYD3_k127_4226944_9 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000001219 238.0
BYD3_k127_4240357_0 Carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 621.0
BYD3_k127_4240357_1 amino acid - - - 0.00000000000000000000000000000000000000000000000000000000003369 224.0
BYD3_k127_4240357_2 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000002328 225.0
BYD3_k127_4240357_3 metallopeptidase activity - - - 0.0000000000000000000000003485 123.0
BYD3_k127_4240357_4 TspO/MBR family K05770 - - 0.0000000000000000000004913 100.0
BYD3_k127_4241473_0 Phosphoenolpyruvate phosphomutase K01637 - 4.1.3.1 3.544e-200 633.0
BYD3_k127_4241473_1 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 580.0
BYD3_k127_4241473_2 Pfam:DUF955 K07110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 563.0
BYD3_k127_4241473_3 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003777 416.0
BYD3_k127_4241473_4 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000007756 234.0
BYD3_k127_4241473_5 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000001311 220.0
BYD3_k127_4241473_6 Isoleucine patch superfamily - - - 0.00000000000000000000000000000000000000000000000149 186.0
BYD3_k127_4241473_7 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000001909 174.0
BYD3_k127_4241473_8 Exonuclease - - - 0.00000000000000004459 90.0
BYD3_k127_4241473_9 Domain of unknown function (DUF4383) - - - 0.00000000007476 74.0
BYD3_k127_4255219_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1095.0
BYD3_k127_4255219_1 GTP-binding protein TypA K06207 - - 3.524e-263 822.0
BYD3_k127_4255219_10 PFAM NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 475.0
BYD3_k127_4255219_11 Endoribonuclease that initiates mRNA decay K18682 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 475.0
BYD3_k127_4255219_12 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 428.0
BYD3_k127_4255219_13 Dehydrogenase K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 412.0
BYD3_k127_4255219_14 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 399.0
BYD3_k127_4255219_15 PFAM NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000686 386.0
BYD3_k127_4255219_16 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 391.0
BYD3_k127_4255219_17 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009478 398.0
BYD3_k127_4255219_18 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 372.0
BYD3_k127_4255219_19 PFAM NAD-dependent epimerase dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 365.0
BYD3_k127_4255219_2 Asparagine synthase - - - 2.052e-234 743.0
BYD3_k127_4255219_20 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007687 373.0
BYD3_k127_4255219_21 Belongs to the DegT DnrJ EryC1 family K13010,K19715 - 2.6.1.102,2.6.1.109 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 375.0
BYD3_k127_4255219_22 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008262 347.0
BYD3_k127_4255219_23 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 330.0
BYD3_k127_4255219_24 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005106 338.0
BYD3_k127_4255219_25 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003761 302.0
BYD3_k127_4255219_26 Protein of unknown function (DUF2400) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002559 278.0
BYD3_k127_4255219_27 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004126 256.0
BYD3_k127_4255219_28 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008744 257.0
BYD3_k127_4255219_29 Heparinase II/III N-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009653 260.0
BYD3_k127_4255219_3 elongation factor Tu domain 2 protein K02355 - - 1.597e-218 699.0
BYD3_k127_4255219_30 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000147 253.0
BYD3_k127_4255219_31 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000002055 247.0
BYD3_k127_4255219_32 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000002273 245.0
BYD3_k127_4255219_33 Glycosyltransferase, group 4 family K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000002968 237.0
BYD3_k127_4255219_34 Mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000001684 244.0
BYD3_k127_4255219_35 Bacterial transferase hexapeptide (six repeats) K00640 GO:0000096,GO:0000097,GO:0000098,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009070,GO:0009087,GO:0009987,GO:0016053,GO:0016054,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000622 220.0
BYD3_k127_4255219_36 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.0000000000000000000000000000000000000000000000000000000000004105 217.0
BYD3_k127_4255219_37 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0000726,GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0008833,GO:0009987,GO:0016787,GO:0016788,GO:0016888,GO:0016893,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000002109 230.0
BYD3_k127_4255219_38 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000108 206.0
BYD3_k127_4255219_39 PFAM S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000003892 202.0
BYD3_k127_4255219_4 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.601e-205 655.0
BYD3_k127_4255219_40 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000000000000000000000824 202.0
BYD3_k127_4255219_41 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000000000004903 206.0
BYD3_k127_4255219_42 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000004367 187.0
BYD3_k127_4255219_43 DNA polymerase III K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000001537 185.0
BYD3_k127_4255219_44 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000002376 183.0
BYD3_k127_4255219_45 Enoyl-CoA hydratase/isomerase K01715,K13767 GO:0003674,GO:0003824,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 4.2.1.17 0.000000000000000000000000000000000000000000003469 185.0
BYD3_k127_4255219_46 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000005788 177.0
BYD3_k127_4255219_47 tRNA nucleotidyltransferase poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000002801 180.0
BYD3_k127_4255219_48 NYN domain - - - 0.0000000000000000000000000000000000000001998 168.0
BYD3_k127_4255219_5 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 543.0
BYD3_k127_4255219_50 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.0000000000000000000000000000000000001234 149.0
BYD3_k127_4255219_51 Heat shock protein DnaJ domain protein - - - 0.0000000000000000000000000000000000002434 157.0
BYD3_k127_4255219_52 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.00000000000000000000000000000000001996 151.0
BYD3_k127_4255219_53 Calcineurin-like phosphoesterase K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.0000000000000000000000000000000002385 153.0
BYD3_k127_4255219_54 Glycosyl transferases group 1 - - - 0.00000000000000000000000000001526 132.0
BYD3_k127_4255219_55 O-Antigen ligase K02847 - - 0.00000000000000000000000000006856 132.0
BYD3_k127_4255219_56 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000699 134.0
BYD3_k127_4255219_57 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000007197 123.0
BYD3_k127_4255219_58 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.00000000000000000000000000009199 130.0
BYD3_k127_4255219_59 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000008058 117.0
BYD3_k127_4255219_6 UDP binding domain K13015 - 1.1.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 532.0
BYD3_k127_4255219_60 Tetratricopeptide repeat - - - 0.00000000000000000001484 101.0
BYD3_k127_4255219_61 lipolytic protein G-D-S-L family - - - 0.00000000000000000002706 103.0
BYD3_k127_4255219_62 Glycosyl transferases group 1 - - - 0.00000000000000000003193 105.0
BYD3_k127_4255219_63 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.0000000000000000001076 100.0
BYD3_k127_4255219_64 - - - - 0.0000000000000000001333 98.0
BYD3_k127_4255219_65 Protein involved in polysaccharide K01991 - - 0.0000000000000001769 91.0
BYD3_k127_4255219_66 peptidase M48, Ste24p - - - 0.00000000006136 75.0
BYD3_k127_4255219_67 - - - - 0.00000000007234 74.0
BYD3_k127_4255219_68 Formyl transferase - - - 0.0000000006041 71.0
BYD3_k127_4255219_69 ThiS family - - - 0.0000000008194 63.0
BYD3_k127_4255219_7 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 561.0
BYD3_k127_4255219_70 - - - - 0.00000005386 58.0
BYD3_k127_4255219_71 polysaccharide biosynthetic process - - - 0.0000001649 64.0
BYD3_k127_4255219_72 Methyltransferase domain - - - 0.0000001667 63.0
BYD3_k127_4255219_73 - - - - 0.0000003163 64.0
BYD3_k127_4255219_74 BON domain - - - 0.0000005178 63.0
BYD3_k127_4255219_75 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.00001145 57.0
BYD3_k127_4255219_76 - - - - 0.0001459 55.0
BYD3_k127_4255219_8 Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01893 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009974 540.0
BYD3_k127_4255219_9 PFAM acyl-CoA dehydrogenase domain protein K00252 - 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 488.0
BYD3_k127_4255993_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 594.0
BYD3_k127_4255993_1 Oligopeptidase F K08602 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003905 556.0
BYD3_k127_4255993_10 aspartate racemase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002911 240.0
BYD3_k127_4255993_11 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000002533 219.0
BYD3_k127_4255993_12 Calcineurin-like phosphoesterase K07099 - - 0.0000000000000000000000000000000000000000000000000000000002424 229.0
BYD3_k127_4255993_13 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000004477 203.0
BYD3_k127_4255993_14 Peptidase family M20/M25/M40 K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000004756 216.0
BYD3_k127_4255993_15 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000000000000000000000000003928 179.0
BYD3_k127_4255993_16 Multi-sensor signal transduction histidine kinase K07710,K13598 - 2.7.13.3 0.000000000000000000000000000000000000000002839 180.0
BYD3_k127_4255993_17 Peptidase family M23 - - - 0.00000000000000000000000000000000000000003297 164.0
BYD3_k127_4255993_18 Lactoylglutathione lyase and related lyases - - - 0.00000000000000000000000000000000000006111 145.0
BYD3_k127_4255993_19 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000002697 140.0
BYD3_k127_4255993_2 phosphorelay signal transduction system K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 450.0
BYD3_k127_4255993_20 Protein of unknown function (DUF3303) - - - 0.0000000000000000000000000000003022 124.0
BYD3_k127_4255993_21 Aspartyl protease - - - 0.000000000000000006495 100.0
BYD3_k127_4255993_22 peptidyl-tyrosine sulfation - - - 0.00000000000000003033 98.0
BYD3_k127_4255993_23 COG0457 FOG TPR repeat - - - 0.0003009 53.0
BYD3_k127_4255993_3 Cystathionine beta-synthase K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 417.0
BYD3_k127_4255993_4 ATPase of the ABC class - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346 319.0
BYD3_k127_4255993_5 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 316.0
BYD3_k127_4255993_6 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000204 279.0
BYD3_k127_4255993_7 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000003727 265.0
BYD3_k127_4255993_8 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000134 265.0
BYD3_k127_4255993_9 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000005405 266.0
BYD3_k127_4260772_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 541.0
BYD3_k127_4260772_1 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005853 502.0
BYD3_k127_4260772_10 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000001674 151.0
BYD3_k127_4260772_11 Transposase - - - 0.0000000000000000000000000000000000005867 149.0
BYD3_k127_4260772_12 conserved protein, contains double-stranded beta-helix domain - - - 0.000000000000000000000000000000000001285 145.0
BYD3_k127_4260772_13 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000001394 97.0
BYD3_k127_4260772_2 PFAM Sodium sulphate symporter K14445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 453.0
BYD3_k127_4260772_3 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 445.0
BYD3_k127_4260772_4 Dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 348.0
BYD3_k127_4260772_5 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 326.0
BYD3_k127_4260772_6 Conserved TM helix K03442 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002837 285.0
BYD3_k127_4260772_7 amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002953 284.0
BYD3_k127_4260772_8 extracellular structure organization - GO:0003674,GO:0005198,GO:0005575,GO:0005576,GO:0008150,GO:0009987,GO:0010033,GO:0014070,GO:0016043,GO:0030198,GO:0030587,GO:0031012,GO:0031154,GO:0032502,GO:0042221,GO:0043062,GO:0044421,GO:0048856,GO:0050896,GO:0051703,GO:0051704,GO:0071840,GO:0080184,GO:0090702,GO:0099120,GO:1901700,GO:1902168,GO:1905395 - 0.0000000000000000000000000000000000000000000000000000000000000000000002298 263.0
BYD3_k127_4260772_9 Cupin domain - - - 0.00000000000000000000000000000000000000000005493 166.0
BYD3_k127_4269851_0 - - - - 5.66e-266 837.0
BYD3_k127_4269851_1 Alpha-amylase domain K01176 - 3.2.1.1 3.96e-213 672.0
BYD3_k127_4269851_10 Alanine dehydrogenase/PNT, C-terminal domain K07538 - 1.1.1.368 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009339 373.0
BYD3_k127_4269851_11 C-terminal binding-module, SLH-like, of glucodextranase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 363.0
BYD3_k127_4269851_12 Benzoyl-CoA reductase subunit K04115 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 317.0
BYD3_k127_4269851_13 C-terminal binding-module, SLH-like, of glucodextranase - - - 0.00000000000000000000000000000000000000000000000000000000000009381 225.0
BYD3_k127_4269851_14 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000296 198.0
BYD3_k127_4269851_15 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.0000000000000000000000000000000000000000000008371 170.0
BYD3_k127_4269851_16 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000682 144.0
BYD3_k127_4269851_17 FR47-like protein K18816 - 2.3.1.82 0.000000000000000000000000000000004924 137.0
BYD3_k127_4269851_18 Glyoxalase - - - 0.0000000000000000000000000000003521 124.0
BYD3_k127_4269851_19 - - - - 0.00000000000322 69.0
BYD3_k127_4269851_2 2-hydroxyglutaryl-CoA dehydratase, D-component K04113 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 629.0
BYD3_k127_4269851_20 Transcriptional regulator - - - 0.00000002288 64.0
BYD3_k127_4269851_21 Uncharacterized protein conserved in bacteria (DUF2087) - - - 0.0002372 48.0
BYD3_k127_4269851_3 Bacterial extracellular solute-binding protein K15770 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 572.0
BYD3_k127_4269851_4 Belongs to the ABC transporter superfamily K05816,K10111,K10112 - 3.6.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004563 517.0
BYD3_k127_4269851_5 Sugar ABC transporter permease K10109,K15770,K15771 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 524.0
BYD3_k127_4269851_6 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007381 499.0
BYD3_k127_4269851_7 Binding-protein-dependent transport system inner membrane component K10110,K15772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 473.0
BYD3_k127_4269851_8 Benzoyl-CoA reductase subunit K04114 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007052 464.0
BYD3_k127_4269851_9 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005918 420.0
BYD3_k127_4302573_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003724 340.0
BYD3_k127_4302573_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000002112 187.0
BYD3_k127_4302573_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000003903 171.0
BYD3_k127_4302573_3 - - - - 0.00000000000000003563 88.0
BYD3_k127_4302573_4 Outer membrane protein beta-barrel domain - - - 0.000000003108 68.0
BYD3_k127_4309788_0 Isocitrate lyase K01637 GO:0003674,GO:0003824,GO:0004451,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0006102,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046421,GO:0046487,GO:0071704,GO:0072350 4.1.3.1 0.0 1066.0
BYD3_k127_4309788_1 Beta-lactamase - - - 2.632e-214 685.0
BYD3_k127_4309788_2 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 363.0
BYD3_k127_4309788_3 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008559 344.0
BYD3_k127_4309788_4 Malate synthase K01638 - 2.3.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 307.0
BYD3_k127_4309788_5 Fibronectin type 3 domain - - - 0.00000145 62.0
BYD3_k127_4319158_0 Dodecin K09165 - - 0.0000000000000008983 78.0
BYD3_k127_4361118_0 PhoPQ-activated pathogenicity-related protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 442.0
BYD3_k127_4361118_1 DNA-templated transcription, initiation - - - 0.00000000000000000000000000000000000000000000000000000000000000000001528 245.0
BYD3_k127_4361118_2 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000000208 185.0
BYD3_k127_4361118_3 - - - - 0.00000000001609 76.0
BYD3_k127_4365479_0 Peptidase family M1 domain K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007314 407.0
BYD3_k127_4365479_1 (ABC) transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 306.0
BYD3_k127_4384955_0 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 375.0
BYD3_k127_4384955_1 PFAM Peptidase M20 K01436,K12940 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 360.0
BYD3_k127_4384955_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007337 346.0
BYD3_k127_4384955_3 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000007847 220.0
BYD3_k127_4384955_4 Belongs to the GcvT family K00605,K06980 - 2.1.2.10 0.0000000000000000000000000000000000002424 156.0
BYD3_k127_4384955_5 including yeast histone deacetylase and acetoin utilization protein - - - 0.00000000000000000000000000001965 121.0
BYD3_k127_4384955_6 EamA-like transporter family - - - 0.0000000000000000000000000324 125.0
BYD3_k127_4384955_7 - - - - 0.00004061 51.0
BYD3_k127_4384955_8 COG0457 FOG TPR repeat - - - 0.00008472 55.0
BYD3_k127_441998_0 Ribosomal protein S1 K02945,K03527 - 1.17.7.4 4.208e-204 651.0
BYD3_k127_441998_1 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 410.0
BYD3_k127_441998_10 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000003137 152.0
BYD3_k127_441998_11 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000018 146.0
BYD3_k127_441998_12 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.000000000000000000000000000000001969 132.0
BYD3_k127_441998_13 Putative 2OG-Fe(II) oxygenase - - - 0.000000000000000001643 100.0
BYD3_k127_441998_14 ribonuclease BN K07058 - - 0.000001102 55.0
BYD3_k127_441998_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 362.0
BYD3_k127_441998_3 Permease YjgP YjgQ family protein K07091,K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 353.0
BYD3_k127_441998_4 Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001808 276.0
BYD3_k127_441998_5 GTP binding K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005917 275.0
BYD3_k127_441998_6 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000002132 251.0
BYD3_k127_441998_7 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000001402 186.0
BYD3_k127_441998_8 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000000000001531 183.0
BYD3_k127_441998_9 histone H2A K63-linked ubiquitination K10914 - - 0.000000000000000000000000000000000000000003486 164.0
BYD3_k127_4452462_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0 1424.0
BYD3_k127_4452462_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 442.0
BYD3_k127_4452462_2 Multi-sensor signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002597 289.0
BYD3_k127_4452462_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002173 254.0
BYD3_k127_4452462_4 Stage II sporulation protein E - - - 0.000000000000000000000000000000000000000000000000000000000000000000004308 242.0
BYD3_k127_4452462_5 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.00000000000000000000000000000000000001157 169.0
BYD3_k127_4469352_0 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007307 461.0
BYD3_k127_4469352_1 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000753 422.0
BYD3_k127_4469352_2 PFAM asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005318 432.0
BYD3_k127_4469352_3 carbamoyl transferase, NodU family K00612 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 412.0
BYD3_k127_4469352_4 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003845 376.0
BYD3_k127_4469352_5 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009257 362.0
BYD3_k127_4469352_6 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004489 290.0
BYD3_k127_4469352_7 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000004886 156.0
BYD3_k127_4469352_8 transferase activity, transferring glycosyl groups K12994 - 2.4.1.349 0.0000000000000000000002051 115.0
BYD3_k127_4469352_9 Polysaccharide biosynthesis protein K03328,K16695 - - 0.000000003565 70.0
BYD3_k127_4474667_0 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000867 610.0
BYD3_k127_4474667_1 Aldehyde dehydrogenase family K00128,K00135 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 595.0
BYD3_k127_4474667_2 Pyridoxal-phosphate dependent enzyme K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 379.0
BYD3_k127_4474667_3 - - - - 0.000000000000000000000000000000000008751 143.0
BYD3_k127_4474667_4 TIGRFAM Thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000000000001994 137.0
BYD3_k127_4474667_5 JAB/MPN domain - - - 0.000000000000000000000000000001262 134.0
BYD3_k127_4474667_6 Subtilase family - - - 0.000000000000000000000000893 124.0
BYD3_k127_4474667_7 transposition, DNA-mediated K02342 - 2.7.7.7 0.00000000000000004258 92.0
BYD3_k127_4554714_0 DNA recombination protein RmuC K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 306.0
BYD3_k127_4554714_1 Protein of unknown function (DUF4013) - - - 0.00000001752 66.0
BYD3_k127_4561429_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K04618 - 1.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 337.0
BYD3_k127_4561429_1 Aldo/keto reductase family K05275 - 1.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 301.0
BYD3_k127_4561429_2 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000001144 182.0
BYD3_k127_4561429_3 Domain of unknown function (DUF1929) - - - 0.000000003015 58.0
BYD3_k127_4599006_0 Transporter K03305 - - 9.827e-237 739.0
BYD3_k127_4599006_1 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 333.0
BYD3_k127_4599006_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001011 252.0
BYD3_k127_4599006_3 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000000000001034 218.0
BYD3_k127_4599006_4 - - - - 0.00000000000000000000000004707 123.0
BYD3_k127_4601527_0 Belongs to the Orn Lys Arg decarboxylase class-II family K00928,K12526 - 2.7.2.4,4.1.1.20 7.156e-224 730.0
BYD3_k127_4601527_1 A G-specific K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005855 294.0
BYD3_k127_4601527_2 Ferredoxin - - - 0.00000000000000000000000000000000001737 143.0
BYD3_k127_4601527_3 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000009626 135.0
BYD3_k127_4601527_4 NUDIX domain - - - 0.00000000000000009103 85.0
BYD3_k127_4601527_5 COG3119 Arylsulfatase A and related enzymes - - - 0.0000000000000005589 94.0
BYD3_k127_4604625_0 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002631 276.0
BYD3_k127_4604625_1 Peptidase family M28 K05994 - 3.4.11.10 0.000000000000000000000000000000000000000000000000000000000000000000000003176 266.0
BYD3_k127_4604625_2 protein conserved in bacteria K09797 - - 0.000000000000000000000000000000000000000000000000000002421 204.0
BYD3_k127_4604625_3 peroxiredoxin activity - - - 0.0000000000000000000000000000000002393 141.0
BYD3_k127_4604625_4 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000363 124.0
BYD3_k127_4604625_5 Putative metal-binding motif - - - 0.0000000000000000000153 102.0
BYD3_k127_46084_0 Glycogen debranching enzyme - - - 0.0 1045.0
BYD3_k127_4623901_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008724 466.0
BYD3_k127_4623901_1 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000001403 170.0
BYD3_k127_4623901_2 - - - - 0.0000000000000000000000001156 115.0
BYD3_k127_4623901_3 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000000006248 82.0
BYD3_k127_4623901_4 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.0005255 52.0
BYD3_k127_4644607_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 6.908e-308 955.0
BYD3_k127_4644607_1 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 1.342e-261 821.0
BYD3_k127_4644607_10 Transport permease protein K01992 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006855,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0015562,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0033554,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0071944 - 0.0000000000000000009148 87.0
BYD3_k127_4644607_11 Belongs to the peptidase S1C family K04771,K04772 - 3.4.21.107 0.00000000000006429 85.0
BYD3_k127_4644607_12 PFAM Peptidase M16 K07263 - - 0.00000001389 68.0
BYD3_k127_4644607_13 transposition, DNA-mediated K02342 - 2.7.7.7 0.0000000229 60.0
BYD3_k127_4644607_14 - - - - 0.0000002343 58.0
BYD3_k127_4644607_15 transposition, DNA-mediated K02342 - 2.7.7.7 0.000376 50.0
BYD3_k127_4644607_2 FtsX-like permease family K02004 - - 4.384e-223 723.0
BYD3_k127_4644607_3 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 587.0
BYD3_k127_4644607_4 Lipocalin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005774 392.0
BYD3_k127_4644607_5 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001085 280.0
BYD3_k127_4644607_6 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004919 266.0
BYD3_k127_4644607_7 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000001355 186.0
BYD3_k127_4644607_8 Methyltransferase domain - - - 0.000000000000000000000000000000000000000004528 172.0
BYD3_k127_4644607_9 Copper/zinc superoxide dismutase (SODC) K04565 - 1.15.1.1 0.0000000000000000000000000000006994 132.0
BYD3_k127_4646651_0 Tricorn protease homolog K08676 - - 0.0 1131.0
BYD3_k127_4646651_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 9.25e-207 655.0
BYD3_k127_4646651_10 FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000261 266.0
BYD3_k127_4646651_11 PFAM Aminotransferase class I and II K00812,K10907 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000001425 247.0
BYD3_k127_4646651_12 4-hydroxy-tetrahydrodipicolinate reductase K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000000000000005345 187.0
BYD3_k127_4646651_13 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000005174 176.0
BYD3_k127_4646651_14 Putative metal-binding motif - - - 0.0000000000000000000272 98.0
BYD3_k127_4646651_15 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.00000000000000006347 97.0
BYD3_k127_4646651_16 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000357 78.0
BYD3_k127_4646651_17 PBS lyase HEAT-like repeat - - - 0.0000005668 61.0
BYD3_k127_4646651_2 cellulase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004119 407.0
BYD3_k127_4646651_3 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 362.0
BYD3_k127_4646651_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 355.0
BYD3_k127_4646651_5 Amino acid kinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009436 339.0
BYD3_k127_4646651_6 Tetrahydrodipicolinate N-succinyltransferase N-terminal K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001046 299.0
BYD3_k127_4646651_7 Putative metal-binding motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003475 289.0
BYD3_k127_4646651_8 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000001395 273.0
BYD3_k127_4646651_9 3'-5' exonuclease K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000002206 258.0
BYD3_k127_4659645_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 576.0
BYD3_k127_4659645_1 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 338.0
BYD3_k127_4659645_2 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.000000000000000000000000000000000000008367 167.0
BYD3_k127_4659645_3 outer membrane lipoprotein carrier protein LolA K03634 - - 0.00007471 53.0
BYD3_k127_4663965_0 PFAM major facilitator superfamily MFS_1 K08217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004992 322.0
BYD3_k127_4663965_1 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000002814 201.0
BYD3_k127_4663965_2 - - - - 0.00000000000000000000000000000000000000000000000785 179.0
BYD3_k127_4663965_3 amine dehydrogenase activity - - - 0.0000000000000000001169 102.0
BYD3_k127_4663965_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family K13687 - - 0.000000000001169 75.0
BYD3_k127_4663965_5 Helix-turn-helix domain - - - 0.00000001476 64.0
BYD3_k127_4666977_0 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 588.0
BYD3_k127_4666977_1 tRNA (guanine-N7-)-methyltransferase activity K03439,K18846 - 2.1.1.180,2.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000321 525.0
BYD3_k127_4666977_2 tRNA (guanine-N7-)-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 511.0
BYD3_k127_4666977_3 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 461.0
BYD3_k127_4666977_4 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 368.0
BYD3_k127_4666977_5 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 353.0
BYD3_k127_4666977_6 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000006491 205.0
BYD3_k127_4666977_7 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000004603 194.0
BYD3_k127_4666977_8 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000005686 177.0
BYD3_k127_4666977_9 ApaG domain K06195 - - 0.000000000000000000000000000000000000000001008 180.0
BYD3_k127_4683000_0 AIPR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 561.0
BYD3_k127_4683000_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000001713 228.0
BYD3_k127_4683000_2 PFAM OsmC family protein - - - 0.000000000000000000000003791 119.0
BYD3_k127_4683000_4 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.000000000001516 67.0
BYD3_k127_4683000_5 self proteolysis - - - 0.00000000002759 73.0
BYD3_k127_4683000_6 - - - - 0.00000002089 67.0
BYD3_k127_4701122_0 PFAM Ribonuclease BN-like family K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 322.0
BYD3_k127_4701122_1 Doubled CXXCH motif (Paired_CXXCH_1) K08354 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006855 279.0
BYD3_k127_4701122_2 Putative outer membrane beta-barrel porin, MtrB/PioB K22110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001151 271.0
BYD3_k127_4701122_3 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000000001053 240.0
BYD3_k127_4701122_4 hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000001039 156.0
BYD3_k127_4701122_5 Putative metal-binding motif - - - 0.0000000000000000000000000000000000001208 165.0
BYD3_k127_4701122_6 Putative restriction endonuclease - - - 0.000000000000000000000000000000001764 135.0
BYD3_k127_4701122_7 amine dehydrogenase activity - - - 0.00000000000000000000000000003504 124.0
BYD3_k127_4701122_8 regulation of canonical Wnt signaling pathway involved in osteoblast differentiation - - - 0.0000000000000000000000000005405 132.0
BYD3_k127_4701122_9 bacterial-type flagellum-dependent cell motility - - - 0.00000004632 67.0
BYD3_k127_4716433_0 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 358.0
BYD3_k127_4716433_1 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009085 330.0
BYD3_k127_4716433_2 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002374 275.0
BYD3_k127_4728504_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01847,K01848 - 5.4.99.2 3.949e-214 695.0
BYD3_k127_4728504_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 400.0
BYD3_k127_4728504_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007789 352.0
BYD3_k127_4728504_3 Belongs to the ABC transporter superfamily K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009483 356.0
BYD3_k127_4728504_4 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 338.0
BYD3_k127_4728504_5 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 297.0
BYD3_k127_4728504_6 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000001824 186.0
BYD3_k127_4873356_0 DNA polymerase K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0 1146.0
BYD3_k127_4873356_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 6.801e-196 635.0
BYD3_k127_4873356_10 ArgK protein K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009599 317.0
BYD3_k127_4873356_11 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007439 310.0
BYD3_k127_4873356_12 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001185 271.0
BYD3_k127_4873356_13 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000006035 265.0
BYD3_k127_4873356_14 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002599 258.0
BYD3_k127_4873356_15 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000003374 253.0
BYD3_k127_4873356_16 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000007649 242.0
BYD3_k127_4873356_17 Ribosomal RNA adenine dimethylases K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000002714 199.0
BYD3_k127_4873356_18 lipolytic protein G-D-S-L family K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.0000000000000000000000000000000000000000000000003041 189.0
BYD3_k127_4873356_19 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000000003129 188.0
BYD3_k127_4873356_2 adenosylhomocysteinase activity K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 623.0
BYD3_k127_4873356_20 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000674 194.0
BYD3_k127_4873356_21 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000004861 171.0
BYD3_k127_4873356_22 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000002028 175.0
BYD3_k127_4873356_23 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.0000000000000000000000000000000000000000667 172.0
BYD3_k127_4873356_24 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000004459 143.0
BYD3_k127_4873356_25 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000007343 141.0
BYD3_k127_4873356_26 COG0346 Lactoylglutathione lyase and related lyases K05606 - 5.1.99.1 0.00000000000000000000000000000005386 143.0
BYD3_k127_4873356_27 Transmembrane and TPR repeat-containing protein - - - 0.0000000000000000000006282 112.0
BYD3_k127_4873356_28 bacterial OsmY and nodulation domain K04065 - - 0.00000000000000002659 88.0
BYD3_k127_4873356_29 Lipopolysaccharide-assembly - - - 0.0000000000000002644 89.0
BYD3_k127_4873356_3 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 550.0
BYD3_k127_4873356_30 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000009133 89.0
BYD3_k127_4873356_31 Two component signalling adaptor domain K03408 - - 0.000003341 55.0
BYD3_k127_4873356_4 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 538.0
BYD3_k127_4873356_5 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006798 435.0
BYD3_k127_4873356_6 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 428.0
BYD3_k127_4873356_7 pfkB family carbohydrate kinase K00852,K00856 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004001,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005975,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019200,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032552,GO:0032553,GO:0032554,GO:0032555,GO:0032559,GO:0032560,GO:0032561,GO:0032567,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046390,GO:0046483,GO:0046835,GO:0046872,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.15,2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 372.0
BYD3_k127_4873356_8 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 357.0
BYD3_k127_4873356_9 Threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 340.0
BYD3_k127_4873502_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 2.299e-280 878.0
BYD3_k127_4873502_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 1.047e-249 803.0
BYD3_k127_4873502_10 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 374.0
BYD3_k127_4873502_11 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 333.0
BYD3_k127_4873502_12 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 317.0
BYD3_k127_4873502_13 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006415 306.0
BYD3_k127_4873502_14 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 304.0
BYD3_k127_4873502_15 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019534,GO:0019904,GO:0022857,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000364 297.0
BYD3_k127_4873502_16 Competence-damaged protein K03742 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000708 302.0
BYD3_k127_4873502_17 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002904 269.0
BYD3_k127_4873502_18 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000001325 243.0
BYD3_k127_4873502_19 response regulator K07713 - - 0.00000000000000000000000000000000000000000000000000000000007702 222.0
BYD3_k127_4873502_2 Heat shock 70 kDa protein K04043 - - 2.138e-228 734.0
BYD3_k127_4873502_20 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000005928 214.0
BYD3_k127_4873502_21 Riboflavin synthase K00793 GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 0.0000000000000000000000000000000000000000000000000001191 192.0
BYD3_k127_4873502_22 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000007544 184.0
BYD3_k127_4873502_23 capsular polysaccharide biosynthesis protein K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000001248 183.0
BYD3_k127_4873502_24 MotA/TolQ/ExbB proton channel family K03562 - - 0.00000000000000000000000000000000000000000000006051 178.0
BYD3_k127_4873502_25 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000003554 167.0
BYD3_k127_4873502_26 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000000000001634 176.0
BYD3_k127_4873502_27 Biotin/lipoate A/B protein ligase family K03800 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 6.3.1.20 0.00000000000000000000000000000000000000001848 166.0
BYD3_k127_4873502_28 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0008150,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.0000000000000000000000000000000000000001382 153.0
BYD3_k127_4873502_29 Belongs to the peptidase S8 family K13276 - - 0.0000000000000000000000000000000000000008979 169.0
BYD3_k127_4873502_3 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 576.0
BYD3_k127_4873502_30 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000001203 167.0
BYD3_k127_4873502_31 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000004161 155.0
BYD3_k127_4873502_32 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.000000000000000000000000000000000001635 157.0
BYD3_k127_4873502_33 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000000000000000000000002935 134.0
BYD3_k127_4873502_34 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000157 149.0
BYD3_k127_4873502_35 Methylates ribosomal protein L11 K02687 - - 0.000000000000000000000000000000004845 143.0
BYD3_k127_4873502_36 diguanylate cyclase - - - 0.000000000000000000000000000000005094 146.0
BYD3_k127_4873502_37 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000003559 135.0
BYD3_k127_4873502_38 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000001106 139.0
BYD3_k127_4873502_39 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000005806 134.0
BYD3_k127_4873502_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 544.0
BYD3_k127_4873502_40 Belongs to the UPF0109 family K06960 - - 0.0000000000000000000000002984 111.0
BYD3_k127_4873502_41 Outer membrane lipoprotein - - - 0.0000000000000000000000006485 119.0
BYD3_k127_4873502_42 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000007724 118.0
BYD3_k127_4873502_43 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism - - - 0.0000000000000000000001796 106.0
BYD3_k127_4873502_44 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000003809 92.0
BYD3_k127_4873502_45 COG0517 FOG CBS domain - - - 0.00000000000000000804 92.0
BYD3_k127_4873502_46 methylamine metabolic process - - - 0.000000000000000193 92.0
BYD3_k127_4873502_47 Rhodanese Homology Domain - - - 0.000000000000004789 85.0
BYD3_k127_4873502_48 Glycosyl transferase family 41 K09667 - 2.4.1.255 0.0000000000002463 83.0
BYD3_k127_4873502_49 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 - - 0.000000000002887 76.0
BYD3_k127_4873502_5 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 545.0
BYD3_k127_4873502_50 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000072 72.0
BYD3_k127_4873502_51 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000001049 66.0
BYD3_k127_4873502_52 - - - - 0.00000005012 67.0
BYD3_k127_4873502_53 TonB C terminal K03646,K03832 - - 0.0000006655 61.0
BYD3_k127_4873502_54 regulation of DNA repair K03565 GO:0003674,GO:0005575,GO:0005623,GO:0005886,GO:0006282,GO:0008150,GO:0016020,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0044464,GO:0048583,GO:0050789,GO:0050790,GO:0050794,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0065009,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0098772,GO:2001020 - 0.00002035 53.0
BYD3_k127_4873502_55 nucleotide phosphatase activity, acting on free nucleotides - - - 0.00007868 55.0
BYD3_k127_4873502_6 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 522.0
BYD3_k127_4873502_7 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000869 497.0
BYD3_k127_4873502_8 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 394.0
BYD3_k127_4873502_9 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 379.0
BYD3_k127_4894672_0 iron assimilation - - - 1.551e-209 659.0
BYD3_k127_4894672_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000961 523.0
BYD3_k127_4902442_0 Domain of unknown function (DUF4162) K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004611 332.0
BYD3_k127_4902442_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 306.0
BYD3_k127_4902442_2 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006454 275.0
BYD3_k127_4902442_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001557 273.0
BYD3_k127_4902442_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000595 251.0
BYD3_k127_4902442_5 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000001166 233.0
BYD3_k127_4902442_6 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0070930,GO:0071704,GO:0097159,GO:1901363,GO:1901564 - 0.000000000000000000000000000000000000000000001442 169.0
BYD3_k127_4902442_7 - - - - 0.0000000000000677 83.0
BYD3_k127_4902442_8 YceI-like domain - - - 0.0000003309 61.0
BYD3_k127_4904993_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.115e-229 735.0
BYD3_k127_4904993_1 Saccharopine dehydrogenase NADP binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 359.0
BYD3_k127_4904993_10 PFAM Haloacid dehalogenase domain protein hydrolase K01079 - 3.1.3.3 0.0000000000371 69.0
BYD3_k127_4904993_11 PFAM Cupin 2, conserved barrel - - - 0.0006472 48.0
BYD3_k127_4904993_2 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 342.0
BYD3_k127_4904993_3 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004057 307.0
BYD3_k127_4904993_4 CAAX protease self-immunity - - - 0.000000000000000000000000000000000000000000000000000000000000000001786 235.0
BYD3_k127_4904993_5 PFAM Proprotein convertase P-domain - - - 0.000000000000000000000000000000000000000000000000000002456 219.0
BYD3_k127_4904993_6 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000004755 194.0
BYD3_k127_4904993_7 Belongs to the DNA glycosylase MPG family K03652 GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 0.000000000000000000000000000000000000001017 154.0
BYD3_k127_4904993_8 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000001591 131.0
BYD3_k127_4904993_9 - - - - 0.00000000000000003386 83.0
BYD3_k127_4913948_0 Carbamoyltransferase C-terminus K00612 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 502.0
BYD3_k127_4913948_1 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 326.0
BYD3_k127_4913948_10 - - - - 0.000005072 56.0
BYD3_k127_4913948_2 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005949 288.0
BYD3_k127_4913948_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000005435 247.0
BYD3_k127_4913948_4 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000002362 199.0
BYD3_k127_4913948_5 lactoylglutathione lyase activity K00941,K01724,K01759,K07032,K08234 - 2.7.1.49,2.7.4.7,4.2.1.96,4.4.1.5 0.00000000000000000000009306 107.0
BYD3_k127_4913948_6 - - - - 0.0000000000000000000001434 107.0
BYD3_k127_4913948_7 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000002781 108.0
BYD3_k127_4913948_8 Dictyostelium (slime mold) repeat - GO:0003674,GO:0004857,GO:0008150,GO:0030234,GO:0030587,GO:0031153,GO:0032502,GO:0043086,GO:0044092,GO:0048856,GO:0050790,GO:0051703,GO:0051704,GO:0065007,GO:0065009,GO:0090702,GO:0098772,GO:0099120 - 0.000000000000000001089 100.0
BYD3_k127_4913948_9 - - - - 0.000000000001212 68.0
BYD3_k127_4924622_0 FAD-NAD(P)-binding K01854 - 5.4.99.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003482 574.0
BYD3_k127_4924622_1 beta-glucosidase activity K05350 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 459.0
BYD3_k127_4924622_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006161 450.0
BYD3_k127_4924622_3 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P) K00849 - 2.7.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000089 299.0
BYD3_k127_4924622_4 Glycosyl hydrolases family 43 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002938 293.0
BYD3_k127_4924622_5 beta-glucosidase activity - - - 0.0000413 56.0
BYD3_k127_4931935_0 transcription factor binding K02584,K12146,K12266,K15836,K21009 GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001150,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0042802,GO:0043170,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 473.0
BYD3_k127_4931935_1 Flavin-binding monooxygenase-like K07222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007152 340.0
BYD3_k127_4931935_2 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000588 236.0
BYD3_k127_4931935_3 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000000000000008953 257.0
BYD3_k127_4931935_4 - - - - 0.000000000000000000000001347 112.0
BYD3_k127_4931935_5 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000002099 65.0
BYD3_k127_4941198_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 449.0
BYD3_k127_4941198_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 304.0
BYD3_k127_4941198_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000007477 239.0
BYD3_k127_4941198_3 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000004222 112.0
BYD3_k127_4945630_0 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005099 321.0
BYD3_k127_4945630_1 Polysaccharide deacetylase K01452 - 3.5.1.41 0.000000000000000000000000000000000000000000000000000000000000000004871 253.0
BYD3_k127_4945630_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000005554 239.0
BYD3_k127_4945630_3 AMP-binding enzyme - - - 0.00000000000000000000000000000000000000000000000000004367 204.0
BYD3_k127_4945630_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000001202 118.0
BYD3_k127_4945630_5 acyl carrier protein K02078 - - 0.0000000000000001618 87.0
BYD3_k127_4954908_0 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 359.0
BYD3_k127_4954908_1 long-chain fatty acid transport protein - - - 0.000000000000000000001021 104.0
BYD3_k127_4955862_0 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 525.0
BYD3_k127_4955862_1 Belongs to the peptidase M50B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 346.0
BYD3_k127_4955862_2 FAD binding domain K00103,K00279 - 1.1.3.8,1.5.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 297.0
BYD3_k127_4955862_3 AIR synthase related protein, N-terminal domain K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000001416 216.0
BYD3_k127_4955862_5 sterol carrier protein - - - 0.000005053 59.0
BYD3_k127_49892_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1338.0
BYD3_k127_49892_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005354 315.0
BYD3_k127_49892_10 cellulase activity - - - 0.000929 53.0
BYD3_k127_49892_2 Thrombospondin type 3 repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000741 304.0
BYD3_k127_49892_3 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000003097 239.0
BYD3_k127_49892_4 Alkylated DNA repair protein - - - 0.0000000000000000000000000000000000000000000000000000000000002574 220.0
BYD3_k127_49892_5 regulation of canonical Wnt signaling pathway involved in osteoblast differentiation - - - 0.0000000000000000000000000001665 130.0
BYD3_k127_49892_6 - - - - 0.000000000000000000000009992 113.0
BYD3_k127_49892_7 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000004646 113.0
BYD3_k127_49892_8 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K01179 - 3.2.1.4 0.00000000000000001804 98.0
BYD3_k127_49892_9 COG2133 Glucose sorbosone dehydrogenases - - - 0.00001071 58.0
BYD3_k127_5017416_0 Thrombospondin type 3 repeat - - - 0.000000000008372 72.0
BYD3_k127_5017416_1 ATPase activity - - - 0.000002855 60.0
BYD3_k127_5026148_0 Protein of unknown function (DUF3500) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003052 276.0
BYD3_k127_5026148_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000002542 154.0
BYD3_k127_5026148_2 DNA-templated transcription, initiation - - - 0.000000000000000000000000114 119.0
BYD3_k127_510335_0 Prokaryotic cytochrome b561 - - - 3.374e-248 783.0
BYD3_k127_510335_1 Pfam SNARE associated Golgi protein - - - 2.092e-198 643.0
BYD3_k127_510335_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009052 603.0
BYD3_k127_510335_3 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 364.0
BYD3_k127_510335_4 inositol 2-dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000823 180.0
BYD3_k127_510335_5 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000001429 183.0
BYD3_k127_510335_6 aminopeptidase - - - 0.00000000000000000000000006192 125.0
BYD3_k127_510335_7 Belongs to the ompA family - - - 0.00000000000000000000007678 100.0
BYD3_k127_510335_8 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000006883 76.0
BYD3_k127_519266_0 NAD(P)-binding Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 512.0
BYD3_k127_519266_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 349.0
BYD3_k127_519266_2 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 321.0
BYD3_k127_519266_3 pfam abc K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002216 278.0
BYD3_k127_519266_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001103 276.0
BYD3_k127_519266_5 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000003725 245.0
BYD3_k127_519266_6 conserved protein (COG2071) K09166 - - 0.000000000000000000000000000000000000000000000000000000000004899 224.0
BYD3_k127_519266_7 FR47-like protein - - - 0.0000000000000000000000000000000000000005508 156.0
BYD3_k127_519266_8 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000002492 167.0
BYD3_k127_519266_9 RNA recognition motif - - - 0.000000000000000000000000000006577 123.0
BYD3_k127_5197394_0 PFAM AMP-dependent synthetase and ligase - - - 0.0 1075.0
BYD3_k127_5197394_1 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009146 599.0
BYD3_k127_5197394_2 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 527.0
BYD3_k127_5197394_3 Tetratricopeptide repeats K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 439.0
BYD3_k127_5197394_4 - - - - 0.00000000000000000000000000000000000000003982 161.0
BYD3_k127_5197394_5 lipolytic protein G-D-S-L family - - - 0.00000000000000000000005762 112.0
BYD3_k127_5197394_6 exo-alpha-(2->6)-sialidase activity - - - 0.000000000005016 79.0
BYD3_k127_5197394_7 PFAM Tetratricopeptide repeat - - - 0.00000000008548 72.0
BYD3_k127_5197394_8 amine oxidase K00276 - 1.4.3.21 0.0000008939 57.0
BYD3_k127_5197394_9 Dienelactone hydrolase - - - 0.0004353 51.0
BYD3_k127_5222133_0 ATP-dependent DNA helicase K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004061 422.0
BYD3_k127_5222133_1 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000001254 252.0
BYD3_k127_5222133_10 DoxX-like family - - - 0.000000195 59.0
BYD3_k127_5222133_11 Putative zinc-finger - - - 0.000007154 56.0
BYD3_k127_5222133_12 - - - - 0.0000754 52.0
BYD3_k127_5222133_2 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000007563 240.0
BYD3_k127_5222133_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000002348 189.0
BYD3_k127_5222133_4 Sigma-70, region 4 K03088 GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000008132 145.0
BYD3_k127_5222133_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000001822 150.0
BYD3_k127_5222133_6 PAS fold K20960 - 2.7.7.65 0.000000000000000000000000000000003262 142.0
BYD3_k127_5222133_7 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000004422 124.0
BYD3_k127_5222133_8 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000000009291 122.0
BYD3_k127_5222133_9 Thrombospondin 4 K04659,K16857 GO:0000902,GO:0001932,GO:0001934,GO:0001936,GO:0001938,GO:0001968,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0003674,GO:0005102,GO:0005178,GO:0005488,GO:0005509,GO:0005515,GO:0005518,GO:0005539,GO:0005575,GO:0005576,GO:0005604,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005912,GO:0005924,GO:0005927,GO:0006928,GO:0006950,GO:0007155,GO:0007275,GO:0007399,GO:0007517,GO:0007610,GO:0008150,GO:0008201,GO:0008284,GO:0009653,GO:0009888,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0012505,GO:0014812,GO:0016043,GO:0016203,GO:0016477,GO:0016525,GO:0016528,GO:0016529,GO:0019220,GO:0019222,GO:0022008,GO:0022603,GO:0022607,GO:0022610,GO:0030030,GO:0030054,GO:0030055,GO:0030154,GO:0030182,GO:0030334,GO:0030335,GO:0031012,GO:0031175,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031594,GO:0032101,GO:0032103,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032879,GO:0032989,GO:0032990,GO:0032991,GO:0033554,GO:0033555,GO:0033627,GO:0034103,GO:0034976,GO:0035989,GO:0040011,GO:0040012,GO:0040017,GO:0042127,GO:0042325,GO:0042327,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043236,GO:0043237,GO:0043933,GO:0044085,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045202,GO:0045765,GO:0045937,GO:0046872,GO:0048265,GO:0048266,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048666,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050678,GO:0050679,GO:0050730,GO:0050731,GO:0050789,GO:0050793,GO:0050794,GO:0050839,GO:0050840,GO:0050896,GO:0050920,GO:0050921,GO:0051093,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051270,GO:0051272,GO:0051451,GO:0051674,GO:0051716,GO:0060255,GO:0060538,GO:0061061,GO:0061448,GO:0062023,GO:0065003,GO:0065007,GO:0070161,GO:0071603,GO:0071622,GO:0071624,GO:0071840,GO:0080090,GO:0090022,GO:0090023,GO:0090136,GO:0097367,GO:0098609,GO:0120036,GO:0120039,GO:1901342,GO:1901343,GO:1901681,GO:1902622,GO:1902624,GO:2000026,GO:2000145,GO:2000147,GO:2000181 - 0.0000000002927 74.0
BYD3_k127_5225818_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 389.0
BYD3_k127_5225818_1 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K00857,K01920,K01935 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.21,6.3.2.3,6.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002626 298.0
BYD3_k127_5225818_2 Serine aminopeptidase, S33 K06889 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0009605,GO:0009607,GO:0030312,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052561,GO:0052562,GO:0052564,GO:0052572,GO:0071944,GO:0075136 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002912 284.0
BYD3_k127_5225818_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145,K05829 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000016 213.0
BYD3_k127_5225818_4 Histidine kinase K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000009783 177.0
BYD3_k127_5225818_5 Regulates arginine biosynthesis genes K03402 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000002926 81.0
BYD3_k127_5225818_6 polysaccharide export protein K01991 - - 0.0000000000006652 74.0
BYD3_k127_5225818_7 aspartate ornithine carbamoyltransferase, carbamoyl-P binding domain K00609 - 2.1.3.2 0.0000004965 54.0
BYD3_k127_5232016_0 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004114 475.0
BYD3_k127_5232016_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 407.0
BYD3_k127_5232016_2 ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 338.0
BYD3_k127_5232016_3 glycosyl transferase family 39 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000001347 194.0
BYD3_k127_5232016_4 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0040007,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.00000000000000000000000000000000009846 140.0
BYD3_k127_5232016_6 Nucleoside-triphosphatase, cancer-related K06928 - 3.6.1.15 0.0009967 46.0
BYD3_k127_5268357_0 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 528.0
BYD3_k127_5268357_1 iron-nicotianamine transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 531.0
BYD3_k127_5268357_10 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000006374 253.0
BYD3_k127_5268357_11 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000001052 214.0
BYD3_k127_5268357_12 - - - - 0.000000000000000000000000000000000000000000000832 187.0
BYD3_k127_5268357_13 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000000000007222 148.0
BYD3_k127_5268357_14 B3/4 domain - - - 0.00000000000000000000000000000000000007624 159.0
BYD3_k127_5268357_15 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000001557 124.0
BYD3_k127_5268357_16 RNA polymerase sigma factor K03088 - - 0.00000000000000000000000000003442 126.0
BYD3_k127_5268357_17 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000003042 120.0
BYD3_k127_5268357_18 translation release factor activity K03265 - - 0.000000000000000000000000002785 126.0
BYD3_k127_5268357_19 - - - - 0.00000000000000002387 93.0
BYD3_k127_5268357_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 420.0
BYD3_k127_5268357_21 Glycosyl transferase family 2 - - - 0.0000001122 64.0
BYD3_k127_5268357_22 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000002587 63.0
BYD3_k127_5268357_23 Anti-sigma-K factor rskA - - - 0.00008871 55.0
BYD3_k127_5268357_24 - - - - 0.0004457 53.0
BYD3_k127_5268357_3 DNA RNA helicase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004752 432.0
BYD3_k127_5268357_4 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 434.0
BYD3_k127_5268357_5 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 372.0
BYD3_k127_5268357_6 NAD(P)H quinone oxidoreductase, PIG3 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 325.0
BYD3_k127_5268357_7 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000001352 272.0
BYD3_k127_5268357_8 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000235 245.0
BYD3_k127_5268357_9 PFAM RNA binding S1 domain protein K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000239 244.0
BYD3_k127_5272462_0 OPT oligopeptide transporter protein - - - 1.789e-251 812.0
BYD3_k127_5272462_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) - - - 7.725e-245 776.0
BYD3_k127_5272462_10 Domain of unknown function (DUF305) - - - 0.00000000000000000000000000000000000000000000000000000000000000000007581 233.0
BYD3_k127_5272462_11 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000001264 222.0
BYD3_k127_5272462_12 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000007688 214.0
BYD3_k127_5272462_13 PFAM OmpA MotB domain protein K03640 - - 0.00000000000000000000000000000002906 134.0
BYD3_k127_5272462_14 Protein conserved in bacteria - - - 0.00000000001375 79.0
BYD3_k127_5272462_15 Trypsin K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051603,GO:0061077,GO:0070011,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.107 0.0000000113 59.0
BYD3_k127_5272462_16 Mechanosensitive ion channel - - - 0.00000003307 55.0
BYD3_k127_5272462_17 Domain of unknown function (DUF4870) K09940 - - 0.00000122 57.0
BYD3_k127_5272462_18 Forms part of a two-component regulatory system AfsQ1 AfsQ2 involved in secondary metabolism - - - 0.0002776 49.0
BYD3_k127_5272462_2 Belongs to the RtcB family K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 606.0
BYD3_k127_5272462_3 Putative Na+/H+ antiporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 547.0
BYD3_k127_5272462_4 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006837 505.0
BYD3_k127_5272462_5 Surface antigen variable number K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 419.0
BYD3_k127_5272462_6 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 394.0
BYD3_k127_5272462_7 PFAM peptidase S1 and S6 chymotrypsin Hap - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 345.0
BYD3_k127_5272462_8 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 306.0
BYD3_k127_5272462_9 lipopolysaccharide transmembrane transporter activity K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006581 248.0
BYD3_k127_5305834_0 Sugar (and other) transporter - - - 0.0003207 53.0
BYD3_k127_5357084_0 - - - - 0.0000000000001311 80.0
BYD3_k127_5357084_1 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000004002 61.0
BYD3_k127_5478775_0 Polysulphide reductase, NrfD - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 518.0
BYD3_k127_5478775_1 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 347.0
BYD3_k127_5478775_10 Putative regulatory protein - - - 0.0000000911 59.0
BYD3_k127_5478775_11 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000007996 59.0
BYD3_k127_5478775_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002342 289.0
BYD3_k127_5478775_3 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000768 273.0
BYD3_k127_5478775_4 Glycine cleavage H-protein - - - 0.00000000000000000000000000000000000000000000002214 181.0
BYD3_k127_5478775_5 - - - - 0.0000000000000000000000000000000000000003817 157.0
BYD3_k127_5478775_6 GYD domain - - - 0.0000000000000000000000000000000002898 138.0
BYD3_k127_5478775_7 Glycine cleavage H-protein - - - 0.00000000000000000002538 102.0
BYD3_k127_5478775_8 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000002022 91.0
BYD3_k127_5478775_9 Histidine kinase K07683 - 2.7.13.3 0.00000000003605 67.0
BYD3_k127_5540396_0 secondary active sulfate transmembrane transporter activity K03321 GO:0003333,GO:0003674,GO:0005215,GO:0005310,GO:0005326,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0008272,GO:0008509,GO:0008514,GO:0015075,GO:0015103,GO:0015116,GO:0015138,GO:0015141,GO:0015171,GO:0015172,GO:0015179,GO:0015183,GO:0015238,GO:0015318,GO:0015556,GO:0015698,GO:0015711,GO:0015740,GO:0015741,GO:0015744,GO:0015800,GO:0015807,GO:0015810,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070778,GO:0071422,GO:0071702,GO:0071705,GO:0071944,GO:0072348,GO:0098656,GO:0098660,GO:0098661,GO:1901682,GO:1902358,GO:1902475,GO:1903825,GO:1905039 - 7.127e-205 651.0
BYD3_k127_5540396_1 Signal Transduction Histidine Kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000002704 233.0
BYD3_k127_5540396_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000002808 92.0
BYD3_k127_5541823_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 0.0 1088.0
BYD3_k127_5541823_1 PFAM Na dependent nucleoside transporter K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 448.0
BYD3_k127_5541823_10 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.00000000000000000000000000000009554 127.0
BYD3_k127_5541823_11 - - - - 0.0000000000000000000000000000004373 142.0
BYD3_k127_5541823_12 DoxX - - - 0.000000000000000000000000000006577 123.0
BYD3_k127_5541823_13 SCO1/SenC K07152,K08976 - - 0.00000000000000000000000000002109 136.0
BYD3_k127_5541823_14 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000000007379 89.0
BYD3_k127_5541823_15 domain protein K20276 - - 0.00000000001171 79.0
BYD3_k127_5541823_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 424.0
BYD3_k127_5541823_3 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000001425 272.0
BYD3_k127_5541823_4 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004346 253.0
BYD3_k127_5541823_5 Tetratricopeptide repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001986 254.0
BYD3_k127_5541823_6 Membrane dipeptidase (Peptidase family M19) K01273,K01274 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000003134 227.0
BYD3_k127_5541823_7 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000001489 228.0
BYD3_k127_5541823_8 protein SCO1 SenC K07152 - - 0.00000000000000000000000000000000000000000005735 170.0
BYD3_k127_5541823_9 - - - - 0.00000000000000000000000000000000000000003346 159.0
BYD3_k127_5557600_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 528.0
BYD3_k127_5557600_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 360.0
BYD3_k127_5557600_10 3-dehydroquinate dehydratase activity K00014,K03785,K13832 GO:0000166,GO:0003674,GO:0003824,GO:0003855,GO:0004764,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009712,GO:0009713,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018958,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0042537,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046189,GO:0046278,GO:0046279,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901615,GO:1901617 1.1.1.25,4.2.1.10 0.000000000000000000000000000000000000000000001245 191.0
BYD3_k127_5557600_11 Uncharacterised nucleotidyltransferase - - - 0.0000362 55.0
BYD3_k127_5557600_12 DNA-directed 5'-3' RNA polymerase activity K03060 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.0009052 49.0
BYD3_k127_5557600_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006699 311.0
BYD3_k127_5557600_3 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000005368 229.0
BYD3_k127_5557600_4 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000002405 236.0
BYD3_k127_5557600_5 Stress-induced protein - - - 0.00000000000000000000000000000000000000000000000000002734 199.0
BYD3_k127_5557600_6 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000001293 192.0
BYD3_k127_5557600_7 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000003259 197.0
BYD3_k127_5557600_8 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000064 196.0
BYD3_k127_5557600_9 protein conserved in bacteria K09778 - - 0.0000000000000000000000000000000000000000000000009379 183.0
BYD3_k127_5571928_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000241 203.0
BYD3_k127_5571928_1 ECF sigma factor K03088 - - 0.0000000000000000000000000000001483 132.0
BYD3_k127_5571928_2 anti-sigma regulatory factor, serine threonine protein kinase K04757 - 2.7.11.1 0.0000000000000005878 83.0
BYD3_k127_5571928_3 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749,K06378 - - 0.000001278 59.0
BYD3_k127_5573110_0 cellulose binding - - - 1.328e-229 754.0
BYD3_k127_5573110_1 Peptidase m28 - - - 2.744e-195 626.0
BYD3_k127_5573110_10 Asparagine synthase K06864 - - 0.000000000000000000000000000000000000000000000000000000000000005266 228.0
BYD3_k127_5573110_11 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000000000000000001318 241.0
BYD3_k127_5573110_12 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000007674 220.0
BYD3_k127_5573110_13 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000000000000000000000000000000000000008823 223.0
BYD3_k127_5573110_14 COG NOG14600 non supervised orthologous group - - - 0.0000000000000000000000000000000000000000000000000000001103 196.0
BYD3_k127_5573110_15 iron dependent repressor K03709 - - 0.000000000000000000000000000000000000000000000000000008607 207.0
BYD3_k127_5573110_16 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000133 196.0
BYD3_k127_5573110_17 protein phosphatase 2C domain protein K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000013 204.0
BYD3_k127_5573110_18 transport systems K02033 - - 0.00000000000000000000000000000000000000000000000000217 208.0
BYD3_k127_5573110_19 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000006925 168.0
BYD3_k127_5573110_2 COG1228 Imidazolonepropionase and related K01443 - 3.5.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009413 625.0
BYD3_k127_5573110_20 - - - - 0.00000000000000000000000000000000000001715 146.0
BYD3_k127_5573110_21 - - - - 0.0000000000000000000000000000000000185 153.0
BYD3_k127_5573110_22 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000002893 129.0
BYD3_k127_5573110_23 - - - - 0.000000000000000000000000000009006 119.0
BYD3_k127_5573110_24 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000001685 120.0
BYD3_k127_5573110_25 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000008391 134.0
BYD3_k127_5573110_26 COG NOG15344 non supervised orthologous group - - - 0.0000000000000000000000001572 106.0
BYD3_k127_5573110_27 - - - - 0.00000000000000000001468 94.0
BYD3_k127_5573110_28 COG NOG15344 non supervised orthologous group - - - 0.00000000000000000004781 94.0
BYD3_k127_5573110_29 Domain of unknown function (DUF4115) K15539 - - 0.0000000000000003607 85.0
BYD3_k127_5573110_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000939 574.0
BYD3_k127_5573110_30 - - - - 0.0000000000000006141 88.0
BYD3_k127_5573110_32 diguanylate cyclase - - - 0.00000000000001691 88.0
BYD3_k127_5573110_33 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000006938 81.0
BYD3_k127_5573110_34 - - - - 0.00000000004487 66.0
BYD3_k127_5573110_35 TPR repeat-containing protein - - - 0.00000000005609 76.0
BYD3_k127_5573110_36 - - - - 0.00000000009533 63.0
BYD3_k127_5573110_37 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K05970 - 3.1.1.53 0.000000001431 72.0
BYD3_k127_5573110_38 ORF located using Blastx - - - 0.000000003351 58.0
BYD3_k127_5573110_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 414.0
BYD3_k127_5573110_43 - - - - 0.000000389 53.0
BYD3_k127_5573110_44 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000008271 54.0
BYD3_k127_5573110_45 ORF located using Blastx - - - 0.000004012 53.0
BYD3_k127_5573110_46 OmpW family K07275,K16079 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000008319 57.0
BYD3_k127_5573110_48 Cna B domain protein - - - 0.0009369 52.0
BYD3_k127_5573110_5 SpoIVB peptidase S55 K00973,K02414,K21449 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006331 342.0
BYD3_k127_5573110_6 Transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 301.0
BYD3_k127_5573110_7 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000007306 280.0
BYD3_k127_5573110_8 imidazolonepropionase activity K01443 - 3.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000006434 259.0
BYD3_k127_5573110_9 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.0000000000000000000000000000000000000000000000000000000000000000003443 262.0
BYD3_k127_5581255_0 lipid A biosynthesis acyltransferase - - - 0.0000000000003858 82.0
BYD3_k127_5609213_0 DEAD DEAH box helicase K03724 - - 1.529e-305 964.0
BYD3_k127_5609213_1 Tryptophan-rich sensory protein K05770 - - 0.000000000000002689 76.0
BYD3_k127_5609213_2 protein conserved in bacteria K09790 - - 0.000000000000937 73.0
BYD3_k127_5609213_3 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0001966 51.0
BYD3_k127_5619785_0 Metallopeptidase family M24 K01262 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0016787,GO:0019538,GO:0030145,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000009695 265.0
BYD3_k127_5619785_1 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000001485 186.0
BYD3_k127_5619785_2 enoyl-(acyl-carrier-protein) reductase II K02371 - 1.3.1.9 0.000000000000000005281 94.0
BYD3_k127_5619785_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000009873 82.0
BYD3_k127_5623797_0 4Fe-4S dicluster domain K00184 - - 1.74e-266 871.0
BYD3_k127_5623797_1 Polysulphide reductase K00185 - - 1.036e-221 698.0
BYD3_k127_5623797_10 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0006807,GO:0008150,GO:0008152,GO:0016491,GO:0016661,GO:0016662,GO:0020037,GO:0042279,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046906,GO:0048037,GO:0055114,GO:0097159,GO:0097164,GO:0098809,GO:1901363 - 0.000000000000000000000000000000000000000002659 177.0
BYD3_k127_5623797_11 cell redox homeostasis K02199,K03671 - - 0.00000000000000000000000000000003069 132.0
BYD3_k127_5623797_12 - - - - 0.0000000000000000000000001028 115.0
BYD3_k127_5623797_13 - - - - 0.0000000000004481 74.0
BYD3_k127_5623797_2 Glycosyl transferase family 1 - - - 8.378e-201 641.0
BYD3_k127_5623797_3 Formamidopyrimidine-DNA glycosylase N-terminal domain K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 379.0
BYD3_k127_5623797_4 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 296.0
BYD3_k127_5623797_5 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002451 257.0
BYD3_k127_5623797_6 Protein of unknown function (DUF3341) - - - 0.0000000000000000000000000000000000000000000000000000004559 201.0
BYD3_k127_5623797_7 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000003751 201.0
BYD3_k127_5623797_8 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000000000000000000001323 190.0
BYD3_k127_5623797_9 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000003487 178.0
BYD3_k127_5640338_0 Cytochrome C and Quinol oxidase polypeptide I K15862 - 1.9.3.1 0.0 1065.0
BYD3_k127_5640338_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 419.0
BYD3_k127_5640338_2 IG-like fold at C-terminal of FixG, putative oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000814 388.0
BYD3_k127_5640338_3 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 340.0
BYD3_k127_5640338_4 PFAM Cytochrome c, class I K00406 - - 0.00000000000000000000000000000000000000000001407 170.0
BYD3_k127_5640338_5 PFAM Cyclic nucleotide-binding K10914 - - 0.000000000000000000000000000000003985 138.0
BYD3_k127_5640338_6 Fungalysin metallopeptidase (M36) - - - 0.000000002196 72.0
BYD3_k127_5640338_7 zinc metalloprotease whose natural substrate is K06974 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 - 0.0000004044 61.0
BYD3_k127_5691531_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 466.0
BYD3_k127_5691531_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000691 312.0
BYD3_k127_5691531_2 ABC transporter, ATP-binding protein K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009896 298.0
BYD3_k127_5691531_3 Zinc-binding dehydrogenase K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002426 273.0
BYD3_k127_5699600_0 Carbamoyl-phosphate synthetase large chain domain protein K01955 - 6.3.5.5 0.0 1424.0
BYD3_k127_5699600_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 469.0
BYD3_k127_5699600_10 Lipid A biosynthesis K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000009392 201.0
BYD3_k127_5699600_11 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000001395 192.0
BYD3_k127_5699600_12 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000003889 159.0
BYD3_k127_5699600_13 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000007723 146.0
BYD3_k127_5699600_15 deoxyhypusine monooxygenase activity - - - 0.00002378 57.0
BYD3_k127_5699600_2 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 337.0
BYD3_k127_5699600_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000643 285.0
BYD3_k127_5699600_4 Phosphomethylpyrimidine kinase K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000113 264.0
BYD3_k127_5699600_5 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000001754 255.0
BYD3_k127_5699600_6 D,d-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000001732 240.0
BYD3_k127_5699600_7 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000002517 209.0
BYD3_k127_5699600_8 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008654,GO:0009029,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0046401,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.7.1.130 0.00000000000000000000000000000000000000000000000000000001095 217.0
BYD3_k127_5699600_9 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000001027 185.0
BYD3_k127_5706938_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 3.413e-296 939.0
BYD3_k127_5706938_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 8.511e-266 830.0
BYD3_k127_5706938_10 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008114 343.0
BYD3_k127_5706938_11 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009301 299.0
BYD3_k127_5706938_12 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008997 280.0
BYD3_k127_5706938_13 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001447 289.0
BYD3_k127_5706938_14 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002466 269.0
BYD3_k127_5706938_15 Protein export membrane protein K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000108 278.0
BYD3_k127_5706938_16 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0016311,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0031224,GO:0031226,GO:0042221,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050380,GO:0050896,GO:0071944 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000001507 265.0
BYD3_k127_5706938_17 Sulfotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000001881 246.0
BYD3_k127_5706938_18 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000002844 241.0
BYD3_k127_5706938_19 Sulfatase - - - 0.000000000000000000000000000000000000000000000000004299 202.0
BYD3_k127_5706938_2 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 3.498e-207 655.0
BYD3_k127_5706938_20 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000006125 194.0
BYD3_k127_5706938_21 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.0000000000000000000000000000000000000000000000000756 191.0
BYD3_k127_5706938_22 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000001295 168.0
BYD3_k127_5706938_23 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000339 166.0
BYD3_k127_5706938_24 RNA recognition motif - - - 0.00000000000000000000000000000008123 128.0
BYD3_k127_5706938_25 chaperone-mediated protein folding - - - 0.00000000000000000000005538 114.0
BYD3_k127_5706938_26 Transcriptional regulator - - - 0.0000000000000000000001179 108.0
BYD3_k127_5706938_27 RHS repeat-associated core domain - - - 0.00000000000006306 87.0
BYD3_k127_5706938_28 PFAM AsmA family K07289 - - 0.000000000007315 79.0
BYD3_k127_5706938_29 Rhomboid family - - - 0.00000003014 68.0
BYD3_k127_5706938_3 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K11381 - 1.2.4.4 8.217e-206 662.0
BYD3_k127_5706938_30 Parallel beta-helix repeats - - - 0.000002938 60.0
BYD3_k127_5706938_4 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00819,K00821 GO:0003674,GO:0003824,GO:0004587,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.6.1.11,2.6.1.13,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 588.0
BYD3_k127_5706938_5 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 507.0
BYD3_k127_5706938_6 SMART Integrin alpha beta-propellor repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 497.0
BYD3_k127_5706938_7 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016020,GO:0016829,GO:0016840,GO:0016843,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0040007,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 421.0
BYD3_k127_5706938_8 Belongs to the carbamate kinase family K00926 - 2.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007334 392.0
BYD3_k127_5706938_9 Alanine-glyoxylate amino-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 366.0
BYD3_k127_5711943_0 PFAM Proprotein convertase P-domain - - - 0.00000000000000000000000000000000000000000000000000000000001211 237.0
BYD3_k127_5711943_1 Domain of unknown function (DUF4143) K07133 - - 0.0001193 46.0
BYD3_k127_5720396_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 555.0
BYD3_k127_5720396_1 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000002717 98.0
BYD3_k127_5742248_0 Tricorn protease PDZ domain - - - 0.0 1141.0
BYD3_k127_5742248_1 GlcNAc-PI de-N-acetylase - - - 2.133e-228 752.0
BYD3_k127_5742248_10 amine dehydrogenase activity - - - 0.00000000148 63.0
BYD3_k127_5742248_2 Sodium:solute symporter family - - - 4.667e-196 652.0
BYD3_k127_5742248_3 Bacillithiol biosynthesis BshC K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 355.0
BYD3_k127_5742248_4 Glycosyl transferase 4-like K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 329.0
BYD3_k127_5742248_5 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009983 293.0
BYD3_k127_5742248_6 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002159 286.0
BYD3_k127_5742248_7 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000864 258.0
BYD3_k127_5742248_8 GlcNAc-PI de-N-acetylase K01463 - - 0.0000000000000000000000000000000000000000000000000000000000000000003155 251.0
BYD3_k127_5742248_9 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000006628 228.0
BYD3_k127_577264_0 Amidohydrolase family - - - 2.095e-280 904.0
BYD3_k127_577264_1 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 342.0
BYD3_k127_577264_2 glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000001878 244.0
BYD3_k127_577264_3 Domain of unknown function (DUF4160) - - - 0.00000000000000000000004912 100.0
BYD3_k127_577264_4 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.0000000000000000006507 97.0
BYD3_k127_577264_5 - - - - 0.00000000004658 73.0
BYD3_k127_577264_6 Protein of unknown function (DUF2442) - - - 0.0000007958 57.0
BYD3_k127_5793710_0 Aconitase C-terminal domain K01681 - 4.2.1.3 2.838e-313 978.0
BYD3_k127_5793710_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 631.0
BYD3_k127_5793710_10 Oxidoreductase molybdopterin binding domain K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003401 287.0
BYD3_k127_5793710_11 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003524 267.0
BYD3_k127_5793710_12 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000001272 256.0
BYD3_k127_5793710_13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.00000000000000000000000000000000000000000000000000003499 192.0
BYD3_k127_5793710_14 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000007399 189.0
BYD3_k127_5793710_15 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000004484 191.0
BYD3_k127_5793710_16 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000976 184.0
BYD3_k127_5793710_17 Domain of unknown function (DUF1736) - - - 0.00000000000000000000000000000000000000000000291 186.0
BYD3_k127_5793710_18 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000005563 173.0
BYD3_k127_5793710_19 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000001645 136.0
BYD3_k127_5793710_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000626 558.0
BYD3_k127_5793710_21 HAD-hyrolase-like K07025 - - 0.0000000000000000000000000000001363 138.0
BYD3_k127_5793710_22 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000001888 131.0
BYD3_k127_5793710_23 Smr domain - - - 0.000000000000000000000000012 121.0
BYD3_k127_5793710_24 oxidoreductase activity - - - 0.000000000000000000000002941 115.0
BYD3_k127_5793710_25 sulfate ABC transporter, permease protein CysW K02047 - - 0.0000000000000000002075 88.0
BYD3_k127_5793710_28 Phosphate-starvation-inducible E - - - 0.00000000000001921 87.0
BYD3_k127_5793710_29 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000004127 84.0
BYD3_k127_5793710_3 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 466.0
BYD3_k127_5793710_30 YCII-related domain K09780 - - 0.000000002906 61.0
BYD3_k127_5793710_31 - - - - 0.0000000114 63.0
BYD3_k127_5793710_32 snoRNA binding - - - 0.00000003471 63.0
BYD3_k127_5793710_33 Transcriptional regulator - - - 0.00000004586 64.0
BYD3_k127_5793710_34 selT selW selH selenoprotein K07401 - - 0.000002326 51.0
BYD3_k127_5793710_35 Predicted membrane protein (DUF2231) - - - 0.00004705 51.0
BYD3_k127_5793710_36 membrane K15977 - - 0.0002329 50.0
BYD3_k127_5793710_4 histidine kinase HAMP region domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009969 434.0
BYD3_k127_5793710_5 PFAM peptidase S1 and S6 chymotrypsin Hap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007719 368.0
BYD3_k127_5793710_6 Bacterial regulatory protein, Fis family K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 381.0
BYD3_k127_5793710_7 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 338.0
BYD3_k127_5793710_8 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 323.0
BYD3_k127_5793710_9 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 327.0
BYD3_k127_58021_0 Nitronate monooxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 414.0
BYD3_k127_58021_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009354 427.0
BYD3_k127_58021_2 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 419.0
BYD3_k127_58021_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.0000000000000000000000000000003612 127.0
BYD3_k127_58021_4 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000001887 108.0
BYD3_k127_58021_5 Cytochrome P460 - - - 0.0000000000000001064 80.0
BYD3_k127_58021_6 COG1651 Protein-disulfide isomerase - - - 0.0002876 48.0
BYD3_k127_5851778_0 Glutamine amidotransferases class-II K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008101 589.0
BYD3_k127_5851778_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 407.0
BYD3_k127_5851778_2 PFAM Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000589 385.0
BYD3_k127_5851778_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000003452 162.0
BYD3_k127_5859052_0 peptidase S9 prolyl oligopeptidase active site - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 1.543e-288 904.0
BYD3_k127_5859052_1 xanthine dehydrogenase activity K04108 - 1.3.7.9 4.432e-272 869.0
BYD3_k127_5859052_10 Oxidoreductase molybdopterin binding domain K07147 - - 0.0000000000000000000000000000000000000000000000000000000000005153 231.0
BYD3_k127_5859052_11 PFAM EAL domain - - - 0.0000000000000000000000000000000000000000000000000000001177 208.0
BYD3_k127_5859052_12 PRC-barrel domain - - - 0.000000000000000000000000000007774 139.0
BYD3_k127_5859052_13 ribonuclease activity - - - 0.0000000000000000000000008197 113.0
BYD3_k127_5859052_14 toxin-antitoxin pair type II binding - - - 0.00000001414 59.0
BYD3_k127_5859052_2 DNA ligase K01971 - 6.5.1.1 4.032e-261 831.0
BYD3_k127_5859052_3 ATPase activity K02045 - 3.6.3.25 9.322e-194 623.0
BYD3_k127_5859052_4 COG1613 ABC-type sulfate transport system, periplasmic component K02048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 493.0
BYD3_k127_5859052_5 TIGRFAM sulfate ABC transporter, permease protein CysW, sulfate ABC transporter, permease protein K02047 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 381.0
BYD3_k127_5859052_6 Binding-protein-dependent transport system inner membrane component K02046 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 356.0
BYD3_k127_5859052_7 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006562 333.0
BYD3_k127_5859052_8 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 302.0
BYD3_k127_5859052_9 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000001175 223.0
BYD3_k127_5905681_0 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000001868 265.0
BYD3_k127_5905681_1 Belongs to the aldehyde dehydrogenase family K00128,K00130,K10217 - 1.2.1.3,1.2.1.32,1.2.1.8,1.2.1.85 0.0000000000000000000000000001148 117.0
BYD3_k127_5905681_2 Protein of unknown function (DUF2442) - - - 0.0000000000000000009543 91.0
BYD3_k127_5905681_5 Zn peptidase - - - 0.00006941 51.0
BYD3_k127_5905681_6 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0001932 53.0
BYD3_k127_5923492_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 539.0
BYD3_k127_5923492_1 Glyceraldehyde-3-phosphate dehydrogenase K00150 - 1.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 457.0
BYD3_k127_5923492_10 KR domain K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000007621 270.0
BYD3_k127_5923492_11 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000754 236.0
BYD3_k127_5923492_12 Mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000000012 136.0
BYD3_k127_5923492_13 Lytic transglycosylase catalytic - - - 0.000000000000000000000000000000000668 151.0
BYD3_k127_5923492_14 COG2893 Phosphotransferase system, mannose fructose-specific component IIA K02793 - 2.7.1.191 0.00000000000000000000000000000004322 129.0
BYD3_k127_5923492_15 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000000001559 113.0
BYD3_k127_5923492_16 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000006354 105.0
BYD3_k127_5923492_17 Ribosomal L32p protein family K02911 - - 0.000000000000000000000388 105.0
BYD3_k127_5923492_18 heat shock protein binding K05516,K05801 - - 0.0000000000000000000416 105.0
BYD3_k127_5923492_19 Regulatory protein - - - 0.0000000000000000002097 100.0
BYD3_k127_5923492_2 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 407.0
BYD3_k127_5923492_20 phosphocarrier protein hpr K08485,K11189 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006808,GO:0006810,GO:0008150,GO:0008152,GO:0008643,GO:0009401,GO:0009987,GO:0010033,GO:0010243,GO:0016310,GO:0016740,GO:0016772,GO:0019538,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0065007,GO:0071702,GO:0071704,GO:1901564,GO:1901698 - 0.000000000000000001436 100.0
BYD3_k127_5923492_21 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03087 GO:0000988,GO:0000990,GO:0001666,GO:0002791,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009410,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010628,GO:0016020,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019899,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032879,GO:0032880,GO:0036293,GO:0040007,GO:0042221,GO:0043175,GO:0043254,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051173,GO:0051223,GO:0051252,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0070063,GO:0070201,GO:0070482,GO:0071944,GO:0080090,GO:0090087,GO:0140110,GO:1902680,GO:1903506,GO:1903508,GO:1903530,GO:2000112,GO:2000142,GO:2001141 - 0.000000000003508 74.0
BYD3_k127_5923492_22 peptidyl-tyrosine sulfation - - - 0.000001748 60.0
BYD3_k127_5923492_3 membrane organization K07277,K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 406.0
BYD3_k127_5923492_4 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 388.0
BYD3_k127_5923492_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 377.0
BYD3_k127_5923492_6 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 329.0
BYD3_k127_5923492_7 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 318.0
BYD3_k127_5923492_8 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007765 287.0
BYD3_k127_5923492_9 Electron transfer flavoprotein FAD-binding domain K03522 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005943 285.0
BYD3_k127_5941029_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008329 640.0
BYD3_k127_5941029_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 449.0
BYD3_k127_5941029_10 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000001503 126.0
BYD3_k127_5941029_11 Binds the 23S rRNA K02909 - - 0.0000000000000000000000006452 112.0
BYD3_k127_5941029_12 Hfq protein K03666 - - 0.00000000476 69.0
BYD3_k127_5941029_13 cytochrome c biogenesis protein K06196 - - 0.0000000118 67.0
BYD3_k127_5941029_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005918 345.0
BYD3_k127_5941029_3 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004418 342.0
BYD3_k127_5941029_4 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000005286 268.0
BYD3_k127_5941029_5 phosphate acetyltransferase K00625,K13788 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000001156 247.0
BYD3_k127_5941029_6 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000006991 239.0
BYD3_k127_5941029_7 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000008633 222.0
BYD3_k127_5941029_8 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000007934 205.0
BYD3_k127_5941029_9 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000008832 203.0
BYD3_k127_6030231_0 cellulase activity - - - 0.000000000000000000000000000008095 136.0
BYD3_k127_6030231_1 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.00000000000000000000000000003418 134.0
BYD3_k127_6052326_0 Pkd domain containing protein K12567 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000983 358.0
BYD3_k127_6052326_1 Invasin, domain 3 K13735 - - 0.000000943 63.0
BYD3_k127_6052326_2 Integrin alpha (beta-propellor repeats). - - - 0.0000767 57.0
BYD3_k127_6055438_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007151 415.0
BYD3_k127_6055438_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 384.0
BYD3_k127_6055438_10 PFAM PEGA domain - - - 0.0000003776 62.0
BYD3_k127_6055438_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003197 290.0
BYD3_k127_6055438_3 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000001285 252.0
BYD3_k127_6055438_4 Metallo-beta-lactamase superfamily K02238 - - 0.0000000000000000000000000000000000000000000000000000000000003346 242.0
BYD3_k127_6055438_5 Peptidase family M50 - - - 0.000000000000000000000000000000000000000006344 169.0
BYD3_k127_6055438_6 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000002756 157.0
BYD3_k127_6055438_7 bacterial (prokaryotic) histone like domain K03530 - - 0.00000000000000000000000000001505 120.0
BYD3_k127_6055438_8 PFAM Protein-tyrosine phosphatase, low molecular weight K01104 GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009405,GO:0009605,GO:0009607,GO:0009987,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0035335,GO:0035821,GO:0036211,GO:0042578,GO:0043170,GO:0043207,GO:0043412,GO:0044003,GO:0044046,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052046,GO:0052047,GO:0052048,GO:0052083,GO:0052155,GO:0052173,GO:0052200,GO:0052212,GO:0052255,GO:0052278,GO:0052294,GO:0052552,GO:0052553,GO:0052561,GO:0052562,GO:0052564,GO:0052572,GO:0071704,GO:0071944,GO:0075136,GO:0140096,GO:1901564 3.1.3.48 0.0000000000000000006058 101.0
BYD3_k127_6055438_9 ribonuclease BN K07058 - - 0.000000007745 66.0
BYD3_k127_6056025_0 NADH-quinone oxidoreductase chain L K00341,K05577 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 500.0
BYD3_k127_6056025_1 Proton-conducting membrane transporter K00342,K05575 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 401.0
BYD3_k127_6056025_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00332 - 1.6.5.3 0.0000000000000000000001516 103.0
BYD3_k127_6056025_11 4Fe-4S dicluster domain K00338,K02573,K03941 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3,1.6.99.3 0.0000000000000000002525 102.0
BYD3_k127_6056025_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000006944 91.0
BYD3_k127_6056025_13 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000002974 80.0
BYD3_k127_6056025_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000002096 81.0
BYD3_k127_6056025_15 4 iron, 4 sulfur cluster binding K00176,K05524 - 1.2.7.3 0.0000000000162 69.0
BYD3_k127_6056025_16 Belongs to the complex I subunit 6 family K00339,K05578 - 1.6.5.3 0.000004288 58.0
BYD3_k127_6056025_2 NAD binding K00333,K05579,K13378 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003377 401.0
BYD3_k127_6056025_3 6 heme-binding sites - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 373.0
BYD3_k127_6056025_4 Cytochrome C assembly protein K02198 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 388.0
BYD3_k127_6056025_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343,K05573 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003077 325.0
BYD3_k127_6056025_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337,K05572 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0045333,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 307.0
BYD3_k127_6056025_7 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000682 299.0
BYD3_k127_6056025_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000002855 236.0
BYD3_k127_6056025_9 amine dehydrogenase activity - - - 0.0000000000000000000000434 113.0
BYD3_k127_6106067_0 Belongs to the ClpA ClpB family K03696 - - 2.791e-297 933.0
BYD3_k127_6106067_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.309e-233 745.0
BYD3_k127_6106067_10 PFAM oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007913 280.0
BYD3_k127_6106067_11 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000003519 240.0
BYD3_k127_6106067_12 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000004691 261.0
BYD3_k127_6106067_13 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000002383 252.0
BYD3_k127_6106067_14 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000003172 250.0
BYD3_k127_6106067_15 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000005831 231.0
BYD3_k127_6106067_16 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000378 236.0
BYD3_k127_6106067_17 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000004643 237.0
BYD3_k127_6106067_18 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000002673 186.0
BYD3_k127_6106067_19 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000002845 181.0
BYD3_k127_6106067_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.23e-208 683.0
BYD3_k127_6106067_20 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000003528 165.0
BYD3_k127_6106067_21 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000377 173.0
BYD3_k127_6106067_22 Beta-lactamase - - - 0.000000000000000000000000000000000000000006685 169.0
BYD3_k127_6106067_23 positive regulation of growth rate - - - 0.000000000000000000000000000000000004282 151.0
BYD3_k127_6106067_24 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000000000000002711 134.0
BYD3_k127_6106067_25 Methyltransferase K08316 - 2.1.1.171 0.00000000000000000000000000000008471 134.0
BYD3_k127_6106067_26 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000005418 128.0
BYD3_k127_6106067_27 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000004498 115.0
BYD3_k127_6106067_28 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000003482 112.0
BYD3_k127_6106067_29 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000156 106.0
BYD3_k127_6106067_3 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 451.0
BYD3_k127_6106067_30 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.000000000000006703 87.0
BYD3_k127_6106067_31 IMG reference gene - - - 0.0000000000007574 83.0
BYD3_k127_6106067_32 protein conserved in bacteria K09764 - - 0.0000000000318 67.0
BYD3_k127_6106067_33 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 0.0000000000354 75.0
BYD3_k127_6106067_34 oxidoreductase activity - - - 0.000000002888 70.0
BYD3_k127_6106067_35 Tetratricopeptide repeat - - - 0.00000001616 67.0
BYD3_k127_6106067_36 COG2825 Outer membrane protein - - - 0.00000001838 65.0
BYD3_k127_6106067_37 TonB dependent receptor - - - 0.00002325 57.0
BYD3_k127_6106067_38 peptidyl-tyrosine sulfation - - - 0.00002759 58.0
BYD3_k127_6106067_39 von Willebrand factor, type A K07114 - - 0.0001546 54.0
BYD3_k127_6106067_4 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 451.0
BYD3_k127_6106067_5 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 407.0
BYD3_k127_6106067_6 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 327.0
BYD3_k127_6106067_7 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007379 297.0
BYD3_k127_6106067_8 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001018 283.0
BYD3_k127_6106067_9 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001655 288.0
BYD3_k127_6128628_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000003466 189.0
BYD3_k127_6128628_1 N-terminal domain of unknown function (DUF4140) - - - 0.0000000000000000000614 96.0
BYD3_k127_6173417_0 Dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 414.0
BYD3_k127_6173417_1 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000002667 256.0
BYD3_k127_6173417_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000001163 181.0
BYD3_k127_6173417_3 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000001187 149.0
BYD3_k127_6173417_4 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000001554 95.0
BYD3_k127_6173417_5 PFAM VanZ like - - - 0.0000000000005988 76.0
BYD3_k127_6173417_6 - - - - 0.0000004597 58.0
BYD3_k127_6175543_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 2.051e-302 955.0
BYD3_k127_6175543_1 Superfamily II DNA RNA helicases, SNF2 family - - - 3.237e-284 934.0
BYD3_k127_6175543_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13924 - 2.1.1.80,3.1.1.61 1.495e-245 803.0
BYD3_k127_6175543_3 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 409.0
BYD3_k127_6175543_4 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009253 261.0
BYD3_k127_6175543_5 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000007477 238.0
BYD3_k127_6175543_6 Histidine kinase - - - 0.0000000000000000000000000002684 116.0
BYD3_k127_6175543_7 Outer membrane receptor - - - 0.0000000000000000000000000659 126.0
BYD3_k127_6175543_8 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000001552 118.0
BYD3_k127_6188275_0 NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 560.0
BYD3_k127_6188275_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 518.0
BYD3_k127_6188275_10 DoxX-like family - - - 0.000000000000000000000000000000000000002052 151.0
BYD3_k127_6188275_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000004675 143.0
BYD3_k127_6188275_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.6.5.3 0.0000000000000000000000000009376 116.0
BYD3_k127_6188275_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000151 111.0
BYD3_k127_6188275_14 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000007615 116.0
BYD3_k127_6188275_15 SNARE associated Golgi protein - - - 0.000000004052 59.0
BYD3_k127_6188275_16 Tetratricopeptide repeat - - - 0.000467 52.0
BYD3_k127_6188275_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005999 495.0
BYD3_k127_6188275_3 formate dehydrogenase (NAD+) activity K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 393.0
BYD3_k127_6188275_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 400.0
BYD3_k127_6188275_5 quinone binding K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 363.0
BYD3_k127_6188275_6 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002297 275.0
BYD3_k127_6188275_7 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003878 229.0
BYD3_k127_6188275_8 SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000007673 222.0
BYD3_k127_6188275_9 2 iron, 2 sulfur cluster binding K00334,K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000009147 176.0
BYD3_k127_6197341_0 acyl-coa dehydrogenase K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 479.0
BYD3_k127_6197341_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 441.0
BYD3_k127_6197341_2 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 398.0
BYD3_k127_6197341_3 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 378.0
BYD3_k127_6197341_4 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.000000000000000000000000006233 130.0
BYD3_k127_6197341_5 TIGRFAM Diguanylate cyclase K18967 - 2.7.7.65 0.0000000000000000000332 103.0
BYD3_k127_6221733_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1239.0
BYD3_k127_6221733_1 citrate (Si)-synthase activity K01647 GO:0003674,GO:0003824,GO:0004108,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0006082,GO:0006084,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0014823,GO:0015980,GO:0016740,GO:0016746,GO:0016999,GO:0017144,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0036440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046483,GO:0046912,GO:0050896,GO:0051186,GO:0055086,GO:0055114,GO:0070013,GO:0071704,GO:0072350,GO:0072521,GO:1901135,GO:1901360,GO:1901564 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 470.0
BYD3_k127_6221733_10 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000004393 134.0
BYD3_k127_6221733_11 Transcription factor K19687 - - 0.000000000000000000001656 105.0
BYD3_k127_6221733_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 454.0
BYD3_k127_6221733_3 Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 408.0
BYD3_k127_6221733_4 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 316.0
BYD3_k127_6221733_5 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007424 326.0
BYD3_k127_6221733_6 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002288 295.0
BYD3_k127_6221733_7 Deoxynucleoside kinase K15518 - 2.7.1.113 0.000000000000000000000000000000000000000000000000000000000007702 212.0
BYD3_k127_6221733_8 Toxic component of a toxin-antitoxin (TA) module. An RNase K19686 - - 0.0000000000000000000000000000000000000000000000000000003825 195.0
BYD3_k127_6221733_9 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000002026 159.0
BYD3_k127_6255500_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 2.058e-287 900.0
BYD3_k127_6255500_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 602.0
BYD3_k127_6255500_10 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000003132 107.0
BYD3_k127_6255500_11 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000004184 108.0
BYD3_k127_6255500_12 serine threonine protein kinase - - - 0.00002525 55.0
BYD3_k127_6255500_2 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 426.0
BYD3_k127_6255500_3 7TM-HD extracellular K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 365.0
BYD3_k127_6255500_4 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 349.0
BYD3_k127_6255500_5 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000000000000000000000000000000000000001591 265.0
BYD3_k127_6255500_6 PFAM CBS domain containing protein K06189 - - 0.0000000000000000000000000000000000000000000000000000000002519 223.0
BYD3_k127_6255500_7 domain, Protein - - - 0.000000000000000000000000000000000000000000000006645 199.0
BYD3_k127_6255500_8 AAA domain - - - 0.00000000000000000000000000001844 138.0
BYD3_k127_6255500_9 Helix-turn-helix XRE-family like proteins K21498 - - 0.0000000000000000000000003989 106.0
BYD3_k127_6294857_0 4Fe-4S dicluster domain K00184 - - 6.27e-304 968.0
BYD3_k127_6294857_1 Cytochrome c7 and related cytochrome c K19405,K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 2.7.14.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005972 289.0
BYD3_k127_6294857_2 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000000008808 199.0
BYD3_k127_6294857_3 Cytochrome c - - - 0.00000000000000000000000000000000000001045 168.0
BYD3_k127_6341832_0 Protein of unknown function (DUF2975) - - - 0.00000000000000000000000000000000000002515 149.0
BYD3_k127_6341832_1 Cro/C1-type HTH DNA-binding domain - - - 0.0000000000000000000000000003684 115.0
BYD3_k127_6341832_2 - - - - 0.00000000000000000003811 98.0
BYD3_k127_6341832_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0000000002899 61.0
BYD3_k127_6363071_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 5.566e-309 960.0
BYD3_k127_6363071_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000006874 220.0
BYD3_k127_6363071_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000008225 218.0
BYD3_k127_6363071_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000605 80.0
BYD3_k127_6363071_4 - - - - 0.0000000000000004143 83.0
BYD3_k127_6363071_5 - - - - 0.00000000003233 65.0
BYD3_k127_6363071_6 multi-organism process K03195 - - 0.00000000005091 72.0
BYD3_k127_6368401_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004506 298.0
BYD3_k127_6368401_1 cheY-homologous receiver domain K02485 - - 0.0000000000000000000000000000000000000000000000000000000000006544 213.0
BYD3_k127_6368401_2 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000084 226.0
BYD3_k127_6368401_3 Predicted membrane protein (DUF2157) - - - 0.00000000000000000000000000000000000000000000000000000001687 214.0
BYD3_k127_6368401_4 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000000009139 128.0
BYD3_k127_6370859_0 protein import - - - 0.0000001419 63.0
BYD3_k127_6383964_0 Ser Thr phosphatase family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009883 450.0
BYD3_k127_6383964_1 chitinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007112 293.0
BYD3_k127_6383964_2 CotH kinase protein - - - 0.000000000000000000000001136 123.0
BYD3_k127_6383964_3 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K01179 - 3.2.1.4 0.000000000008529 81.0
BYD3_k127_6383964_4 Belongs to the 'phage' integrase family - - - 0.00000003467 60.0
BYD3_k127_6383964_5 - - - - 0.000002183 55.0
BYD3_k127_6383964_6 energy transducer activity K03832 - - 0.000003911 50.0
BYD3_k127_6383964_7 protein secretion - - - 0.00001022 61.0
BYD3_k127_6393833_0 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 492.0
BYD3_k127_6393833_1 Membrane protein involved in the export of O-antigen and teichoic acid K03328 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009886 441.0
BYD3_k127_6393833_10 Protein involved in cellulose biosynthesis - - - 0.00000000000000000000000000000000000000000000008624 192.0
BYD3_k127_6393833_11 Histidine kinase K02668,K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000001367 180.0
BYD3_k127_6393833_12 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000002034 169.0
BYD3_k127_6393833_13 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000002598 174.0
BYD3_k127_6393833_14 Macrocin-O-methyltransferase (TylF) - - - 0.000000000000000000000000000000000002178 147.0
BYD3_k127_6393833_15 Signal peptidase (SPase) II - - - 0.00000000000000000000000000000005088 143.0
BYD3_k127_6393833_16 Glycosyltransferase Family 4 K19424 - - 0.0000000000000000000000000000002781 137.0
BYD3_k127_6393833_17 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843,K02849 - - 0.0000000000000000000000000000276 136.0
BYD3_k127_6393833_18 PFAM Fibronectin, type III domain K01179,K06882 - 3.2.1.4 0.00000000000000002737 97.0
BYD3_k127_6393833_19 PFAM formyl transferase domain protein - - - 0.0000000000001026 84.0
BYD3_k127_6393833_2 Flavin containing amine oxidoreductase K00231,K01854 - 1.3.3.15,1.3.3.4,5.4.99.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 346.0
BYD3_k127_6393833_20 methyltransferase - - - 0.000004728 58.0
BYD3_k127_6393833_21 COG4970 Tfp pilus assembly protein FimT K08084,K08085 - - 0.0003084 50.0
BYD3_k127_6393833_3 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 307.0
BYD3_k127_6393833_4 phospho-N-acetylmuramoyl-pentapeptide-transferase activity K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 311.0
BYD3_k127_6393833_5 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000003243 222.0
BYD3_k127_6393833_6 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000008769 210.0
BYD3_k127_6393833_7 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000003854 198.0
BYD3_k127_6393833_8 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000004166 198.0
BYD3_k127_6393833_9 Glycosyltransferase like family 2 K07011 - - 0.0000000000000000000000000000000000000000000000004832 188.0
BYD3_k127_6501713_0 Domain of unknown function (DUF4143) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005002 500.0
BYD3_k127_6501713_1 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000604 286.0
BYD3_k127_6501713_2 beta-lactamase - - - 0.00000000000000000000000000000000000000000001028 182.0
BYD3_k127_6501713_3 Transglutaminase-like superfamily - - - 0.00000000000000000000000000177 130.0
BYD3_k127_6501713_4 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000003101 127.0
BYD3_k127_6501713_5 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0000000000001125 70.0
BYD3_k127_6501713_6 Protein of unknown function (DUF2569) - - - 0.000000000001044 82.0
BYD3_k127_65063_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 366.0
BYD3_k127_65063_1 Cna B domain protein - - - 0.000003726 60.0
BYD3_k127_6524651_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0 1163.0
BYD3_k127_6524651_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1035.0
BYD3_k127_6524651_10 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 341.0
BYD3_k127_6524651_11 LacI family K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000597 316.0
BYD3_k127_6524651_12 RsbT co-antagonist protein rsbRD N-terminal domain K17763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 308.0
BYD3_k127_6524651_13 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000149 233.0
BYD3_k127_6524651_14 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000005991 216.0
BYD3_k127_6524651_15 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000001551 214.0
BYD3_k127_6524651_16 cytochrome c nitrite reductase K15876 - - 0.0000000000000000000000000000000000000000000000006549 188.0
BYD3_k127_6524651_17 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K17752 - 2.7.11.1 0.00000000000000000000000000000000000000000000001328 177.0
BYD3_k127_6524651_18 PFAM Sulfate transporter antisigma-factor antagonist STAS K17762 - - 0.0000000000000000000000000000000000000000000006196 169.0
BYD3_k127_6524651_19 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000001745 170.0
BYD3_k127_6524651_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 5.318e-293 920.0
BYD3_k127_6524651_20 Nad-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000003819 167.0
BYD3_k127_6524651_21 Esterase PHB depolymerase - - - 0.000000000000000000000000000000000000000002322 166.0
BYD3_k127_6524651_22 Transport permease protein K01992 - - 0.000000000000000000000000000000000000007551 162.0
BYD3_k127_6524651_23 acetolactate decarboxylase activity K01575 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0047605 4.1.1.5 0.00000000000000000000000000000000002006 144.0
BYD3_k127_6524651_24 Putative restriction endonuclease - - - 0.000000000000000000000000000000001529 151.0
BYD3_k127_6524651_25 sigma factor antagonist activity K04757 - 2.7.11.1 0.0000000000000000000000000001575 124.0
BYD3_k127_6524651_26 - - - - 0.000000000000000000000003506 115.0
BYD3_k127_6524651_27 COG4677 Pectin methylesterase K01051 - 3.1.1.11 0.00003596 56.0
BYD3_k127_6524651_28 - - - - 0.0001671 49.0
BYD3_k127_6524651_3 Alpha amylase, catalytic domain K06044 - 5.4.99.15 6.008e-244 784.0
BYD3_k127_6524651_4 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 6.832e-209 668.0
BYD3_k127_6524651_5 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 571.0
BYD3_k127_6524651_6 PFAM glycoside hydrolase family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 561.0
BYD3_k127_6524651_7 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 399.0
BYD3_k127_6524651_8 Voltage gated chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000865 382.0
BYD3_k127_6524651_9 Spermine/spermidine synthase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 384.0
BYD3_k127_6547675_0 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 315.0
BYD3_k127_6547675_1 - - - - 0.000002053 59.0
BYD3_k127_655936_0 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 455.0
BYD3_k127_655936_1 Thiazole biosynthesis protein ThiG K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0040007,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 326.0
BYD3_k127_655936_2 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001896 286.0
BYD3_k127_655936_3 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000002115 257.0
BYD3_k127_655936_4 Tetratricopeptide repeat protein - - - 0.0000000000000000000000000007458 127.0
BYD3_k127_655936_5 positive regulation of proteasomal protein catabolic process - - - 0.00000000000000000000002548 115.0
BYD3_k127_655936_6 thiamine-phosphate diphosphorylase activity K00788 - 2.5.1.3 0.000000000000000001148 100.0
BYD3_k127_655936_7 repeat-containing protein - - - 0.00000000000002125 85.0
BYD3_k127_655936_8 thiamine diphosphate biosynthetic process K03154 - - 0.00000018 63.0
BYD3_k127_655936_9 Domain of unknown function (DUF1736) - - - 0.0007475 51.0
BYD3_k127_6561177_0 Amidase K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 527.0
BYD3_k127_6561177_1 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000000000224 78.0
BYD3_k127_6561177_2 proline dipeptidase activity K01262 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0016787,GO:0019538,GO:0030145,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.11.9 0.0006135 52.0
BYD3_k127_6587852_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007252 458.0
BYD3_k127_6587852_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 412.0
BYD3_k127_6587852_10 thiolester hydrolase activity K06889 - - 0.00000000000000007989 91.0
BYD3_k127_6587852_11 Tetratricopeptide repeat - - - 0.0000000000003399 83.0
BYD3_k127_6587852_12 Tetratricopeptide repeat - - - 0.0000000002188 75.0
BYD3_k127_6587852_13 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000007384 64.0
BYD3_k127_6587852_14 Tetratricopeptide TPR_2 repeat protein - - - 0.000004739 59.0
BYD3_k127_6587852_15 - - - - 0.00001581 58.0
BYD3_k127_6587852_17 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0005494 53.0
BYD3_k127_6587852_2 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 327.0
BYD3_k127_6587852_3 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000002986 214.0
BYD3_k127_6587852_4 Peptidase family C25 - - - 0.0000000000000000000000000000000000000000000000000000002635 224.0
BYD3_k127_6587852_5 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000004656 181.0
BYD3_k127_6587852_6 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000002524 149.0
BYD3_k127_6587852_7 Sigma-70, region 4 K03088 - - 0.00000000000000000000000007537 115.0
BYD3_k127_6587852_8 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000002103 96.0
BYD3_k127_6587852_9 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000002626 96.0
BYD3_k127_660168_0 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001598 286.0
BYD3_k127_660168_1 Serine threonine protein kinase K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000002215 270.0
BYD3_k127_660168_2 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000005073 145.0
BYD3_k127_660168_3 ECF sigma factor K03088 - - 0.000000000000000003975 98.0
BYD3_k127_660168_4 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000002271 83.0
BYD3_k127_660168_5 Trypsin-like serine protease - - - 0.0000000002721 69.0
BYD3_k127_66026_0 response to heat K03694,K03695 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.0 1053.0
BYD3_k127_66026_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 567.0
BYD3_k127_66026_10 Protein of unknown function (DUF1428) - - - 0.0000000000000000000000000000000000000004234 171.0
BYD3_k127_66026_11 isomerase B K01808 - 5.3.1.6 0.000000000000000000000000000000000000001545 166.0
BYD3_k127_66026_12 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000000000004959 166.0
BYD3_k127_66026_13 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000001384 152.0
BYD3_k127_66026_14 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000179 106.0
BYD3_k127_66026_15 Hydrolase - - - 0.0000000000000000002943 98.0
BYD3_k127_66026_16 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17105 - 2.5.1.42 0.00000000000000008942 93.0
BYD3_k127_66026_17 Transcriptional K07979 - - 0.000000000001182 70.0
BYD3_k127_66026_18 Phosphoserine phosphatase - - - 0.000000001071 72.0
BYD3_k127_66026_2 HELICc2 K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 522.0
BYD3_k127_66026_3 metallopeptidase activity K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 383.0
BYD3_k127_66026_4 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006719 342.0
BYD3_k127_66026_5 Polysaccharide biosynthesis protein K15891 - 1.1.1.354 0.000000000000000000000000000000000000000000000000000000000000000000000000001251 266.0
BYD3_k127_66026_6 metallopeptidase activity K03592 - - 0.0000000000000000000000000000000000000000000000000000002069 222.0
BYD3_k127_66026_7 Belongs to the dGTPase family. Type 2 subfamily K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.0000000000000000000000000000000000000000000000001839 193.0
BYD3_k127_66026_8 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.00000000000000000000000000000000000000000001813 166.0
BYD3_k127_66026_9 PFAM Integral membrane protein DUF92 - GO:0005575,GO:0016020 - 0.0000000000000000000000000000000000000002689 172.0
BYD3_k127_6637029_0 Fumarase C C-terminus - - - 2.386e-227 713.0
BYD3_k127_6637029_1 cellulase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 353.0
BYD3_k127_6637029_2 extracellular matrix structural constituent - - - 0.0000000000000000000000000000001447 140.0
BYD3_k127_6637029_3 Response regulator receiver - - - 0.0000000000000397 81.0
BYD3_k127_6684593_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.0000000000000000000000000000000000000000000001538 179.0
BYD3_k127_6684593_1 outer membrane efflux protein - - - 0.0000000000000000144 87.0
BYD3_k127_6684593_2 Yip1 domain - - - 0.00000000003894 75.0
BYD3_k127_6686537_0 Mandelate Racemase Muconate Lactonizing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004787 384.0
BYD3_k127_6686537_1 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007887 342.0
BYD3_k127_6686537_2 DJ-1/PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 319.0
BYD3_k127_6686537_3 PA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001517 276.0
BYD3_k127_6686537_4 Glutathione S-transferase, C-terminal domain K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002744 243.0
BYD3_k127_6686537_5 Tricorn protease homolog K08676 - - 0.00000000000000000000000000000000000000000000000000000000000000000003763 236.0
BYD3_k127_6686537_7 COG3794 Plastocyanin - - - 0.00000001322 68.0
BYD3_k127_6686537_8 - - - - 0.00002513 56.0
BYD3_k127_6697981_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003696 292.0
BYD3_k127_6697981_1 Fibronectin type 3 domain - - - 0.0000000000000000000000000000000000000000000011 191.0
BYD3_k127_671211_0 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 558.0
BYD3_k127_671211_1 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 372.0
BYD3_k127_671211_10 domain, Protein - - - 0.0000000000000000004056 99.0
BYD3_k127_671211_11 Protein of unknown function DUF86 K06949 - 3.1.3.100 0.000000000000000008536 91.0
BYD3_k127_671211_12 esterase - - - 0.000000001354 68.0
BYD3_k127_671211_13 Sigma-70 region 2 K03088 - - 0.00000000435 64.0
BYD3_k127_671211_14 Protein of unknown function DUF86 - - - 0.0000001772 54.0
BYD3_k127_671211_15 Protein of unknown function DUF86 K06949 - 3.1.3.100 0.0001689 46.0
BYD3_k127_671211_2 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000002177 232.0
BYD3_k127_671211_3 esterase - - - 0.00000000000000000000000000000000000000000000000000000006166 207.0
BYD3_k127_671211_4 LPXTG-motif cell wall anchor domain - - - 0.0000000000000000000000000000000000000000000000000001017 194.0
BYD3_k127_671211_5 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000000000000003401 213.0
BYD3_k127_671211_6 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.0000000000000000000000000000000000000000000000000005191 188.0
BYD3_k127_671211_7 Putative metal-binding motif - - - 0.0000000000000000000001397 115.0
BYD3_k127_671211_9 esterase - - - 0.0000000000000000000331 94.0
BYD3_k127_6763989_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 5.897e-222 717.0
BYD3_k127_6763989_1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01585 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 609.0
BYD3_k127_6763989_10 Fibronectin type 3 domain - - - 0.0002314 53.0
BYD3_k127_6763989_2 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000181 257.0
BYD3_k127_6763989_3 arylsulfatase activity K01133 - 3.1.6.6 0.000000000000000000000000000000000000000000000000000000000000000000003085 252.0
BYD3_k127_6763989_4 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000002653 236.0
BYD3_k127_6763989_5 dTDP-4-dehydrorhamnose 3,5-epimerase activity K01790 - 5.1.3.13 0.00000000000000000000000000000000000000007624 158.0
BYD3_k127_6763989_6 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000003767 160.0
BYD3_k127_6763989_7 tRNA (adenine(22)-N(1))-methyltransferase K06967 - 2.1.1.217 0.0000000000000000000000000000000024 138.0
BYD3_k127_6763989_8 Carboxylesterase family - - - 0.00000000000000000001993 94.0
BYD3_k127_6763989_9 Endonuclease I - - - 0.0000000008346 72.0
BYD3_k127_680598_0 Peptidase family M49 - - - 2.212e-207 660.0
BYD3_k127_680598_1 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 420.0
BYD3_k127_680598_11 Acid phosphatase homologues K19302 - 3.6.1.27 0.00001169 57.0
BYD3_k127_680598_2 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 GO:0003674,GO:0003824,GO:0004551,GO:0004721,GO:0006139,GO:0006464,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008138,GO:0008150,GO:0008152,GO:0008796,GO:0008803,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015949,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0019538,GO:0034641,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0140096,GO:1901360,GO:1901564 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008939 295.0
BYD3_k127_680598_3 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009357 317.0
BYD3_k127_680598_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002014 280.0
BYD3_k127_680598_5 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K01838 - 5.4.2.6 0.00000000000000000000000000000000000000000000000000001159 205.0
BYD3_k127_680598_6 Bacterial PH domain K08981 - - 0.0000000000000000000000000000000000000000000000003322 194.0
BYD3_k127_680598_7 RES - - - 0.000000000000000000000000005309 124.0
BYD3_k127_680598_8 Bacterial PH domain K09167 - - 0.00000000000000000000598 106.0
BYD3_k127_680598_9 COG1520 FOG WD40-like repeat - - - 0.00000000000000003797 88.0
BYD3_k127_6853271_0 PFAM periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000414 188.0
BYD3_k127_6853271_1 Peptidase U62 modulator of DNA gyrase K03568 - - 0.000000000000000000000000000001045 142.0
BYD3_k127_6853271_2 phosphorelay signal transduction system - - - 0.000000000000000000376 101.0
BYD3_k127_687938_0 cellulose binding - - - 2.613e-226 705.0
BYD3_k127_687938_1 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 437.0
BYD3_k127_687938_2 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 436.0
BYD3_k127_687938_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002312 299.0
BYD3_k127_687938_4 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000004884 145.0
BYD3_k127_687938_5 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.0000000000000000000000000000007876 122.0
BYD3_k127_6884823_0 Protein kinase domain K12132 - 2.7.11.1 1.741e-211 692.0
BYD3_k127_6884823_1 Protein of unknown function (DUF1254) - - - 7.614e-199 630.0
BYD3_k127_6884823_10 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 406.0
BYD3_k127_6884823_11 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 404.0
BYD3_k127_6884823_12 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000023 248.0
BYD3_k127_6884823_13 HIT domain K02503 - - 0.000000000000000000000000000000000000000002826 157.0
BYD3_k127_6884823_14 - - - - 0.0000000000000000000000000000000000000001636 161.0
BYD3_k127_6884823_15 Beta-lactamase - - - 0.000000000000000002612 91.0
BYD3_k127_6884823_16 alcohol dehydrogenase K13953 - 1.1.1.1 0.0000000000000007833 91.0
BYD3_k127_6884823_2 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 570.0
BYD3_k127_6884823_3 Protein of unknown function (DUF1214) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004831 558.0
BYD3_k127_6884823_4 Dehydrogenase K00004,K00008 - 1.1.1.14,1.1.1.303,1.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000639 539.0
BYD3_k127_6884823_5 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 544.0
BYD3_k127_6884823_6 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 472.0
BYD3_k127_6884823_7 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 460.0
BYD3_k127_6884823_8 Protein of unknown function (DUF1254) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008142 422.0
BYD3_k127_6884823_9 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 430.0
BYD3_k127_6914809_0 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000004025 280.0
BYD3_k127_6914809_1 PFAM peptidase T2 asparaginase 2 K13051 - 3.4.19.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000002922 269.0
BYD3_k127_6914809_10 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000002539 66.0
BYD3_k127_6914809_11 STAS domain - - - 0.00000003638 66.0
BYD3_k127_6914809_12 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000009865 61.0
BYD3_k127_6914809_13 CAAX protease self-immunity - - - 0.0002317 53.0
BYD3_k127_6914809_2 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003408 264.0
BYD3_k127_6914809_3 Small GTP-binding protein K06883 - - 0.0000000000000000000000000000000000000000000006885 188.0
BYD3_k127_6914809_4 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.000000000000000000000000000000000000000002595 172.0
BYD3_k127_6914809_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000002699 151.0
BYD3_k127_6914809_6 cheY-homologous receiver domain - - - 0.00000000000000000000000000001367 124.0
BYD3_k127_6914809_8 Histidine kinase - - - 0.00000000000000000000001134 117.0
BYD3_k127_6914809_9 sigma factor antagonist activity K04757 - 2.7.11.1 0.000000000001865 78.0
BYD3_k127_6952176_0 amine dehydrogenase activity - - - 1.175e-201 637.0
BYD3_k127_6952176_1 peptidoglycan glycosyltransferase activity K03588,K05364,K05837 GO:0002682,GO:0002684,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009605,GO:0009607,GO:0009987,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051301,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0075136 - 2.933e-199 679.0
BYD3_k127_6952176_10 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 374.0
BYD3_k127_6952176_11 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 347.0
BYD3_k127_6952176_12 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244 - 1.4.1.1,4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005684 330.0
BYD3_k127_6952176_13 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 308.0
BYD3_k127_6952176_14 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 301.0
BYD3_k127_6952176_15 Flavin containing amine oxidoreductase K06955 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000357 293.0
BYD3_k127_6952176_16 Beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004975 302.0
BYD3_k127_6952176_17 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009669 273.0
BYD3_k127_6952176_18 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000003155 238.0
BYD3_k127_6952176_19 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.0000000000000000000000000000000000000000000000000000000000000000001158 236.0
BYD3_k127_6952176_2 Transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000886 580.0
BYD3_k127_6952176_20 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000004104 263.0
BYD3_k127_6952176_21 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000000000000000000000000000000006505 210.0
BYD3_k127_6952176_22 - - - - 0.000000000000000000000000000000000000000000000000000000004699 215.0
BYD3_k127_6952176_23 Histidine kinase-like ATPase domain K01338,K04757,K06379,K08282,K17752 - 2.7.11.1,3.4.21.53 0.000000000000000000000000000000000000000000000000000000471 209.0
BYD3_k127_6952176_24 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000001271 207.0
BYD3_k127_6952176_25 Conserved Protein - - - 0.000000000000000000000000000000000000000000000000111 183.0
BYD3_k127_6952176_26 histone H2A K63-linked ubiquitination K01768,K03220,K10914 - 4.6.1.1 0.00000000000000000000000000000000000000000006721 173.0
BYD3_k127_6952176_27 Cytochrome c - - - 0.000000000000000000000000000000000000007175 154.0
BYD3_k127_6952176_28 - - - - 0.0000000000000000000000000000000000009765 145.0
BYD3_k127_6952176_29 Water Stress and Hypersensitive response - - - 0.0000000000000000000000000000000005027 137.0
BYD3_k127_6952176_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 590.0
BYD3_k127_6952176_30 Beta/gamma crystallins - - - 0.00000000000000000000000000000006241 140.0
BYD3_k127_6952176_31 histone H2A K63-linked ubiquitination K02283 - - 0.0000000000000000003618 104.0
BYD3_k127_6952176_32 Zn-dependent protease with chaperone function K07387 - - 0.000000000000000003497 101.0
BYD3_k127_6952176_33 amine dehydrogenase activity - - - 0.0000001086 55.0
BYD3_k127_6952176_34 - - - - 0.0000001149 64.0
BYD3_k127_6952176_35 Beta/Gamma crystallin - - - 0.00008034 55.0
BYD3_k127_6952176_4 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003724 498.0
BYD3_k127_6952176_5 cellulase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 524.0
BYD3_k127_6952176_6 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 478.0
BYD3_k127_6952176_7 epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 428.0
BYD3_k127_6952176_8 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005004 386.0
BYD3_k127_6952176_9 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000395 370.0
BYD3_k127_6981335_0 Putative Ig domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005847 511.0
BYD3_k127_6981335_1 Carboxyl transferase domain K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 360.0
BYD3_k127_6981335_2 Belongs to the folylpolyglutamate synthase family K11754 GO:0003674,GO:0003824,GO:0004326,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006761,GO:0006807,GO:0008150,GO:0008152,GO:0008841,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046452,GO:0046483,GO:0046900,GO:0046901,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000004254 282.0
BYD3_k127_6981335_3 PA14 domain - GO:0005575,GO:0005576 - 0.0000000000000000000000000004342 133.0
BYD3_k127_6981335_4 glycosyl transferase family 39 - - - 0.0000000000000000000000000004719 131.0
BYD3_k127_7005263_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.082e-300 950.0
BYD3_k127_7005263_1 SMART Elongator protein 3 MiaB NifB - - - 5.244e-234 732.0
BYD3_k127_7005263_10 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000000001396 187.0
BYD3_k127_7005263_11 CarD-like/TRCF domain K07736 - - 0.000000000000000000000000000000000000000005376 159.0
BYD3_k127_7005263_12 Ferritin-like domain K02217 - 1.16.3.2 0.0000000000000000000000000000000000000000541 157.0
BYD3_k127_7005263_13 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000001309 133.0
BYD3_k127_7005263_14 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000006151 130.0
BYD3_k127_7005263_15 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000007067 132.0
BYD3_k127_7005263_16 Fibronectin-binding A domain protein - - - 0.000000000000000000000000000001554 139.0
BYD3_k127_7005263_17 Hsp20/alpha crystallin family K13993 - - 0.0000000000000000006593 92.0
BYD3_k127_7005263_18 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000004787 96.0
BYD3_k127_7005263_19 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000002692 83.0
BYD3_k127_7005263_2 PFAM Type II secretion system protein E K02652 - - 4.982e-220 714.0
BYD3_k127_7005263_20 Pilus assembly protein K02662 - - 0.0000000000004141 83.0
BYD3_k127_7005263_21 - - - - 0.000000002707 69.0
BYD3_k127_7005263_22 Pilus assembly protein K02663 - - 0.0002197 54.0
BYD3_k127_7005263_3 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 482.0
BYD3_k127_7005263_4 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000366 393.0
BYD3_k127_7005263_5 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 346.0
BYD3_k127_7005263_6 Type ii and iii secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 336.0
BYD3_k127_7005263_7 PFAM Type II secretion system F domain K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001472 277.0
BYD3_k127_7005263_8 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000001167 208.0
BYD3_k127_7005263_9 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000002366 207.0
BYD3_k127_7060979_0 Ftsk_gamma K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005965 586.0
BYD3_k127_7060979_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.000000000000000000000008645 104.0
BYD3_k127_7060979_2 Tetratricopeptide repeat - - - 0.0000000000000005308 88.0
BYD3_k127_7196508_0 COG0474 Cation transport ATPase K01537 - 3.6.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009919 585.0
BYD3_k127_7196508_1 Phosphoribosyl transferase domain K07100 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009986 499.0
BYD3_k127_7196508_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000000000000000000000001281 243.0
BYD3_k127_7196508_3 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000000000000000000000000000000001666 168.0
BYD3_k127_7196508_5 Domain of unknown function (DUF4082) - - - 0.000000000009564 79.0
BYD3_k127_7196508_6 Galactose oxidase, central domain - - - 0.0000002537 65.0
BYD3_k127_7205670_0 PFAM carboxyl transferase K01615 - 4.1.1.70 6.697e-222 726.0
BYD3_k127_7205670_1 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008501 476.0
BYD3_k127_7205670_2 Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 442.0
BYD3_k127_7205670_3 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 333.0
BYD3_k127_7205670_4 PFAM glycosyl transferase family 9 K02843 - - 0.000000000000000000000000000000000000000000000000000000005119 226.0
BYD3_k127_7205670_5 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000087 164.0
BYD3_k127_7205670_6 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000003248 157.0
BYD3_k127_7235163_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 7.434e-242 761.0
BYD3_k127_7235163_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 6.342e-236 739.0
BYD3_k127_7235163_10 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000000000000000000000003345 139.0
BYD3_k127_7235163_11 - - - - 0.00000000000000000000000000000000002618 145.0
BYD3_k127_7235163_12 Heat shock protein DnaJ domain protein - - - 0.0000000000000000000007719 112.0
BYD3_k127_7235163_13 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117,K03646 - - 0.0000000000003743 73.0
BYD3_k127_7235163_14 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.000000001176 61.0
BYD3_k127_7235163_15 Trm112p-like protein K00912,K09791 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.1.130 0.000000006124 70.0
BYD3_k127_7235163_16 Tetratricopeptide repeat - - - 0.00000008886 58.0
BYD3_k127_7235163_17 Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position K11211 - 2.7.1.166 0.00000009878 64.0
BYD3_k127_7235163_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000753 370.0
BYD3_k127_7235163_3 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 361.0
BYD3_k127_7235163_4 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004802 318.0
BYD3_k127_7235163_5 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000008944 234.0
BYD3_k127_7235163_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000000000000005452 193.0
BYD3_k127_7235163_7 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.000000000000000000000000000000000000000003561 173.0
BYD3_k127_7235163_8 COG0859 ADP-heptose LPS heptosyltransferase K02841,K02849 - - 0.00000000000000000000000000000000000004177 159.0
BYD3_k127_7235163_9 C-terminal, D2-small domain, of ClpB protein K03695,K03696 - - 0.00000000000000000000000000000000000005603 162.0
BYD3_k127_7236914_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 8.982e-270 867.0
BYD3_k127_7236914_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 7.39e-265 846.0
BYD3_k127_7236914_10 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 388.0
BYD3_k127_7236914_11 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 350.0
BYD3_k127_7236914_12 amine oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 354.0
BYD3_k127_7236914_13 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004707 301.0
BYD3_k127_7236914_14 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008504 277.0
BYD3_k127_7236914_15 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001183 269.0
BYD3_k127_7236914_16 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000002175 268.0
BYD3_k127_7236914_17 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004786 268.0
BYD3_k127_7236914_18 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000005995 249.0
BYD3_k127_7236914_19 Phage integrase, N-terminal SAM-like domain K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000221 256.0
BYD3_k127_7236914_2 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007703 507.0
BYD3_k127_7236914_20 Belongs to the arginase family K01476 - 3.5.3.1 0.000000000000000000000000000000000000000000000000000004175 205.0
BYD3_k127_7236914_21 translation initiation inhibitor, yjgF family K04782 - 4.2.99.21 0.00000000000000000000000000000000000000000000000001845 182.0
BYD3_k127_7236914_22 spore germination K07790 - - 0.000000000000000000000000000000000000000000000008816 187.0
BYD3_k127_7236914_23 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000002927 184.0
BYD3_k127_7236914_24 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000058 154.0
BYD3_k127_7236914_25 Hfq protein - - - 0.00000000000000000000000000000008222 130.0
BYD3_k127_7236914_26 PFAM response regulator receiver K07657 - - 0.0000000000000000000000000001096 128.0
BYD3_k127_7236914_27 TfoX N-terminal domain - - - 0.000000000000000000000000003533 115.0
BYD3_k127_7236914_28 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000003567 99.0
BYD3_k127_7236914_29 deoxyhypusine monooxygenase activity - - - 0.00000000000000000001087 107.0
BYD3_k127_7236914_3 DegT/DnrJ/EryC1/StrS aminotransferase family K04127 - 5.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008086 473.0
BYD3_k127_7236914_30 - - - - 0.00000000000000000003887 106.0
BYD3_k127_7236914_31 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.00000000000000000006917 101.0
BYD3_k127_7236914_32 ChrR Cupin-like domain - - - 0.000000000000000001837 97.0
BYD3_k127_7236914_33 Uncharacterised protein family (UPF0158) - - - 0.000000000000002193 82.0
BYD3_k127_7236914_34 FtsX-like permease family K02004 - - 0.000000006342 57.0
BYD3_k127_7236914_35 - - - - 0.0000002191 61.0
BYD3_k127_7236914_36 transcriptional regulator, SARP family - - - 0.000000554 62.0
BYD3_k127_7236914_37 SurA N-terminal domain - - - 0.00003583 55.0
BYD3_k127_7236914_38 - - - - 0.0003645 49.0
BYD3_k127_7236914_39 energy transducer activity K03832 - - 0.0006794 49.0
BYD3_k127_7236914_4 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 484.0
BYD3_k127_7236914_5 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 486.0
BYD3_k127_7236914_6 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 426.0
BYD3_k127_7236914_7 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006187 418.0
BYD3_k127_7236914_8 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 423.0
BYD3_k127_7236914_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 388.0
BYD3_k127_7241896_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537,K01539 - 3.6.3.8,3.6.3.9 5.206e-230 741.0
BYD3_k127_7241896_1 Catalyzes two subsequent steps in gluconeogenesis the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P) K01622 - 3.1.3.11,4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009532 532.0
BYD3_k127_7241896_10 Mortierella verticillata NRRL 6337 K01536 - 3.6.3.7 0.0006633 48.0
BYD3_k127_7241896_2 phosphoribosyltransferases K07100 - - 0.0000000000000000000000000000000000000000000000000000000496 217.0
BYD3_k127_7241896_3 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000004586 192.0
BYD3_k127_7241896_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000004702 191.0
BYD3_k127_7241896_5 bacterial OsmY and nodulation domain - - - 0.000000000000000000000000000000000000000000000002056 186.0
BYD3_k127_7241896_6 Protein of unknown function (DUF1003) - - - 0.00000000000000000000000000000000000000008716 171.0
BYD3_k127_7241896_7 pyridoxamine 5'-phosphate K07005 - - 0.0000000000000000000000000000000000001952 148.0
BYD3_k127_7241896_8 ribosomal large subunit export from nucleus - - - 0.000000000000000000000000000007004 124.0
BYD3_k127_7241896_9 - - - - 0.00000000000006792 83.0
BYD3_k127_7251532_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 1.505e-215 688.0
BYD3_k127_7251532_1 Protein kinase domain K12132 - 2.7.11.1 2.062e-198 654.0
BYD3_k127_7251532_10 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000349 131.0
BYD3_k127_7251532_11 Protein conserved in bacteria - - - 0.00000000000001852 89.0
BYD3_k127_7251532_12 YceI-like domain - - - 0.00000000002333 79.0
BYD3_k127_7251532_13 PFAM Forkhead-associated protein - - - 0.000000004164 65.0
BYD3_k127_7251532_14 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0009954 54.0
BYD3_k127_7251532_2 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008406 430.0
BYD3_k127_7251532_3 Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 312.0
BYD3_k127_7251532_4 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004024 301.0
BYD3_k127_7251532_6 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000003395 225.0
BYD3_k127_7251532_7 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.0000000000000000000000000000000000000000000000000000000001303 215.0
BYD3_k127_7251532_8 membrane - - - 0.0000000000000000000000000000000000000000000000000007236 187.0
BYD3_k127_7251532_9 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000388 157.0
BYD3_k127_726_0 Thiolase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 472.0
BYD3_k127_726_1 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001978 256.0
BYD3_k127_726_2 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000004372 165.0
BYD3_k127_726_3 RNase_H superfamily K07502 - - 0.00000000000000000000000000000000000000001621 173.0
BYD3_k127_726_4 Cytochrome C biogenesis protein - - - 0.00007398 52.0
BYD3_k127_726_5 Protein of unknown function (DUF429) - - - 0.0002914 53.0
BYD3_k127_73156_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 4.578e-242 778.0
BYD3_k127_73156_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006027 540.0
BYD3_k127_73156_10 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000002057 110.0
BYD3_k127_73156_11 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000006758 93.0
BYD3_k127_73156_13 Biotin-requiring enzyme - - - 0.00000000000007671 80.0
BYD3_k127_73156_14 Beta/Gamma crystallin - - - 0.0000000001291 68.0
BYD3_k127_73156_2 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 551.0
BYD3_k127_73156_3 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 395.0
BYD3_k127_73156_4 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 372.0
BYD3_k127_73156_5 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 347.0
BYD3_k127_73156_6 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016832,GO:0019637,GO:0044237,GO:0071704,GO:1901135 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008446 312.0
BYD3_k127_73156_7 (AIR) carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001433 279.0
BYD3_k127_73156_8 Protein of unknown function (DUF423) - - - 0.000000000000000000000000000000000000001647 151.0
BYD3_k127_73156_9 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000001971 132.0
BYD3_k127_739427_0 PFAM polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006698 513.0
BYD3_k127_739427_1 Required for morphogenesis under gluconeogenic growth conditions - - - 0.0000000000000000000000000000000000000000000000000000000000000000001907 251.0
BYD3_k127_739427_2 AAA domain K08252 - 2.7.10.1 0.000000000000000000000000000000000000006265 154.0
BYD3_k127_739427_3 Helix-turn-helix domain - - - 0.0001259 48.0
BYD3_k127_7448333_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.522e-286 901.0
BYD3_k127_7448333_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005853 596.0
BYD3_k127_7448333_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000924 556.0
BYD3_k127_7448333_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 299.0
BYD3_k127_7448333_4 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001437 299.0
BYD3_k127_7448333_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000008514 226.0
BYD3_k127_7448333_6 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000007729 190.0
BYD3_k127_7448333_7 Ferrous iron transport protein B K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000005513 179.0
BYD3_k127_7448333_8 - - - - 0.0000000000000007201 79.0
BYD3_k127_74523_0 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002098 292.0
BYD3_k127_74523_1 - - - - 0.00000000000000000000000000000000001264 155.0
BYD3_k127_74523_2 - - - - 0.00000000000000000000000003261 115.0
BYD3_k127_74523_3 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000671 101.0
BYD3_k127_74523_4 High potential iron-sulfur protein - - - 0.000000000000005914 78.0
BYD3_k127_7474597_0 Peptidase family M28 - - - 3.063e-289 930.0
BYD3_k127_7474597_1 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 440.0
BYD3_k127_7474597_10 Protein of unknown function (DUF4239) - - - 0.00000000000000000000007424 100.0
BYD3_k127_7474597_11 - - - - 0.000000000004168 74.0
BYD3_k127_7474597_12 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.00000000006179 75.0
BYD3_k127_7474597_13 Beta/gamma crystallins - - - 0.000001714 59.0
BYD3_k127_7474597_14 antisigma factor binding K04749 - - 0.0001301 52.0
BYD3_k127_7474597_15 Beta/Gamma crystallin - - - 0.0003126 51.0
BYD3_k127_7474597_2 PFAM Peptidase M16 inactive domain K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 373.0
BYD3_k127_7474597_3 PFAM Glycosyl transferase family 2 K20534 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000737 266.0
BYD3_k127_7474597_4 Phospholipase D. Active site motifs. K06132 - - 0.00000000000000000000000000000000000000000000000002654 197.0
BYD3_k127_7474597_5 Sulfatase - - - 0.00000000000000000000000000000000000000000000002788 190.0
BYD3_k127_7474597_6 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000004105 173.0
BYD3_k127_7474597_7 CHRD domain - - - 0.00000000000000000000000000000000000000941 149.0
BYD3_k127_7474597_8 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000001874 156.0
BYD3_k127_7474597_9 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000001043 138.0
BYD3_k127_7481113_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 501.0
BYD3_k127_7481113_1 PFAM Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 373.0
BYD3_k127_7481113_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000004798 186.0
BYD3_k127_7481113_3 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000001119 161.0
BYD3_k127_7481113_4 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000004626 159.0
BYD3_k127_7481113_5 - - - - 0.0000000000000000000000000008664 126.0
BYD3_k127_7481113_6 Protein of unknown function, DUF255 - - - 0.00000000000001171 86.0
BYD3_k127_7481113_7 Endonuclease I - - - 0.0000002539 61.0
BYD3_k127_7481113_8 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000009062 63.0
BYD3_k127_7510809_0 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 1.963e-233 734.0
BYD3_k127_7510809_1 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 514.0
BYD3_k127_7510809_10 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000691 240.0
BYD3_k127_7510809_11 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000001584 235.0
BYD3_k127_7510809_12 Bile acid K03453 - - 0.00000000000000000000000000000000000000000000000000000000002981 216.0
BYD3_k127_7510809_13 Domain of unknown function (DUF202) K00389 - - 0.0000000000000000000000000000000000000000000000000003059 190.0
BYD3_k127_7510809_14 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000461 187.0
BYD3_k127_7510809_15 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000006816 196.0
BYD3_k127_7510809_16 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000004199 171.0
BYD3_k127_7510809_17 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000002904 160.0
BYD3_k127_7510809_18 Protein conserved in bacteria - - - 0.00000000000000000000000000000001006 149.0
BYD3_k127_7510809_19 Protein of unknown function (DUF1622) - - - 0.0000000000000000000000000000000154 141.0
BYD3_k127_7510809_2 Belongs to the DegT DnrJ EryC1 family K02805 - 2.6.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 508.0
BYD3_k127_7510809_20 Protein of unknown function (DUF1318) K09978 - - 0.00000000000000000000000000000003121 134.0
BYD3_k127_7510809_21 Cysteine-rich secretory protein family - - - 0.0000000000000000000000002178 117.0
BYD3_k127_7510809_22 - - - - 0.0000000000000000009543 91.0
BYD3_k127_7510809_23 glycosyl transferase family 2 - - - 0.000000000000000002647 100.0
BYD3_k127_7510809_24 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000007912 79.0
BYD3_k127_7510809_3 ABC1 family K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 491.0
BYD3_k127_7510809_4 C-methyltransferase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005771 421.0
BYD3_k127_7510809_5 Polysaccharide biosynthesis protein K01709 - 4.2.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 357.0
BYD3_k127_7510809_6 cephalosporin hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 331.0
BYD3_k127_7510809_7 Nucleotidyl transferase K00978 - 2.7.7.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 319.0
BYD3_k127_7510809_8 Peptidase dimerisation domain K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 304.0
BYD3_k127_7510809_9 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01885,K01894 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001046 290.0
BYD3_k127_7548863_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 6.144e-279 885.0
BYD3_k127_7548863_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008192 568.0
BYD3_k127_7548863_10 SpoIVB peptidase S55 - - - 0.0000000000000000000000000000000000000000000000000000000000000000003486 254.0
BYD3_k127_7548863_11 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000001073 244.0
BYD3_k127_7548863_12 PFAM EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000125 223.0
BYD3_k127_7548863_13 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000104 213.0
BYD3_k127_7548863_14 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000001266 194.0
BYD3_k127_7548863_15 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000000000000000000000001305 184.0
BYD3_k127_7548863_16 diguanylate cyclase - - - 0.00000000000000000000000000000000000000001771 171.0
BYD3_k127_7548863_17 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000005221 152.0
BYD3_k127_7548863_18 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000001985 110.0
BYD3_k127_7548863_19 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000002344 101.0
BYD3_k127_7548863_2 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008957 539.0
BYD3_k127_7548863_20 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000006496 104.0
BYD3_k127_7548863_21 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000004491 70.0
BYD3_k127_7548863_23 general secretion pathway protein K02246,K02456,K10924 - - 0.0000001039 62.0
BYD3_k127_7548863_24 SMART helix-turn-helix domain protein - - - 0.000001503 55.0
BYD3_k127_7548863_25 transcriptional regulator, SARP family - - - 0.00003583 55.0
BYD3_k127_7548863_26 protein conserved in archaea - - - 0.00007588 55.0
BYD3_k127_7548863_3 Elongation factor SelB, winged helix K03833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 436.0
BYD3_k127_7548863_4 Phosphoglycerate kinase K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 442.0
BYD3_k127_7548863_5 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003552 270.0
BYD3_k127_7548863_6 histidine kinase A domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001188 286.0
BYD3_k127_7548863_7 Belongs to the peptidase S8 family K17734 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001682 283.0
BYD3_k127_7548863_8 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008197 277.0
BYD3_k127_7548863_9 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000956 254.0
BYD3_k127_7554409_0 Integrase core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 411.0
BYD3_k127_7554409_1 PFAM IstB domain protein ATP-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001259 248.0
BYD3_k127_7554416_0 COG0668 Small-conductance mechanosensitive channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 582.0
BYD3_k127_7554416_1 Predicted membrane protein (DUF2254) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 486.0
BYD3_k127_7554416_2 Putative transposase - - - 0.000000000000001028 83.0
BYD3_k127_7554416_3 Alternative locus ID - - - 0.0001057 49.0
BYD3_k127_7571709_0 fimbrial usher porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 341.0
BYD3_k127_7571709_1 Protein of unknown function (DUF1579) - - - 0.00000000000000000000000000000000000000000000000000000000000000001088 234.0
BYD3_k127_7571709_2 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000000692 236.0
BYD3_k127_7582409_0 Belongs to the peptidase S51 family K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000001546 264.0
BYD3_k127_7582409_1 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000000000000000000000000000000000002932 221.0
BYD3_k127_7582409_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000000000000000000000000000000000000000008584 233.0
BYD3_k127_7582409_3 Protein of unknown function (DUF1203) - - - 0.000000000000000000000000000000000000000000000009475 176.0
BYD3_k127_7582409_4 - - - - 0.0000000000000000000000000000000000000002095 159.0
BYD3_k127_7582409_5 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000001811 143.0
BYD3_k127_7582409_6 Toxic component of a toxin-antitoxin (TA) module K07171 GO:0008150,GO:0040008,GO:0045926,GO:0048519,GO:0050789,GO:0065007 - 0.0000000000000001453 92.0
BYD3_k127_7582409_7 Tetratricopeptide repeat - - - 0.0000000000000002236 87.0
BYD3_k127_7582409_8 PFAM von Willebrand factor type A K07114 - - 0.0000000000003428 75.0
BYD3_k127_7582409_9 Poly (ADP-ribose) polymerase K10798 GO:0000002,GO:0000003,GO:0000122,GO:0000166,GO:0000228,GO:0000302,GO:0000303,GO:0000305,GO:0000715,GO:0000723,GO:0000724,GO:0000725,GO:0000785,GO:0000790,GO:0000791,GO:0000976,GO:0000977,GO:0000981,GO:0001012,GO:0001067,GO:0001228,GO:0001817,GO:0001818,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002225,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002759,GO:0002760,GO:0002784,GO:0002786,GO:0002791,GO:0002792,GO:0002803,GO:0002805,GO:0002807,GO:0002808,GO:0002831,GO:0002833,GO:0002920,GO:0002922,GO:0003002,GO:0003006,GO:0003254,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003700,GO:0003824,GO:0003909,GO:0003910,GO:0003950,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005667,GO:0005694,GO:0005700,GO:0005703,GO:0005719,GO:0005730,GO:0005737,GO:0005739,GO:0006139,GO:0006140,GO:0006163,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006282,GO:0006284,GO:0006289,GO:0006293,GO:0006294,GO:0006296,GO:0006302,GO:0006310,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006471,GO:0006508,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006963,GO:0006974,GO:0006979,GO:0006996,GO:0006997,GO:0007000,GO:0007005,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007389,GO:0007552,GO:0007610,GO:0008069,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009266,GO:0009303,GO:0009314,GO:0009408,GO:0009410,GO:0009411,GO:0009416,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009798,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009950,GO:0009953,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010212,GO:0010243,GO:0010332,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010604,GO:0010605,GO:0010611,GO:0010613,GO:0010628,GO:0010629,GO:0010639,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0010990,GO:0012501,GO:0012505,GO:0014070,GO:0014742,GO:0014743,GO:0015030,GO:0016043,GO:0016070,GO:0016072,GO:0016333,GO:0016334,GO:0016485,GO:0016540,GO:0016604,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016886,GO:0017144,GO:0018130,GO:0018193,GO:0018209,GO:0018312,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022616,GO:0023019,GO:0023051,GO:0023052,GO:0023056,GO:0030097,GO:0030099,GO:0030154,GO:0030225,GO:0030331,GO:0030534,GO:0030575,GO:0030576,GO:0030707,GO:0030808,GO:0030809,GO:0030855,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031334,GO:0031347,GO:0031349,GO:0031960,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032042,GO:0032101,GO:0032103,GO:0032200,GO:0032204,GO:0032205,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032660,GO:0032700,GO:0032774,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033143,GO:0033145,GO:0033146,GO:0033148,GO:0033365,GO:0033554,GO:0033683,GO:0033993,GO:0034248,GO:0034250,GO:0034504,GO:0034599,GO:0034605,GO:0034613,GO:0034614,GO:0034622,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0034660,GO:0035079,GO:0035080,GO:0035257,GO:0035258,GO:0035363,GO:0036094,GO:0036211,GO:0040008,GO:0040009,GO:0042220,GO:0042221,GO:0042391,GO:0042393,GO:0042493,GO:0042592,GO:0042769,GO:0042802,GO:0042826,GO:0042981,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043279,GO:0043388,GO:0043412,GO:0043434,GO:0043484,GO:0043502,GO:0043504,GO:0043523,GO:0043565,GO:0043900,GO:0043902,GO:0043933,GO:0044030,GO:0044057,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0045087,GO:0045185,GO:0045595,GO:0045597,GO:0045739,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045936,GO:0045944,GO:0045980,GO:0046034,GO:0046332,GO:0046483,GO:0047485,GO:0048037,GO:0048148,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048545,GO:0048583,GO:0048584,GO:0048609,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050662,GO:0050707,GO:0050708,GO:0050709,GO:0050710,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050879,GO:0050881,GO:0050882,GO:0050896,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051052,GO:0051053,GO:0051054,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051103,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051223,GO:0051224,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051287,GO:0051385,GO:0051427,GO:0051457,GO:0051604,GO:0051606,GO:0051641,GO:0051651,GO:0051704,GO:0051716,GO:0051881,GO:0051900,GO:0051901,GO:0055086,GO:0060249,GO:0060255,GO:0060341,GO:0060359,GO:0060390,GO:0060391,GO:0060429,GO:0062012,GO:0062014,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070212,GO:0070412,GO:0070727,GO:0070848,GO:0070887,GO:0070911,GO:0071214,GO:0071241,GO:0071248,GO:0071294,GO:0071310,GO:0071363,GO:0071375,GO:0071417,GO:0071450,GO:0071451,GO:0071478,GO:0071482,GO:0071495,GO:0071559,GO:0071560,GO:0071704,GO:0071824,GO:0071840,GO:0072347,GO:0072521,GO:0072595,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090092,GO:0090100,GO:0090257,GO:0090304,GO:0090305,GO:0097159,GO:0097305,GO:0097659,GO:0098687,GO:0098781,GO:0104004,GO:0140096,GO:0140097,GO:0140110,GO:1900180,GO:1900182,GO:1900371,GO:1900372,GO:1900407,GO:1900424,GO:1900426,GO:1900542,GO:1900543,GO:1901135,GO:1901214,GO:1901216,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901652,GO:1901653,GO:1901654,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902175,GO:1902531,GO:1902679,GO:1902680,GO:1902882,GO:1903201,GO:1903203,GO:1903376,GO:1903506,GO:1903507,GO:1903508,GO:1903516,GO:1903518,GO:1903530,GO:1903531,GO:1903578,GO:1903579,GO:1903827,GO:1903829,GO:1904044,GO:1904181,GO:1904356,GO:1904357,GO:1904645,GO:1904646,GO:1904760,GO:1904762,GO:1904950,GO:1905076,GO:1905077,GO:1990404,GO:1990837,GO:1990966,GO:2000112,GO:2000113,GO:2000677,GO:2000679,GO:2001020,GO:2001022,GO:2001141,GO:2001169,GO:2001170,GO:2001233,GO:2001242,GO:2001251 2.4.2.30 0.0000007324 60.0
BYD3_k127_7637200_0 amine dehydrogenase activity - - - 1.013e-253 816.0
BYD3_k127_7637200_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005139 321.0
BYD3_k127_7637200_2 Protease prsW family - - - 0.00000000000000000000000003146 126.0
BYD3_k127_7686256_0 Alpha-amylase domain K01176 - 3.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 578.0
BYD3_k127_7686256_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 517.0
BYD3_k127_7686256_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009119 486.0
BYD3_k127_7686256_3 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009897 304.0
BYD3_k127_7686256_4 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001069 274.0
BYD3_k127_7686256_5 ABC transporter permease K02005 - - 0.0000000000000000000000000000000000000000000000000000000007598 219.0
BYD3_k127_7686256_6 DNA binding - - - 0.0000000000000000000000000000000000000000000000000000002893 210.0
BYD3_k127_7686256_7 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000004443 219.0
BYD3_k127_7686256_8 Protein of unknown function (DUF962) - - - 0.00000000000000000000002879 111.0
BYD3_k127_7686256_9 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000663 98.0
BYD3_k127_7691141_0 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.00000000000000006875 82.0
BYD3_k127_7691141_1 - - - - 0.00000000002049 74.0
BYD3_k127_7691141_2 Glycine cleavage T-protein C-terminal barrel domain - - - 0.000000338 58.0
BYD3_k127_7774136_0 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000004395 203.0
BYD3_k127_7774136_1 Beta-lactamase - - - 0.0000000000000000000000001943 117.0
BYD3_k127_7792736_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.321 0.0 3103.0
BYD3_k127_7792736_1 PhoPQ-activated pathogenicity-related protein - - - 0.00000000000000000000000002524 121.0
BYD3_k127_7810134_0 Mismatch repair ATPase (MutS family) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 567.0
BYD3_k127_7810134_1 Bacterial Ig-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 486.0
BYD3_k127_7810134_2 antibiotic biosynthetic process K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 475.0
BYD3_k127_7810134_3 Ion channel K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002275 273.0
BYD3_k127_7810134_4 DNA-templated transcription, initiation - - - 0.0000000000001231 82.0
BYD3_k127_7810134_5 Tetratricopeptide repeats - - - 0.00003116 56.0
BYD3_k127_7847454_0 PFAM Mo-co oxidoreductase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 367.0
BYD3_k127_7847454_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 333.0
BYD3_k127_7847454_2 cell redox homeostasis - - - 0.0000000000000000000000000000000000000000000000000000000001357 211.0
BYD3_k127_7847454_3 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.000000000000000000000000000000000000001558 149.0
BYD3_k127_7847454_4 - - - - 0.0000000000000000000000000000000000004202 153.0
BYD3_k127_7847454_6 - - - - 0.000000000008395 74.0
BYD3_k127_7847454_7 salt-induced outer membrane protein - - - 0.0000000001566 71.0
BYD3_k127_7847454_8 Belongs to the Dps family K04047 - - 0.0000000107 56.0
BYD3_k127_7892274_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 2.9e-246 776.0
BYD3_k127_7892274_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 539.0
BYD3_k127_7892274_10 Subtilase family - - - 0.000000007739 66.0
BYD3_k127_7892274_2 EVE domain - - - 0.00000000000000000000000000000000000000000000000006193 182.0
BYD3_k127_7892274_3 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000109 179.0
BYD3_k127_7892274_5 Putative restriction endonuclease - - - 0.000000000000000000000000000000000006433 143.0
BYD3_k127_7892274_6 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000006273 140.0
BYD3_k127_7892274_7 Response regulator receiver domain - - - 0.0000000000000000002716 101.0
BYD3_k127_7892274_8 sigma factor antagonist activity K04757,K17752 - 2.7.11.1 0.000000000000000001459 99.0
BYD3_k127_7892274_9 YCII-related domain - - - 0.00000000000394 66.0
BYD3_k127_7914714_0 PFAM ABC transporter K06020 - 3.6.3.25 5.688e-254 795.0
BYD3_k127_7914714_1 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 3.356e-225 719.0
BYD3_k127_7914714_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000001664 223.0
BYD3_k127_7914714_11 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000001961 231.0
BYD3_k127_7914714_12 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000009198 220.0
BYD3_k127_7914714_13 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000001303 215.0
BYD3_k127_7914714_14 - - - - 0.000000000000000000000000000000000000000000000000000000001653 217.0
BYD3_k127_7914714_15 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000005269 165.0
BYD3_k127_7914714_16 - - - - 0.000000000000000002185 92.0
BYD3_k127_7914714_17 lyase activity - - - 0.000000000001307 76.0
BYD3_k127_7914714_19 SnoaL-like domain - - - 0.000001267 59.0
BYD3_k127_7914714_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase K15975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007529 517.0
BYD3_k127_7914714_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 339.0
BYD3_k127_7914714_4 AAA ATPase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 338.0
BYD3_k127_7914714_5 Putative esterase K07017 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 303.0
BYD3_k127_7914714_6 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 305.0
BYD3_k127_7914714_7 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 295.0
BYD3_k127_7914714_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002372 256.0
BYD3_k127_7914714_9 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.000000000000000000000000000000000000000000000000000000000000001662 233.0
BYD3_k127_7930829_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 550.0
BYD3_k127_7930829_1 Fumarylacetoacetate (FAA) hydrolase family K16165 - 3.7.1.20 0.0000000000000000000000000000000000000000000000000000000002025 223.0
BYD3_k127_7930829_2 NUDIX domain - - - 0.0000000000000000000000000000000000000000002214 167.0
BYD3_k127_7930829_3 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K02548 - 2.5.1.74 0.00000000000000000000000000000000000002392 154.0
BYD3_k127_7930829_4 - - - - 0.00000000000000000000000000000000004475 146.0
BYD3_k127_7930829_5 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000001648 139.0
BYD3_k127_7975712_0 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 379.0
BYD3_k127_7975712_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01524,K07012 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009295 320.0
BYD3_k127_7975712_2 uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002326 285.0
BYD3_k127_7975712_3 UbiA prenyltransferase family K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000001142 259.0
BYD3_k127_7975712_4 Amidohydrolase family K20810 - 3.5.4.40 0.000000000000000000000000000000000000000000000003398 184.0
BYD3_k127_7975712_5 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000001265 186.0
BYD3_k127_7975712_6 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000003368 146.0
BYD3_k127_7975712_7 Phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000000000000007839 119.0
BYD3_k127_7975712_8 Glutathione peroxidase - - - 0.000000000000000000007164 110.0
BYD3_k127_7975712_9 Glycosyltransferase family 9 (heptosyltransferase) K02841,K02843 - - 0.00000000000000006055 94.0
BYD3_k127_7982668_0 oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor K00311 GO:0003674,GO:0003824,GO:0004174,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016645,GO:0016649,GO:0016722,GO:0017133,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032592,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043783,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045251,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070013,GO:0098573,GO:0098798,GO:1902494,GO:1990204 1.5.5.1 1.348e-197 641.0
BYD3_k127_7982668_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006705 507.0
BYD3_k127_7982668_10 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000001082 218.0
BYD3_k127_7982668_11 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000008171 186.0
BYD3_k127_7982668_12 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000002007 193.0
BYD3_k127_7982668_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000002562 192.0
BYD3_k127_7982668_14 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000002886 177.0
BYD3_k127_7982668_15 O-antigen ligase like membrane protein - - - 0.000000000000000000000000000001013 137.0
BYD3_k127_7982668_16 Protein containing von Willebrand factor type A (VWA) domain K07161 - - 0.000000000000000000000000000001025 136.0
BYD3_k127_7982668_17 COG2146 Ferredoxin subunits of nitrite reductase and K00363,K05710 - 1.7.1.15 0.0000000000000000000000003577 108.0
BYD3_k127_7982668_19 - - - - 0.00000000001417 72.0
BYD3_k127_7982668_2 MgsA AAA+ ATPase C terminal K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 489.0
BYD3_k127_7982668_20 ig-like, plexins, transcription factors - - - 0.000000004239 68.0
BYD3_k127_7982668_21 serine threonine protein kinase K12132 - 2.7.11.1 0.000006695 60.0
BYD3_k127_7982668_22 Putative beta-barrel porin 2 - - - 0.0005702 50.0
BYD3_k127_7982668_3 ATPase, AAA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006501 336.0
BYD3_k127_7982668_4 PFAM lipopolysaccharide biosynthesis protein K16554 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007666 358.0
BYD3_k127_7982668_5 Pfam Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 312.0
BYD3_k127_7982668_6 RNB K01147 - 3.1.13.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000003745 286.0
BYD3_k127_7982668_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000297 230.0
BYD3_k127_7982668_8 Polysaccharide export protein K01991,K20988 - - 0.000000000000000000000000000000000000000000000000000000000000132 227.0
BYD3_k127_7982668_9 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000002003 202.0
BYD3_k127_8047757_0 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016822,GO:0016823,GO:0019439,GO:0019441,GO:0019752,GO:0030429,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.7.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006542 490.0
BYD3_k127_8047757_1 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 475.0
BYD3_k127_8047757_2 FAD binding domain K00486 - 1.14.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003565 383.0
BYD3_k127_8047757_3 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.00000000000000000000000000000000000000000000000000000000000000000008488 234.0
BYD3_k127_8047757_4 Phosphodiester glycosidase - - - 0.00000000000000000000000000000000000000000000942 173.0
BYD3_k127_8109997_0 PBS lyase HEAT-like repeat - - - 0.000000000000000000000000000005512 128.0
BYD3_k127_8126856_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000001558 122.0
BYD3_k127_8126856_2 Belongs to the peptidase S8 family - - - 0.00014 49.0
BYD3_k127_8128093_0 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 460.0
BYD3_k127_8128093_1 aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 372.0
BYD3_k127_8128093_2 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 343.0
BYD3_k127_8128093_3 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000504 136.0
BYD3_k127_8136598_0 SMART Integrin alpha beta-propellor repeat protein - - - 7.552e-204 686.0
BYD3_k127_8136598_1 alpha/beta hydrolase fold K22318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 340.0
BYD3_k127_8136598_2 Pkd domain containing protein K12567 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 361.0
BYD3_k127_8150395_0 amine oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006782 627.0
BYD3_k127_8150395_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 472.0
BYD3_k127_8150395_10 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000006128 245.0
BYD3_k127_8150395_11 Domain of unknown function (DUF4010) - - - 0.00000000000000000000000000000000000000000000000000000000003143 222.0
BYD3_k127_8150395_12 response regulator receiver K07776 - - 0.000000000000000000000000000000000000000000000000002261 190.0
BYD3_k127_8150395_13 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000002847 203.0
BYD3_k127_8150395_14 membrane - - - 0.0000000000000000000000000000000000000000000000276 173.0
BYD3_k127_8150395_15 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000273 181.0
BYD3_k127_8150395_16 glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000002562 179.0
BYD3_k127_8150395_17 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000002202 176.0
BYD3_k127_8150395_18 PFAM Glycosyl transferase, group 1 K13668 - 2.4.1.346 0.0000000000000000000000000000000000000000004987 173.0
BYD3_k127_8150395_19 PFAM Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000002679 165.0
BYD3_k127_8150395_2 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004596 424.0
BYD3_k127_8150395_20 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000257 172.0
BYD3_k127_8150395_21 glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000001117 166.0
BYD3_k127_8150395_22 Aminoglycoside/hydroxyurea antibiotic resistance kinase K04343 - 2.7.1.72 0.000000000000000000000000000000000000009492 154.0
BYD3_k127_8150395_23 involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000001304 157.0
BYD3_k127_8150395_24 NmrA-like family - - - 0.0000000000000000000000000000000000003427 161.0
BYD3_k127_8150395_25 exonuclease activity K16899 - 3.6.4.12 0.000000000000000000000000000002108 141.0
BYD3_k127_8150395_26 - - - - 0.000000000000000000000000000004021 138.0
BYD3_k127_8150395_27 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000009587 131.0
BYD3_k127_8150395_28 chaperone-mediated protein folding - - - 0.00000000000000000000000000319 130.0
BYD3_k127_8150395_29 Protein of unknown function (DUF2723) - - - 0.0000000000000000000000004287 121.0
BYD3_k127_8150395_3 Domain of unknown function (DUF4301) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008819 409.0
BYD3_k127_8150395_30 - - - - 0.0000000000000000000000006594 110.0
BYD3_k127_8150395_31 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000005233 120.0
BYD3_k127_8150395_32 Glycosyl transferase family 2 - - - 0.00000000000000000000001756 117.0
BYD3_k127_8150395_33 oligosaccharyl transferase activity - - - 0.0000000000000000002365 102.0
BYD3_k127_8150395_35 - - - - 0.00000000000000004864 93.0
BYD3_k127_8150395_36 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000002188 94.0
BYD3_k127_8150395_37 PFAM Methyltransferase type 11 - - - 0.0000000000000002912 88.0
BYD3_k127_8150395_4 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 347.0
BYD3_k127_8150395_40 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00002856 46.0
BYD3_k127_8150395_41 Glycosyltransferase family 87 K13671 - - 0.00003737 56.0
BYD3_k127_8150395_42 Matrix metallopeptidase 9 K01403 GO:0000003,GO:0000302,GO:0001101,GO:0001501,GO:0001503,GO:0001655,GO:0001666,GO:0001704,GO:0001706,GO:0001775,GO:0001822,GO:0001932,GO:0001934,GO:0001968,GO:0002237,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002520,GO:0002521,GO:0002573,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0004252,GO:0005488,GO:0005515,GO:0005518,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0006979,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007369,GO:0007492,GO:0007507,GO:0007565,GO:0007566,GO:0007567,GO:0007568,GO:0007584,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008237,GO:0008270,GO:0008284,GO:0008285,GO:0009056,GO:0009266,GO:0009314,GO:0009408,GO:0009416,GO:0009605,GO:0009607,GO:0009612,GO:0009617,GO:0009628,GO:0009636,GO:0009642,GO:0009644,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009888,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010039,GO:0010041,GO:0010243,GO:0010466,GO:0010562,GO:0010604,GO:0010605,GO:0010632,GO:0010634,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010821,GO:0010822,GO:0010941,GO:0010942,GO:0010951,GO:0012505,GO:0014070,GO:0016032,GO:0016043,GO:0016192,GO:0016787,GO:0017171,GO:0019048,GO:0019087,GO:0019220,GO:0019221,GO:0019222,GO:0019538,GO:0022411,GO:0022414,GO:0022603,GO:0022607,GO:0022617,GO:0022898,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030097,GO:0030099,GO:0030141,GO:0030154,GO:0030162,GO:0030198,GO:0030225,GO:0030334,GO:0030335,GO:0030574,GO:0031323,GO:0031324,GO:0031325,GO:0031399,GO:0031401,GO:0031410,GO:0031667,GO:0031668,GO:0031915,GO:0031974,GO:0031982,GO:0032092,GO:0032268,GO:0032269,GO:0032270,GO:0032355,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032496,GO:0032501,GO:0032502,GO:0032526,GO:0032879,GO:0032940,GO:0032963,GO:0032991,GO:0033043,GO:0033189,GO:0033273,GO:0033554,GO:0033993,GO:0034097,GO:0034599,GO:0034612,GO:0034614,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0035094,GO:0035821,GO:0035987,GO:0036230,GO:0036293,GO:0036296,GO:0040012,GO:0040017,GO:0042058,GO:0042119,GO:0042127,GO:0042221,GO:0042325,GO:0042327,GO:0042493,GO:0042802,GO:0042981,GO:0043062,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043086,GO:0043154,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043233,GO:0043269,GO:0043271,GO:0043281,GO:0043299,GO:0043312,GO:0043388,GO:0043393,GO:0043933,GO:0044003,GO:0044085,GO:0044092,GO:0044093,GO:0044238,GO:0044403,GO:0044419,GO:0044421,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0044877,GO:0045055,GO:0045321,GO:0045471,GO:0045742,GO:0045765,GO:0045766,GO:0045861,GO:0045937,GO:0046677,GO:0046686,GO:0046872,GO:0046903,GO:0046914,GO:0048013,GO:0048145,GO:0048147,GO:0048167,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048584,GO:0048585,GO:0048598,GO:0048646,GO:0048660,GO:0048661,GO:0048731,GO:0048771,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050804,GO:0050896,GO:0051049,GO:0051051,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051259,GO:0051270,GO:0051272,GO:0051336,GO:0051346,GO:0051547,GO:0051549,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0052547,GO:0052548,GO:0055093,GO:0055094,GO:0060255,GO:0060548,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070011,GO:0070013,GO:0070482,GO:0070555,GO:0070820,GO:0070887,GO:0071216,GO:0071219,GO:0071222,GO:0071241,GO:0071248,GO:0071276,GO:0071281,GO:0071283,GO:0071310,GO:0071345,GO:0071347,GO:0071356,GO:0071396,GO:0071402,GO:0071404,GO:0071460,GO:0071496,GO:0071704,GO:0071840,GO:0072001,GO:0072359,GO:0080090,GO:0090199,GO:0090200,GO:0097305,GO:0097708,GO:0099177,GO:0099503,GO:0101002,GO:0140096,GO:1900120,GO:1900122,GO:1901184,GO:1901186,GO:1901342,GO:1901564,GO:1901698,GO:1901700,GO:1901701,GO:1902531,GO:1902532,GO:1904018,GO:1904062,GO:1904063,GO:1904705,GO:1904707,GO:1904724,GO:1904813,GO:2000026,GO:2000116,GO:2000117,GO:2000145,GO:2000147,GO:2001233,GO:2001234,GO:2001235,GO:2001242,GO:2001243,GO:2001257,GO:2001258,GO:2001267,GO:2001268 3.4.24.35 0.0001282 51.0
BYD3_k127_8150395_43 CHAT domain - - - 0.0003789 54.0
BYD3_k127_8150395_44 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000642 49.0
BYD3_k127_8150395_45 polysaccharide biosynthetic process K19418 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0007566 52.0
BYD3_k127_8150395_5 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008432 353.0
BYD3_k127_8150395_6 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 352.0
BYD3_k127_8150395_7 TonB-dependent Receptor Plug K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005373 336.0
BYD3_k127_8150395_8 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003941 320.0
BYD3_k127_8150395_9 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000004204 268.0
BYD3_k127_8160387_0 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000001614 214.0
BYD3_k127_8160387_1 regulation of canonical Wnt signaling pathway involved in osteoblast differentiation - - - 0.00000000000000000000000000000000000000000000002499 190.0
BYD3_k127_8164833_0 B12 binding domain K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.0 1527.0
BYD3_k127_8164833_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00383 - 1.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 531.0
BYD3_k127_8164833_2 ABC transporter K06147,K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008073 515.0
BYD3_k127_8164833_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 451.0
BYD3_k127_8164833_4 (ABC) transporter K06147,K18889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006815 412.0
BYD3_k127_8164833_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 304.0
BYD3_k127_8164833_6 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000002481 258.0
BYD3_k127_8164833_7 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000007383 161.0
BYD3_k127_8164833_8 - - - - 0.00000000000000000002477 100.0
BYD3_k127_8175410_0 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803 539.0
BYD3_k127_8182982_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 5.017e-304 957.0
BYD3_k127_8182982_1 X-Pro dipeptidyl-peptidase (S15 family) - - - 2.395e-235 755.0
BYD3_k127_8182982_10 RES - - - 0.000000000000000000000000000000004635 140.0
BYD3_k127_8182982_11 Protein of unknown function (DUF2384) - - - 0.0000000000000000000000000000004281 126.0
BYD3_k127_8182982_12 - - - - 0.0000000000000000000000000006725 127.0
BYD3_k127_8182982_13 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.000000000000000000000000001581 123.0
BYD3_k127_8182982_14 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 GO:0005575,GO:0005576 1.3.3.11 0.00000000000000001035 93.0
BYD3_k127_8182982_15 Polysaccharide biosynthesis C-terminal domain - - - 0.0000000000000005241 91.0
BYD3_k127_8182982_16 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000001975 68.0
BYD3_k127_8182982_17 chlorophyll binding - - - 0.000000000505 61.0
BYD3_k127_8182982_18 Membrane - - - 0.00000000346 70.0
BYD3_k127_8182982_19 serine threonine protein kinase K12132 - 2.7.11.1 0.00000003048 68.0
BYD3_k127_8182982_2 Thrombospondin type 3 repeat - - - 6.01e-220 739.0
BYD3_k127_8182982_20 Translation initiation factor K03113 - - 0.00000009978 63.0
BYD3_k127_8182982_21 - - - - 0.000006919 55.0
BYD3_k127_8182982_22 hyperosmotic response - - - 0.00003864 50.0
BYD3_k127_8182982_3 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005583 342.0
BYD3_k127_8182982_4 metallophosphoesterase K07096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009366 331.0
BYD3_k127_8182982_5 MatE K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006341 336.0
BYD3_k127_8182982_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009188 292.0
BYD3_k127_8182982_7 PFAM Protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000144 247.0
BYD3_k127_8182982_8 TatD family K03424 - - 0.00000000000000000000000000000000000000000000000002008 188.0
BYD3_k127_8182982_9 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000001052 160.0
BYD3_k127_8219369_0 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 438.0
BYD3_k127_8219369_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 417.0
BYD3_k127_8219369_2 ATP ADP translocase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 405.0
BYD3_k127_8219369_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000001097 165.0
BYD3_k127_8219369_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000002625 156.0
BYD3_k127_8219369_5 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000001883 96.0
BYD3_k127_8241926_0 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000005305 236.0
BYD3_k127_8241926_1 6 heme-binding sites - - - 0.0000000000000000003478 89.0
BYD3_k127_8264270_0 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 523.0
BYD3_k127_8264270_1 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 516.0
BYD3_k127_8264270_2 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 367.0
BYD3_k127_8264270_3 PFAM von Willebrand factor type A - - - 0.000000000000000000000000000000000000007813 168.0
BYD3_k127_8264270_4 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000004597 119.0
BYD3_k127_8264270_5 Alternative locus ID - - - 0.00000000000003773 85.0
BYD3_k127_8264270_6 Carboxypeptidase regulatory-like domain - - - 0.00000878 56.0
BYD3_k127_8305869_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.76e-216 683.0
BYD3_k127_8305869_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 568.0
BYD3_k127_8318015_1 Sortase family K07284 - 3.4.22.70 0.000000000000000000000000000000000000259 143.0
BYD3_k127_8318015_2 - - - - 0.000000000000000000000005679 115.0
BYD3_k127_8318015_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00005104 51.0
BYD3_k127_8480745_0 oligosaccharyl transferase activity - - - 0.0000000000000000000000001392 123.0
BYD3_k127_8480745_1 Sodium/hydrogen exchanger family - - - 0.00000000000000334 81.0
BYD3_k127_8497687_0 Belongs to the enoyl-CoA hydratase isomerase family K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 5.457e-208 667.0
BYD3_k127_8497687_1 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 531.0
BYD3_k127_8497687_2 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 407.0
BYD3_k127_8497687_3 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 348.0
BYD3_k127_8497687_4 L-carnitine dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001115 273.0
BYD3_k127_8497687_5 Peptidase, S41 - - - 0.0000000000000000000000000000000000000000000000000000000000000000816 235.0
BYD3_k127_8497687_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000002551 214.0
BYD3_k127_8497687_7 membrane K08983 - - 0.000000000000000000000000001047 122.0
BYD3_k127_8497687_8 Lanthionine synthetase C-like protein K20484 - - 0.00007494 46.0
BYD3_k127_8497687_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0001971 53.0
BYD3_k127_8502711_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000643 251.0
BYD3_k127_8502711_1 Eukaryotic integral membrane protein (DUF1751) - - - 0.000000000000000000000000000000000000000001127 166.0
BYD3_k127_8502711_2 Tetratricopeptide repeat - - - 0.00009889 48.0
BYD3_k127_8517847_0 Heat shock 70 kDa protein K04043 - - 5.083e-291 907.0
BYD3_k127_8517847_1 PFAM Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.973e-239 751.0
BYD3_k127_8517847_10 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000144 266.0
BYD3_k127_8517847_11 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002019 261.0
BYD3_k127_8517847_12 SelR domain K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000003886 256.0
BYD3_k127_8517847_13 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000001401 247.0
BYD3_k127_8517847_14 transport system involved in gliding motility, auxiliary K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000335 262.0
BYD3_k127_8517847_15 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000001139 242.0
BYD3_k127_8517847_16 Diacylglycerol kinase catalytic domain (presumed) K07029 GO:0003674,GO:0003824,GO:0004143,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.107 0.00000000000000000000000000000000000000000000000000000000000000000008919 243.0
BYD3_k127_8517847_17 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000002505 234.0
BYD3_k127_8517847_18 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000004501 231.0
BYD3_k127_8517847_19 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000000000000000000000000003669 218.0
BYD3_k127_8517847_2 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 2.441e-212 678.0
BYD3_k127_8517847_20 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000006965 198.0
BYD3_k127_8517847_21 B12 binding domain K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000002325 202.0
BYD3_k127_8517847_22 thiolester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000003083 192.0
BYD3_k127_8517847_23 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000001173 177.0
BYD3_k127_8517847_24 IstB-like ATP binding protein K02315 - - 0.0000000000000000000000000000000000000000000121 171.0
BYD3_k127_8517847_25 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000001307 183.0
BYD3_k127_8517847_26 - K01992 - - 0.00000000000000000000000000000000003781 147.0
BYD3_k127_8517847_27 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000703 136.0
BYD3_k127_8517847_28 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.00000000000000000000000000005829 135.0
BYD3_k127_8517847_29 PFAM regulatory protein, MerR K13640 - - 0.0000000000000000000000000002931 117.0
BYD3_k127_8517847_3 CBS domain containing protein K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 521.0
BYD3_k127_8517847_30 - - - - 0.000000000000000000000000004529 115.0
BYD3_k127_8517847_31 Platelet-activating factor acetylhydrolase, isoform II - - - 0.0000000000000000000000006633 117.0
BYD3_k127_8517847_32 Hsp20/alpha crystallin family - - - 0.00000000000000000000183 99.0
BYD3_k127_8517847_33 acylphosphatase activity K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.000000000000003353 79.0
BYD3_k127_8517847_34 Methyltransferase domain - - - 0.00000000000005999 83.0
BYD3_k127_8517847_35 Domain of unknown function (DUF1844) - - - 0.000000002539 66.0
BYD3_k127_8517847_36 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K09774 - - 0.00000004882 66.0
BYD3_k127_8517847_38 Domain of unknown function (DUF4340) - - - 0.0000767 57.0
BYD3_k127_8517847_39 Tetratricopeptide repeat-like domain - - - 0.0005605 51.0
BYD3_k127_8517847_4 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 432.0
BYD3_k127_8517847_5 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 388.0
BYD3_k127_8517847_6 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 362.0
BYD3_k127_8517847_7 PFAM ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 307.0
BYD3_k127_8517847_8 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008639 302.0
BYD3_k127_8517847_9 MazG family K02499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005356 274.0
BYD3_k127_8518458_0 Putative metal-binding domain of cation transport ATPase K01533 - 3.6.3.4 6.278e-225 724.0
BYD3_k127_8518458_1 ATPases associated with a variety of cellular activities K09817,K11710 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 366.0
BYD3_k127_8518458_10 Cytochrome oxidase maturation protein - - - 0.00000002583 63.0
BYD3_k127_8518458_2 ABC transporter K11709,K19976 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 332.0
BYD3_k127_8518458_3 Belongs to the bacterial solute-binding protein 9 family K09818,K11707 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007054 312.0
BYD3_k127_8518458_4 ABC 3 transport family K11708 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 315.0
BYD3_k127_8518458_5 Phosphoenolpyruvate phosphomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 297.0
BYD3_k127_8518458_6 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000006631 204.0
BYD3_k127_8518458_7 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000000000000000001039 171.0
BYD3_k127_8518458_8 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000000001659 121.0
BYD3_k127_8518458_9 FixH - - - 0.0000000000000000000000001083 113.0
BYD3_k127_8521786_0 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003006 271.0
BYD3_k127_8521786_1 Belongs to the ompA family - - - 0.0000000000000000000000000000000000006603 151.0
BYD3_k127_8521786_2 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000005943 143.0
BYD3_k127_8521786_3 PFAM Rhomboid family K19225 - 3.4.21.105 0.0000000000000000000000000000000004298 151.0
BYD3_k127_8557776_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 428.0
BYD3_k127_8557776_1 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 310.0
BYD3_k127_8557776_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004786 310.0
BYD3_k127_8557776_3 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006198 292.0
BYD3_k127_8557776_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000008555 262.0
BYD3_k127_8557776_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000002992 210.0
BYD3_k127_8557776_6 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.000000000000000000000000000000000000007699 155.0
BYD3_k127_8557776_7 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000008255 80.0
BYD3_k127_8557776_9 Peptidase family M23 - - - 0.0000000001332 65.0
BYD3_k127_857145_0 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 525.0
BYD3_k127_857145_1 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 369.0
BYD3_k127_857145_2 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004475 275.0
BYD3_k127_857145_3 CHRD domain - - - 0.0000000000000000000000000000000004714 138.0
BYD3_k127_857145_4 Glucose sorbosone - - - 0.000000003769 71.0
BYD3_k127_8584008_0 surface antigen variable number repeat protein K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 422.0
BYD3_k127_8584008_1 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 289.0
BYD3_k127_8584008_3 YMGG-like Gly-zipper - - - 0.0000000000000000000000000000000004601 138.0
BYD3_k127_8584008_4 phosphorelay signal transduction system K14987 - - 0.00000000000000000000000000001371 121.0
BYD3_k127_8614515_0 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 501.0
BYD3_k127_8614515_1 - - - - 0.0000000000000000000000004098 109.0
BYD3_k127_8618882_0 Rieske-like [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 607.0
BYD3_k127_8618882_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 315.0
BYD3_k127_8618882_2 2-hydroxychromene-2-carboxylate isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000344 227.0
BYD3_k127_8618882_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000008874 136.0
BYD3_k127_8618882_4 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000009319 129.0
BYD3_k127_8618882_5 - - - - 0.00000000000002284 77.0
BYD3_k127_8618882_7 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs - - - 0.00002646 56.0
BYD3_k127_8794955_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 5.793e-245 774.0
BYD3_k127_8794955_1 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 555.0
BYD3_k127_8794955_10 TIGRFAM metallophosphoesterase, MG_246 BB_0505 family K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 290.0
BYD3_k127_8794955_11 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009149 261.0
BYD3_k127_8794955_12 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000005453 252.0
BYD3_k127_8794955_13 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000003063 238.0
BYD3_k127_8794955_14 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000006279 243.0
BYD3_k127_8794955_15 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.0000000000000000000000000000000000000000000000000009786 190.0
BYD3_k127_8794955_16 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000007648 142.0
BYD3_k127_8794955_17 Peptidase family M23 K21471 - - 0.00000000000000000000000000000000001121 151.0
BYD3_k127_8794955_18 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000001404 138.0
BYD3_k127_8794955_19 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000000000001751 92.0
BYD3_k127_8794955_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 457.0
BYD3_k127_8794955_20 repeat-containing protein - - - 0.0000000000000000000366 106.0
BYD3_k127_8794955_21 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.00000000000002471 85.0
BYD3_k127_8794955_22 Cell division protein ZapA K09888 - - 0.0000000001133 68.0
BYD3_k127_8794955_24 - - - - 0.0009827 52.0
BYD3_k127_8794955_3 TIGRFAM carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005799 432.0
BYD3_k127_8794955_4 tRNA synthetases class II core domain (F) K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 400.0
BYD3_k127_8794955_5 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 404.0
BYD3_k127_8794955_6 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008822 409.0
BYD3_k127_8794955_7 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005613 368.0
BYD3_k127_8794955_8 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 379.0
BYD3_k127_8794955_9 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003798 324.0
BYD3_k127_8826762_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 4.559e-262 837.0
BYD3_k127_8826762_1 Doubled CXXCH motif (Paired_CXXCH_1) - - - 1.405e-232 737.0
BYD3_k127_8826762_10 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000001603 211.0
BYD3_k127_8826762_11 Putative bacterial lipoprotein (DUF799) - - - 0.000000000000000000000000000000000000000000000000000639 191.0
BYD3_k127_8826762_12 - - - - 0.000000000000000000000000000000000000000002678 169.0
BYD3_k127_8826762_13 Hsp20/alpha crystallin family - - - 0.00000000000000000000000008044 113.0
BYD3_k127_8826762_14 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.000000001519 62.0
BYD3_k127_8826762_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 3.177e-217 700.0
BYD3_k127_8826762_3 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 600.0
BYD3_k127_8826762_4 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005949 505.0
BYD3_k127_8826762_5 Domains REC, sigma54 interaction, HTH8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 482.0
BYD3_k127_8826762_6 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005983 286.0
BYD3_k127_8826762_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007834 282.0
BYD3_k127_8826762_8 PPIC-type PPIASE domain - - - 0.0000000000000000000000000000000000000000000000000000000000003955 235.0
BYD3_k127_8826762_9 Nitrogen fixation master sensor histidine kinase, PAS domain-containing K02668,K07708,K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000001863 209.0
BYD3_k127_8827850_0 Carbamoyltransferase C-terminus K00612 - - 6.81e-198 626.0
BYD3_k127_8827850_1 ATPase activity K01990,K13926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 293.0
BYD3_k127_8827850_2 short-chain dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000004058 224.0
BYD3_k127_8827850_3 HlyD family secretion protein K01993 - - 0.000000000000000000000000000000000000000000001076 186.0
BYD3_k127_8827850_4 Von Willebrand factor A - - - 0.00000000000000000000001858 118.0
BYD3_k127_8827850_5 ABC transporter, ATP-binding protein K01990 - - 0.0000000000000001336 79.0
BYD3_k127_8833463_0 Protein export membrane protein - - - 5.268e-312 987.0
BYD3_k127_8833463_1 Multicopper oxidase - - - 2.766e-219 693.0
BYD3_k127_8833463_11 Stress-responsive transcriptional regulator - - - 0.000000000000000000503 89.0
BYD3_k127_8833463_12 Nodulation protein S (NodS) - - - 0.00000001267 61.0
BYD3_k127_8833463_2 ErfK YbiS YcfS YnhG family protein K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 519.0
BYD3_k127_8833463_3 Protein of unknown function (DUF2891) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 486.0
BYD3_k127_8833463_4 Phosphate transporter family K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 432.0
BYD3_k127_8833463_5 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000971 351.0
BYD3_k127_8833463_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000008802 208.0
BYD3_k127_8833463_7 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000004258 144.0
BYD3_k127_8833463_8 PFAM response regulator receiver - - - 0.0000000000000000000004027 104.0
BYD3_k127_8833463_9 long-chain fatty acid transport protein - - - 0.000000000000000000002322 102.0
BYD3_k127_8863270_0 PFAM aminotransferase, class I K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 454.0
BYD3_k127_8863270_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 412.0
BYD3_k127_8863270_10 Outer membrane receptor - - - 0.0001677 48.0
BYD3_k127_8863270_11 Major facilitator Superfamily - - - 0.0002611 53.0
BYD3_k127_8863270_2 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009701 398.0
BYD3_k127_8863270_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 339.0
BYD3_k127_8863270_4 response regulator K07685 - - 0.0000000000000000000000000000000000000000000009684 189.0
BYD3_k127_8863270_5 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000001839 167.0
BYD3_k127_8863270_6 methyltransferase K07173,K17462 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 4.4.1.21 0.000000000000008691 85.0
BYD3_k127_8863270_7 peptidyl-tyrosine sulfation - - - 0.000000000004097 79.0
BYD3_k127_8863270_8 fumarate reductase K00239 - 1.3.5.1,1.3.5.4 0.000000001153 70.0
BYD3_k127_8863270_9 COG0351 Hydroxymethylpyrimidine phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000001555 61.0
BYD3_k127_8884322_0 PFAM Mo-co oxidoreductase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003507 225.0
BYD3_k127_8890167_0 SMART Integrin alpha beta-propellor repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 602.0
BYD3_k127_8890167_1 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 421.0
BYD3_k127_8890167_2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003029 251.0
BYD3_k127_8890167_3 Crp-like helix-turn-helix domain K10914 - - 0.00000000000001021 83.0
BYD3_k127_8950593_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 542.0
BYD3_k127_8950593_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042,K17468 - 2.9.1.1,4.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 379.0
BYD3_k127_8950593_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000001301 188.0
BYD3_k127_8950593_3 - - - - 0.000000000000251 77.0
BYD3_k127_8950593_4 Tetratricopeptide repeat - - - 0.0000002116 62.0
BYD3_k127_8950593_5 - - - - 0.0001171 48.0
BYD3_k127_8993740_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 350.0
BYD3_k127_8993740_1 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 333.0
BYD3_k127_8993740_2 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002511 259.0
BYD3_k127_990316_0 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000218 304.0
BYD3_k127_990316_1 Belongs to the glycosyl hydrolase 18 family - - - 0.000003331 61.0
BYD3_k127_99354_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K01179 - 3.2.1.4 0.00005694 57.0