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Overview

ID MAG00106
Name BYD3_bin.16
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Eisenbacteria
Class RBG-16-71-46
Order SZUA-252
Family SZUA-252
Genus WS-9
Species
Assembly information
Completeness (%) 94.41
Contamination (%) 4.3
GC content (%) 70.0
N50 (bp) 16,734
Genome size (bp) 3,154,121

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2668

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1042577_0 CDP-alcohol phosphatidyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000213 229.0
BYD3_k127_1042577_1 Glycosyltransferase family 20 K16055 - 2.4.1.15,3.1.3.12 0.0000000000000000000000000000000000000004078 156.0
BYD3_k127_1121132_0 Uncharacterized protein family (UPF0051) K09014 - - 2.51e-228 729.0
BYD3_k127_1121132_1 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 1.295e-198 642.0
BYD3_k127_1121132_10 Transcriptional regulatory protein, C terminal K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 293.0
BYD3_k127_1121132_11 Ribosomal protein L11 methyltransferase (PrmA) K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002464 288.0
BYD3_k127_1121132_12 PFAM AMP-dependent synthetase and ligase K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000616 236.0
BYD3_k127_1121132_13 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000557 237.0
BYD3_k127_1121132_14 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000001621 226.0
BYD3_k127_1121132_15 Acyl-CoA reductase (LuxC) - - - 0.000000000000000000000000000000000000000000000000000000345 214.0
BYD3_k127_1121132_16 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000000000000002666 182.0
BYD3_k127_1121132_18 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000002117 166.0
BYD3_k127_1121132_19 MerR, DNA binding K19591 - - 0.000000000000000000000000000000000000000005495 160.0
BYD3_k127_1121132_2 Amino acid permease - - - 2.134e-195 630.0
BYD3_k127_1121132_20 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000000000000009496 134.0
BYD3_k127_1121132_21 of nitrite reductase and ring-hydroxylating K05710 - - 0.00000000000000000000000000008288 129.0
BYD3_k127_1121132_22 Belongs to the HesB IscA family K13628 GO:0003674,GO:0005488,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0071840 - 0.00000000000000000000001301 111.0
BYD3_k127_1121132_23 PFAM transcriptional coactivator pterin dehydratase K01724 - 4.2.1.96 0.00000000000000000000127 103.0
BYD3_k127_1121132_24 Glycine cleavage T-protein C-terminal barrel domain K06980 - - 0.00000000000000000002541 102.0
BYD3_k127_1121132_25 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000001651 81.0
BYD3_k127_1121132_27 - - - - 0.00000000001334 74.0
BYD3_k127_1121132_28 endo-1,4-beta-xylanase activity K01181 - 3.2.1.8 0.0000000001446 75.0
BYD3_k127_1121132_29 Iron-sulfur cluster assembly protein - - - 0.0000000001812 70.0
BYD3_k127_1121132_3 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 7.757e-194 621.0
BYD3_k127_1121132_30 Anti-sigma-K factor rskA - - - 0.00000001954 64.0
BYD3_k127_1121132_31 - - - - 0.00000003577 62.0
BYD3_k127_1121132_33 protein import - - - 0.0001071 56.0
BYD3_k127_1121132_34 - - - - 0.0007376 53.0
BYD3_k127_1121132_35 FlgD Ig-like domain - - - 0.0008112 53.0
BYD3_k127_1121132_4 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 518.0
BYD3_k127_1121132_5 fatty acid desaturase K00508 - 1.14.19.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 437.0
BYD3_k127_1121132_6 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006878 396.0
BYD3_k127_1121132_7 ATPases associated with a variety of cellular activities K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 361.0
BYD3_k127_1121132_8 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005747 342.0
BYD3_k127_1121132_9 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 318.0
BYD3_k127_1149845_0 PFAM FAD linked oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 513.0
BYD3_k127_1149845_1 M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 403.0
BYD3_k127_1149845_10 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000001327 159.0
BYD3_k127_1149845_11 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000001642 133.0
BYD3_k127_1149845_12 Glycosyltransferase like family 2 - GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.00000000000000000000001508 109.0
BYD3_k127_1149845_13 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000001011 102.0
BYD3_k127_1149845_14 Predicted membrane protein (DUF2231) - - - 0.000000000503 66.0
BYD3_k127_1149845_15 Surface antigen - - - 0.0001505 51.0
BYD3_k127_1149845_16 Lipid A oxidase (Involved in formation of 2-aminogluconate) protein K12980 - - 0.0009261 51.0
BYD3_k127_1149845_2 Arginase family K01476 - 3.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 359.0
BYD3_k127_1149845_3 Valyl tRNA synthetase tRNA binding arm K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004103 298.0
BYD3_k127_1149845_4 3-demethylubiquinone-9 3-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000003734 229.0
BYD3_k127_1149845_5 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000003861 233.0
BYD3_k127_1149845_6 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000000000001513 234.0
BYD3_k127_1149845_7 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.0000000000000000000000000000000000000000000000000000005978 201.0
BYD3_k127_1149845_8 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000002344 210.0
BYD3_k127_1149845_9 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000009412 196.0
BYD3_k127_11880_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 544.0
BYD3_k127_11880_1 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 531.0
BYD3_k127_11880_10 chromosome segregation K03497 - - 0.0000000000000000000000000000000001097 147.0
BYD3_k127_11880_11 DinB superfamily - - - 0.0000000000000000000000000000000002621 137.0
BYD3_k127_11880_12 Serine threonine protein kinase - - - 0.000000000000000000000000000008596 139.0
BYD3_k127_11880_13 phosphohistidine phosphatase, SixA - - - 0.0000000000000000000000000001919 132.0
BYD3_k127_11880_14 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.000000000000000002223 93.0
BYD3_k127_11880_16 extracellular matrix structural constituent - - - 0.00000002577 61.0
BYD3_k127_11880_17 Glucose / Sorbosone dehydrogenase - - - 0.000006589 54.0
BYD3_k127_11880_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 418.0
BYD3_k127_11880_3 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006977 323.0
BYD3_k127_11880_4 Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000323 275.0
BYD3_k127_11880_5 Peptidase M15 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008816 249.0
BYD3_k127_11880_6 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000004712 241.0
BYD3_k127_11880_7 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000003815 221.0
BYD3_k127_11880_8 - - - - 0.00000000000000000000000000000000000000000000000000002265 201.0
BYD3_k127_11880_9 GAF domain-containing protein K08968 - 1.8.4.14 0.00000000000000000000000000000000000000000000000000002338 192.0
BYD3_k127_1306306_0 Transglycosylase K05366 GO:0003674,GO:0005488,GO:0005515,GO:0042802 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 622.0
BYD3_k127_1306306_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 423.0
BYD3_k127_1306306_10 TIGRFAM MazG family protein K02428,K02499 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000009308 234.0
BYD3_k127_1306306_11 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000001854 219.0
BYD3_k127_1306306_12 acetyltransferase K18566 - - 0.000000000000000000000000000000000009174 156.0
BYD3_k127_1306306_13 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.0000000000000000000000000000005482 139.0
BYD3_k127_1306306_14 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.0000000000000000000000000001561 121.0
BYD3_k127_1306306_15 - - - - 0.0000000000000000000002922 103.0
BYD3_k127_1306306_16 Domain of unknown function (DUF1844) - - - 0.000000000000000000003261 97.0
BYD3_k127_1306306_17 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 0.0000315 50.0
BYD3_k127_1306306_18 Alginate lyase - - - 0.00006046 46.0
BYD3_k127_1306306_2 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 395.0
BYD3_k127_1306306_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 343.0
BYD3_k127_1306306_4 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 303.0
BYD3_k127_1306306_5 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001249 276.0
BYD3_k127_1306306_6 Conserved hypothetical protein 698 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003017 274.0
BYD3_k127_1306306_7 COG2148 Sugar transferases involved in lipopolysaccharide synthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002901 263.0
BYD3_k127_1306306_8 Arginase family K01480 - 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000001011 258.0
BYD3_k127_1306306_9 TIGRFAM Hydrolase, ortholog 1, exosortase system type 1 associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006822 269.0
BYD3_k127_1320455_0 PFAM GlcNAc-PI de-N-acetylase - - - 6.917e-225 731.0
BYD3_k127_1320455_1 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 601.0
BYD3_k127_1320455_10 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.000000000000000000000000000000000000000000000000004876 207.0
BYD3_k127_1320455_11 PFAM Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.00000000000000000000000000000000000000000000000001338 185.0
BYD3_k127_1320455_12 Redoxin - - - 0.000000000000000000000000000000003882 129.0
BYD3_k127_1320455_13 PFAM Cold-shock protein, DNA-binding K03704 - - 0.00000000000000000000000001243 109.0
BYD3_k127_1320455_14 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000001815 88.0
BYD3_k127_1320455_2 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 570.0
BYD3_k127_1320455_3 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007857 505.0
BYD3_k127_1320455_4 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 436.0
BYD3_k127_1320455_5 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 313.0
BYD3_k127_1320455_6 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002016 249.0
BYD3_k127_1320455_7 DJ-1/PfpI family K05520 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000000000000000006165 233.0
BYD3_k127_1320455_8 OmpA family - - - 0.000000000000000000000000000000000000000000000000000000000000482 219.0
BYD3_k127_1320455_9 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000000008893 217.0
BYD3_k127_1339002_0 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 315.0
BYD3_k127_1339002_1 Transcriptional regulator - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 291.0
BYD3_k127_1339002_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008634 273.0
BYD3_k127_1339002_3 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000004317 148.0
BYD3_k127_1339002_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000004912 142.0
BYD3_k127_1339002_5 protein secretion - - - 0.0000000000273 77.0
BYD3_k127_1357345_0 Phosphoesterase, PA-phosphatase related protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003024 255.0
BYD3_k127_1357345_1 PFAM ATP-grasp domain K22224 - 6.2.1.13 0.00000000000000000000000000000008238 128.0
BYD3_k127_1361090_0 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 441.0
BYD3_k127_1361090_1 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 380.0
BYD3_k127_1361090_2 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 347.0
BYD3_k127_1361090_3 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006452 290.0
BYD3_k127_1361090_4 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000004088 196.0
BYD3_k127_1361090_5 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000002121 154.0
BYD3_k127_1385211_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.342e-278 879.0
BYD3_k127_1385211_1 Methylenetetrahydrofolate reductase K00297,K00547,K00548 - 1.5.1.20,2.1.1.10,2.1.1.13 5.683e-215 685.0
BYD3_k127_1385211_10 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000002696 186.0
BYD3_k127_1385211_11 Acetyltransferase (GNAT) domain K22479 - - 0.00000000000000000000000000000000000000000000001149 194.0
BYD3_k127_1385211_12 Phosphoserine phosphatase K02203 - 2.7.1.39,3.1.3.3 0.00000000000000000000000000000000000000000001906 170.0
BYD3_k127_1385211_13 - - - - 0.000000004304 62.0
BYD3_k127_1385211_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003831 575.0
BYD3_k127_1385211_3 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 429.0
BYD3_k127_1385211_4 Aminotransferase class-V - GO:0001505,GO:0003674,GO:0003824,GO:0004760,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006807,GO:0008150,GO:0008152,GO:0008453,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019265,GO:0019752,GO:0042133,GO:0042136,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 334.0
BYD3_k127_1385211_5 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 304.0
BYD3_k127_1385211_6 NAD binding K00003,K00058,K01752,K16843 - 1.1.1.3,1.1.1.310,1.1.1.399,1.1.1.95,4.3.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 308.0
BYD3_k127_1385211_7 electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003956 297.0
BYD3_k127_1385211_8 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000001123 235.0
BYD3_k127_1385211_9 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000001033 211.0
BYD3_k127_139780_0 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000003581 263.0
BYD3_k127_139780_1 Monogalactosyldiacylglycerol (MGDG) synthase K03429,K03715 - 2.4.1.315,2.4.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000002904 263.0
BYD3_k127_139780_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000025 184.0
BYD3_k127_139780_3 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000004649 143.0
BYD3_k127_139780_4 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000008305 128.0
BYD3_k127_139780_5 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000044 106.0
BYD3_k127_139780_6 Belongs to the UPF0109 family K06960 - - 0.000000000000000006347 86.0
BYD3_k127_1423081_0 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989,K02428 - 2.7.7.56,3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 304.0
BYD3_k127_1423081_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000005633 246.0
BYD3_k127_1423081_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000319 181.0
BYD3_k127_1423081_3 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000002632 114.0
BYD3_k127_1423081_4 Protein of unknown function, DUF481 K07283 - - 0.000000000000000000000000003615 124.0
BYD3_k127_1423081_5 Ami_3 K01448 - 3.5.1.28 0.0000000000000000004092 102.0
BYD3_k127_1423081_6 Sporulation and spore germination - - - 0.00000000002505 76.0
BYD3_k127_1423081_7 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000006681 57.0
BYD3_k127_152220_0 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000001605 232.0
BYD3_k127_152220_1 OsmC-like protein K04063 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748 - 0.000000000000000000000000000000000000000000000000001556 186.0
BYD3_k127_152220_2 Lipase maturation factor - - - 0.00000000000000000000000000000002951 129.0
BYD3_k127_1534041_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 4.454e-205 643.0
BYD3_k127_1534041_1 Beta-eliminating lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007727 292.0
BYD3_k127_157357_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 524.0
BYD3_k127_157357_1 PFAM Alanine dehydrogenase PNT, C-terminal domain K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 387.0
BYD3_k127_157357_2 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000006945 126.0
BYD3_k127_157357_3 DinB family - - - 0.0000008943 55.0
BYD3_k127_1608273_0 domain, Protein K08677 - - 0.000000002713 72.0
BYD3_k127_1608273_1 transferase hexapeptide repeat - - - 0.000000003717 58.0
BYD3_k127_1615858_0 Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000992 622.0
BYD3_k127_1615858_1 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 574.0
BYD3_k127_1615858_2 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 326.0
BYD3_k127_1615858_3 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000000000000000004021 176.0
BYD3_k127_1615858_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000004806 169.0
BYD3_k127_1615858_5 Cytochrome c K07243 - - 0.000000000000000000000008631 117.0
BYD3_k127_1637166_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000002828 202.0
BYD3_k127_1637166_1 NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000458 194.0
BYD3_k127_1637166_2 sequence-specific DNA binding - - - 0.0000000000000000000000000543 113.0
BYD3_k127_1637166_3 ATP hydrolysis coupled proton transport - - - 0.000000000000000000000007878 117.0
BYD3_k127_1637166_4 PFAM Uncharacterised BCR, COG1649 - - - 0.0000000000004662 79.0
BYD3_k127_1700719_0 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 1.305e-201 639.0
BYD3_k127_1700719_1 Asparaginyl-tRNA synthetase K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 587.0
BYD3_k127_1700719_10 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 292.0
BYD3_k127_1700719_11 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000009755 235.0
BYD3_k127_1700719_12 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000001025 239.0
BYD3_k127_1700719_13 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000859 223.0
BYD3_k127_1700719_14 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000005268 187.0
BYD3_k127_1700719_15 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000007124 181.0
BYD3_k127_1700719_16 2-hydroxyacid dehydrogenase K12972 - 1.1.1.79,1.1.1.81 0.00000000000000000000000000000000000000002133 173.0
BYD3_k127_1700719_17 PFAM Biopolymer transport protein ExbD TolR - - - 0.0000000000000000000000000000000000002957 146.0
BYD3_k127_1700719_18 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000003245 162.0
BYD3_k127_1700719_19 PFAM glycosyl transferase family 9 K02843 - - 0.00000000000000000000000000000001913 141.0
BYD3_k127_1700719_2 ABC transporter K02021,K06147,K06148,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 594.0
BYD3_k127_1700719_20 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000000000000000001346 126.0
BYD3_k127_1700719_21 - - - - 0.000000000000000000000001372 111.0
BYD3_k127_1700719_22 biopolymer transport protein - - - 0.00000000000000000000001987 105.0
BYD3_k127_1700719_23 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000001127 111.0
BYD3_k127_1700719_24 Tetratricopeptide repeat - - - 0.0000000000000000000001954 113.0
BYD3_k127_1700719_25 phosphate binding protein K02040 - - 0.0000000000000003252 89.0
BYD3_k127_1700719_26 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000006636 82.0
BYD3_k127_1700719_27 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000003871 80.0
BYD3_k127_1700719_28 peptidyl-tyrosine sulfation - - - 0.000000000164 72.0
BYD3_k127_1700719_29 STAS domain K04749 - - 0.0000000004959 65.0
BYD3_k127_1700719_3 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007241 576.0
BYD3_k127_1700719_30 biopolymer transport protein K03559 - - 0.00000001079 65.0
BYD3_k127_1700719_31 membrane K06142 - - 0.00000008066 61.0
BYD3_k127_1700719_32 Biopolymer transport protein ExbD/TolR - - - 0.00005288 55.0
BYD3_k127_1700719_33 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00006038 55.0
BYD3_k127_1700719_4 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 499.0
BYD3_k127_1700719_5 Surface antigen K07277 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 451.0
BYD3_k127_1700719_6 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02372,K02535,K13599,K16363 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0019171 3.5.1.108,4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 436.0
BYD3_k127_1700719_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05996,K07752 - 3.4.17.18,3.4.17.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 441.0
BYD3_k127_1700719_8 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007599 392.0
BYD3_k127_1700719_9 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 346.0
BYD3_k127_1715602_0 Natural resistance-associated macrophage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004841 543.0
BYD3_k127_1715602_1 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008533 409.0
BYD3_k127_1715602_2 Protein of unknown function (DUF3485) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 302.0
BYD3_k127_1715602_3 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.000000000000000000000000000000000000000000005914 166.0
BYD3_k127_1715602_4 OmpA family K02557 - - 0.0000000000000000000000000000000001025 144.0
BYD3_k127_1715602_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000007727 108.0
BYD3_k127_1723114_0 lysine biosynthetic process via aminoadipic acid - - - 1.948e-228 748.0
BYD3_k127_1723114_1 Oligoendopeptidase f - - - 5.214e-206 669.0
BYD3_k127_1723114_10 Sortase and related acyltransferases K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000000004718 225.0
BYD3_k127_1723114_11 Pregnancy-associated plasma protein-A - - - 0.000000000000000000000000000000000000000000000000000000003743 224.0
BYD3_k127_1723114_12 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000001222 194.0
BYD3_k127_1723114_13 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000008517 168.0
BYD3_k127_1723114_14 Acetyltransferase (GNAT) domain - - - 0.00000000000000001838 93.0
BYD3_k127_1723114_15 PFAM FecR protein - - - 0.0000000000009546 82.0
BYD3_k127_1723114_2 Bacterial protein of unknown function (DUF853) K06915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 509.0
BYD3_k127_1723114_3 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 381.0
BYD3_k127_1723114_4 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 308.0
BYD3_k127_1723114_5 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 310.0
BYD3_k127_1723114_6 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001516 294.0
BYD3_k127_1723114_7 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000004176 248.0
BYD3_k127_1723114_8 PFAM fumarate reductase succinate dehydrogenase flavoprotein K00239,K00278 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4,1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000001757 229.0
BYD3_k127_1723114_9 Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000000000000000000000000000000007577 248.0
BYD3_k127_1729665_0 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 360.0
BYD3_k127_1732480_0 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0004353 44.0
BYD3_k127_1780039_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 504.0
BYD3_k127_1780039_1 Fibronectin type 3 domain - - - 0.0001621 46.0
BYD3_k127_1789363_0 Fumarase C C-terminus - - - 2.456e-241 755.0
BYD3_k127_1789363_1 COG NOG10142 non supervised orthologous group - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008943 490.0
BYD3_k127_1789363_2 Belongs to the glutaminase family K01425 - 3.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005572 453.0
BYD3_k127_1789363_3 PFAM amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 421.0
BYD3_k127_1789363_4 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D K01424,K05597 GO:0003674,GO:0003824,GO:0004067,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006528,GO:0006530,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009066,GO:0009068,GO:0009987,GO:0016043,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0022607,GO:0030288,GO:0030313,GO:0031975,GO:0032787,GO:0034641,GO:0042597,GO:0042802,GO:0043436,GO:0043603,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:0072329,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.1,3.5.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 422.0
BYD3_k127_1789363_5 Tfp pilus assembly protein FimV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 406.0
BYD3_k127_1789363_6 PFAM Peptidoglycan-binding domain 1 protein K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 400.0
BYD3_k127_1789363_7 - K07221 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 362.0
BYD3_k127_1789363_8 Porin subfamily - - - 0.000000000000000000000000000000000000000000002255 186.0
BYD3_k127_185608_0 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 461.0
BYD3_k127_185608_1 Glucose-6-phosphate dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001718 255.0
BYD3_k127_185608_2 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000246 238.0
BYD3_k127_185608_3 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000002837 165.0
BYD3_k127_185608_4 Glucose-6-phosphate dehydrogenase subunit - - - 0.0000000000000000002538 102.0
BYD3_k127_185608_5 cAMP biosynthetic process - - - 0.0000000001872 66.0
BYD3_k127_189650_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 456.0
BYD3_k127_189650_1 membrane protein (DUF2254) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 394.0
BYD3_k127_1967115_0 Carbamoyl-phosphate synthetase ammonia chain K01955 GO:0000050,GO:0000166,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016053,GO:0016597,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071941,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 2.368e-204 664.0
BYD3_k127_1967115_1 Belongs to the CarA family K01956 GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005446 458.0
BYD3_k127_1967115_2 cAMP biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000589 363.0
BYD3_k127_1967115_3 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000001665 219.0
BYD3_k127_1967115_4 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000006248 214.0
BYD3_k127_1967115_5 AMP binding K06149 - - 0.000000000000000001912 91.0
BYD3_k127_1967115_6 Methyltransferase domain - - - 0.00000002396 65.0
BYD3_k127_1995406_0 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 336.0
BYD3_k127_1995406_1 Lipocalin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001709 252.0
BYD3_k127_1995406_2 endonuclease activity K07451 - - 0.000000000000000000000000000000000000000000000002578 190.0
BYD3_k127_1998996_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 396.0
BYD3_k127_1998996_1 efflux transmembrane transporter activity K15725 - - 0.000000000000000000000000000000000000000000000000000003487 207.0
BYD3_k127_1998996_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000586 113.0
BYD3_k127_1998996_3 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00003292 49.0
BYD3_k127_2003291_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03694,K03695 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 464.0
BYD3_k127_2003291_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 482.0
BYD3_k127_2003291_2 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005182 399.0
BYD3_k127_2003291_3 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000000000000000000000000315 128.0
BYD3_k127_2003291_4 VanZ like family - - - 0.000000000005243 72.0
BYD3_k127_2003291_5 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 0.0002952 53.0
BYD3_k127_2005168_0 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000002943 158.0
BYD3_k127_2005168_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.0000000000008411 79.0
BYD3_k127_2043275_0 Myo-inositol-1-phosphate synthase K01858 GO:0003674,GO:0003824,GO:0004512,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009405,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016853,GO:0016872,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044272,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 5.5.1.4 7.077e-197 620.0
BYD3_k127_2043275_1 Threonine aldolase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007639 302.0
BYD3_k127_2043275_10 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530,K05788 - - 0.0000000000000000000000000001357 119.0
BYD3_k127_2043275_11 YbbR-like protein - - - 0.0000000002552 70.0
BYD3_k127_2043275_12 PPIC-type PPIASE domain - - - 0.0001245 54.0
BYD3_k127_2043275_2 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) K02626 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000008897 254.0
BYD3_k127_2043275_3 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000004622 259.0
BYD3_k127_2043275_4 Putative neutral zinc metallopeptidase K06973 - - 0.0000000000000000000000000000000000000000000000000000000000000000001407 237.0
BYD3_k127_2043275_5 Metalloenzyme superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000003878 237.0
BYD3_k127_2043275_6 8-oxoguanine DNA glycosylase domain protein K03660 - 4.2.99.18 0.00000000000000000000000000000000000000000002217 173.0
BYD3_k127_2043275_7 NUDIX domain - - - 0.00000000000000000000000000000000002449 137.0
BYD3_k127_2043275_8 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.00000000000000000000000000000002037 139.0
BYD3_k127_2043275_9 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000008114 139.0
BYD3_k127_2083886_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 433.0
BYD3_k127_2083886_1 PAS domain containing protein K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007037 259.0
BYD3_k127_2083886_5 fimbriae expression regulatory protein pilR K02481,K02667 - - 0.000000003973 70.0
BYD3_k127_2088059_0 serine-type peptidase activity K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 434.0
BYD3_k127_2088059_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000392 209.0
BYD3_k127_2088059_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000008173 220.0
BYD3_k127_2088059_3 Carbohydrate phosphorylase K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000008342 192.0
BYD3_k127_2088059_4 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000000001067 177.0
BYD3_k127_2088059_5 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.0000000000000002102 94.0
BYD3_k127_2126914_0 phosphate K02040 GO:0003674,GO:0005488,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015698,GO:0042301,GO:0043167,GO:0043168,GO:0051179,GO:0051234 - 0.0000000000000000009604 97.0
BYD3_k127_2126914_1 Tetratricopeptide repeat - - - 0.0000000000226 78.0
BYD3_k127_2126914_2 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00003928 57.0
BYD3_k127_2276231_0 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 468.0
BYD3_k127_2276231_1 PFAM Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000141 250.0
BYD3_k127_2276231_2 nucleotide catabolic process - - - 0.00000000000000000000000000000000005341 148.0
BYD3_k127_2276231_3 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009889,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2001141 - 0.0000000000000000000000004099 107.0
BYD3_k127_2283538_0 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 418.0
BYD3_k127_2283538_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000002102 248.0
BYD3_k127_2283538_10 Outer membrane protein beta-barrel domain - - - 0.00002288 53.0
BYD3_k127_2283538_11 - - - - 0.00006465 48.0
BYD3_k127_2283538_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000001697 260.0
BYD3_k127_2283538_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000001123 232.0
BYD3_k127_2283538_4 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000007008 191.0
BYD3_k127_2283538_5 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000003992 158.0
BYD3_k127_2283538_6 peptidyl-tyrosine sulfation K13992 - - 0.00000000000000000000000000000000008246 143.0
BYD3_k127_2283538_7 - - - - 0.0000000000000000000000000000001251 138.0
BYD3_k127_2283538_8 Acylphosphatase K01512 - 3.6.1.7 0.0000000000007519 73.0
BYD3_k127_2283538_9 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000002263 65.0
BYD3_k127_2290300_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.683e-222 717.0
BYD3_k127_2290300_1 Endoribonuclease that initiates mRNA decay K18682 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 599.0
BYD3_k127_2290300_10 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000001765 259.0
BYD3_k127_2290300_11 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0000049,GO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032268,GO:0032270,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043254,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045727,GO:0045948,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065003,GO:0065007,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901193,GO:1901195,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:1904688,GO:1904690,GO:1990856,GO:1990904,GO:2000112,GO:2000765,GO:2000767 - 0.000000000000000000000000000000000000000000000000000002327 200.0
BYD3_k127_2290300_12 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000005713 203.0
BYD3_k127_2290300_13 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000002063 138.0
BYD3_k127_2290300_14 Acid phosphatase vanadium-dependent haloperoxidase related K09775 - - 0.00000000000000000000000000000471 134.0
BYD3_k127_2290300_15 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000001072 77.0
BYD3_k127_2290300_16 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000742 72.0
BYD3_k127_2290300_17 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000003136 61.0
BYD3_k127_2290300_2 Phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008262 544.0
BYD3_k127_2290300_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 454.0
BYD3_k127_2290300_4 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 374.0
BYD3_k127_2290300_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 356.0
BYD3_k127_2290300_6 YmdB-like protein K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 329.0
BYD3_k127_2290300_7 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004822 315.0
BYD3_k127_2290300_8 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001501 293.0
BYD3_k127_2290300_9 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000002297 255.0
BYD3_k127_2308891_0 Glycosyl hydrolases family 2, TIM barrel domain K01190 - 3.2.1.23 4.051e-258 808.0
BYD3_k127_2308891_1 protoporphyrinogen oxidase activity K01854,K07011 - 5.4.99.9 1.338e-222 722.0
BYD3_k127_2308891_10 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 293.0
BYD3_k127_2308891_11 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 306.0
BYD3_k127_2308891_12 FAD binding domain K00103,K00279 - 1.1.3.8,1.5.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003718 284.0
BYD3_k127_2308891_13 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002284 252.0
BYD3_k127_2308891_14 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000001797 263.0
BYD3_k127_2308891_15 Short-chain dehydrogenase reductase sdr - - - 0.000000000000000000000000000000000000000000000000000000000000000000002757 248.0
BYD3_k127_2308891_16 Putative adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000007003 239.0
BYD3_k127_2308891_17 stress-induced mitochondrial fusion - - - 0.000000000000000000000000000000000000000000000000000000000008635 217.0
BYD3_k127_2308891_18 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000000000000479 201.0
BYD3_k127_2308891_19 FR47-like protein - - - 0.000000000000000000000000000000000000000000002215 176.0
BYD3_k127_2308891_2 PFAM Pyridoxal-dependent decarboxylase K01593 - 4.1.1.105,4.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 553.0
BYD3_k127_2308891_20 dioxygenase of extradiol dioxygenase family K06991 - - 0.000000000000000000000000000000000000000000002529 170.0
BYD3_k127_2308891_21 sulfuric ester hydrolase activity K03760,K06349,K19353 GO:0008150,GO:0022603,GO:0042173,GO:0043937,GO:0043938,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0065007 2.7.8.43 0.00000000000000000000000000000000000000000001679 173.0
BYD3_k127_2308891_22 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000000000006783 168.0
BYD3_k127_2308891_23 Integral membrane protein (intg_mem_TP0381) - - - 0.00000000000000000000000000000000001473 150.0
BYD3_k127_2308891_24 Cytochrome c - - - 0.00000000000000000000000000000001883 141.0
BYD3_k127_2308891_25 - - - - 0.000000000000000000000000000007953 123.0
BYD3_k127_2308891_26 - - - - 0.00000000000000000000000001505 118.0
BYD3_k127_2308891_27 DNA excision K02806 - - 0.0000000000000005779 83.0
BYD3_k127_2308891_28 SCP-2 sterol transfer family - - - 0.00000000000001217 86.0
BYD3_k127_2308891_29 Putative adhesin - - - 0.00000000000002926 85.0
BYD3_k127_2308891_3 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 542.0
BYD3_k127_2308891_30 - - - - 0.00000000001109 74.0
BYD3_k127_2308891_31 DinB family - - - 0.00000001611 64.0
BYD3_k127_2308891_32 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.000008774 49.0
BYD3_k127_2308891_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 416.0
BYD3_k127_2308891_5 Galactose-1-phosphate uridyl transferase, C-terminal domain K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 438.0
BYD3_k127_2308891_6 6-phospho-beta-galactosidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009161 417.0
BYD3_k127_2308891_7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00303 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 384.0
BYD3_k127_2308891_8 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007533 368.0
BYD3_k127_2308891_9 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 306.0
BYD3_k127_2319671_0 ABC transporter transmembrane region K06147 - - 5.635e-195 625.0
BYD3_k127_2319671_1 Transglycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004152 634.0
BYD3_k127_2319671_10 Glycosyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004722 376.0
BYD3_k127_2319671_11 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008505 373.0
BYD3_k127_2319671_12 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008005 356.0
BYD3_k127_2319671_13 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005421 326.0
BYD3_k127_2319671_14 lipid kinase activity - - - 0.0000000000000000000000000000000000000000000000000000308 211.0
BYD3_k127_2319671_15 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000003464 184.0
BYD3_k127_2319671_16 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000002849 180.0
BYD3_k127_2319671_17 Low affinity iron permease - - - 0.0000000000000000000000000000000000000003012 156.0
BYD3_k127_2319671_18 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000003656 122.0
BYD3_k127_2319671_19 histidine kinase A domain protein - - - 0.000000000000000000000002771 110.0
BYD3_k127_2319671_2 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 500.0
BYD3_k127_2319671_20 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000000001284 98.0
BYD3_k127_2319671_21 PBS lyase HEAT-like repeat - - - 0.0000000001922 75.0
BYD3_k127_2319671_22 transcriptional regulator K10914 GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 - 0.00000003938 64.0
BYD3_k127_2319671_23 YtxH-like protein - - - 0.0000906 49.0
BYD3_k127_2319671_3 Polysaccharide biosynthesis protein K17947 - 5.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009087 477.0
BYD3_k127_2319671_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 469.0
BYD3_k127_2319671_5 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 432.0
BYD3_k127_2319671_6 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 409.0
BYD3_k127_2319671_7 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 407.0
BYD3_k127_2319671_8 Male sterility protein K12454 - 5.1.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 418.0
BYD3_k127_2319671_9 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 380.0
BYD3_k127_232180_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.238e-252 801.0
BYD3_k127_232180_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 2e-221 709.0
BYD3_k127_232180_10 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000002071 141.0
BYD3_k127_232180_11 Ribosomal_S15 K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000006909 126.0
BYD3_k127_232180_12 Protein of unknown function (DUF503) K09764 - - 0.000000000000000001765 88.0
BYD3_k127_232180_13 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000002817 86.0
BYD3_k127_232180_14 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000005254 95.0
BYD3_k127_232180_15 cellulose binding - - - 0.000000000000001226 91.0
BYD3_k127_232180_16 PFAM O-antigen polymerase K18814 - - 0.00000000000002202 87.0
BYD3_k127_232180_17 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000001018 84.0
BYD3_k127_232180_2 Belongs to the peptidase M16 family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 375.0
BYD3_k127_232180_3 peptidyl-lysine modification to peptidyl-hypusine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 302.0
BYD3_k127_232180_4 Participates in both transcription termination and antitermination K02600 GO:0001000,GO:0001121,GO:0001125,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002627 278.0
BYD3_k127_232180_5 DHH family K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000002601 244.0
BYD3_k127_232180_6 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000003424 210.0
BYD3_k127_232180_7 riboflavin biosynthesis protein K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000001801 210.0
BYD3_k127_232180_8 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000003093 192.0
BYD3_k127_232180_9 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.0000000000000000000000000000000000000005598 169.0
BYD3_k127_2340513_0 Dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 369.0
BYD3_k127_2340513_1 HNH nucleases - - - 0.0000000000000000000001286 106.0
BYD3_k127_2362093_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347,K03614 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 312.0
BYD3_k127_2362093_1 Part of a membrane complex involved in electron transport K03615 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004387 268.0
BYD3_k127_2379370_0 Peptidase, S8 S53 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001842 301.0
BYD3_k127_2379370_1 Belongs to the peptidase S8 family - - - 0.000000000000006066 89.0
BYD3_k127_2379370_2 - - - - 0.000000007245 63.0
BYD3_k127_2456070_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 465.0
BYD3_k127_2456070_1 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007054 401.0
BYD3_k127_2456070_10 Protein tyrosine kinase K12132 - 2.7.11.1 0.00007346 55.0
BYD3_k127_2456070_2 amino acid activation for nonribosomal peptide biosynthetic process K05996 - 3.4.17.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 379.0
BYD3_k127_2456070_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008935 257.0
BYD3_k127_2456070_4 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000004391 221.0
BYD3_k127_2456070_5 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000004019 178.0
BYD3_k127_2456070_6 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000002599 155.0
BYD3_k127_2456070_7 TPR repeat - - - 0.0000000000000000000000000000000000001155 158.0
BYD3_k127_2456070_9 PFAM Phytase K01083,K01113,K01126 - 3.1.3.1,3.1.3.8,3.1.4.46 0.000000000000000000000026 113.0
BYD3_k127_2517633_0 Domain of Unknown Function (DUF748) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 441.0
BYD3_k127_2597965_0 Peptidase family S58 K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000006133 212.0
BYD3_k127_2597965_1 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000000000000000000005122 201.0
BYD3_k127_2615533_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050497,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007587 486.0
BYD3_k127_2615533_1 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000000000272 194.0
BYD3_k127_2615533_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000001007 108.0
BYD3_k127_2618888_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 501.0
BYD3_k127_2618888_1 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17105 - 2.5.1.42 0.000000000000000006378 99.0
BYD3_k127_2628857_0 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 335.0
BYD3_k127_2628857_1 - - - - 0.0000000000000003432 87.0
BYD3_k127_2628857_2 Methyltransferase domain - - - 0.0007293 49.0
BYD3_k127_2642746_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 5.941e-281 876.0
BYD3_k127_2642746_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000007336 273.0
BYD3_k127_2642746_2 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.000000000000000000000000000000000000000000000005033 187.0
BYD3_k127_2642746_3 Protein of unknown function (DUF721) - - - 0.0000485 55.0
BYD3_k127_2643293_0 heme binding K08642,K21472 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001775 269.0
BYD3_k127_2643293_1 Serine aminopeptidase, S33 K03928 - 3.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000003664 240.0
BYD3_k127_2643293_2 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.000000000005393 76.0
BYD3_k127_2644348_0 Tricorn protease PDZ domain K08676 - - 4.745e-196 653.0
BYD3_k127_2644348_1 - - - - 0.00000000000000000000000000000000000000000002086 174.0
BYD3_k127_2644348_2 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000007241 143.0
BYD3_k127_2687915_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 1.921e-298 936.0
BYD3_k127_2687915_1 ABC transporter - - - 2.884e-202 645.0
BYD3_k127_2687915_10 COG2143 Thioredoxin-related protein - - - 0.000000000000000000000001904 109.0
BYD3_k127_2687915_11 Acetokinase family K00925 - 2.7.2.1 0.0000000000000008331 78.0
BYD3_k127_2687915_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005847 392.0
BYD3_k127_2687915_3 Protein of unknown function (DUF3798) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 365.0
BYD3_k127_2687915_4 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005031 355.0
BYD3_k127_2687915_5 Acetokinase family K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000009247 248.0
BYD3_k127_2687915_6 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.00000000000000000000000000000000000000000000000006766 198.0
BYD3_k127_2687915_7 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000002297 170.0
BYD3_k127_2687915_8 nitrite transmembrane transporter activity K02575,K05373,K08218 - - 0.00000000000000000000000000000000000000004742 166.0
BYD3_k127_2687915_9 HAD-superfamily hydrolase, subfamily IIA K01507 - 3.6.1.1 0.0000000000000000000000000000000000003739 149.0
BYD3_k127_2749139_0 regulation of DNA-templated transcription, elongation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 509.0
BYD3_k127_2749139_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 412.0
BYD3_k127_2749139_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 343.0
BYD3_k127_2749139_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008751 344.0
BYD3_k127_2749139_4 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003294 279.0
BYD3_k127_2749139_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000005917 214.0
BYD3_k127_2749139_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000005666 102.0
BYD3_k127_2749139_7 lactoylglutathione lyase activity - - - 0.000000000000000001308 100.0
BYD3_k127_2749139_8 Tetratricopeptide repeats - - - 0.000377 53.0
BYD3_k127_2774017_0 N,N-dimethylaniline monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000407 230.0
BYD3_k127_2774017_1 - - - - 0.00000000000000000000000000000000000000000000000000000423 194.0
BYD3_k127_2774017_2 methyltransferase - - - 0.0000000000000000000000000000000000000000000000008939 178.0
BYD3_k127_2774017_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000002555 179.0
BYD3_k127_2774017_4 DinB family - - - 0.000000000000000000000000000000000004258 153.0
BYD3_k127_2774017_5 peptidoglycan turnover - - - 0.00000000000000000000000006114 123.0
BYD3_k127_2774017_6 - - - - 0.0004768 49.0
BYD3_k127_2789913_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 410.0
BYD3_k127_2789913_1 COG4257 Streptogramin lyase - - - 0.0000000000000000000000001399 113.0
BYD3_k127_2844416_0 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004496 267.0
BYD3_k127_2844416_1 Preprotein translocase SecG subunit K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000001262 81.0
BYD3_k127_2844416_2 methyltransferase K03183,K15256 - 2.1.1.163,2.1.1.201 0.000000000006956 76.0
BYD3_k127_2844416_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803,K21910 - 5.3.1.1,5.3.1.33 0.00000006636 55.0
BYD3_k127_2844416_4 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.0000002692 53.0
BYD3_k127_2863305_0 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 321.0
BYD3_k127_2863305_1 maltose binding K02027,K17329 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 312.0
BYD3_k127_2863305_2 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000001348 257.0
BYD3_k127_2863305_3 binding-protein-dependent transport systems inner membrane component K02025,K15771 - - 0.00000000000000000000000000000000000000000000000000000000006326 229.0
BYD3_k127_2863305_4 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000000000107 221.0
BYD3_k127_2863305_5 Binding-protein-dependent transport system inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000007156 191.0
BYD3_k127_2863305_6 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000004389 122.0
BYD3_k127_2863305_8 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00001434 55.0
BYD3_k127_2870344_0 cellulase activity K20276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 613.0
BYD3_k127_2870344_1 cellulase activity K20276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 569.0
BYD3_k127_2870344_10 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 293.0
BYD3_k127_2870344_11 PFAM type II secretion system K02653,K12278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000172 288.0
BYD3_k127_2870344_12 amine dehydrogenase activity K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000001916 265.0
BYD3_k127_2870344_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001372 252.0
BYD3_k127_2870344_14 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000007101 201.0
BYD3_k127_2870344_15 TonB dependent receptor K02014,K16092 - - 0.0000000000000000000000000000000000000000000000000000002614 218.0
BYD3_k127_2870344_16 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000001038 209.0
BYD3_k127_2870344_17 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.0000000000000000000000000000000815 135.0
BYD3_k127_2870344_18 Response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000000000000000006151 130.0
BYD3_k127_2870344_19 pilus assembly protein K02662 - - 0.000000000000000000000000002868 129.0
BYD3_k127_2870344_2 Type II IV secretion system protein K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 502.0
BYD3_k127_2870344_20 Transmembrane protein 260 - - - 0.00000000000000000000000007411 124.0
BYD3_k127_2870344_21 Cellulase (glycosyl hydrolase family 5) - - - 0.00000000000000002208 98.0
BYD3_k127_2870344_22 domain, Protein - - - 0.0000000000000001118 96.0
BYD3_k127_2870344_23 nucleotidyltransferase activity - - - 0.000000000000002676 85.0
BYD3_k127_2870344_24 Prokaryotic N-terminal methylation motif - - - 0.0000000000001874 76.0
BYD3_k127_2870344_25 peptidase activity, acting on L-amino acid peptides K07752 - 3.4.17.22 0.00000000001988 79.0
BYD3_k127_2870344_26 - - - - 0.0000000009741 73.0
BYD3_k127_2870344_27 Prokaryotic N-terminal methylation motif K02457 - - 0.0000001001 66.0
BYD3_k127_2870344_3 cystathionine gamma-synthase activity K01739,K01758,K01760,K01761 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004121,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009698 473.0
BYD3_k127_2870344_4 Domain in cystathionine beta-synthase and other proteins. K01697 - 4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 473.0
BYD3_k127_2870344_5 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0040007,GO:0044424,GO:0044464,GO:0055114 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 456.0
BYD3_k127_2870344_6 Belongs to the thiolase family K00626,K07508 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009204 454.0
BYD3_k127_2870344_7 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 463.0
BYD3_k127_2870344_8 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 404.0
BYD3_k127_2870344_9 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 369.0
BYD3_k127_2878389_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 361.0
BYD3_k127_2878389_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 297.0
BYD3_k127_2878389_10 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000003301 159.0
BYD3_k127_2878389_11 Ribosomal protein S9/S16 K02996 - - 0.000000000000000000000000000000000157 136.0
BYD3_k127_2878389_12 PFAM glycosyl transferase family 9 K02843,K02849 - - 0.000000000000000000000000000000001109 143.0
BYD3_k127_2878389_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006649 271.0
BYD3_k127_2878389_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000001393 263.0
BYD3_k127_2878389_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000007359 253.0
BYD3_k127_2878389_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0030312,GO:0032984,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000001607 226.0
BYD3_k127_2878389_6 Bifunctional protein - - - 0.00000000000000000000000000000000000000000000000000000000001966 231.0
BYD3_k127_2878389_7 mRNA binding K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0070180,GO:0071704,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000000000000000000278 179.0
BYD3_k127_2878389_8 phosphatidate cytidylyltransferase activity K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000008733 181.0
BYD3_k127_2878389_9 Glycosyltransferase family 9 (heptosyltransferase) K02841,K02843,K02849 - - 0.0000000000000000000000000000000000000000000007022 183.0
BYD3_k127_2893939_0 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000002266 258.0
BYD3_k127_2893939_1 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000003681 160.0
BYD3_k127_2893939_2 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000217 158.0
BYD3_k127_2928564_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K03918 - 2.6.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003992 536.0
BYD3_k127_2928564_1 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000003378 152.0
BYD3_k127_2939949_0 Dehydrogenase E1 component K11381 - 1.2.4.4 8.437e-274 859.0
BYD3_k127_2939949_1 Peptidase family M1 domain K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 527.0
BYD3_k127_2939949_10 Homocysteine S-methyltransferase K00547,K21169 - 2.1.1.10 0.00000000000000000000000000000000000000000000000000294 206.0
BYD3_k127_2939949_11 Family of unknown function (DUF1028) - - - 0.000000000000000000000000000000000000000000000000007902 205.0
BYD3_k127_2939949_12 - K07018 - - 0.000000000000000000000000000000000000002431 157.0
BYD3_k127_2939949_13 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000117 154.0
BYD3_k127_2939949_14 Putative outer membrane beta-barrel porin, MtrB/PioB K22110 - - 0.0000000000000000000000000000000000003851 161.0
BYD3_k127_2939949_15 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000002625 148.0
BYD3_k127_2939949_16 Predicted permease K07089 - - 0.000000000000000000000000001227 125.0
BYD3_k127_2939949_2 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 510.0
BYD3_k127_2939949_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007215 347.0
BYD3_k127_2939949_4 Uncharacterized protein conserved in bacteria (DUF2330) K00347,K21163 GO:0000166,GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008137,GO:0008144,GO:0008150,GO:0008152,GO:0010181,GO:0015672,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0019842,GO:0030001,GO:0030964,GO:0032553,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0044425,GO:0044464,GO:0048037,GO:0050136,GO:0050662,GO:0051179,GO:0051234,GO:0055114,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:1901265,GO:1901363,GO:1902444,GO:1902494 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008133 312.0
BYD3_k127_2939949_5 Uncharacterized protein conserved in bacteria (DUF2330) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004324 283.0
BYD3_k127_2939949_6 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001387 272.0
BYD3_k127_2939949_7 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002238 247.0
BYD3_k127_2939949_8 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000004256 239.0
BYD3_k127_2939949_9 Family of unknown function (DUF1028) - - - 0.00000000000000000000000000000000000000000000000000000000001939 219.0
BYD3_k127_2942012_0 PAS fold - - - 0.000000000000000000000000003039 127.0
BYD3_k127_2988750_0 AAA ATPase K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000435 460.0
BYD3_k127_2988750_1 activity, protein serine threonine kinase activity, protein-tyrosine kinase activity, ATP binding, regulation of transcription, DNA-dependent, protein amino acid phosphorylation K08282,K13419 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 311.0
BYD3_k127_2988750_10 Putative adhesin - - - 0.0000000001883 72.0
BYD3_k127_2988750_11 protein secretion K09800 - - 0.000000002275 72.0
BYD3_k127_2988750_12 Sigma-70, region 4 - - - 0.000000392 59.0
BYD3_k127_2988750_13 Thioredoxin-like - - - 0.000001727 58.0
BYD3_k127_2988750_14 protein-disulfide reductase activity K01829,K04084 - 1.8.1.8,5.3.4.1 0.00005725 48.0
BYD3_k127_2988750_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 299.0
BYD3_k127_2988750_3 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000072 254.0
BYD3_k127_2988750_4 Alpha-tubulin suppressor and related RCC1 domain-containing proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000005704 254.0
BYD3_k127_2988750_5 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000001118 245.0
BYD3_k127_2988750_6 PFAM GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000000007464 165.0
BYD3_k127_2988750_7 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000222 144.0
BYD3_k127_2988750_8 - - - - 0.000000000000000000005754 107.0
BYD3_k127_2988750_9 PFAM Uncharacterised protein family (UPF0153) - - - 0.00000000000000004171 91.0
BYD3_k127_3007912_0 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244 - 1.4.1.1,4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 339.0
BYD3_k127_3007912_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004562 289.0
BYD3_k127_3007912_2 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000006012 224.0
BYD3_k127_3008112_0 Protein of unknown function (DUF3494) - - - 5.414e-274 906.0
BYD3_k127_3008112_1 Urocanase C-terminal domain K01712 - 4.2.1.49 1.243e-258 809.0
BYD3_k127_3008112_10 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000006112 267.0
BYD3_k127_3008112_11 PFAM PHP domain K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000001568 228.0
BYD3_k127_3008112_12 Tetratricopeptide repeat - - - 0.0000000000000000000000000007788 130.0
BYD3_k127_3008112_13 Prokaryotic N-terminal methylation motif K02456,K02650 - - 0.00000000000001992 75.0
BYD3_k127_3008112_14 Protein of unknown function (DUF3494) - - - 0.00000000000004855 88.0
BYD3_k127_3008112_15 Tetratricopeptide repeats - - - 0.0000000000009459 81.0
BYD3_k127_3008112_16 photosystem II stabilization K02237 - - 0.0000000000009492 74.0
BYD3_k127_3008112_17 Pfam:N_methyl_2 K02456 - - 0.000000003367 69.0
BYD3_k127_3008112_18 - - - - 0.0000000284 64.0
BYD3_k127_3008112_2 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02504,K02652 - - 8.493e-196 627.0
BYD3_k127_3008112_3 Formiminotransferase-cyclodeaminase K00603,K01746,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 504.0
BYD3_k127_3008112_4 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 451.0
BYD3_k127_3008112_5 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004131 436.0
BYD3_k127_3008112_6 Two component, sigma54 specific, transcriptional regulator, Fis family K02667,K07713,K07714,K19641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 438.0
BYD3_k127_3008112_7 Histidine ammonia-lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 467.0
BYD3_k127_3008112_8 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 376.0
BYD3_k127_3008112_9 helicase involved in DNA repair and perhaps also replication K03722 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 312.0
BYD3_k127_3016579_0 ATP:ADP antiporter activity K01932,K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 396.0
BYD3_k127_3016579_1 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005124 258.0
BYD3_k127_3016579_2 PFAM Na-Ca exchanger integrin-beta4 peptidase-like FG-GAP K20276 - - 0.0000000000000000000000000000000000000000000002275 192.0
BYD3_k127_3016579_3 cellulose binding K00505 - 1.14.18.1 0.0000001746 65.0
BYD3_k127_3016579_4 Glyco_18 - - - 0.000004788 60.0
BYD3_k127_3021422_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 2.773e-196 643.0
BYD3_k127_3021422_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 556.0
BYD3_k127_3021422_10 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 319.0
BYD3_k127_3021422_11 Glycosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 302.0
BYD3_k127_3021422_12 NAD-dependent epimerase dehydratase K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000002023 270.0
BYD3_k127_3021422_13 alginic acid biosynthetic process K01729 - 4.2.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000001491 257.0
BYD3_k127_3021422_14 Domain of unknown function (DUF4185) - - - 0.00000000000000000000000000000000000000000000000000000000000000005669 241.0
BYD3_k127_3021422_15 GAF domain - - - 0.00000000000000000000000000000000000000000000000000001396 204.0
BYD3_k127_3021422_16 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000001789 187.0
BYD3_k127_3021422_17 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000003684 134.0
BYD3_k127_3021422_18 Capsular exopolysaccharide family - - - 0.000000000000000000000000007679 128.0
BYD3_k127_3021422_19 membrane-bound metal-dependent K07038 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000001248 102.0
BYD3_k127_3021422_2 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 532.0
BYD3_k127_3021422_20 polysaccharide export protein K01991 - - 0.00000000000000008693 93.0
BYD3_k127_3021422_21 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000003114 90.0
BYD3_k127_3021422_22 Dolichol kinase K18678 GO:0003674,GO:0003824,GO:0006066,GO:0006629,GO:0006720,GO:0006721,GO:0006766,GO:0006775,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009987,GO:0010189,GO:0010276,GO:0016101,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017144,GO:0018130,GO:0033306,GO:0034308,GO:0042360,GO:0042362,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1903173 2.7.1.182 0.0000000000001163 79.0
BYD3_k127_3021422_23 PFAM Integral membrane protein DUF92 - GO:0005575,GO:0016020 - 0.000000000001993 77.0
BYD3_k127_3021422_24 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01485,K11991 GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 3.5.4.1,3.5.4.33 0.00001142 51.0
BYD3_k127_3021422_25 PFAM lipopolysaccharide biosynthesis - - - 0.0003788 54.0
BYD3_k127_3021422_3 PFAM asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007361 519.0
BYD3_k127_3021422_4 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 454.0
BYD3_k127_3021422_5 carbamoyl transferase, NodU family K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 437.0
BYD3_k127_3021422_6 Polysaccharide biosynthesis protein K01784,K02473 - 5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 328.0
BYD3_k127_3021422_7 Glycosyltransferase Family 4 K13668 - 2.4.1.346 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 329.0
BYD3_k127_3021422_8 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 315.0
BYD3_k127_3021422_9 TIGRFAM FemAB-related protein, PEP-CTERM system-associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009732 311.0
BYD3_k127_3047374_0 Tricorn protease C1 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 297.0
BYD3_k127_3047374_1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000003485 240.0
BYD3_k127_3047374_2 Protein of unknown function (DUF1579) - - - 0.0000000000000000000000009091 115.0
BYD3_k127_3063835_0 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 462.0
BYD3_k127_3063835_1 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 466.0
BYD3_k127_3063835_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 488.0
BYD3_k127_3063835_3 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000003714 173.0
BYD3_k127_3063835_4 Helix-turn-helix domain protein - - - 0.0000000000000000006569 97.0
BYD3_k127_3063835_5 ubiE/COQ5 methyltransferase family - - - 0.000001449 50.0
BYD3_k127_3063835_6 transcriptional regulator, SARP family - - - 0.00001496 57.0
BYD3_k127_3078464_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 403.0
BYD3_k127_3078464_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000005716 170.0
BYD3_k127_3117232_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 478.0
BYD3_k127_3117232_1 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.000000000000000000000000000000000000000000000000000000002351 209.0
BYD3_k127_3117232_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000002995 199.0
BYD3_k127_3117232_3 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000003573 136.0
BYD3_k127_3124653_0 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007783 467.0
BYD3_k127_3124653_1 PFAM phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 430.0
BYD3_k127_3124653_2 copper resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 376.0
BYD3_k127_3124653_3 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000003373 205.0
BYD3_k127_3124653_4 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000001398 189.0
BYD3_k127_3124653_5 COG1858 Cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000002967 125.0
BYD3_k127_3124653_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000001606 126.0
BYD3_k127_3124653_7 methyltransferase - - - 0.0000002374 58.0
BYD3_k127_3124653_8 Peptidase family C25 - - - 0.0002536 51.0
BYD3_k127_3222926_0 Peptidase family M3 K01392 - 3.4.24.15 1.314e-195 641.0
BYD3_k127_3222926_1 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000001665 162.0
BYD3_k127_3222926_2 protease with the C-terminal PDZ domain - - - 0.0000000000005787 73.0
BYD3_k127_3228538_0 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000000000000000000000000000000000000004592 198.0
BYD3_k127_3228538_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000006447 209.0
BYD3_k127_3228538_2 - - - - 0.000000000000000000000000000000000000000004153 162.0
BYD3_k127_3228538_3 Response regulator receiver domain - - - 0.000000000000000000000000000000007472 146.0
BYD3_k127_3228538_4 - - - - 0.000000000000000000000000003116 115.0
BYD3_k127_3228538_5 PFAM protein phosphatase 2C domain protein, response regulator receiver K07315 - 3.1.3.3 0.0000000000000000000000003637 115.0
BYD3_k127_3283632_0 Prolyl oligopeptidase family - - - 2.777e-219 698.0
BYD3_k127_3283632_1 peptidoglycan-binding protein, lysm - - - 0.000000000000000000814 91.0
BYD3_k127_3299244_0 UvrD/REP helicase N-terminal domain - - - 0.0 1089.0
BYD3_k127_3299244_1 PD-(D/E)XK nuclease superfamily - - - 1.611e-286 932.0
BYD3_k127_3299244_10 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000775 226.0
BYD3_k127_3299244_11 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000001052 204.0
BYD3_k127_3299244_12 Belongs to the peptidase S8 family K14645 - - 0.00000000000000000000000000000000000000000000000003386 203.0
BYD3_k127_3299244_13 Transcription factor zinc-finger - - - 0.0000000000000000000000000000000002241 151.0
BYD3_k127_3299244_14 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.00000000000000000000001242 102.0
BYD3_k127_3299244_2 Oxidoreductase - - - 1.398e-222 717.0
BYD3_k127_3299244_3 Glycine cleavage T-protein C-terminal barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 470.0
BYD3_k127_3299244_4 virion core protein (lumpy skin disease virus) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008144 436.0
BYD3_k127_3299244_5 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008538 475.0
BYD3_k127_3299244_6 Surface antigen variable number K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 449.0
BYD3_k127_3299244_7 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006664 410.0
BYD3_k127_3299244_8 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008248 295.0
BYD3_k127_3299244_9 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007187 307.0
BYD3_k127_3323968_0 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 422.0
BYD3_k127_3323968_1 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 407.0
BYD3_k127_3323968_2 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K15876 - - 0.00000000000000000000000000000000000000000000000000000000000001422 219.0
BYD3_k127_3323968_3 Isochorismate synthase K02552 - 5.4.4.2 0.0000000000000000000000000000000000000000000000000000003261 218.0
BYD3_k127_3323968_4 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.0000000000000000000000000000003908 142.0
BYD3_k127_3383_0 CobW/HypB/UreG, nucleotide-binding domain - - - 2.486e-194 619.0
BYD3_k127_3383_1 Domains REC, sigma54 interaction, HTH8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 439.0
BYD3_k127_3383_10 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000001211 276.0
BYD3_k127_3383_11 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000004312 282.0
BYD3_k127_3383_12 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000007494 235.0
BYD3_k127_3383_13 PFAM Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000002164 228.0
BYD3_k127_3383_14 Tryptophan synthase alpha chain K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000007495 216.0
BYD3_k127_3383_15 PFAM ATP-binding region ATPase domain protein K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000005137 198.0
BYD3_k127_3383_16 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000002105 186.0
BYD3_k127_3383_17 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000001895 177.0
BYD3_k127_3383_18 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.00000000000000000000000000000000003787 147.0
BYD3_k127_3383_19 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000003143 145.0
BYD3_k127_3383_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 409.0
BYD3_k127_3383_20 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000004209 110.0
BYD3_k127_3383_21 Ribosomal L32p protein family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.000000000000000000001638 95.0
BYD3_k127_3383_22 Uncharacterized ACR, COG1399 K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000009523 91.0
BYD3_k127_3383_23 Preprotein translocase subunit YajC K03210 - - 0.00000000000000001063 86.0
BYD3_k127_3383_24 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.000000000000001464 85.0
BYD3_k127_3383_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004393 395.0
BYD3_k127_3383_4 Endonuclease Exonuclease Phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 359.0
BYD3_k127_3383_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 371.0
BYD3_k127_3383_6 Queuine tRNA-ribosyltransferase K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 350.0
BYD3_k127_3383_7 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 336.0
BYD3_k127_3383_8 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 321.0
BYD3_k127_3383_9 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000985 326.0
BYD3_k127_3389760_0 transmembrane transporter activity - - - 2.451e-313 997.0
BYD3_k127_3389760_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.0000000000000000000000000000000000000000000008596 172.0
BYD3_k127_3389760_2 Protein of unknown function (DUF2892) - - - 0.00000000000000000000005791 99.0
BYD3_k127_3389760_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000003112 104.0
BYD3_k127_3389760_4 Outer membrane efflux protein - - - 0.000000000000000117 94.0
BYD3_k127_3389760_5 Putative zinc-finger K03088 - - 0.000000000000001152 85.0
BYD3_k127_3389760_6 unfolded protein binding - - - 0.0002279 49.0
BYD3_k127_3395473_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 302.0
BYD3_k127_3395473_1 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000001843 211.0
BYD3_k127_3395473_2 PFAM YicC-like family, N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000779 206.0
BYD3_k127_3395473_3 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000000000001331 184.0
BYD3_k127_3395473_4 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.0000000000000000000000000000000000000000009919 175.0
BYD3_k127_3395473_5 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000001211 130.0
BYD3_k127_3395473_6 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000002178 109.0
BYD3_k127_3395473_7 Glyoxalase-like domain - - - 0.000000005469 70.0
BYD3_k127_3400609_0 transcriptional regulator K12266 GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001130,GO:0001150,GO:0001151,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005506,GO:0005515,GO:0006355,GO:0008150,GO:0008198,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0035326,GO:0042802,GO:0043167,GO:0043169,GO:0043254,GO:0043565,GO:0044087,GO:0044089,GO:0044212,GO:0045893,GO:0045935,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070026,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000734 273.0
BYD3_k127_3400609_1 Carbon-nitrogen hydrolase K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007753 279.0
BYD3_k127_3400609_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001918 269.0
BYD3_k127_3445081_0 PglZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 569.0
BYD3_k127_3445081_1 Fumarase C C-terminus K01744 - 4.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 516.0
BYD3_k127_3445081_10 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 330.0
BYD3_k127_3445081_11 Integral membrane sensor signal transduction histidine kinase K07709,K13924 - 2.1.1.80,2.7.13.3,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004805 313.0
BYD3_k127_3445081_12 Multidrug transporter K08161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006409 307.0
BYD3_k127_3445081_13 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 295.0
BYD3_k127_3445081_14 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001046 248.0
BYD3_k127_3445081_15 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000005104 211.0
BYD3_k127_3445081_16 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000001753 205.0
BYD3_k127_3445081_17 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000006038 167.0
BYD3_k127_3445081_18 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000004478 156.0
BYD3_k127_3445081_19 protein family UPF0079, ATPase K06925 - - 0.00000000000000000000000000000852 124.0
BYD3_k127_3445081_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007237 490.0
BYD3_k127_3445081_20 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000008377 113.0
BYD3_k127_3445081_21 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.00000000000000000000000006279 121.0
BYD3_k127_3445081_22 PFAM Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000002316 94.0
BYD3_k127_3445081_23 Glycoprotease family K14742 - - 0.000000000000000005172 94.0
BYD3_k127_3445081_24 Involved in initiation control of chromosome replication K07484 - - 0.0000005034 63.0
BYD3_k127_3445081_3 Transketolase, pyrimidine binding domain K00162,K00167,K21417 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944,GO:0140030,GO:0140032 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 435.0
BYD3_k127_3445081_4 e3 binding domain K00658,K09699 GO:0003674,GO:0003824,GO:0004149,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008289,GO:0009060,GO:0009987,GO:0015980,GO:0016417,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016751,GO:0016999,GO:0017144,GO:0019752,GO:0031405,GO:0031406,GO:0032991,GO:0033293,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045333,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:0140096,GO:1901363,GO:1901681,GO:1902494,GO:1990204,GO:1990234 2.3.1.168,2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 428.0
BYD3_k127_3445081_5 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003871,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0030312,GO:0032259,GO:0034641,GO:0035999,GO:0036211,GO:0040007,GO:0042084,GO:0042085,GO:0042558,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0050667,GO:0051186,GO:0071704,GO:0071944,GO:0140096,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 414.0
BYD3_k127_3445081_6 Dehydrogenase E1 component K00161,K00166,K11381,K21416 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009671 396.0
BYD3_k127_3445081_7 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 387.0
BYD3_k127_3445081_8 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009754 358.0
BYD3_k127_3445081_9 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 GO:0001676,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0003824,GO:0003989,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006417,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0017148,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032787,GO:0032991,GO:0034248,GO:0034249,GO:0042759,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:0097159,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:2000112,GO:2000113 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 343.0
BYD3_k127_3463121_0 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000002352 119.0
BYD3_k127_3552161_0 PFAM Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 8.038e-224 722.0
BYD3_k127_3552161_1 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 2.54e-209 662.0
BYD3_k127_3552161_10 Integrin alpha (beta-propellor repeats). - - - 0.0000000000000000000000000000000000000000000008008 186.0
BYD3_k127_3552161_2 glyoxalase bleomycin resistance protein dioxygenase K15975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 428.0
BYD3_k127_3552161_3 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 385.0
BYD3_k127_3552161_4 RsbT co-antagonist protein rsbRD N-terminal domain K17763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 338.0
BYD3_k127_3552161_5 Stage II sporulation protein E - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001673 279.0
BYD3_k127_3552161_6 Phospholipase Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000003075 226.0
BYD3_k127_3552161_7 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K17752 - 2.7.11.1 0.00000000000000000000000000000000000000000000000004171 181.0
BYD3_k127_3552161_8 transporter antisigma-factor antagonist STAS K17762 - - 0.000000000000000000000000000000000000000000000001752 176.0
BYD3_k127_3552161_9 creatininase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000001102 183.0
BYD3_k127_3613621_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 3.858e-201 651.0
BYD3_k127_3613621_1 PFAM Sulfatase K01130 - 3.1.6.1 0.00000000000000000000000000000000000000000000000000000000000000004043 229.0
BYD3_k127_3636715_0 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 473.0
BYD3_k127_3636715_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000003169 69.0
BYD3_k127_3668995_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 6.334e-223 704.0
BYD3_k127_3668995_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 528.0
BYD3_k127_3668995_2 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000569 438.0
BYD3_k127_3668995_3 Coenzyme A transferase K01028 - 2.8.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 347.0
BYD3_k127_3668995_4 ArgK protein K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001577 258.0
BYD3_k127_3668995_5 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000004948 218.0
BYD3_k127_3668995_6 B12 binding domain K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000005342 192.0
BYD3_k127_3668995_7 PFAM ATP corrinoid adenosyltransferase BtuR CobO CobP K19221 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000005481 192.0
BYD3_k127_3676953_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 579.0
BYD3_k127_3676953_1 Adenylosuccinate lyase C-terminus K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 494.0
BYD3_k127_3676953_2 PDZ domain (Also known as DHR K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000004217 274.0
BYD3_k127_3676953_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000004164 190.0
BYD3_k127_3676953_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000007836 183.0
BYD3_k127_3676953_5 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000001567 160.0
BYD3_k127_3676953_6 cobalt transport K16785 - - 0.00006543 49.0
BYD3_k127_3695922_0 PFAM Peptidase family M20 M25 M40 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005223 369.0
BYD3_k127_3695922_1 Domain of unknown function(DUF2779) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006146 280.0
BYD3_k127_3695922_2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.0000000002409 74.0
BYD3_k127_3706293_0 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 379.0
BYD3_k127_3706293_1 O-antigen ligase like membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005361 333.0
BYD3_k127_3706293_10 Bacterial Ig-like domain (group 1) - - - 0.0000000002504 70.0
BYD3_k127_3706293_11 Kelch motif - - - 0.0000000004194 74.0
BYD3_k127_3706293_12 TPR repeat - - - 0.00005475 52.0
BYD3_k127_3706293_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000001407 218.0
BYD3_k127_3706293_3 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000006264 177.0
BYD3_k127_3706293_4 ATP-grasp - - - 0.00000000000000000000000000000000000000001774 175.0
BYD3_k127_3706293_5 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000001321 155.0
BYD3_k127_3706293_6 Protein involved in cellulose biosynthesis - - - 0.000000000000000000000000000000000002744 160.0
BYD3_k127_3706293_7 Protein involved in cellulose biosynthesis - - - 0.00000000000000000000000005661 126.0
BYD3_k127_3706293_8 Polysaccharide biosynthesis protein K03328,K16695 - - 0.00000000000000000000005282 115.0
BYD3_k127_3706293_9 - - - - 0.000000000000000000008561 106.0
BYD3_k127_3715383_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 500.0
BYD3_k127_3715383_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004986 376.0
BYD3_k127_3715383_10 - - - - 0.0003797 46.0
BYD3_k127_3715383_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 363.0
BYD3_k127_3715383_3 FeS-containing Cyanobacterial-specific oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 362.0
BYD3_k127_3715383_4 Metallopeptidase family M24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007163 321.0
BYD3_k127_3715383_5 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 321.0
BYD3_k127_3715383_6 SpoIVB peptidase S55 K00973,K02414,K21449 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000001555 273.0
BYD3_k127_3715383_7 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000002861 230.0
BYD3_k127_3715383_8 diguanylate cyclase - - - 0.000000000005118 80.0
BYD3_k127_3715383_9 diguanylate cyclase - - - 0.000006444 60.0
BYD3_k127_3785257_0 COG2513 PEP phosphonomutase and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 317.0
BYD3_k127_3785257_1 Putative adhesin - - - 0.0000000000000000000000000000000000004548 148.0
BYD3_k127_3785257_2 COG0346 Lactoylglutathione lyase and related lyases - - - 0.0000000000000000000000004179 108.0
BYD3_k127_3803869_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 3.956e-204 660.0
BYD3_k127_3803869_1 Domain of unknown function (DUF4185) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002582 264.0
BYD3_k127_3803869_2 domain protein K02674,K07004 - - 0.000000000000000006413 100.0
BYD3_k127_3803869_3 MarC family integral membrane protein K05595 - - 0.000000000000000009738 89.0
BYD3_k127_3803869_4 major pilin protein fima - - - 0.000002627 61.0
BYD3_k127_386731_0 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004938 614.0
BYD3_k127_386731_1 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 454.0
BYD3_k127_386731_2 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 405.0
BYD3_k127_386731_3 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 312.0
BYD3_k127_386731_4 PFAM Coenzyme A transferase K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000009441 255.0
BYD3_k127_386731_5 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000001114 229.0
BYD3_k127_386731_6 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000006253 202.0
BYD3_k127_386731_7 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000001315 190.0
BYD3_k127_386731_8 alcohol dehydrogenase K13953 - 1.1.1.1 0.0000000000000000000004833 97.0
BYD3_k127_3899523_0 Disulphide bond corrector protein DsbC K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008129 597.0
BYD3_k127_3899523_1 PFAM peptidase M20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 579.0
BYD3_k127_3899523_2 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000013 232.0
BYD3_k127_3899523_3 O-methyltransferase - - - 0.00000000000000000000000000000000001886 138.0
BYD3_k127_3914257_0 N-terminal domain of Peptidase_S41 in eukaryotic IRBP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 317.0
BYD3_k127_3914257_1 6-phosphogluconolactonase activity - - - 0.0000000000000000000000000000000000000000000000000000001688 222.0
BYD3_k127_3914257_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000009988 127.0
BYD3_k127_3914257_3 Sigma-70 region 2 K03088 GO:0001101,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042221,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000000000000000001593 117.0
BYD3_k127_3914257_4 extracellular matrix structural constituent - - - 0.0000003616 64.0
BYD3_k127_3923421_0 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001263 279.0
BYD3_k127_3923421_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000008928 214.0
BYD3_k127_3923421_2 Thioesterase-like superfamily K12073 - 3.1.2.28 0.000000000000001982 88.0
BYD3_k127_3926263_0 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 1.508e-240 787.0
BYD3_k127_3926263_1 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009203 538.0
BYD3_k127_3926263_10 Sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000003476 232.0
BYD3_k127_3926263_11 Domain of unknown function (DUF892) - - - 0.000000000000000000000000000000000000000000004396 172.0
BYD3_k127_3926263_12 SWI complex, BAF60b domains - - - 0.000000000000000000000000000000003545 131.0
BYD3_k127_3926263_13 VanZ like family - - - 0.00000000000000000000000000000002891 144.0
BYD3_k127_3926263_14 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000003639 126.0
BYD3_k127_3926263_15 DoxX K15977 - - 0.00000000000000000000000000001342 123.0
BYD3_k127_3926263_16 metallopeptidase activity - - - 0.0000000000000000001124 105.0
BYD3_k127_3926263_17 - - - - 0.000000000000001227 83.0
BYD3_k127_3926263_18 response to hydrogen peroxide K08985 - - 0.00000000000001168 84.0
BYD3_k127_3926263_19 - - - - 0.00000000000002105 75.0
BYD3_k127_3926263_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K04127,K11325,K21174 - 5.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008071 471.0
BYD3_k127_3926263_20 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000002517 74.0
BYD3_k127_3926263_21 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000002296 74.0
BYD3_k127_3926263_22 Glycosyl hydrolase family 70 K01142,K01176 - 3.1.11.2,3.2.1.1 0.000000009672 67.0
BYD3_k127_3926263_23 - - - - 0.00000008084 56.0
BYD3_k127_3926263_24 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006950,GO:0006970,GO:0008150,GO:0009266,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.000000437 59.0
BYD3_k127_3926263_25 Endonuclease I K07004 - - 0.00003885 57.0
BYD3_k127_3926263_26 - - - - 0.0001011 44.0
BYD3_k127_3926263_27 Evidence 4 Homologs of previously reported genes of - - - 0.0002934 48.0
BYD3_k127_3926263_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 433.0
BYD3_k127_3926263_4 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 416.0
BYD3_k127_3926263_5 Domain of unknown function (DUF4921) K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 395.0
BYD3_k127_3926263_6 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 392.0
BYD3_k127_3926263_7 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 291.0
BYD3_k127_3926263_8 Mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009228 288.0
BYD3_k127_3926263_9 VanZ like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002271 271.0
BYD3_k127_3933889_0 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008561 586.0
BYD3_k127_3933889_1 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000003549 236.0
BYD3_k127_3933889_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.0000000000000000000000000000000000001605 147.0
BYD3_k127_3942883_0 Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily K01911 - 6.2.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007168 372.0
BYD3_k127_3942883_1 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) - - - 0.000000001171 64.0
BYD3_k127_3947188_0 elongation factor G K02355 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0030312,GO:0044237,GO:0044464,GO:0071944 - 2.98e-223 713.0
BYD3_k127_3947188_1 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 440.0
BYD3_k127_3947188_10 DinB superfamily - - - 0.000000000000000000000000002578 115.0
BYD3_k127_3947188_11 - - - - 0.00000000000000000000001697 114.0
BYD3_k127_3947188_12 Belongs to the peptidase S8 family - - - 0.000009714 56.0
BYD3_k127_3947188_13 Tetratricopeptide repeat - - - 0.000268 54.0
BYD3_k127_3947188_2 PFAM sigma-54 factor interaction domain-containing protein K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 405.0
BYD3_k127_3947188_3 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000181 301.0
BYD3_k127_3947188_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001059 275.0
BYD3_k127_3947188_5 D-isomer specific 2-hydroxyacid dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000002324 207.0
BYD3_k127_3947188_6 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000002891 184.0
BYD3_k127_3947188_7 - - - - 0.0000000000000000000000000000000000000000001995 169.0
BYD3_k127_3947188_8 Signal transduction histidine kinase, nitrogen specific - - - 0.0000000000000000000000000000000000000006759 165.0
BYD3_k127_3947188_9 membrane transporter protein K07090 - - 0.000000000000000000000000000000000001886 148.0
BYD3_k127_395796_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 3.047e-257 813.0
BYD3_k127_395796_1 3-isopropylmalate dehydrogenase activity K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009155 505.0
BYD3_k127_395796_10 Lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000000000002175 164.0
BYD3_k127_395796_11 Protein of unknown function (DUF2723) - - - 0.000000000000000000000000000000000000245 159.0
BYD3_k127_395796_12 Methyltransferase K08316 - 2.1.1.171 0.00000000000000000000000000000002307 141.0
BYD3_k127_395796_13 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07710 - 2.7.13.3 0.00000000000000000000000000001446 137.0
BYD3_k127_395796_14 endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000005396 132.0
BYD3_k127_395796_15 Histidine kinase K01768,K12132 - 2.7.11.1,4.6.1.1 0.00000000000000000000000001189 113.0
BYD3_k127_395796_16 oligosaccharyl transferase activity - - - 0.00000000000000000000000002279 128.0
BYD3_k127_395796_17 Putative regulatory protein - - - 0.00000000000000000000000227 104.0
BYD3_k127_395796_18 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000001353 104.0
BYD3_k127_395796_19 Fimbrial assembly protein (PilN) K02663 - - 0.000000000000000004053 92.0
BYD3_k127_395796_2 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 395.0
BYD3_k127_395796_20 Pilus assembly protein, PilO K02664 - - 0.00000000001495 73.0
BYD3_k127_395796_22 Evidence 4 Homologs of previously reported genes of - - - 0.00005221 53.0
BYD3_k127_395796_3 Aminotransferase class I and II K00812,K10907 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 377.0
BYD3_k127_395796_4 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 367.0
BYD3_k127_395796_5 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 315.0
BYD3_k127_395796_6 pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001399 276.0
BYD3_k127_395796_7 Type II and III secretion system protein K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001315 278.0
BYD3_k127_395796_8 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000008649 188.0
BYD3_k127_395796_9 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000001204 173.0
BYD3_k127_3966907_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 6.537e-195 619.0
BYD3_k127_3966907_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000005772 261.0
BYD3_k127_3966907_2 Methylmalonyl-CoA epimerase K01849 - 5.4.99.2 0.00006811 55.0
BYD3_k127_3980764_0 Ribosomal protein S1 K02945,K03527,K12132 GO:0005575,GO:0005576,GO:0018995,GO:0020003,GO:0030430,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0065010 1.17.7.4,2.7.11.1 2.546e-221 704.0
BYD3_k127_3980764_1 tRNA synthetases class I (W and Y) K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 403.0
BYD3_k127_3980764_10 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000002434 170.0
BYD3_k127_3980764_11 UDP-N-acetylmuramate-alanine ligase K01924 - 6.3.2.8 0.00000000000000000000000000000000000001486 152.0
BYD3_k127_3980764_12 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000000000000102 135.0
BYD3_k127_3980764_13 Trypsin-like serine protease K01337 - 3.4.21.50 0.0000000000000000145 92.0
BYD3_k127_3980764_14 Belongs to the peptidase M16 family K07263 - - 0.000000000000004057 88.0
BYD3_k127_3980764_15 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.000000000002358 79.0
BYD3_k127_3980764_16 prephenate dehydrogenase K04517 - 1.3.1.12 0.00000003521 64.0
BYD3_k127_3980764_18 Sporulation related domain K03749 - - 0.0009893 52.0
BYD3_k127_3980764_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007856 364.0
BYD3_k127_3980764_3 SMART Elongator protein 3 MiaB NifB K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 299.0
BYD3_k127_3980764_4 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000003112 272.0
BYD3_k127_3980764_5 metallopeptidase activity K06402 - - 0.000000000000000000000000000000000000000000000000000000871 199.0
BYD3_k127_3980764_6 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.000000000000000000000000000000000000000000000000007788 190.0
BYD3_k127_3980764_7 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000000001676 182.0
BYD3_k127_3980764_8 mismatched DNA binding K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000005828 191.0
BYD3_k127_3980764_9 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000008054 191.0
BYD3_k127_4010801_0 Sulfatase - - - 1.584e-261 816.0
BYD3_k127_4010801_1 COG0457 FOG TPR repeat - - - 3.093e-218 698.0
BYD3_k127_4010801_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000004644 95.0
BYD3_k127_4016185_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 307.0
BYD3_k127_4016185_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000009007 177.0
BYD3_k127_4079689_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1359.0
BYD3_k127_4079689_1 Insulinase (Peptidase family M16) K07263 - - 2.305e-268 856.0
BYD3_k127_4079689_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000002113 89.0
BYD3_k127_4079689_11 PFAM Thiamine pyrophosphate enzyme, C-terminal K00170 - 1.2.7.1 0.000000000000000003064 92.0
BYD3_k127_4079689_12 aminopeptidase - - - 0.00000000005195 67.0
BYD3_k127_4079689_13 - - - - 0.000595 50.0
BYD3_k127_4079689_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 445.0
BYD3_k127_4079689_3 Chromate transporter K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 423.0
BYD3_k127_4079689_4 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 371.0
BYD3_k127_4079689_5 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008607 312.0
BYD3_k127_4079689_6 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000004875 219.0
BYD3_k127_4079689_7 DinB family - - - 0.0000000000000000000000000000000000000000006439 163.0
BYD3_k127_4079689_8 Thioredoxin-like - - - 0.00000000000000000000001139 114.0
BYD3_k127_4079689_9 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000002386 105.0
BYD3_k127_4162046_0 Histone deacetylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 491.0
BYD3_k127_4162046_1 dihydrofolate reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269 318.0
BYD3_k127_4162046_2 AAA domain - - - 0.0000000000000000000000000000000000000000000006394 183.0
BYD3_k127_4230412_0 His Kinase A (phosphoacceptor) domain - - - 0.0 2139.0
BYD3_k127_4230412_1 ERAP1-like C-terminal domain K01256,K01263 - 3.4.11.14,3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 569.0
BYD3_k127_4230412_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 473.0
BYD3_k127_4244032_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008838 525.0
BYD3_k127_4244032_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 GO:0003674,GO:0003824,GO:0004795,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 407.0
BYD3_k127_4244032_10 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.00000000000000000000000000000000000000000000006583 190.0
BYD3_k127_4244032_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000003018 165.0
BYD3_k127_4244032_12 PFAM glycosyl transferase family 9 K02843,K02849 - - 0.00000000000000000000003441 111.0
BYD3_k127_4244032_13 Branched-chain amino acid transport system / permease component K02057 - - 0.00000001073 68.0
BYD3_k127_4244032_14 Putative zinc-finger - - - 0.00003616 50.0
BYD3_k127_4244032_2 homoserine dehydrogenase NAD-binding K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 321.0
BYD3_k127_4244032_3 PFAM Response regulator receiver domain K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 312.0
BYD3_k127_4244032_4 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006363 287.0
BYD3_k127_4244032_5 Cytidine monophosphokinase K00876 - 2.7.1.48 0.0000000000000000000000000000000000000000000000000000000000000001073 244.0
BYD3_k127_4244032_6 peptide-methionine (S)-S-oxide reductase activity K07304,K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000385 220.0
BYD3_k127_4244032_7 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000003647 219.0
BYD3_k127_4244032_8 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000508 207.0
BYD3_k127_4244032_9 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 GO:0000287,GO:0003674,GO:0003824,GO:0004422,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006166,GO:0006177,GO:0006188,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032261,GO:0032263,GO:0032264,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0043094,GO:0043101,GO:0043167,GO:0043169,GO:0043173,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046040,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.8 0.0000000000000000000000000000000000000000000000000003746 194.0
BYD3_k127_4244505_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1180.0
BYD3_k127_4244505_1 MutL protein K00854 - 2.7.1.17 1.789e-267 842.0
BYD3_k127_4244505_10 - - - - 0.00000000000000000000000000000000000000000000000000004296 195.0
BYD3_k127_4244505_11 Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate K02437 - - 0.00000000000000000000000000000000000000000001274 165.0
BYD3_k127_4244505_12 - - - - 0.00000000000000000001759 98.0
BYD3_k127_4244505_13 peroxiredoxin activity - - - 0.00000000000000000002167 101.0
BYD3_k127_4244505_14 Biotin/lipoate A/B protein ligase family K03800 - 6.3.1.20 0.000000000000002638 86.0
BYD3_k127_4244505_15 - - - - 0.000000000000578 75.0
BYD3_k127_4244505_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 552.0
BYD3_k127_4244505_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 552.0
BYD3_k127_4244505_4 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 420.0
BYD3_k127_4244505_5 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 418.0
BYD3_k127_4244505_6 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 336.0
BYD3_k127_4244505_7 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007792 303.0
BYD3_k127_4244505_8 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 310.0
BYD3_k127_4244505_9 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000000000000000000000000000001734 219.0
BYD3_k127_4249414_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000734 381.0
BYD3_k127_4249414_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 334.0
BYD3_k127_4249414_10 Reeler domain - - - 0.000000001164 71.0
BYD3_k127_4249414_11 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.0006279 48.0
BYD3_k127_4249414_2 Surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001394 267.0
BYD3_k127_4249414_3 Belongs to the ParA family K04562 - - 0.00000000000000000000000000000000000000000000000000000000000001275 228.0
BYD3_k127_4249414_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000003019 216.0
BYD3_k127_4249414_5 Belongs to the sigma-70 factor family K02405 - - 0.0000000000000000000000000000000000000000000000000000000001534 212.0
BYD3_k127_4249414_6 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000002772 218.0
BYD3_k127_4249414_7 HDOD domain - - - 0.00000000000000000000000000000000000000000002214 184.0
BYD3_k127_4249414_8 TIGRFAM Diguanylate cyclase - - - 0.00000000000000000000000000000000001392 156.0
BYD3_k127_4249414_9 Cupin superfamily (DUF985) K09705 - - 0.000000000000000000000000166 108.0
BYD3_k127_4256315_0 PFAM carboxyl transferase K01969,K15052 - 2.1.3.15,6.4.1.3,6.4.1.4 3.601e-239 749.0
BYD3_k127_4256315_1 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005441 595.0
BYD3_k127_4256315_10 3-methylcrotonyl-CoA carboxylase subunit alpha K01968 - 6.4.1.4 0.00000000000002214 87.0
BYD3_k127_4256315_11 multi-organism process K03195 - - 0.00000000009958 71.0
BYD3_k127_4256315_2 Biotin carboxylase C-terminal domain K01968,K13777 - 6.4.1.4,6.4.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 431.0
BYD3_k127_4256315_3 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 373.0
BYD3_k127_4256315_4 translation release factor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005778 258.0
BYD3_k127_4256315_5 PFAM Enoyl-CoA hydratase isomerase K13766,K15312 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000003161 241.0
BYD3_k127_4256315_6 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000003302 200.0
BYD3_k127_4256315_7 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000009686 171.0
BYD3_k127_4256315_8 PFAM Iron sulphur-containing domain, CDGSH-type - - - 0.000000000000000000000000003972 112.0
BYD3_k127_4256315_9 protein histidine kinase activity - - - 0.00000000000000000000002004 116.0
BYD3_k127_4302786_0 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 349.0
BYD3_k127_4302786_1 Phosphodiester glycosidase - - - 0.000000000000000000000000000000000000000000000002434 185.0
BYD3_k127_4302786_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000001769 87.0
BYD3_k127_43107_0 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000000000000002014 162.0
BYD3_k127_43107_1 Pilus assembly protein PilX K02673 - - 0.000001418 59.0
BYD3_k127_4339993_0 diaminopimelate decarboxylase activity K01586,K12526 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008836,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.4,4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 441.0
BYD3_k127_4339993_1 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 395.0
BYD3_k127_4339993_10 PFAM ATP-binding region ATPase domain protein K07709 - 2.7.13.3 0.00000000000000000000000000000658 130.0
BYD3_k127_4339993_11 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000008609 72.0
BYD3_k127_4339993_12 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000001038 65.0
BYD3_k127_4339993_13 PFAM Cell envelope-related transcriptional attenuator domain - - - 0.000004655 54.0
BYD3_k127_4339993_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002344 290.0
BYD3_k127_4339993_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001417 273.0
BYD3_k127_4339993_4 Deoxynucleoside kinase K15518 - 2.7.1.113 0.0000000000000000000000000000000000000000000000000000000000000000009573 237.0
BYD3_k127_4339993_5 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000004726 217.0
BYD3_k127_4339993_6 Scavenger mRNA decapping enzyme C-term binding K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000003264 177.0
BYD3_k127_4339993_7 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000009993 168.0
BYD3_k127_4339993_8 Peptidylprolyl isomerase K01802,K03769,K03770 - 5.2.1.8 0.00000000000000000000000000000000002129 155.0
BYD3_k127_4339993_9 PFAM CAAX amino terminal protease family - - - 0.0000000000000000000000000000000001808 153.0
BYD3_k127_4373335_0 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 524.0
BYD3_k127_4373335_1 peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003299 402.0
BYD3_k127_4373335_2 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000001006 147.0
BYD3_k127_4385761_0 Heat shock 70 kDa protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0018995,GO:0019219,GO:0019222,GO:0020003,GO:0022607,GO:0030430,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0033643,GO:0033646,GO:0033655,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043230,GO:0043531,GO:0043656,GO:0043657,GO:0043933,GO:0044085,GO:0044183,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0065010,GO:0070887,GO:0071310,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 1.563e-296 922.0
BYD3_k127_4385761_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 505.0
BYD3_k127_4385761_2 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007298 468.0
BYD3_k127_4385761_3 Two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004069 306.0
BYD3_k127_4385761_4 glucan 1,4-alpha-glucosidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001504 296.0
BYD3_k127_4385761_5 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000001432 220.0
BYD3_k127_4385761_6 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000004368 164.0
BYD3_k127_4385761_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000001509 136.0
BYD3_k127_4399116_0 Magnesium chelatase, subunit ChlI C-terminal K06400,K07391 - - 0.0000000000000000000000000000000000000003649 160.0
BYD3_k127_4399116_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000001405 135.0
BYD3_k127_4410524_0 ZIP Zinc transporter K07238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001349 266.0
BYD3_k127_4410524_1 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001882 283.0
BYD3_k127_4410524_2 HD domain - - - 0.00000000000000000000000000000000000000000008521 179.0
BYD3_k127_4410524_3 DNA-templated transcription, initiation K03088 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006950,GO:0006970,GO:0008150,GO:0009266,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.000000109 61.0
BYD3_k127_4410524_4 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000385 63.0
BYD3_k127_4410524_5 response regulator receiver K03407 - 2.7.13.3 0.000002244 60.0
BYD3_k127_4410524_6 PFAM CheW domain protein K03415 - - 0.0009869 50.0
BYD3_k127_4427367_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009605,GO:0009987,GO:0009991,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.7.6.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 650.0
BYD3_k127_4427367_1 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 466.0
BYD3_k127_4427367_2 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005055 380.0
BYD3_k127_4427367_3 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002087 293.0
BYD3_k127_4427367_4 Adenosine specific kinase K09129 - - 0.00000000000000000000000000000000000000000000407 179.0
BYD3_k127_4427367_5 PFAM Maf family protein K06287 - - 0.00000000000000000000000000000000000000005023 160.0
BYD3_k127_4427367_6 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000196 166.0
BYD3_k127_4427367_7 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000227 121.0
BYD3_k127_4427367_8 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000008889 72.0
BYD3_k127_4479624_0 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 612.0
BYD3_k127_4479624_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000001188 218.0
BYD3_k127_4479624_2 UDP-N-acetylmuramate-alanine ligase K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000006123 219.0
BYD3_k127_4479624_3 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000007708 143.0
BYD3_k127_4479624_5 cellulase activity K01179,K01361,K13277,K21449 - 3.2.1.4,3.4.21.96 0.0000000000002277 73.0
BYD3_k127_4479624_6 protein secretion K20276 - - 0.000000009555 68.0
BYD3_k127_44974_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.751e-207 670.0
BYD3_k127_44974_1 Ribonuclease E/G family K08301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009289 521.0
BYD3_k127_44974_10 protein conserved in bacteria (DUF2344) - - - 0.0000000000000000000000000007153 126.0
BYD3_k127_44974_11 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000146 91.0
BYD3_k127_44974_12 Periplasmic protein TonB links inner and outer membranes K03832 - - 0.000000000002215 80.0
BYD3_k127_44974_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007057 371.0
BYD3_k127_44974_3 PFAM ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 309.0
BYD3_k127_44974_4 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009047 295.0
BYD3_k127_44974_5 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000006489 286.0
BYD3_k127_44974_6 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000001039 210.0
BYD3_k127_44974_7 TIGRFAM RNA polymerase sigma-54 factor, RpoN K03092 - - 0.0000000000000000000000000000000000000000000000000000000363 209.0
BYD3_k127_44974_8 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000003232 125.0
BYD3_k127_44974_9 Lipopolysaccharide-assembly, LptC-related K09774,K11719 - - 0.00000000000000000000000000002171 126.0
BYD3_k127_457199_0 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 1.098e-194 637.0
BYD3_k127_457199_1 Uncharacterized protein conserved in bacteria (DUF2252) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005281 600.0
BYD3_k127_457199_2 COG NOG14600 non supervised orthologous group - - - 0.0000000000000000000000000002042 114.0
BYD3_k127_457199_3 Protein of unknown function (DUF664) - - - 0.0000000000000006043 85.0
BYD3_k127_457199_4 Uncharacterized protein conserved in bacteria (DUF2252) - - - 0.00000000000007668 78.0
BYD3_k127_457199_5 acetyltransferase - - - 0.00000000001604 72.0
BYD3_k127_457199_6 - - - - 0.000001182 55.0
BYD3_k127_457199_7 - - - - 0.000001691 51.0
BYD3_k127_4581480_0 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001021 265.0
BYD3_k127_4581480_1 Protein of unknown function (DUF541) K09797 - - 0.00000000000000000000000000000000000000000000000000000000000001209 226.0
BYD3_k127_4581480_2 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000001461 196.0
BYD3_k127_4581480_3 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000004969 195.0
BYD3_k127_4581480_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K20444 - - 0.0000000000000000000000000000000000007118 146.0
BYD3_k127_4581480_5 EamA-like transporter family - - - 0.00000000000000000000000000005865 125.0
BYD3_k127_4581480_6 - - - - 0.0000000001872 66.0
BYD3_k127_4592166_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 466.0
BYD3_k127_4592166_1 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019534,GO:0019904,GO:0022857,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004919 306.0
BYD3_k127_4592166_2 PFAM OmpA MotB domain protein K03640 - - 0.0000000000000000000000000000000000000004616 155.0
BYD3_k127_4592166_3 Outer membrane lipoprotein - - - 0.00000000000000000000000000001317 128.0
BYD3_k127_4592166_4 TonB C terminal K03646,K03832 - - 0.00000000000000892 87.0
BYD3_k127_4624008_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 552.0
BYD3_k127_4624008_1 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 306.0
BYD3_k127_4624008_2 TIGRFAM cytochrome c nitrate reductase, small subunit K15876 - - 0.000000000000000000000000000000000000000000000000000008775 196.0
BYD3_k127_4624008_3 Gram-negative-bacterium-type cell wall biogenesis - - - 0.0005086 52.0
BYD3_k127_4627182_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 486.0
BYD3_k127_4627182_1 Domains GAF, HisKA, HATPase_c, GAF, HD-GYP-related - - - 0.0000000000000000000000000000000000000000000000000000000000000007205 232.0
BYD3_k127_4627182_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.0000000000000000000000000000000000000000000006771 169.0
BYD3_k127_4627182_3 PFAM response regulator receiver K02483,K07658,K07668 - - 0.000000000000000000000000000000000000002362 152.0
BYD3_k127_4627182_4 Inactive TPR repeat-containing thioredoxin K09527 GO:0003002,GO:0006950,GO:0006970,GO:0007154,GO:0007165,GO:0007275,GO:0007389,GO:0008150,GO:0009628,GO:0009719,GO:0009725,GO:0009733,GO:0009734,GO:0009741,GO:0009742,GO:0009755,GO:0009987,GO:0010033,GO:0010051,GO:0010305,GO:0014070,GO:0023052,GO:0032501,GO:0032502,GO:0032870,GO:0033993,GO:0042221,GO:0043401,GO:0048545,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070887,GO:0071310,GO:0071365,GO:0071367,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:1901700,GO:1901701 - 0.0006784 52.0
BYD3_k127_4627358_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695,K03696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 333.0
BYD3_k127_4627358_1 Ndr family K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000000000009072 221.0
BYD3_k127_4646633_0 PFAM acyl-CoA dehydrogenase domain protein K00252 - 1.3.8.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 537.0
BYD3_k127_4646633_1 - - - - 0.00000000000000000000000000000002666 143.0
BYD3_k127_4646633_2 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.00000007029 63.0
BYD3_k127_4652847_0 Large-conductance mechanosensitive channel, MscL K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.00000000000000000000000000000000000000000000004284 171.0
BYD3_k127_4652847_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000007416 166.0
BYD3_k127_4652847_2 Thrombospondin type 3 repeat - - - 0.00000000000000000000000000000000000000000007803 171.0
BYD3_k127_4652847_3 gluconolactonase activity K01406,K14274,K20276,K21449 - 3.4.24.40 0.0000000000000000000000001656 125.0
BYD3_k127_4652847_4 - - - - 0.000000000000000001416 102.0
BYD3_k127_4652847_5 Glycosyl hydrolase catalytic core - - - 0.000000005088 71.0
BYD3_k127_4652847_6 - - - - 0.00000002656 59.0
BYD3_k127_4652847_7 xyloglucan:xyloglucosyl transferase activity - - - 0.0005262 54.0
BYD3_k127_4653265_0 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003656 410.0
BYD3_k127_4653265_1 Polyphosphate kinase 2 (PPK2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007146 320.0
BYD3_k127_4653265_2 HMGL-like K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000016 196.0
BYD3_k127_4653265_3 Tetratricopeptide repeat - - - 0.00000004428 66.0
BYD3_k127_4689044_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K09461 - 1.14.13.40 1e-323 1006.0
BYD3_k127_4689044_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K01556 - 3.7.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121 456.0
BYD3_k127_4689044_10 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000001347 140.0
BYD3_k127_4689044_11 - - - - 0.000000000001511 75.0
BYD3_k127_4689044_2 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 456.0
BYD3_k127_4689044_3 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 450.0
BYD3_k127_4689044_4 tryptophan 2,3-dioxygenase activity K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 344.0
BYD3_k127_4689044_5 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009291 345.0
BYD3_k127_4689044_6 Protein of unknown function (DUF3494) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 345.0
BYD3_k127_4689044_7 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004683 314.0
BYD3_k127_4689044_8 AAA ATPase domain K05847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 289.0
BYD3_k127_4689044_9 enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007873 276.0
BYD3_k127_4702000_0 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 480.0
BYD3_k127_4702000_1 Acyl-CoA dehydrogenase, middle domain K18244 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 397.0
BYD3_k127_4702000_2 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000004076 197.0
BYD3_k127_4723196_0 ATPase MipZ K02282 - - 0.00000000000000000000000000001789 131.0
BYD3_k127_4723196_1 Putative Flp pilus-assembly TadE/G-like - - - 0.000000001663 70.0
BYD3_k127_4723196_2 Putative Flp pilus-assembly TadE/G-like - - - 0.0000004683 60.0
BYD3_k127_4837895_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006422 507.0
BYD3_k127_4837895_1 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 391.0
BYD3_k127_4837895_10 - - - - 0.0000000000000000000008904 97.0
BYD3_k127_4837895_11 - - - - 0.00000000000000004867 83.0
BYD3_k127_4837895_13 extracellular matrix structural constituent - - - 0.0000000001348 73.0
BYD3_k127_4837895_15 BNR repeat-like domain K01186 - 3.2.1.18 0.000009605 52.0
BYD3_k127_4837895_16 Domain of unknown function (DUF378) - - - 0.00002533 48.0
BYD3_k127_4837895_2 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000867 386.0
BYD3_k127_4837895_3 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008712 348.0
BYD3_k127_4837895_4 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 374.0
BYD3_k127_4837895_5 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 284.0
BYD3_k127_4837895_6 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000009245 244.0
BYD3_k127_4837895_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000006203 223.0
BYD3_k127_4837895_8 B12 binding domain K22491 - - 0.00000000000000000000000000000000000000000003938 175.0
BYD3_k127_4837895_9 Secreted and surface protein containing fasciclin-like repeats - - - 0.0000000000000000000000000000000000004286 147.0
BYD3_k127_4887155_0 NACHT domain - - - 4.334e-260 838.0
BYD3_k127_4887155_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella K01195 - 3.2.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000005646 274.0
BYD3_k127_4887155_2 Protein of unknown function (DUF4239) - - - 0.000000000000000000000000000000000000000000000000000000000000008688 227.0
BYD3_k127_4887155_3 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000004794 189.0
BYD3_k127_4887155_4 Transcriptional K13638 - - 0.000000000000000000000000001438 120.0
BYD3_k127_4887155_5 extracellular matrix structural constituent - - - 0.00000001942 67.0
BYD3_k127_4888085_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 466.0
BYD3_k127_4888085_1 Histidine kinase K07652 - 2.7.13.3 0.0000000000000000000000000000000000000000000000002816 199.0
BYD3_k127_4888085_2 Mechanosensitive ion channel K22044 - - 0.00000000000000005141 86.0
BYD3_k127_4888085_3 - - - - 0.00000004438 62.0
BYD3_k127_4900614_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 7.908e-241 767.0
BYD3_k127_4900614_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009398 403.0
BYD3_k127_4900614_2 Propeptide_C25 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 381.0
BYD3_k127_4900614_3 Evidence 5 No homology to any previously reported sequences K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 335.0
BYD3_k127_4900614_4 Glycoside hydrolase family 24 - - - 0.0000000000000000000000000000000000000000000000000000001014 224.0
BYD3_k127_4900614_5 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000001648 183.0
BYD3_k127_4900614_6 Trm112p-like protein K09791 - - 0.0000000000000004085 81.0
BYD3_k127_4900614_7 - - - - 0.00000000000001564 85.0
BYD3_k127_4900614_8 - - - - 0.0000000002586 71.0
BYD3_k127_4900614_9 amine dehydrogenase activity - - - 0.00001464 57.0
BYD3_k127_4923774_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298,K02827,K15408 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009486,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015453,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0016679,GO:0016682,GO:0017144,GO:0019637,GO:0019646,GO:0019693,GO:0020037,GO:0022804,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0034641,GO:0040007,GO:0042773,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0048038,GO:0048039,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901360,GO:1901363,GO:1901564,GO:1902494,GO:1902600 1.10.3.10,1.10.3.12,1.9.3.1 1.198e-208 662.0
BYD3_k127_4923774_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 392.0
BYD3_k127_4923774_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 320.0
BYD3_k127_4923774_3 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0040007,GO:0042773,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0051704,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001434 271.0
BYD3_k127_4923774_4 cytochrome oxidase assembly K02259 - - 0.00000000000000000000000000033 127.0
BYD3_k127_4923774_5 Cytochrome c oxidase assembly protein K02258 GO:0000003,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0007275,GO:0008150,GO:0009653,GO:0009791,GO:0009846,GO:0009856,GO:0009893,GO:0010015,GO:0010101,GO:0010155,GO:0016020,GO:0016021,GO:0019222,GO:0022414,GO:0022622,GO:0022898,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031323,GO:0031325,GO:0031966,GO:0031967,GO:0031975,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032592,GO:0032879,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043270,GO:0043467,GO:0043621,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044706,GO:0048364,GO:0048518,GO:0048522,GO:0048528,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0051049,GO:0051050,GO:0051341,GO:0051353,GO:0051704,GO:0065007,GO:0065009,GO:0090696,GO:0090697,GO:0090698,GO:0098573,GO:0099402,GO:1904062,GO:1904064,GO:1904732,GO:1904734,GO:1904959,GO:1904960,GO:1905392 - 0.00000000000000000001547 106.0
BYD3_k127_4923774_6 Cytochrome c K07243 - - 0.000000000003905 72.0
BYD3_k127_4943638_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 428.0
BYD3_k127_4943638_1 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008557 407.0
BYD3_k127_4943638_2 Peptidase M56 - - - 0.000000000000000000000000000000000000000001634 176.0
BYD3_k127_4943638_3 - - - - 0.000000003758 69.0
BYD3_k127_4943638_4 Evidence 5 No homology to any previously reported sequences K14194,K21449 - - 0.000004534 58.0
BYD3_k127_4943638_5 - - - - 0.00001867 56.0
BYD3_k127_4962766_0 4Fe-4S binding domain - - - 4.359e-237 759.0
BYD3_k127_4962766_1 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000003803 248.0
BYD3_k127_4962766_2 Methionine biosynthesis protein MetW - - - 0.000000000000000000000002607 120.0
BYD3_k127_5002916_0 Cytochrome C assembly protein - - - 7.65e-212 681.0
BYD3_k127_5002916_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 605.0
BYD3_k127_5002916_10 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0004311 48.0
BYD3_k127_5002916_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 432.0
BYD3_k127_5002916_3 MnmE helical domain K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003927 296.0
BYD3_k127_5002916_4 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000247 239.0
BYD3_k127_5002916_5 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.000000000000000000006329 101.0
BYD3_k127_5002916_6 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000463 94.0
BYD3_k127_5002916_7 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000002149 89.0
BYD3_k127_5002916_8 PFAM Single-stranded nucleic acid binding R3H K06346 - - 0.000000000000003373 86.0
BYD3_k127_5002916_9 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000007846 64.0
BYD3_k127_5017358_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 374.0
BYD3_k127_5062893_0 ABC transporter K06147,K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 582.0
BYD3_k127_5062893_1 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 508.0
BYD3_k127_5062893_2 His Kinase A (phosphoacceptor) domain K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 496.0
BYD3_k127_5062893_3 ABC transporter, transmembrane K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 477.0
BYD3_k127_5062893_4 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000003375 245.0
BYD3_k127_5062893_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000007605 113.0
BYD3_k127_5062893_6 YCII-related domain - - - 0.000000000000000000000001719 117.0
BYD3_k127_5062893_7 C4-type zinc ribbon domain K07164,K22391 - 3.5.4.16 0.0000000000000000000006954 104.0
BYD3_k127_5096333_0 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000002834 237.0
BYD3_k127_5096333_1 PFAM DNA photolyase, FAD-binding K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000001414 213.0
BYD3_k127_5096333_2 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000002089 160.0
BYD3_k127_5096333_3 Domain of unknown function(DUF2779) - - - 0.000000000000007036 85.0
BYD3_k127_5119843_0 - - - - 0.0000000000000000000000000000000000000000000000000000000004572 227.0
BYD3_k127_5119843_1 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.00000000000000000000000006093 110.0
BYD3_k127_5119843_2 Belongs to the UPF0337 (CsbD) family - - - 0.00000000000000000000004705 104.0
BYD3_k127_5119843_3 Calcineurin-like phosphoesterase - - - 0.000000000000000005976 98.0
BYD3_k127_5119843_4 Surface antigen - - - 0.00006917 55.0
BYD3_k127_5204203_0 Multicopper oxidase K06324 - 1.16.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 503.0
BYD3_k127_5204203_1 Sigma-54 interaction domain K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 402.0
BYD3_k127_5204203_2 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000005471 236.0
BYD3_k127_5204203_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000001286 177.0
BYD3_k127_5244623_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008704 526.0
BYD3_k127_5244623_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 477.0
BYD3_k127_5244623_10 glycosyl transferase group 1 K00754 - - 0.00001875 57.0
BYD3_k127_5244623_2 adenosine deaminase K01488 - 3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 379.0
BYD3_k127_5244623_3 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008027 377.0
BYD3_k127_5244623_4 Bacillithiol biosynthesis BshC K22136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006526 295.0
BYD3_k127_5244623_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000005611 256.0
BYD3_k127_5244623_6 ZIP Zinc transporter K07238,K11021,K16267 - - 0.0000000000000000000000000000000000000000000000000000000000000000006841 236.0
BYD3_k127_5244623_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000005511 191.0
BYD3_k127_5244623_8 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000001245 186.0
BYD3_k127_5244623_9 O-methyltransferase - - - 0.0000000000000000003381 99.0
BYD3_k127_5252047_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005828 537.0
BYD3_k127_5252047_1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 543.0
BYD3_k127_5252047_10 Peptidase family M1 domain - - - 0.00000000000000000000000009342 124.0
BYD3_k127_5252047_11 PFAM Thiamin pyrophosphokinase catalytic K00949 - 2.7.6.2 0.00000000000000000000001296 112.0
BYD3_k127_5252047_2 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 501.0
BYD3_k127_5252047_3 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005409 451.0
BYD3_k127_5252047_4 Sodium:solute symporter family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 345.0
BYD3_k127_5252047_5 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 291.0
BYD3_k127_5252047_6 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003491 309.0
BYD3_k127_5252047_7 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000006945 245.0
BYD3_k127_5252047_8 Doxx family K15977 - - 0.00000000000000000000000000000005686 130.0
BYD3_k127_5252047_9 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000188 121.0
BYD3_k127_5290333_0 DNA polymerase III alpha subunit K02337,K14162 - 2.7.7.7 7.616e-294 936.0
BYD3_k127_5290333_1 Cytochrome C and Quinol oxidase polypeptide I - - - 1.089e-218 694.0
BYD3_k127_5290333_10 Family of unknown function (DUF1028) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005905 352.0
BYD3_k127_5290333_11 Uncharacterized protein conserved in bacteria (DUF2330) K00347,K21163 GO:0000166,GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008137,GO:0008144,GO:0008150,GO:0008152,GO:0010181,GO:0015672,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0019842,GO:0030001,GO:0030964,GO:0032553,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0044425,GO:0044464,GO:0048037,GO:0050136,GO:0050662,GO:0051179,GO:0051234,GO:0055114,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:1901265,GO:1901363,GO:1902444,GO:1902494 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 335.0
BYD3_k127_5290333_12 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003572 349.0
BYD3_k127_5290333_13 pfam abc K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006815 309.0
BYD3_k127_5290333_14 ZIP Zinc transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 313.0
BYD3_k127_5290333_15 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000599 317.0
BYD3_k127_5290333_16 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 319.0
BYD3_k127_5290333_17 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 314.0
BYD3_k127_5290333_18 type II secretion system protein E K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002978 277.0
BYD3_k127_5290333_19 iron ion binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000162 272.0
BYD3_k127_5290333_2 Berberine and berberine like - - - 8.497e-209 659.0
BYD3_k127_5290333_20 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002629 293.0
BYD3_k127_5290333_21 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000005957 267.0
BYD3_k127_5290333_22 ABC-2 family transporter protein K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001921 280.0
BYD3_k127_5290333_23 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000006378 267.0
BYD3_k127_5290333_24 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000008164 260.0
BYD3_k127_5290333_25 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006606 255.0
BYD3_k127_5290333_26 regulator of chromosome condensation, RCC1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000004247 263.0
BYD3_k127_5290333_27 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000416 247.0
BYD3_k127_5290333_28 ABC transporter, ATP-binding protein K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000002313 229.0
BYD3_k127_5290333_29 NmrA-like family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000009681 231.0
BYD3_k127_5290333_3 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004591 487.0
BYD3_k127_5290333_30 PFAM Type II secretion system F K12511 - - 0.0000000000000000000000000000000000000000000000000000001483 208.0
BYD3_k127_5290333_31 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000006879 189.0
BYD3_k127_5290333_32 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.0000000000000000000000000000000000000000000000000002273 194.0
BYD3_k127_5290333_33 Type II secretion system K12510 - - 0.0000000000000000000000000000000000000000000000000006896 196.0
BYD3_k127_5290333_34 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356,K03503 - 3.4.21.88 0.000000000000000000000000000000000000000000000000004357 190.0
BYD3_k127_5290333_35 Cytochrome c oxidase subunit III - - - 0.0000000000000000000000000000000000000000000000000134 205.0
BYD3_k127_5290333_36 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.00000000000000000000000000000000000000000000000001433 190.0
BYD3_k127_5290333_37 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000000000008221 187.0
BYD3_k127_5290333_38 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000009157 167.0
BYD3_k127_5290333_39 DinB superfamily - - - 0.0000000000000000000000000000000000000000874 156.0
BYD3_k127_5290333_4 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 455.0
BYD3_k127_5290333_40 Protein of unknown function (DUF3303) - - - 0.0000000000000000000000000000000000419 135.0
BYD3_k127_5290333_41 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000001509 136.0
BYD3_k127_5290333_42 - - - - 0.0000000000000000000000000000001868 130.0
BYD3_k127_5290333_43 PFAM UMUC domain protein DNA-repair protein K02346 - 2.7.7.7 0.0000000000000000000000000009217 127.0
BYD3_k127_5290333_44 MlaD protein K02067 - - 0.000000000000000000000000006241 123.0
BYD3_k127_5290333_45 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000006839 115.0
BYD3_k127_5290333_46 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000002653 107.0
BYD3_k127_5290333_47 Cytochrome c oxidase subunit III K02276,K02299 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 1.9.3.1 0.0000000000000000000003004 105.0
BYD3_k127_5290333_48 Transport and Golgi organisation 2 - - - 0.000000000000000001072 98.0
BYD3_k127_5290333_49 transport system permease component - - - 0.0000000000000001377 90.0
BYD3_k127_5290333_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 469.0
BYD3_k127_5290333_50 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000007177 76.0
BYD3_k127_5290333_51 Glycosyl hydrolase family 70 K01142,K01176 - 3.1.11.2,3.2.1.1 0.00000000435 70.0
BYD3_k127_5290333_52 DinB family - - - 0.0000003293 58.0
BYD3_k127_5290333_53 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.0000004732 63.0
BYD3_k127_5290333_54 protein secretion K20276 - - 0.0000004967 63.0
BYD3_k127_5290333_55 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000003299 58.0
BYD3_k127_5290333_56 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.0003874 48.0
BYD3_k127_5290333_6 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 425.0
BYD3_k127_5290333_7 Uncharacterized protein conserved in bacteria (DUF2330) K00347,K21163 GO:0000166,GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008137,GO:0008144,GO:0008150,GO:0008152,GO:0010181,GO:0015672,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0019842,GO:0030001,GO:0030964,GO:0032553,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0044425,GO:0044464,GO:0048037,GO:0050136,GO:0050662,GO:0051179,GO:0051234,GO:0055114,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:1901265,GO:1901363,GO:1902444,GO:1902494 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 432.0
BYD3_k127_5290333_8 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 441.0
BYD3_k127_5290333_9 PFAM Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000517 365.0
BYD3_k127_5321955_0 Cupredoxin-like domain K00376 - 1.7.2.4 6.554e-200 637.0
BYD3_k127_5321955_1 Cytochrome c - - - 0.00000000000004805 83.0
BYD3_k127_5321955_2 Cyclic nucleotide-monophosphate binding domain K09766 - - 0.00005117 55.0
BYD3_k127_5321955_3 hemerythrin HHE cation binding domain - - - 0.000372 51.0
BYD3_k127_5326867_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 4.182e-253 790.0
BYD3_k127_5326867_1 UvrD/REP helicase N-terminal domain K03657,K07465 - 3.6.4.12 4.118e-208 684.0
BYD3_k127_5326867_10 transmembrane transport K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000002765 236.0
BYD3_k127_5326867_11 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000002804 144.0
BYD3_k127_5326867_12 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.000000000000000000000000000000000004162 141.0
BYD3_k127_5326867_13 ABC-2 family transporter protein K09696 - - 0.00000000000000000000000000000001375 143.0
BYD3_k127_5326867_14 chain release factor K15034 - - 0.000000000000000000000000000003179 125.0
BYD3_k127_5326867_15 Histidine kinase K02668,K07709,K07710 - 2.7.13.3 0.00000004619 60.0
BYD3_k127_5326867_2 Short chain fatty acid transporter K02106 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 462.0
BYD3_k127_5326867_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 350.0
BYD3_k127_5326867_4 PFAM peptidase M24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009596 355.0
BYD3_k127_5326867_5 Metallopeptidase family M24 K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004573 306.0
BYD3_k127_5326867_6 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 302.0
BYD3_k127_5326867_7 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002084 286.0
BYD3_k127_5326867_8 Bacterial extracellular solute-binding proteins, family 5 Middle K13893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002004 284.0
BYD3_k127_5326867_9 ABC transporter K01990,K09697 - 3.6.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000001138 263.0
BYD3_k127_5334522_0 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 GO:0003674,GO:0003824,GO:0004016,GO:0009975,GO:0016829,GO:0016849 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000000000001885 253.0
BYD3_k127_5334522_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000008925 139.0
BYD3_k127_5334522_2 CAAX protease self-immunity - - - 0.000000000000000000000003722 111.0
BYD3_k127_5334522_3 PspC domain - - - 0.00000000000000001013 87.0
BYD3_k127_5334522_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000003154 62.0
BYD3_k127_5334522_5 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00005266 55.0
BYD3_k127_5364378_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 501.0
BYD3_k127_5364378_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006503 441.0
BYD3_k127_5364378_2 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009467 425.0
BYD3_k127_5364378_3 Lysylphosphatidylglycerol synthase TM region - - - 0.0000000000000000000000000000000000000000000000000000002071 208.0
BYD3_k127_5364378_4 Uncharacterized ACR, COG1993 K06199,K09137 - - 0.00000000000000000000000000000000000000000000000005813 184.0
BYD3_k127_5364378_5 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.000000000000000000000000000003352 128.0
BYD3_k127_5423375_0 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 395.0
BYD3_k127_5423375_1 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000000000000001771 243.0
BYD3_k127_5423375_2 Protein of unknown function (DUF4239) - - - 0.0000000000000000000000000000000000000641 147.0
BYD3_k127_5423375_3 NHL repeat containing protein - - - 0.0000000000000000003308 96.0
BYD3_k127_5423375_4 Protein of unknown function (DUF1572) - - - 0.000000000000000002591 91.0
BYD3_k127_5423375_5 Uncharacterized protein conserved in bacteria (DUF2087) - - - 0.00000000000003497 80.0
BYD3_k127_5423375_6 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.00000007665 58.0
BYD3_k127_5484398_0 response regulator K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005684 420.0
BYD3_k127_5484398_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 308.0
BYD3_k127_5484398_2 transcription factor binding K02584,K11914 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 319.0
BYD3_k127_5484398_3 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000001695 213.0
BYD3_k127_5484398_4 Histidine kinase K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000007008 209.0
BYD3_k127_5484398_5 cellulase activity K06882 - - 0.00000000000000000000000000000000000000000000000000001685 200.0
BYD3_k127_5484398_6 membrane organization K07278 - - 0.00000003556 67.0
BYD3_k127_5484398_7 Domain of unknown function (DUF4390) - - - 0.000001252 60.0
BYD3_k127_5484398_8 Polymer-forming cytoskeletal - - - 0.000001364 60.0
BYD3_k127_5525131_0 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003538 400.0
BYD3_k127_5525131_1 PFAM oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000003084 212.0
BYD3_k127_5525131_2 Protein of unknown function (DUF354) K09726 - - 0.00000000000000000000000000000000000000000000000000005858 203.0
BYD3_k127_5525131_3 Highly conserved protein containing a thioredoxin domain K20948 - - 0.000000000000000000000000000000000000005399 162.0
BYD3_k127_5539942_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 6.757e-218 705.0
BYD3_k127_5539942_1 COG0477 Permeases of the major facilitator superfamily K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 446.0
BYD3_k127_5539942_2 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 434.0
BYD3_k127_5539942_3 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000001289 180.0
BYD3_k127_5539942_4 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000000000001758 168.0
BYD3_k127_5539942_5 Cysteine-rich secretory protein family - - - 0.0000000000000000000000006559 112.0
BYD3_k127_5539942_6 Cysteine-rich secretory protein family - - - 0.00000000000000000000008576 106.0
BYD3_k127_5539942_7 - - - - 0.000000000004695 67.0
BYD3_k127_5547405_0 Protein of unknown function (DUF2493) - - - 0.0000000000000000000000000000001036 131.0
BYD3_k127_5565688_0 Periplasmic copper-binding protein (NosD) K07218 - - 0.000000000000000000000000000000000000000000000000000000005657 210.0
BYD3_k127_5565688_1 ABC transporter K01990,K19340 - - 0.0000000000000000000000000000000000000000000000000128 192.0
BYD3_k127_5567476_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1236.0
BYD3_k127_5567476_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 434.0
BYD3_k127_5567476_10 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000000000000000000000000000000000000000004296 244.0
BYD3_k127_5567476_11 GTP cyclohydrolase II K01497,K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000003012 241.0
BYD3_k127_5567476_12 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.000000000000000000000000000000000000000000000000000004362 202.0
BYD3_k127_5567476_13 - - - - 0.00000000000000000000000000000000000000000000001769 177.0
BYD3_k127_5567476_14 - - - - 0.00000000000000000000000000000000000000000001317 185.0
BYD3_k127_5567476_15 Oxidoreductase NAD-binding domain - - - 0.00000000000000000000000000000000000002879 155.0
BYD3_k127_5567476_16 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000005698 154.0
BYD3_k127_5567476_17 protein maturation K13628 - - 0.0000000000000000000000000000004374 129.0
BYD3_k127_5567476_18 TonB-dependent receptor K02014,K16087 - - 0.0000000000000000000000001091 124.0
BYD3_k127_5567476_19 Transcriptional regulator - - - 0.000000000000000000000000243 115.0
BYD3_k127_5567476_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 429.0
BYD3_k127_5567476_20 Transcriptional regulator K07729 - - 0.00000000000000000000003328 110.0
BYD3_k127_5567476_21 SnoaL-like domain - - - 0.0000000000000000000001498 109.0
BYD3_k127_5567476_22 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00363,K05710 - 1.7.1.15 0.0000000000000000000001837 104.0
BYD3_k127_5567476_23 - - - - 0.0000000000000000000002274 103.0
BYD3_k127_5567476_25 TIGRFAM amino acid adenylation domain protein - - - 0.0000000000000000003184 98.0
BYD3_k127_5567476_26 Variant SH3 domain - - - 0.00000000000000005041 86.0
BYD3_k127_5567476_27 ChrR Cupin-like domain - - - 0.0000000005146 69.0
BYD3_k127_5567476_28 - - - - 0.00000107 57.0
BYD3_k127_5567476_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 407.0
BYD3_k127_5567476_30 - - - - 0.0002845 51.0
BYD3_k127_5567476_31 Peptidase family C25 - - - 0.0003611 54.0
BYD3_k127_5567476_4 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008299 332.0
BYD3_k127_5567476_5 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005933 314.0
BYD3_k127_5567476_6 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 319.0
BYD3_k127_5567476_7 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009972 257.0
BYD3_k127_5567476_8 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001385 248.0
BYD3_k127_5567476_9 PFAM ATP-binding region, ATPase domain protein K02486 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000006834 259.0
BYD3_k127_5574280_0 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 592.0
BYD3_k127_5574280_1 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005382 258.0
BYD3_k127_5574280_2 cold-shock protein K03704 - - 0.00000000000000000000000001057 110.0
BYD3_k127_5574280_3 extracellular matrix structural constituent - - - 0.0000000004732 72.0
BYD3_k127_5574280_4 PFAM SMP-30 Gluconolaconase - - - 0.000000003401 69.0
BYD3_k127_5574280_5 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000428 53.0
BYD3_k127_5578093_0 ABC transporter - - - 3.494e-258 805.0
BYD3_k127_5578093_1 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 439.0
BYD3_k127_5578093_2 PFAM SPFH domain Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 327.0
BYD3_k127_5578093_3 Insulinase (Peptidase family M16) - - - 0.00000000000000000111 87.0
BYD3_k127_5578093_5 - - - - 0.0000000000002782 72.0
BYD3_k127_5579726_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 6.309e-296 930.0
BYD3_k127_5579726_1 Domains REC, sigma54 interaction, HTH8 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 427.0
BYD3_k127_5579726_10 Evidence 5 No homology to any previously reported sequences K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.0000000000000000444 88.0
BYD3_k127_5579726_11 Methyltransferase domain - - - 0.000000000000001968 89.0
BYD3_k127_5579726_12 cellulase activity K01179,K01183,K13381,K20276 - 3.2.1.14,3.2.1.17,3.2.1.4 0.000004944 56.0
BYD3_k127_5579726_13 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00004502 56.0
BYD3_k127_5579726_14 PFAM ATP-binding region ATPase domain protein - - - 0.0000552 56.0
BYD3_k127_5579726_15 cellulose binding - - - 0.0005863 49.0
BYD3_k127_5579726_2 TIGRFAM polysaccharide deactylase family protein, PEP-CTERM locus subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009748 266.0
BYD3_k127_5579726_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000006697 282.0
BYD3_k127_5579726_4 PFAM ATP-binding region, ATPase domain protein K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000006301 224.0
BYD3_k127_5579726_5 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000005877 207.0
BYD3_k127_5579726_6 - - - - 0.0000000000000000000000000002869 126.0
BYD3_k127_5579726_7 Trypsin-like serine protease K01337 - 3.4.21.50 0.00000000000000000000000001408 121.0
BYD3_k127_5579726_8 Trypsin-like serine protease K01337 - 3.4.21.50 0.0000000000000000000008239 107.0
BYD3_k127_5579726_9 PFAM Uncharacterised protein family (UPF0164) - - - 0.0000000000000000003189 102.0
BYD3_k127_5587143_0 succinate dehydrogenase K00239 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4 9.678e-212 680.0
BYD3_k127_5587143_1 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000156 270.0
BYD3_k127_5591370_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 583.0
BYD3_k127_5591370_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 543.0
BYD3_k127_5591370_10 von Willebrand factor type A domain K07114 - - 0.0000000000000000000000000000000000000002602 170.0
BYD3_k127_5591370_11 Oxygen tolerance - - - 0.000000000000000000000000000000000000004235 168.0
BYD3_k127_5591370_12 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104,K01808,K07566,K20201 - 2.7.7.87,3.1.3.48,3.9.1.2,5.3.1.6 0.00000000000000000000001356 106.0
BYD3_k127_5591370_13 Telomere recombination K07566 - 2.7.7.87 0.0000000000000000004503 95.0
BYD3_k127_5591370_14 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000001105 79.0
BYD3_k127_5591370_15 - - - - 0.0000003416 62.0
BYD3_k127_5591370_16 KR domain - - - 0.0007365 43.0
BYD3_k127_5591370_17 Tetratricopeptide repeat - - - 0.0007479 51.0
BYD3_k127_5591370_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000437 537.0
BYD3_k127_5591370_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 546.0
BYD3_k127_5591370_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000712 394.0
BYD3_k127_5591370_5 ATPase associated with various cellular K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004792 397.0
BYD3_k127_5591370_6 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 381.0
BYD3_k127_5591370_7 von Willebrand factor (vWF) type A domain K07114,K12511 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009012 278.0
BYD3_k127_5591370_8 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001187 258.0
BYD3_k127_5591370_9 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000001307 169.0
BYD3_k127_5596716_0 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000000009396 201.0
BYD3_k127_5596716_1 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.00000000000000000000000000000000007247 145.0
BYD3_k127_5596716_2 peptidase A24A prepilin type IV K02278 - 3.4.23.43 0.00000000000000004044 88.0
BYD3_k127_5596716_3 TadE-like protein - - - 0.00000003849 64.0
BYD3_k127_5596716_4 Putative Tad-like Flp pilus-assembly - - - 0.00006094 49.0
BYD3_k127_5609739_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1073.0
BYD3_k127_5609739_1 involved in signal transduction (via phosphorylation) involved in transcriptional regulatory mechanism and in the regulation of secondary metabolites catalytic activity ATP a protein ADP a phosphoprotein K08282 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 523.0
BYD3_k127_5609739_10 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000008805 253.0
BYD3_k127_5609739_11 tRNA processing K06864 - - 0.000000000000000000000000000000000000000000000000000000000000536 234.0
BYD3_k127_5609739_12 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000001553 196.0
BYD3_k127_5609739_13 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000001197 196.0
BYD3_k127_5609739_14 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000005508 194.0
BYD3_k127_5609739_15 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000001932 185.0
BYD3_k127_5609739_16 metallopeptidase activity K01993,K13408,K16922 - - 0.00000000000000000000000000000000000000000000002551 198.0
BYD3_k127_5609739_17 - - - - 0.000000000000000000000000000000000000000003503 171.0
BYD3_k127_5609739_18 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000000000000000000000000000000000002667 156.0
BYD3_k127_5609739_19 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993,K16922 - - 0.000000000000000000000000000000000000004144 168.0
BYD3_k127_5609739_2 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 322.0
BYD3_k127_5609739_20 Endonuclease Exonuclease Phosphatase - - - 0.000000000000000000000000000000000007651 148.0
BYD3_k127_5609739_21 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000001616 140.0
BYD3_k127_5609739_22 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000001928 123.0
BYD3_k127_5609739_23 PFAM Surface antigen variable number repeat K07277 - - 0.000000000000000000000001426 119.0
BYD3_k127_5609739_24 long-chain fatty acid transport protein - - - 0.000000000000000000000008893 114.0
BYD3_k127_5609739_25 - - - - 0.00000000000000000000001976 112.0
BYD3_k127_5609739_26 extracellular matrix structural constituent - - - 0.0000000000000002889 94.0
BYD3_k127_5609739_27 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000000000000009649 84.0
BYD3_k127_5609739_28 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000004444 85.0
BYD3_k127_5609739_29 GTPase activator activity - - - 0.000000000002457 79.0
BYD3_k127_5609739_3 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007035 313.0
BYD3_k127_5609739_30 DinB family - - - 0.000000000006261 73.0
BYD3_k127_5609739_31 extracellular matrix structural constituent - - - 0.000000000006297 79.0
BYD3_k127_5609739_32 Uncharacterized protein family, UPF0114 - - - 0.000000003408 64.0
BYD3_k127_5609739_34 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000263 67.0
BYD3_k127_5609739_35 - - - - 0.00001035 48.0
BYD3_k127_5609739_36 DUF167 K09131 - - 0.00001306 56.0
BYD3_k127_5609739_37 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286 - - 0.0004358 51.0
BYD3_k127_5609739_4 Domain of unknown function (DUF3943) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004842 310.0
BYD3_k127_5609739_5 PFAM Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001116 285.0
BYD3_k127_5609739_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002946 262.0
BYD3_k127_5609739_7 ADP binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009232 282.0
BYD3_k127_5609739_8 Responsible for synthesis of pseudouridine from uracil K06177,K06180 GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 5.4.99.23,5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000004693 258.0
BYD3_k127_5609739_9 Bacterial regulatory protein, Fis family K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006668 267.0
BYD3_k127_5623166_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005358 587.0
BYD3_k127_5623166_1 MreB/Mbl protein K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 469.0
BYD3_k127_5623166_10 Alternative locus ID K01297 - 3.4.17.13 0.00000005122 56.0
BYD3_k127_5623166_11 rod shape-determining protein MreD K03571 - - 0.0000002972 63.0
BYD3_k127_5623166_2 Catalyzes cross-linking of the peptidoglycan cell wall K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006457 389.0
BYD3_k127_5623166_3 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008323 344.0
BYD3_k127_5623166_4 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005698 295.0
BYD3_k127_5623166_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000003378 213.0
BYD3_k127_5623166_6 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000001811 155.0
BYD3_k127_5623166_7 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000001169 151.0
BYD3_k127_5623166_8 proteolysis - - - 0.00000000000000000000000003708 122.0
BYD3_k127_5623166_9 PFAM Phosphoribosyl transferase domain - - - 0.0000000000000000000000001063 116.0
BYD3_k127_5636204_0 DNA topoisomerase II activity K02469 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007942 532.0
BYD3_k127_5636204_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 372.0
BYD3_k127_5636204_10 Lysin motif - - - 0.000000002149 70.0
BYD3_k127_5636204_11 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000001271 65.0
BYD3_k127_5636204_12 protein kinase activity K12132 - 2.7.11.1 0.0000003848 63.0
BYD3_k127_5636204_13 pectinesterase activity - - - 0.000001031 61.0
BYD3_k127_5636204_14 polygalacturonase activity - - - 0.000001364 61.0
BYD3_k127_5636204_2 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 348.0
BYD3_k127_5636204_3 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008407 295.0
BYD3_k127_5636204_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K03851,K15372 - 2.6.1.55,2.6.1.77 0.0000000000000000000000000000000000000000000000000000000000000000001425 247.0
BYD3_k127_5636204_5 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.0000000000000000000000000000000000000000000000000000000000000003223 227.0
BYD3_k127_5636204_6 Belongs to the peptidase S11 family K01286,K07258,K07262 GO:0000003,GO:0000270,GO:0000910,GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0006022,GO:0006508,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016043,GO:0016787,GO:0019538,GO:0019954,GO:0022402,GO:0022414,GO:0030203,GO:0032505,GO:0042221,GO:0042493,GO:0042597,GO:0043093,GO:0043170,GO:0044238,GO:0044464,GO:0045229,GO:0050896,GO:0051301,GO:0070011,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0140096,GO:1901135,GO:1901564 3.4.16.4 0.00000000000000000000000000000000000000000000000008233 190.0
BYD3_k127_5636204_7 EamA-like transporter family - - - 0.00000000000000000000000000000000004398 147.0
BYD3_k127_5636204_8 - - - - 0.000000000000000000000645 106.0
BYD3_k127_5636204_9 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000277 96.0
BYD3_k127_5647170_0 Malate synthase K01638 - 2.3.3.9 2.05e-233 734.0
BYD3_k127_5647170_1 Catalyzes the reversible formation of glyoxylate and succinate from isocitrate K01637 - 4.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007077 529.0
BYD3_k127_5647170_2 Pfam:DUF955 K07110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 520.0
BYD3_k127_5647170_3 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 473.0
BYD3_k127_5647170_4 ABC transporter, ATP-binding protein K01990 - - 0.000000000000000000000000000000000000000000000000000009412 194.0
BYD3_k127_5764414_0 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0004353 44.0
BYD3_k127_5852862_0 UDP binding domain K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 481.0
BYD3_k127_5852862_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 480.0
BYD3_k127_5852862_10 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 312.0
BYD3_k127_5852862_11 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000007516 256.0
BYD3_k127_5852862_12 Protein conserved in bacteria K06320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003488 255.0
BYD3_k127_5852862_13 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000003573 251.0
BYD3_k127_5852862_14 AIR carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000001281 230.0
BYD3_k127_5852862_15 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000002063 214.0
BYD3_k127_5852862_16 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000003653 221.0
BYD3_k127_5852862_17 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000107 192.0
BYD3_k127_5852862_18 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000139 198.0
BYD3_k127_5852862_19 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000005277 210.0
BYD3_k127_5852862_2 Polysaccharide biosynthesis protein K15856 - 1.1.1.281 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 423.0
BYD3_k127_5852862_20 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000001485 190.0
BYD3_k127_5852862_21 AAA domain, putative AbiEii toxin, Type IV TA system K16786,K16787 - - 0.0000000000000000000000000000000000000000000001506 193.0
BYD3_k127_5852862_22 PFAM lipopolysaccharide biosynthesis - - - 0.0000000000000000000000000000000000000000000002862 185.0
BYD3_k127_5852862_23 phosphatidate phosphatase activity - - - 0.0000000000000000000000000000000000000000000008533 174.0
BYD3_k127_5852862_24 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000001681 187.0
BYD3_k127_5852862_25 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( K02823 - - 0.0000000000000000000000000000000000000000097 165.0
BYD3_k127_5852862_26 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000001536 168.0
BYD3_k127_5852862_27 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000002184 164.0
BYD3_k127_5852862_28 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000005687 166.0
BYD3_k127_5852862_29 PFAM glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000001619 162.0
BYD3_k127_5852862_3 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 408.0
BYD3_k127_5852862_30 Glycosyl transferase, family 9 K02841,K02843,K02847,K02849,K21003 - - 0.000000000000000000000000000000000001808 154.0
BYD3_k127_5852862_31 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000006538 158.0
BYD3_k127_5852862_32 Polysaccharide biosynthesis/export protein - - - 0.0000000000000000000000000000000003038 153.0
BYD3_k127_5852862_33 Polysaccharide biosynthesis protein K03328 - - 0.00000000000000000000000000006604 132.0
BYD3_k127_5852862_34 Glycosyltransferase like family 2 - - - 0.0000000000000000000000002385 123.0
BYD3_k127_5852862_35 O-Antigen ligase - - - 0.0000000000000000000000003711 121.0
BYD3_k127_5852862_36 O-antigen polymerase - - - 0.00000000000000000003114 104.0
BYD3_k127_5852862_37 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000005985 103.0
BYD3_k127_5852862_38 Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway K15521 - 2.4.1.250 0.00000000000000000504 97.0
BYD3_k127_5852862_39 transferase activity, transferring glycosyl groups - - - 0.000000000001064 81.0
BYD3_k127_5852862_4 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 399.0
BYD3_k127_5852862_40 - - - - 0.000000000002813 80.0
BYD3_k127_5852862_41 Membrane protein involved in the export of O-antigen and teichoic acid K03328 - - 0.00003041 56.0
BYD3_k127_5852862_5 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008348 392.0
BYD3_k127_5852862_6 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 379.0
BYD3_k127_5852862_7 undecaprenyl-phosphate glucose phosphotransferase activity K03606,K20997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 363.0
BYD3_k127_5852862_8 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 327.0
BYD3_k127_5852862_9 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 303.0
BYD3_k127_5862345_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0002682,GO:0002684,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006950,GO:0008150,GO:0009314,GO:0009380,GO:0009605,GO:0009607,GO:0009628,GO:0016020,GO:0032991,GO:0035821,GO:0042802,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 2.109e-260 826.0
BYD3_k127_5862345_1 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009327 327.0
BYD3_k127_5862345_10 acetyltransferase - - - 0.00000000000000000000008452 113.0
BYD3_k127_5862345_11 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.000001265 51.0
BYD3_k127_5862345_2 Dioxygenase K00449 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002613 286.0
BYD3_k127_5862345_3 Belongs to the NadC ModD family K00278,K00767 GO:0003674,GO:0003824,GO:0004514,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016020,GO:0016054,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0030312,GO:0034213,GO:0034641,GO:0034654,GO:0042737,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0072526,GO:0090407,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 1.4.3.16,2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000001164 247.0
BYD3_k127_5862345_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000009801 215.0
BYD3_k127_5862345_5 membrane - - - 0.0000000000000000000000000000000000000000000000000000000653 201.0
BYD3_k127_5862345_6 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000001161 197.0
BYD3_k127_5862345_7 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009266,GO:0009295,GO:0009408,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016465,GO:0030312,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0042026,GO:0042262,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043388,GO:0043590,GO:0044093,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0050896,GO:0051082,GO:0051098,GO:0051099,GO:0051101,GO:0051716,GO:0061077,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090143,GO:0090304,GO:0097159,GO:0101031,GO:1901360,GO:1901363,GO:1990220,GO:2000677,GO:2000679 - 0.0000000000000000000000000000000000000000000005885 168.0
BYD3_k127_5862345_8 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.00000000000000000000000000000000001813 153.0
BYD3_k127_5862345_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000004513 131.0
BYD3_k127_5869408_0 Phosphatase - - - 0.000000000000000000000001424 120.0
BYD3_k127_5869408_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.000000000000000000000001901 106.0
BYD3_k127_5870471_0 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000399 465.0
BYD3_k127_5874026_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 7.744e-249 808.0
BYD3_k127_5874026_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 588.0
BYD3_k127_5874026_2 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008872 577.0
BYD3_k127_5874026_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 432.0
BYD3_k127_5874026_4 PFAM Ribonuclease BN-like family K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 293.0
BYD3_k127_5874026_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003351 287.0
BYD3_k127_5874026_6 isoprenylcysteine carboxyl methyltransferase - - - 0.0000000000000000000000000000000000000001929 158.0
BYD3_k127_5874026_7 - - - - 0.0000000000000000000000000000000000000002195 157.0
BYD3_k127_5880895_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 0.0 1407.0
BYD3_k127_5880895_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 539.0
BYD3_k127_5880895_10 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003549 275.0
BYD3_k127_5880895_11 COG0491 Zn-dependent hydrolases, including glyoxylases K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000003 233.0
BYD3_k127_5880895_12 cytochrome c oxidase subunit III K02276 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000005618 236.0
BYD3_k127_5880895_13 FMN binding - - - 0.00000000000000000000000000000000000000000000000000000000000003224 223.0
BYD3_k127_5880895_14 hydrolase (HAD superfamily) K01560,K07025,K08723 - 3.1.3.5,3.8.1.2 0.00000000000000000000000000000000000000000000000000000006072 213.0
BYD3_k127_5880895_15 Alpha beta hydrolase fold protein - - - 0.000000000000000000000000000000000000000002662 167.0
BYD3_k127_5880895_16 PFAM Acetyltransferase (GNAT) family K03790 - 2.3.1.128 0.0000000000000000000000000000000005396 139.0
BYD3_k127_5880895_17 Tetratricopeptide repeat - - - 0.00000000000000000000000006394 121.0
BYD3_k127_5880895_18 Trypsin-like serine protease K01337 - 3.4.21.50 0.0000000003911 67.0
BYD3_k127_5880895_19 AcrB/AcrD/AcrF family K03296 - - 0.000000003716 70.0
BYD3_k127_5880895_2 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 538.0
BYD3_k127_5880895_20 Tetratricopeptide TPR_2 repeat protein - - - 0.000003258 60.0
BYD3_k127_5880895_21 - - - - 0.00001053 55.0
BYD3_k127_5880895_22 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0001175 47.0
BYD3_k127_5880895_3 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 520.0
BYD3_k127_5880895_4 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005213 507.0
BYD3_k127_5880895_5 smart pdz dhr glgf K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 378.0
BYD3_k127_5880895_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 375.0
BYD3_k127_5880895_7 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 347.0
BYD3_k127_5880895_8 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 322.0
BYD3_k127_5880895_9 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008197 281.0
BYD3_k127_5895423_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 499.0
BYD3_k127_5895423_1 Glycosyl transferases group 1 K06320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 483.0
BYD3_k127_5895423_2 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000682 385.0
BYD3_k127_5895423_3 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 390.0
BYD3_k127_5895423_4 ethanolamine kinase activity K07251 - 2.7.1.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008631 306.0
BYD3_k127_5895423_5 Histidine phosphatase superfamily (branch 1) - - - 0.0000000000000000000000000000000000000000000000008757 182.0
BYD3_k127_5895423_6 HWE histidine kinase - - - 0.0000000000000000000000000000000000000000000002489 175.0
BYD3_k127_5895423_7 hyperosmotic response - - - 0.00000000000000000000000000008013 126.0
BYD3_k127_5908343_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 1.929e-208 664.0
BYD3_k127_5908343_1 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000916 465.0
BYD3_k127_5909141_0 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 606.0
BYD3_k127_5909141_1 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008408 568.0
BYD3_k127_5909141_10 2-phosphosulpholactate phosphatase K05979 - 3.1.3.71 0.000000000000000000000000000000000000000000000008702 184.0
BYD3_k127_5909141_11 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000002493 163.0
BYD3_k127_5909141_12 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000004527 156.0
BYD3_k127_5909141_13 Acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571,K01960 - 4.1.1.3,6.4.1.1 0.000000000000000000000000000000001144 141.0
BYD3_k127_5909141_14 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000271 124.0
BYD3_k127_5909141_15 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051603,GO:0061077,GO:0070011,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.107 0.00000000000001738 87.0
BYD3_k127_5909141_16 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000001861 58.0
BYD3_k127_5909141_17 COG0457 FOG TPR repeat - - - 0.00000009306 65.0
BYD3_k127_5909141_18 Anti-sigma-K factor rskA - - - 0.000003635 58.0
BYD3_k127_5909141_19 Methyltransferase, chemotaxis proteins K13486 - - 0.00006956 54.0
BYD3_k127_5909141_2 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 579.0
BYD3_k127_5909141_3 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 406.0
BYD3_k127_5909141_4 Permease YjgP YjgQ family protein K07091,K11720 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000983 308.0
BYD3_k127_5909141_5 Peptidase M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000147 273.0
BYD3_k127_5909141_6 Participates in both transcription termination and antitermination K02600 GO:0001000,GO:0001121,GO:0001125,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000003708 248.0
BYD3_k127_5909141_7 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000006777 246.0
BYD3_k127_5909141_8 Permease YjgP YjgQ K11720 - - 0.000000000000000000000000000000000000000000000000000000000008338 229.0
BYD3_k127_5909141_9 ribonuclease III activity K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000001971 198.0
BYD3_k127_5916488_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 3.439e-211 692.0
BYD3_k127_5916488_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 489.0
BYD3_k127_5916488_10 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000009123 231.0
BYD3_k127_5916488_11 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000002213 205.0
BYD3_k127_5916488_12 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000001014 186.0
BYD3_k127_5916488_13 isomerase K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000003811 193.0
BYD3_k127_5916488_14 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000005791 175.0
BYD3_k127_5916488_15 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000001032 183.0
BYD3_k127_5916488_16 MafB19-like deaminase K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000009272 170.0
BYD3_k127_5916488_17 Roadblock/LC7 domain - - - 0.00000000000000000000000000000000002872 142.0
BYD3_k127_5916488_18 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000003369 149.0
BYD3_k127_5916488_19 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000002813 127.0
BYD3_k127_5916488_2 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 462.0
BYD3_k127_5916488_20 SpoVG K06412 - - 0.0000000000000000000000000009522 114.0
BYD3_k127_5916488_21 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000001875 125.0
BYD3_k127_5916488_22 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000007467 102.0
BYD3_k127_5916488_23 PFAM phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.0000000000000000000000379 112.0
BYD3_k127_5916488_24 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000008527 108.0
BYD3_k127_5916488_25 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000005583 89.0
BYD3_k127_5916488_26 RecX family K03565 - - 0.000000000000004513 81.0
BYD3_k127_5916488_27 Peptidylprolyl isomerase K01802,K03769 - 5.2.1.8 0.00000000000002107 88.0
BYD3_k127_5916488_28 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000008742 67.0
BYD3_k127_5916488_29 LppC putative lipoprotein K07121 - - 0.000003296 60.0
BYD3_k127_5916488_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 GO:0003674,GO:0003824,GO:0004749,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000699 391.0
BYD3_k127_5916488_30 Putative bacterial lipoprotein (DUF799) - - - 0.000003366 57.0
BYD3_k127_5916488_31 Recombinase zinc beta ribbon domain - - - 0.000006564 58.0
BYD3_k127_5916488_32 Resolvase - - - 0.00002664 56.0
BYD3_k127_5916488_4 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009317 374.0
BYD3_k127_5916488_5 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005708 287.0
BYD3_k127_5916488_6 Belongs to the CinA family K03742 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009306 294.0
BYD3_k127_5916488_7 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000003647 260.0
BYD3_k127_5916488_8 UbiA prenyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000331 269.0
BYD3_k127_5916488_9 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000001018 241.0
BYD3_k127_5929057_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.418e-255 854.0
BYD3_k127_5929057_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009017 430.0
BYD3_k127_5929057_10 Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation K09811 - - 0.000000000000001365 91.0
BYD3_k127_5929057_11 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000007542 59.0
BYD3_k127_5929057_2 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005433 327.0
BYD3_k127_5929057_3 Cobyrinic acid ac-diamide synthase K03496 GO:0008150,GO:0022603,GO:0042173,GO:0042174,GO:0043937,GO:0043939,GO:0045595,GO:0045596,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0065007 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 308.0
BYD3_k127_5929057_4 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000009236 238.0
BYD3_k127_5929057_5 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000007166 226.0
BYD3_k127_5929057_6 Peptidase family M23 K21471 GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.0000000000000000000000000000000000000000000000000007443 205.0
BYD3_k127_5929057_7 ABC transporter K09812 GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0008356,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0032506,GO:0042173,GO:0043937,GO:0043938,GO:0044085,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:1902531 - 0.00000000000000000000000000000000000000000000000001749 189.0
BYD3_k127_5929057_8 PPIC-type PPIASE domain K03769,K03771,K07533 - 5.2.1.8 0.0000000000000000000000000000000000000000003774 183.0
BYD3_k127_5929057_9 Aerotolerance regulator N-terminal - - - 0.000000000000000000000000000000001448 150.0
BYD3_k127_5931711_0 Phosphoenolpyruvate phosphomutase K01637 - 4.1.3.1 4.748e-212 665.0
BYD3_k127_5931711_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 448.0
BYD3_k127_5931711_2 beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000001519 201.0
BYD3_k127_5931711_3 converts alpha-aldose to the beta-anomer - - - 0.00000000000000000000000000000000000000000008882 173.0
BYD3_k127_5935278_0 von Willebrand factor (vWF) type A domain K07114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 407.0
BYD3_k127_5935278_1 Peptidase, S8 S53 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003613 300.0
BYD3_k127_5935278_2 A G-specific K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009456 265.0
BYD3_k127_5935278_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000005462 255.0
BYD3_k127_5935278_4 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000003083 236.0
BYD3_k127_5935278_5 Squalene/phytoene synthase - - - 0.0000000000000000000000000000000000000000000000000000002709 205.0
BYD3_k127_5935278_6 squalene-associated FAD-dependent desaturase K21677 - 1.17.8.1 0.000000000000000000000000000000000000000000000002057 192.0
BYD3_k127_5935278_7 Belongs to the peptidase S8 family - - - 0.00000000000000002306 97.0
BYD3_k127_5935278_8 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000001074 61.0
BYD3_k127_5952179_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 456.0
BYD3_k127_5952179_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 453.0
BYD3_k127_5952179_2 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000001609 104.0
BYD3_k127_5998487_0 DNA helicase K03654 - 3.6.4.12 1.681e-204 655.0
BYD3_k127_5998487_1 Involved in the tonB-independent uptake of proteins - - - 1.541e-202 657.0
BYD3_k127_5998487_10 Protein of unknown function (DUF1569) - - - 0.00000000000000000000000000000000000002247 150.0
BYD3_k127_5998487_11 alginic acid biosynthetic process - - - 0.00000000000000000000000000000000002084 158.0
BYD3_k127_5998487_12 Cold shock protein K03704 - - 0.0000000000000000000000000006703 113.0
BYD3_k127_5998487_13 DinB superfamily - - - 0.00000000000000000000001476 112.0
BYD3_k127_5998487_14 domain, Protein - - - 0.000000000000000001201 102.0
BYD3_k127_5998487_15 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000003421 87.0
BYD3_k127_5998487_16 Domain of unknown function (DUF4332) - - - 0.000000000000004707 85.0
BYD3_k127_5998487_17 multi-organism process K03195 - - 0.000000000002912 76.0
BYD3_k127_5998487_18 Domain of unknown function (DUF4332) - - - 0.00000000006987 71.0
BYD3_k127_5998487_19 Protein conserved in bacteria - - - 0.00000004492 67.0
BYD3_k127_5998487_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006014 483.0
BYD3_k127_5998487_20 SnoaL-like domain - - - 0.000004013 57.0
BYD3_k127_5998487_22 amino acid activation for nonribosomal peptide biosynthetic process K05996 - 3.4.17.18 0.0001991 55.0
BYD3_k127_5998487_3 methyltransferase K09846 - 2.1.1.210 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006885 467.0
BYD3_k127_5998487_4 peptidase activity, acting on L-amino acid peptides K07004,K09955 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005818 423.0
BYD3_k127_5998487_5 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 308.0
BYD3_k127_5998487_6 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 331.0
BYD3_k127_5998487_7 cAMP biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003969 298.0
BYD3_k127_5998487_8 Pyridoxamine 5'-phosphate oxidase K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000003566 256.0
BYD3_k127_5998487_9 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000002847 206.0
BYD3_k127_6009857_0 Insulinase (Peptidase family M16) K07263 - - 1.896e-288 915.0
BYD3_k127_6009857_1 Putative zinc-binding metallo-peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 411.0
BYD3_k127_6009857_2 ATP-grasp domain K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 397.0
BYD3_k127_6009857_3 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 306.0
BYD3_k127_6009857_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K16066 - 1.1.1.381 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005256 275.0
BYD3_k127_6009857_5 DNA restriction-modification system K07317 - 2.1.1.72 0.000000000000000000000000000000000000000000591 171.0
BYD3_k127_6009857_6 Cold shock protein K03704 - - 0.0000000000000000000000000001096 118.0
BYD3_k127_6009857_7 thiolester hydrolase activity K01055,K02170 - 3.1.1.24,3.1.1.85 0.000000000000001694 90.0
BYD3_k127_6015898_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 491.0
BYD3_k127_6015898_1 PolyA polymerase K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008019 416.0
BYD3_k127_6015898_2 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 301.0
BYD3_k127_6015898_3 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000001392 254.0
BYD3_k127_6015898_4 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000001175 238.0
BYD3_k127_6015898_5 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000001339 123.0
BYD3_k127_6065891_0 dna ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 456.0
BYD3_k127_6065891_1 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 308.0
BYD3_k127_6065891_2 ABC-2 family transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001009 241.0
BYD3_k127_6065891_3 - - - - 0.0000000000000000000000000000000000000000000000000000008631 213.0
BYD3_k127_6065891_4 Helix-hairpin-helix domain K04477 - - 0.0000000000000000000000000000000000000000000000000004589 198.0
BYD3_k127_6065891_5 - - - - 0.00000000000000000000000000000000000000000002698 167.0
BYD3_k127_6065891_6 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000001224 162.0
BYD3_k127_6065891_7 ATP dependent DNA ligase C terminal region - - - 0.0000000000000000000000000000000000000001611 167.0
BYD3_k127_6065891_8 AntiSigma factor - - - 0.00000000000000000000000000000048 134.0
BYD3_k127_6084469_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 2.735e-254 820.0
BYD3_k127_6084469_1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 563.0
BYD3_k127_6084469_10 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009634 383.0
BYD3_k127_6084469_11 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008224 303.0
BYD3_k127_6084469_12 Belongs to the peptidase S51 family - - - 0.000000000000000000000000000000000000000000000000004557 193.0
BYD3_k127_6084469_13 - - - - 0.0000000000000000000000000008549 114.0
BYD3_k127_6084469_14 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00000005049 61.0
BYD3_k127_6084469_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000752 516.0
BYD3_k127_6084469_3 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005997 488.0
BYD3_k127_6084469_4 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006108 492.0
BYD3_k127_6084469_5 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006025 485.0
BYD3_k127_6084469_6 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 472.0
BYD3_k127_6084469_7 Putative esterase K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 453.0
BYD3_k127_6084469_8 glutamate--cysteine ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 430.0
BYD3_k127_6084469_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 404.0
BYD3_k127_6098121_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043,K13797 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 2.47e-322 1014.0
BYD3_k127_6098121_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005703 293.0
BYD3_k127_6098121_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010467,GO:0015934,GO:0015968,GO:0016043,GO:0019538,GO:0019843,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0032984,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0042594,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0065003,GO:0070925,GO:0071496,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000003502 218.0
BYD3_k127_6098121_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000009195 194.0
BYD3_k127_6098121_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000009107 156.0
BYD3_k127_6098121_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000295 158.0
BYD3_k127_6098121_6 Ribosomal protein L33 - - - 0.00000000000008185 71.0
BYD3_k127_6098121_7 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000004236 59.0
BYD3_k127_6131010_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 1.586e-203 668.0
BYD3_k127_6131010_1 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 578.0
BYD3_k127_6131010_2 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000001606 273.0
BYD3_k127_6131010_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000007408 179.0
BYD3_k127_6131010_4 Histidine kinase K14986 - 2.7.13.3 0.00000000000000000000000000000000000004613 160.0
BYD3_k127_6131010_5 PFAM phosphoesterase, PA-phosphatase related K19302 - 3.6.1.27 0.0000000000000003183 90.0
BYD3_k127_6131010_6 Amidohydrolase family - - - 0.00000001106 59.0
BYD3_k127_6131010_7 Protein kinase domain - - - 0.0007376 51.0
BYD3_k127_6187177_0 helicase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 492.0
BYD3_k127_6187177_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000619 452.0
BYD3_k127_6187177_2 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008058 426.0
BYD3_k127_6187177_3 Belongs to the glycosyl hydrolase 57 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009564 447.0
BYD3_k127_6187177_4 Belongs to the 'phage' integrase family K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000004974 252.0
BYD3_k127_6187177_5 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000000003884 119.0
BYD3_k127_6187177_6 rRNA binding K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000001309 62.0
BYD3_k127_6187177_7 Psort location CytoplasmicMembrane, score - - - 0.0000002443 58.0
BYD3_k127_6187177_8 protein trimerization K15368 - - 0.00000215 58.0
BYD3_k127_6193916_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006139 498.0
BYD3_k127_6193916_1 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 354.0
BYD3_k127_6193916_10 AsmA-like C-terminal region - - - 0.0009338 53.0
BYD3_k127_6193916_2 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 333.0
BYD3_k127_6193916_3 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001083 286.0
BYD3_k127_6193916_4 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000007959 230.0
BYD3_k127_6193916_5 KR domain - - - 0.000000000000000000000000000000000000000000000258 175.0
BYD3_k127_6193916_6 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000001529 153.0
BYD3_k127_6193916_7 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.000000000000000000002242 100.0
BYD3_k127_6193916_8 Tetratricopeptide repeat - - - 0.00000000000000000002499 98.0
BYD3_k127_6193916_9 C4-type zinc ribbon domain K07164 - - 0.0000002176 59.0
BYD3_k127_6198992_0 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000002688 195.0
BYD3_k127_6198992_1 domain protein K01183,K01990,K03466,K08372 GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009405,GO:0016020,GO:0019867,GO:0030260,GO:0030312,GO:0030313,GO:0031975,GO:0044403,GO:0044409,GO:0044419,GO:0044462,GO:0044464,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0071944 3.2.1.14 0.000000000000000000000000000000000000009277 163.0
BYD3_k127_6198992_10 - - - - 0.0005888 50.0
BYD3_k127_6198992_11 Membrane - - - 0.0009007 49.0
BYD3_k127_6198992_2 EVE domain - - - 0.0000000000000000000000000000000000000309 150.0
BYD3_k127_6198992_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000008566 119.0
BYD3_k127_6198992_4 Transglycosylase associated protein - - - 0.0000000000000000000000008516 110.0
BYD3_k127_6198992_5 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000001984 107.0
BYD3_k127_6198992_6 Transposase - - - 0.000000000000000000000004135 113.0
BYD3_k127_6198992_7 gluconolactonase activity K01053,K01179,K07214,K12287 - 3.1.1.17,3.2.1.4 0.00000000000000000000003904 115.0
BYD3_k127_6198992_8 protein secretion - - - 0.00000003849 66.0
BYD3_k127_6198992_9 Surface antigen - - - 0.00009693 53.0
BYD3_k127_6216985_0 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 419.0
BYD3_k127_6216985_1 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007583 344.0
BYD3_k127_6216985_2 Protein of unknown function (DUF2905) - - - 0.0000000000001071 73.0
BYD3_k127_6232128_0 KaiC K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007012 468.0
BYD3_k127_6232128_1 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 437.0
BYD3_k127_6232128_2 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009542 299.0
BYD3_k127_6232128_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000161 263.0
BYD3_k127_6232128_4 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000001131 247.0
BYD3_k127_6232128_5 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008270,GO:0008685,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016849,GO:0030145,GO:0042180,GO:0042181,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.6.1.12 0.00000000000000000000000000000000000000000000000002569 186.0
BYD3_k127_6232128_6 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0000166,GO:0000287,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016020,GO:0016114,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0032787,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044464,GO:0046490,GO:0046872,GO:0046914,GO:0050518,GO:0051483,GO:0051484,GO:0070567,GO:0071704,GO:0071944,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901576 2.7.7.60 0.0000000000000000000000000000000000005081 149.0
BYD3_k127_6232128_7 Mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000002333 140.0
BYD3_k127_6232128_8 MlaD protein K02067 - - 0.000000000000000000009704 104.0
BYD3_k127_6245544_0 Glycosyltransferase Family 4 K13668 - 2.4.1.346 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 325.0
BYD3_k127_6245544_1 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000964 285.0
BYD3_k127_6245544_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000889 87.0
BYD3_k127_6346037_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 6.996e-252 792.0
BYD3_k127_6346037_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531 470.0
BYD3_k127_6346037_10 Ribosomal protein S21 K02970 - - 0.000000000000001066 78.0
BYD3_k127_6346037_11 - - - - 0.000000000002604 76.0
BYD3_k127_6346037_2 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 430.0
BYD3_k127_6346037_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0000988,GO:0000989,GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010556,GO:0015035,GO:0015036,GO:0016020,GO:0016032,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0016989,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031326,GO:0032991,GO:0034641,GO:0034645,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0055114,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0140096,GO:0140110,GO:1901360,GO:1901576,GO:1903506,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 372.0
BYD3_k127_6346037_4 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 347.0
BYD3_k127_6346037_5 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000007884 253.0
BYD3_k127_6346037_6 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000928 226.0
BYD3_k127_6346037_7 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000001088 160.0
BYD3_k127_6346037_8 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000008339 119.0
BYD3_k127_6346037_9 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000003221 115.0
BYD3_k127_6347691_0 Enoyl-CoA hydratase/isomerase K01661 - 4.1.3.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005997 436.0
BYD3_k127_6347691_1 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 292.0
BYD3_k127_6347691_2 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.0000000000000000000000000000000000000000000000000000002424 208.0
BYD3_k127_6347691_3 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.0000000000000000000000000000000001118 151.0
BYD3_k127_6347691_4 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.00000000000000000001176 94.0
BYD3_k127_6352418_0 Cell wall formation K00075 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008762,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0055114,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 1.3.1.98 0.000000000000000000000000000000000000000000000738 175.0
BYD3_k127_6352418_1 - - - - 0.00000000000000000000000000000001559 134.0
BYD3_k127_6352418_2 - - - - 0.0000000000000003139 84.0
BYD3_k127_6352418_3 - - - - 0.00000000000001308 78.0
BYD3_k127_6352418_4 Involved in the tonB-independent uptake of proteins - - - 0.00009791 50.0
BYD3_k127_6453201_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 495.0
BYD3_k127_6453201_1 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 425.0
BYD3_k127_6453201_2 7TM receptor with intracellular HD hydrolase K07037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 389.0
BYD3_k127_6453201_3 PFAM PhoH family protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 339.0
BYD3_k127_6453201_4 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000001422 186.0
BYD3_k127_6453201_5 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000521 154.0
BYD3_k127_6453201_6 Involved in DNA repair and RecF pathway recombination K03584 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000001833 108.0
BYD3_k127_6453201_7 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K01489,K07042 - 3.5.4.5 0.00000000000000000003019 98.0
BYD3_k127_6453201_8 protein containing LysM domain - - - 0.0000000006788 70.0
BYD3_k127_6461786_0 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002047 292.0
BYD3_k127_6461786_1 Belongs to the 5'-nucleotidase family K01081,K11751 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000002014 262.0
BYD3_k127_6461786_2 Probable zinc-ribbon domain - - - 0.00000000000000000000000000001582 123.0
BYD3_k127_6461786_3 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000329 113.0
BYD3_k127_6461786_4 Cold-shock protein K03704 - - 0.000000000000000005537 86.0
BYD3_k127_6461786_5 Domain of unknown function (DUF4139) - - - 0.0000000000000006129 80.0
BYD3_k127_6468426_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 414.0
BYD3_k127_6468426_1 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 322.0
BYD3_k127_6468426_2 nitronate monooxygenase activity K02371 - 1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 327.0
BYD3_k127_6468426_3 - - - - 0.0000000000000000000000000000000005591 148.0
BYD3_k127_6468426_4 Ribonuclease H K03469 - 3.1.26.4 0.00000000000000000000000007926 119.0
BYD3_k127_6468426_5 Beta-lactamase - - - 0.00000000000000000000000983 111.0
BYD3_k127_6468426_6 - - - - 0.0000000000000000005094 93.0
BYD3_k127_6477660_0 Polysaccharide biosynthesis/export protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 441.0
BYD3_k127_6477660_1 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007845 367.0
BYD3_k127_6477660_2 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005069 342.0
BYD3_k127_6477660_3 Cupin superfamily (DUF985) K09705 - - 0.00000000000000000000000000000000000000000000009174 170.0
BYD3_k127_6477660_5 - - - - 0.00000000008465 70.0
BYD3_k127_6477660_6 cellulase activity K01179,K01361,K13277,K21449 - 3.2.1.4,3.4.21.96 0.0000002289 62.0
BYD3_k127_6506593_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0 1075.0
BYD3_k127_6506593_1 phosphopyruvate hydratase activity K01689 GO:0001968,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043236,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050840,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 572.0
BYD3_k127_6506593_2 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 562.0
BYD3_k127_6506593_3 TIGRFAM methyltransferase FkbM family - - - 0.0000000000000000000000000000000000002149 156.0
BYD3_k127_6506593_4 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000002143 136.0
BYD3_k127_6506593_6 Putative zinc-finger - - - 0.000001364 60.0
BYD3_k127_6506593_7 - - - - 0.0001115 56.0
BYD3_k127_6513691_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.773e-194 622.0
BYD3_k127_6513691_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008132 284.0
BYD3_k127_6513691_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.00000000000000000000000000000000000000002672 163.0
BYD3_k127_6513691_3 Bacterial Ig-like domain - - - 0.0000004105 60.0
BYD3_k127_6517326_0 MMPL family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005055 401.0
BYD3_k127_6517326_1 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005458 353.0
BYD3_k127_6517326_2 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009669 307.0
BYD3_k127_6517326_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000007761 123.0
BYD3_k127_6517326_4 ECF sigma factor K03088 - - 0.00000000000000000000000000001245 125.0
BYD3_k127_6551150_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005349 473.0
BYD3_k127_6551150_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 398.0
BYD3_k127_6551150_2 FlgD Ig-like domain K15924 - 3.2.1.136 0.00000000000000000000000000000000000000000008395 184.0
BYD3_k127_6551150_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0004140,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032552,GO:0032553,GO:0032554,GO:0032557,GO:0032558,GO:0032564,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000004978 135.0
BYD3_k127_6551150_4 amino acid activation for nonribosomal peptide biosynthetic process K17713 - - 0.00000000000000000000000441 117.0
BYD3_k127_6572854_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004262 470.0
BYD3_k127_6572854_1 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 380.0
BYD3_k127_6572854_10 AI-2E family transporter - - - 0.00000000000000000000000000000000001303 151.0
BYD3_k127_6572854_11 negative regulation of translational initiation K05554,K15885 - - 0.0000000000000000000000000000000002406 136.0
BYD3_k127_6572854_12 Belongs to the phosphoglycerate mutase family K22305 - 3.1.3.3 0.000000000000000000000000001971 128.0
BYD3_k127_6572854_14 Periplasmic component of the Tol biopolymer transport system - - - 0.000000000000000000000001617 116.0
BYD3_k127_6572854_15 Protein of unknown function (DUF1579) - - - 0.000000000000000000002596 106.0
BYD3_k127_6572854_2 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 392.0
BYD3_k127_6572854_3 peroxisomal (S)-2-hydroxy-acid oxidase K11517 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 378.0
BYD3_k127_6572854_4 Carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 327.0
BYD3_k127_6572854_5 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001136 277.0
BYD3_k127_6572854_6 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000007081 254.0
BYD3_k127_6572854_7 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000000000000000000000000000000000000000000000009767 237.0
BYD3_k127_6572854_8 Belongs to the peptidase S8 family K14645 - - 0.00000000000000000000000000000000000000000000000000000005939 220.0
BYD3_k127_6572854_9 DinB family - - - 0.0000000000000000000000000000000000000000000000004003 200.0
BYD3_k127_6605958_0 dehydrogenase e1 component K00164 - 1.2.4.2 0.0 1118.0
BYD3_k127_6605958_1 converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA - - - 4.804e-294 920.0
BYD3_k127_6605958_10 Trypsin - - - 0.000000000000000000000000000000000001189 160.0
BYD3_k127_6605958_11 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000001984 105.0
BYD3_k127_6605958_13 Membrane - - - 0.000007319 55.0
BYD3_k127_6605958_2 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) K00382 - 1.8.1.4 1.651e-199 632.0
BYD3_k127_6605958_3 Aldehyde dehydrogenase family K00128,K00135 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 580.0
BYD3_k127_6605958_4 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00627,K00658 - 2.3.1.12,2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007772 452.0
BYD3_k127_6605958_5 ABC transporter K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 430.0
BYD3_k127_6605958_6 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 397.0
BYD3_k127_6605958_7 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009112 406.0
BYD3_k127_6605958_8 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009791 375.0
BYD3_k127_6605958_9 Sulfate permease family K03321 - - 0.0000000000000000000000000000000000000002306 151.0
BYD3_k127_6664102_0 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000302 143.0
BYD3_k127_6664102_1 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000003041 74.0
BYD3_k127_6664102_2 aminopeptidase N - - - 0.000000001584 70.0
BYD3_k127_6772190_0 Glycosyl transferases group 1 K13057 - 2.4.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 407.0
BYD3_k127_6772190_1 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 377.0
BYD3_k127_6772190_2 LysE type translocator - - - 0.000000000000000000000000000000000000000001837 164.0
BYD3_k127_6772190_3 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000001352 123.0
BYD3_k127_6772190_5 Conserved TM helix - - - 0.0000000006164 68.0
BYD3_k127_6772190_6 Belongs to the glycosyl hydrolase 57 family - - - 0.00001606 56.0
BYD3_k127_6791718_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 306.0
BYD3_k127_6791718_1 Calcineurin-like phosphoesterase K03547 - - 0.0000000000000000000000000000000000000000000000000004665 195.0
BYD3_k127_6791718_2 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000002391 198.0
BYD3_k127_6791718_3 AAA domain - - - 0.0000000000000000000000000000000000000000004461 181.0
BYD3_k127_6827708_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 495.0
BYD3_k127_6827708_1 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 404.0
BYD3_k127_6827708_10 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.00000000000000000000000000000000009518 142.0
BYD3_k127_6827708_11 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000005669 117.0
BYD3_k127_6827708_12 PFAM regulatory protein, ArsR K03892 - - 0.0000000000000000000000003879 109.0
BYD3_k127_6827708_13 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000000000000002477 106.0
BYD3_k127_6827708_14 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000235 100.0
BYD3_k127_6827708_15 extracellular matrix structural constituent - - - 0.00000000000000000003157 106.0
BYD3_k127_6827708_16 - - - - 0.000000000000000000218 95.0
BYD3_k127_6827708_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 371.0
BYD3_k127_6827708_3 Pfam Ion transport protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004302 353.0
BYD3_k127_6827708_4 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 341.0
BYD3_k127_6827708_5 glycosyl hydrolase, BNR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005487 300.0
BYD3_k127_6827708_6 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005098 270.0
BYD3_k127_6827708_7 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000001542 177.0
BYD3_k127_6827708_8 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000000000003682 165.0
BYD3_k127_6827708_9 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000004429 145.0
BYD3_k127_6829192_0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 610.0
BYD3_k127_6829192_1 DNA polymerase K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008483 536.0
BYD3_k127_6829192_10 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008903 262.0
BYD3_k127_6829192_11 Pyridine nucleotide-disulphide oxidoreductase K00384,K03387,K21567 - 1.18.1.2,1.19.1.1,1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000008942 243.0
BYD3_k127_6829192_12 Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003,K09810 - - 0.00000000000000000000000000000000000000000000000000000008018 205.0
BYD3_k127_6829192_13 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000005978 201.0
BYD3_k127_6829192_14 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000193 211.0
BYD3_k127_6829192_15 peptidase - - - 0.00000000000000000000000000000000000000000000000003453 205.0
BYD3_k127_6829192_16 YceI-like domain - - - 0.0000000000000000000000000000000000000000000001547 176.0
BYD3_k127_6829192_17 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000572 148.0
BYD3_k127_6829192_18 PAS fold - - - 0.00000000000000000000000000000000324 148.0
BYD3_k127_6829192_19 pfam nudix K03574 - 3.6.1.55 0.00000000000000000000000001247 113.0
BYD3_k127_6829192_2 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 404.0
BYD3_k127_6829192_20 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.00000000000000000000000003124 116.0
BYD3_k127_6829192_21 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000007238 98.0
BYD3_k127_6829192_22 MacB-like periplasmic core domain K02004 - - 0.0000003791 59.0
BYD3_k127_6829192_3 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 399.0
BYD3_k127_6829192_4 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 350.0
BYD3_k127_6829192_5 Putative modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 377.0
BYD3_k127_6829192_6 Zn-dependent proteases and their inactivated homologs K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 313.0
BYD3_k127_6829192_7 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 293.0
BYD3_k127_6829192_8 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000003186 264.0
BYD3_k127_6829192_9 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008907 261.0
BYD3_k127_6832492_0 Belongs to the ABC transporter superfamily K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 417.0
BYD3_k127_6832492_1 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K15581 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0016020,GO:0022857,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 398.0
BYD3_k127_6832492_2 Binding-protein-dependent transport system inner membrane component K15582 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 338.0
BYD3_k127_6832492_3 Belongs to the ABC transporter superfamily K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000009566 245.0
BYD3_k127_6832492_4 COG4166 ABC-type oligopeptide transport system, periplasmic component K15580 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006810,GO:0006857,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0015833,GO:0030288,GO:0030313,GO:0031975,GO:0033218,GO:0042277,GO:0042597,GO:0042886,GO:0042939,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0061077,GO:0071702,GO:0071705,GO:1900750 - 0.00000000000000000000000000000000000000000000000000000000000000003025 228.0
BYD3_k127_684395_0 Tetratricopeptide repeat - - - 0.000000000000000000005599 109.0
BYD3_k127_684395_1 metallopeptidase activity - - - 0.000006529 60.0
BYD3_k127_6865557_0 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 584.0
BYD3_k127_6865557_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042,K17468 - 2.9.1.1,4.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005514 421.0
BYD3_k127_6865557_2 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 377.0
BYD3_k127_6865557_3 Branched-chain amino acid transport system / permease component K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 348.0
BYD3_k127_6865557_4 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 333.0
BYD3_k127_6865557_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 305.0
BYD3_k127_6865557_6 Amino acid amide ABC transporter ATP-binding protein 1, HAAT family K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006193 306.0
BYD3_k127_6865557_7 ABC transporter, ATP-binding protein K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 302.0
BYD3_k127_6865557_8 PFAM lipopolysaccharide biosynthesis protein - - - 0.000002503 60.0
BYD3_k127_6874968_0 Peptidase family M3 K01392 - 3.4.24.15 3.921e-196 642.0
BYD3_k127_6874968_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008068 550.0
BYD3_k127_6874968_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000001573 61.0
BYD3_k127_6874968_11 Hemerythrin HHE cation binding domain - - - 0.0000002099 59.0
BYD3_k127_6874968_12 - K20326 - - 0.000002084 60.0
BYD3_k127_6874968_13 DNA polymerase beta - - - 0.000008491 57.0
BYD3_k127_6874968_14 - - - - 0.0003851 53.0
BYD3_k127_6874968_2 PFAM NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 513.0
BYD3_k127_6874968_3 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 462.0
BYD3_k127_6874968_4 iron assimilation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 381.0
BYD3_k127_6874968_5 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 338.0
BYD3_k127_6874968_6 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002443 269.0
BYD3_k127_6874968_7 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.00000000000000000000000000000000000000001912 159.0
BYD3_k127_6874968_8 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000008309 115.0
BYD3_k127_6874968_9 DinB family - - - 0.0000000000000000000256 101.0
BYD3_k127_6907772_0 glyoxalase III activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 585.0
BYD3_k127_6907772_1 cellulase activity K20276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 340.0
BYD3_k127_6907772_2 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004556 245.0
BYD3_k127_6907772_3 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000304 206.0
BYD3_k127_6907772_4 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000004801 199.0
BYD3_k127_6907772_5 - - - - 0.0000000000000000000000000000000000000000000003538 176.0
BYD3_k127_6907772_6 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000001265 179.0
BYD3_k127_6907772_7 endonuclease activity K07451 - - 0.0000000000000000000000000000000000000000009935 174.0
BYD3_k127_6907772_8 STAS domain - - - 0.00000002927 60.0
BYD3_k127_6913762_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 2e-240 750.0
BYD3_k127_6913762_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 380.0
BYD3_k127_6913762_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 310.0
BYD3_k127_6913762_3 Diguanylate cyclase, GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002246 273.0
BYD3_k127_6913762_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000004389 262.0
BYD3_k127_6913762_5 Domains GAF, HisKA, HATPase_c, GAF, HD-GYP-related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005046 280.0
BYD3_k127_6913762_6 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000000000000000000000000000000000000933 186.0
BYD3_k127_6913762_7 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000008435 87.0
BYD3_k127_6916860_0 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 557.0
BYD3_k127_6916860_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000007216 181.0
BYD3_k127_6916860_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000007433 167.0
BYD3_k127_6916860_3 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000065 114.0
BYD3_k127_6916860_4 translation initiation factor activity K06996 - - 0.000000000000000000004329 98.0
BYD3_k127_6916860_5 Endonuclease I - - - 0.0000004715 63.0
BYD3_k127_6916860_6 Putative zinc-finger - - - 0.00001486 51.0
BYD3_k127_6921227_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 5.951e-303 943.0
BYD3_k127_6921227_1 SnoaL-like domain - - - 0.00000000000000000000000003856 126.0
BYD3_k127_6921227_2 Involved in the tonB-independent uptake of proteins - - - 0.0000000000002668 72.0
BYD3_k127_6934462_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005396 414.0
BYD3_k127_6934462_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 368.0
BYD3_k127_6934462_2 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000001814 156.0
BYD3_k127_6934462_3 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000000008739 127.0
BYD3_k127_6934462_4 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000004276 104.0
BYD3_k127_6934462_5 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000002002 62.0
BYD3_k127_6946051_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000479 524.0
BYD3_k127_6946051_1 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 460.0
BYD3_k127_6946051_10 response regulator K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000008415 241.0
BYD3_k127_6946051_11 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000002748 237.0
BYD3_k127_6946051_12 Domain of unknown function (DUF4159) - - - 0.000000000000000000000000000000000000000000000000000000000003043 217.0
BYD3_k127_6946051_13 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000425 220.0
BYD3_k127_6946051_14 negative regulation of phosphate transmembrane transport K02039 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.00000000000000000000000000000000000000000000000000001479 204.0
BYD3_k127_6946051_15 metallophosphoesterase K07096 - - 0.000000000000000000000000000000000000000000000000004265 192.0
BYD3_k127_6946051_16 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000004854 184.0
BYD3_k127_6946051_17 Transcriptional regulator - - - 0.000000000000000000000000000000000000000004925 169.0
BYD3_k127_6946051_18 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000001427 173.0
BYD3_k127_6946051_19 - - - - 0.000174 54.0
BYD3_k127_6946051_2 Peptidase dimerisation domain K01438,K01439 - 3.5.1.16,3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 403.0
BYD3_k127_6946051_3 phosphate ion binding K02040 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0006950,GO:0006974,GO:0008150,GO:0009314,GO:0009628,GO:0009987,GO:0010921,GO:0015698,GO:0019220,GO:0019222,GO:0030288,GO:0030313,GO:0031323,GO:0031975,GO:0033554,GO:0035303,GO:0042301,GO:0042597,GO:0043167,GO:0043168,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051174,GO:0051179,GO:0051234,GO:0051336,GO:0051716,GO:0065007,GO:0065009 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 376.0
BYD3_k127_6946051_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 361.0
BYD3_k127_6946051_5 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 346.0
BYD3_k127_6946051_6 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 311.0
BYD3_k127_6946051_7 inorganic phosphate transmembrane transporter activity K02037,K02038 GO:0008150,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044403,GO:0044419,GO:0051704 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 317.0
BYD3_k127_6946051_8 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002954 279.0
BYD3_k127_6946051_9 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005588 247.0
BYD3_k127_695080_0 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000000000000000001988 175.0
BYD3_k127_695080_2 peptidase activity - - - 0.000000000000000000000000000000000000000487 152.0
BYD3_k127_695080_3 Protein of unknown function, DUF488 - - - 0.00000000007276 64.0
BYD3_k127_6990559_0 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000007424 181.0
BYD3_k127_6990559_1 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000001189 79.0
BYD3_k127_6990559_2 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.0000000005616 67.0
BYD3_k127_7000126_0 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004426 508.0
BYD3_k127_7000126_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 353.0
BYD3_k127_7000126_2 protein kinase activity - - - 0.0000000000000000000000000003727 118.0
BYD3_k127_7041090_0 peptidase activity, acting on L-amino acid peptides K07004,K09955 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 406.0
BYD3_k127_7041090_1 nucleotide catabolic process K05996 - 3.4.17.18 0.000000000000004932 89.0
BYD3_k127_7042295_0 PFAM Glycosyl transferase family 2 K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 410.0
BYD3_k127_7042295_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 338.0
BYD3_k127_7042295_2 PFAM peptidase M6, immune inhibitor A - - - 0.000000000000000000000000000000000000000000000000000000000000003325 247.0
BYD3_k127_7042295_3 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000007377 96.0
BYD3_k127_7042295_4 HEAT repeat-containing protein - - - 0.0000000000000007341 90.0
BYD3_k127_7042295_5 Tetratricopeptide repeat - - - 0.00000000009615 69.0
BYD3_k127_7042295_6 SMART Tetratricopeptide repeat - - - 0.0000003541 63.0
BYD3_k127_7042295_7 Acetyltransferase (GNAT) family - - - 0.000001304 58.0
BYD3_k127_7056791_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000001851 234.0
BYD3_k127_7056791_1 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000001474 212.0
BYD3_k127_7056791_2 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000005517 201.0
BYD3_k127_7056791_3 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000002215 144.0
BYD3_k127_7056791_4 Belongs to the peptidase S8 family - - - 0.000000000005317 80.0
BYD3_k127_7056791_5 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000003974 63.0
BYD3_k127_7056791_6 CarboxypepD_reg-like domain K13276 - - 0.00008193 56.0
BYD3_k127_7086369_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 463.0
BYD3_k127_7086369_1 Glyoxalase-like domain - - - 0.000000000000000000000000000005797 121.0
BYD3_k127_7086369_2 PFAM PDZ domain (Also known as DHR or GLGF) - - - 0.000002085 57.0
BYD3_k127_71274_0 Belongs to the glycosyl hydrolase 1 family K05350 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 367.0
BYD3_k127_71274_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000001195 164.0
BYD3_k127_71274_2 translation initiation factor activity K03646 - - 0.00000068 58.0
BYD3_k127_71274_3 translation initiation factor activity K03646 - - 0.00001162 57.0
BYD3_k127_7149841_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1343.0
BYD3_k127_7149841_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 2.081e-310 971.0
BYD3_k127_7149841_10 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.000000000000000000000002626 116.0
BYD3_k127_7149841_11 GatB Yqey domain protein K09117 - - 0.00000000000000000000001528 107.0
BYD3_k127_7149841_12 Transporter, MotA TolQ ExbB proton channel family protein K03561 - - 0.0000000000000000000004032 104.0
BYD3_k127_7149841_13 epimerase dehydratase K00091 - 1.1.1.219 0.00000000000000000005621 102.0
BYD3_k127_7149841_14 - - - - 0.000000000000000231 94.0
BYD3_k127_7149841_15 Biopolymer transport protein K03560 - - 0.000000000008144 71.0
BYD3_k127_7149841_16 outer membrane efflux protein - - - 0.00000000002573 76.0
BYD3_k127_7149841_17 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000005582 63.0
BYD3_k127_7149841_18 Tetratricopeptide repeat - - - 0.000001142 63.0
BYD3_k127_7149841_19 ompA family - - - 0.000001914 61.0
BYD3_k127_7149841_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 408.0
BYD3_k127_7149841_20 Biopolymer transport protein ExbD/TolR K03559 - - 0.000003116 54.0
BYD3_k127_7149841_21 energy transducer activity K00700,K03832 - 2.4.1.18 0.00000714 58.0
BYD3_k127_7149841_22 ompA family - - - 0.000008001 58.0
BYD3_k127_7149841_23 metallopeptidase activity K01179 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0016052,GO:0016787,GO:0016798,GO:0033946,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0052736,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.4 0.0000676 57.0
BYD3_k127_7149841_24 Evidence 5 No homology to any previously reported sequences - - - 0.00007837 54.0
BYD3_k127_7149841_3 Lanthionine synthetase C family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006371 316.0
BYD3_k127_7149841_4 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005828 313.0
BYD3_k127_7149841_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001018 303.0
BYD3_k127_7149841_6 Thrombospondin type 3 repeat - - - 0.0000000000000000000000000000000000000000000000000000005645 212.0
BYD3_k127_7149841_7 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000005503 178.0
BYD3_k127_7149841_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000009731 131.0
BYD3_k127_7149841_9 o-methyltransferase - - - 0.0000000000000000000000007874 121.0
BYD3_k127_7151756_0 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 4.045e-208 658.0
BYD3_k127_7151756_1 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 344.0
BYD3_k127_7151756_2 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000005362 220.0
BYD3_k127_7151756_3 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000156 170.0
BYD3_k127_7151756_4 DinB family - - - 0.00000004758 60.0
BYD3_k127_7158761_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 475.0
BYD3_k127_7158761_1 Belongs to the glycosyl hydrolase 18 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 329.0
BYD3_k127_7158761_2 Amidohydrolase - - - 0.000000000000000000000000000000005082 138.0
BYD3_k127_7158761_4 protein conserved in bacteria - - - 0.0007364 48.0
BYD3_k127_7162456_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000000000000000000000007207 144.0
BYD3_k127_7162456_1 Thioesterase superfamily - - - 0.000000000000000000000001039 108.0
BYD3_k127_7162456_2 - - - - 0.00000000000000000000002277 104.0
BYD3_k127_7162456_3 - - - - 0.000000000000000000765 102.0
BYD3_k127_7194201_0 Involved in the tonB-independent uptake of proteins - - - 3.067e-221 714.0
BYD3_k127_7194201_1 Glutamate-cysteine ligase family 2(GCS2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 457.0
BYD3_k127_7194201_2 succinylglutamate desuccinylase activity K05526 - 3.5.1.96 0.000000000000000000000000000000000000000000000000000000000000001251 244.0
BYD3_k127_7234893_0 PFAM Cytochrome c assembly protein K02198 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 587.0
BYD3_k127_7234893_1 COG2513 PEP phosphonomutase and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 351.0
BYD3_k127_7234893_10 PFAM phosphoesterase, PA-phosphatase related - - - 0.000000000000009124 87.0
BYD3_k127_7234893_11 subunit of a heme lyase K02200 - - 0.000000000007962 79.0
BYD3_k127_7234893_12 HNH nucleases - - - 0.0004631 45.0
BYD3_k127_7234893_2 PFAM Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000003684 235.0
BYD3_k127_7234893_3 COG1131 ABC-type multidrug transport system, ATPase component K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000005492 171.0
BYD3_k127_7234893_4 ABC-type transport system involved in cytochrome c biogenesis, permease component K02195 - - 0.00000000000000000000000000000000000000000005778 169.0
BYD3_k127_7234893_5 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000000000003848 117.0
BYD3_k127_7234893_6 beta-lactamase - - - 0.0000000000000000000007014 101.0
BYD3_k127_7234893_7 Cytochrome c - - - 0.00000000000000000003811 106.0
BYD3_k127_7234893_8 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000005184 94.0
BYD3_k127_7234893_9 ABC-type transport system involved in cytochrome c biogenesis permease component K02194 - - 0.000000000000000002539 95.0
BYD3_k127_725119_0 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005177 469.0
BYD3_k127_725119_1 PFAM ATP dependent DNA ligase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 366.0
BYD3_k127_725119_2 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000000000000009375 239.0
BYD3_k127_725119_3 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000003041 195.0
BYD3_k127_725119_4 Doxx family K15977 - - 0.0000000000000000000000000003013 129.0
BYD3_k127_733364_0 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000001024 161.0
BYD3_k127_733364_1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus K00057 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0047952,GO:0055114 1.1.1.94 0.0000000000000000000000000000000000000001093 167.0
BYD3_k127_733364_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000002863 105.0
BYD3_k127_7336330_0 beta-galactosidase activity K12308 - 3.2.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 409.0
BYD3_k127_7336330_1 osmolarity-sensing cation channel activity - - - 0.000000000000000000000000000000000001659 155.0
BYD3_k127_7336330_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000001055 81.0
BYD3_k127_7336330_3 ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import K01338 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0006508,GO:0006605,GO:0006625,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015031,GO:0015833,GO:0016043,GO:0016485,GO:0019538,GO:0031907,GO:0031974,GO:0033036,GO:0033365,GO:0034613,GO:0042579,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043574,GO:0044238,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051604,GO:0051641,GO:0051649,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072662,GO:0072663,GO:1901564 3.4.21.53 0.000007494 59.0
BYD3_k127_7360350_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 373.0
BYD3_k127_7360350_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0000028,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002759 285.0
BYD3_k127_7360350_10 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000002128 131.0
BYD3_k127_7360350_11 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000009122 126.0
BYD3_k127_7360350_12 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000007826 117.0
BYD3_k127_7360350_13 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000246 122.0
BYD3_k127_7360350_14 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000003213 106.0
BYD3_k127_7360350_15 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000002024 113.0
BYD3_k127_7360350_16 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000613 97.0
BYD3_k127_7360350_17 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000000009158 64.0
BYD3_k127_7360350_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000002911 255.0
BYD3_k127_7360350_3 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000000000000001284 229.0
BYD3_k127_7360350_4 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000003595 213.0
BYD3_k127_7360350_5 Forms part of the polypeptide exit tunnel K02926 - - 0.0000000000000000000000000000000000000000000000006559 181.0
BYD3_k127_7360350_6 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000008104 177.0
BYD3_k127_7360350_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000009262 162.0
BYD3_k127_7360350_8 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000001118 143.0
BYD3_k127_7360350_9 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000002246 138.0
BYD3_k127_7529731_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 2.33e-226 717.0
BYD3_k127_7529731_1 5TM C-terminal transporter carbon starvation CstA K06200 - - 2.032e-205 658.0
BYD3_k127_7529731_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000576 268.0
BYD3_k127_7529731_11 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000002198 255.0
BYD3_k127_7529731_12 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K03601,K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004784,GO:0005488,GO:0005506,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009266,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009607,GO:0009628,GO:0009636,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0010269,GO:0010447,GO:0016020,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0020012,GO:0030145,GO:0030682,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0042597,GO:0043167,GO:0043169,GO:0043207,GO:0044237,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052059,GO:0052173,GO:0052200,GO:0052385,GO:0052550,GO:0052564,GO:0052567,GO:0052572,GO:0055114,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071291,GO:0071450,GO:0071451,GO:0071944,GO:0072593,GO:0075136,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.15.1.1,3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000001416 231.0
BYD3_k127_7529731_13 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000004119 199.0
BYD3_k127_7529731_14 MgtC family K07507 - - 0.0000000000000000000000000000000000000000000000000001157 191.0
BYD3_k127_7529731_15 RNA signal recognition particle 4.5S RNA - - - 0.000000000000000000000000000000000000000000000005685 175.0
BYD3_k127_7529731_16 DinB superfamily - - - 0.0000000000000000000000000000000000000000000001093 192.0
BYD3_k127_7529731_17 Rhomboid family - - - 0.0000000000000000000000000000000000000000000003827 189.0
BYD3_k127_7529731_18 nUDIX hydrolase - - - 0.0000000000000000000000000000000001305 144.0
BYD3_k127_7529731_19 - - - - 0.0000000000000000000000000000000006206 139.0
BYD3_k127_7529731_2 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 652.0
BYD3_k127_7529731_20 Predicted integral membrane protein (DUF2269) - - - 0.000000000000000000000000000003452 126.0
BYD3_k127_7529731_21 DNA polymerase alpha chain like domain K02337 - 2.7.7.7 0.00000000000000000000000000002146 121.0
BYD3_k127_7529731_22 - - - - 0.000000000000000000000000002957 117.0
BYD3_k127_7529731_23 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000004951 106.0
BYD3_k127_7529731_24 methyltransferase activity - - - 0.0000000000000000002286 102.0
BYD3_k127_7529731_25 Ferredoxin - - - 0.0000000000000000004556 93.0
BYD3_k127_7529731_26 protocatechuate 3,4-dioxygenase activity K00449 - 1.13.11.3 0.000000000000000004278 96.0
BYD3_k127_7529731_28 - - - - 0.000001215 57.0
BYD3_k127_7529731_3 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004045 484.0
BYD3_k127_7529731_4 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 422.0
BYD3_k127_7529731_5 PFAM thiamine pyrophosphate protein domain protein TPP-binding K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 440.0
BYD3_k127_7529731_6 HAD superfamily (subfamily IG) hydrolase 5'-Nucleotidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 368.0
BYD3_k127_7529731_7 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 338.0
BYD3_k127_7529731_8 Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 333.0
BYD3_k127_7529731_9 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002208 300.0
BYD3_k127_7535731_0 Peptidase S9, prolyl oligopeptidase active site domain protein - - - 0.00000000000000000000000000000000000000004758 170.0
BYD3_k127_7535731_1 COG0438 Glycosyltransferase K07011 - - 0.0000000000001203 76.0
BYD3_k127_7541621_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004369 554.0
BYD3_k127_7541621_1 PFAM Type II secretion system protein E K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 520.0
BYD3_k127_7541621_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 469.0
BYD3_k127_7541621_3 with chaperone activity ATP-binding K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 449.0
BYD3_k127_7541621_4 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009543 337.0
BYD3_k127_7541621_5 Catalyzes the specific phosphorylation of arginine residues in proteins K19405 - 2.7.14.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 330.0
BYD3_k127_7541621_6 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051234,GO:0051641,GO:0055085,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0097159,GO:0097367,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1990778 - 0.00000000000000000000000000000000000000000000000000000000000000995 224.0
BYD3_k127_7541621_7 UvrB/uvrC motif K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 - 0.00000000000000000000000000000000000000000000786 168.0
BYD3_k127_7573929_0 efflux transmembrane transporter activity - - - 7.046e-228 736.0
BYD3_k127_7573929_1 peptidase, M13 K01415,K07386 - 3.4.24.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 620.0
BYD3_k127_7573929_10 helix_turn_helix, Lux Regulon - - - 0.000000000004367 69.0
BYD3_k127_7573929_12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00002899 55.0
BYD3_k127_7573929_13 - - - - 0.0001761 52.0
BYD3_k127_7573929_2 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 592.0
BYD3_k127_7573929_3 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006737 481.0
BYD3_k127_7573929_4 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005095 424.0
BYD3_k127_7573929_5 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 365.0
BYD3_k127_7573929_6 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000004129 224.0
BYD3_k127_7573929_7 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000000000000000000001418 139.0
BYD3_k127_7573929_8 Dodecin K09165 - - 0.00000000000000000001934 95.0
BYD3_k127_7573929_9 NapC/NirT cytochrome c family, N-terminal region K02569 - - 0.00000000000000000002141 99.0
BYD3_k127_758738_0 Belongs to the N(4) N(6)-methyltransferase family - - - 0.00000000000006329 73.0
BYD3_k127_758738_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000001761 82.0
BYD3_k127_758738_2 - - - - 0.000000003768 69.0
BYD3_k127_7594350_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004918 488.0
BYD3_k127_7594350_1 Protein of unknown function (DUF2723) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005944 391.0
BYD3_k127_7594350_10 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000001808 180.0
BYD3_k127_7594350_11 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000008032 155.0
BYD3_k127_7594350_12 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000001333 124.0
BYD3_k127_7594350_13 lysyltransferase activity K07027 - - 0.00000000000000000000000001272 126.0
BYD3_k127_7594350_2 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 332.0
BYD3_k127_7594350_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 317.0
BYD3_k127_7594350_4 PFAM NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 316.0
BYD3_k127_7594350_5 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007903 297.0
BYD3_k127_7594350_6 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000006933 216.0
BYD3_k127_7594350_7 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000008688 206.0
BYD3_k127_7594350_8 Glycosyl transferase family group 2 K07011 - - 0.0000000000000000000000000000000000000000000007732 191.0
BYD3_k127_7594350_9 riboflavin synthase, alpha K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000001846 178.0
BYD3_k127_7611562_0 Dehydrogenase K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 432.0
BYD3_k127_7611562_1 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009337 278.0
BYD3_k127_7611562_2 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000008315 190.0
BYD3_k127_7611562_3 Redoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000009097 159.0
BYD3_k127_7611562_4 - - - - 0.00001734 57.0
BYD3_k127_7619061_0 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 5.749e-309 985.0
BYD3_k127_7619061_1 Belongs to the aldehyde dehydrogenase family K22187 - - 9.078e-210 663.0
BYD3_k127_7619061_2 L-asparaginase II - - - 0.0000000000000000000000000000000000000000000000000000000000000000005022 244.0
BYD3_k127_7619061_3 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000006718 249.0
BYD3_k127_7619061_5 protein secretion - - - 0.00000000004511 76.0
BYD3_k127_7619061_6 COG3209 Rhs family protein - - - 0.0000000004139 72.0
BYD3_k127_7619061_7 transferase activity, transferring glycosyl groups - - - 0.00000002081 68.0
BYD3_k127_7619061_8 Periplasmic component of the Tol biopolymer transport system - - - 0.00002756 57.0
BYD3_k127_7678482_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 550.0
BYD3_k127_7678482_1 Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the stringent response , an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities K01524 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006082,GO:0006139,GO:0006725,GO:0006793,GO:0006797,GO:0006798,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008894,GO:0009056,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034641,GO:0042594,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:1901360,GO:1901575 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006242 340.0
BYD3_k127_7678482_10 FeoA domain protein K04758 - - 0.0000000004753 70.0
BYD3_k127_7678482_11 - - - - 0.0001164 55.0
BYD3_k127_7678482_2 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 325.0
BYD3_k127_7678482_3 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000005776 189.0
BYD3_k127_7678482_4 CHAD domain containing protein - - - 0.000000000000000000000000000000000000000000000000475 198.0
BYD3_k127_7678482_5 phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000000000000000007168 119.0
BYD3_k127_7678482_6 - - - - 0.0000000000000000000002027 104.0
BYD3_k127_7678482_7 Helix-turn-helix domain K03088 - - 0.000000000000000000007248 100.0
BYD3_k127_7678482_8 PFAM Iron dependent repressor, metal binding and dimerisation domain - - - 0.0000000000000000008096 94.0
BYD3_k127_7678482_9 glyoxalase III activity - - - 0.000000000001678 69.0
BYD3_k127_7721235_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 2.558e-239 753.0
BYD3_k127_7734778_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 366.0
BYD3_k127_7734778_1 Nucleotidyl transferase of unknown function (DUF2204) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 287.0
BYD3_k127_7734778_10 cell adhesion involved in biofilm formation - - - 0.00000000000000000000000000004997 131.0
BYD3_k127_7734778_11 - - - - 0.000000000000000000000000203 115.0
BYD3_k127_7734778_12 Tetratricopeptide repeats - - - 0.00000007246 63.0
BYD3_k127_7734778_2 metallophosphoesterase K07096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002874 282.0
BYD3_k127_7734778_3 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000007135 250.0
BYD3_k127_7734778_4 hydrolase, family 3 K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000092 252.0
BYD3_k127_7734778_5 Evidence 5 No homology to any previously reported sequences K09607 - - 0.000000000000000000000000000000000000000000000000000000001145 230.0
BYD3_k127_7734778_6 Calcineurin-like phosphoesterase K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.00000000000000000000000000000000000000000000000000003511 196.0
BYD3_k127_7734778_7 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022613,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0036094,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.1.3.100 0.0000000000000000000000000000000000000000000002285 179.0
BYD3_k127_7734778_8 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000205 150.0
BYD3_k127_7734778_9 pfam nudix - - - 0.00000000000000000000000000000003189 127.0
BYD3_k127_773500_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1197.0
BYD3_k127_773500_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.104e-238 764.0
BYD3_k127_773500_10 Transglycosylase SLT domain K08307,K12204 - - 0.00000000000000000000000000000000000000000000000000000000000000357 237.0
BYD3_k127_773500_11 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000003927 239.0
BYD3_k127_773500_12 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000007149 213.0
BYD3_k127_773500_13 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000009742 181.0
BYD3_k127_773500_14 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.00000000000000000000000000000000000000000001196 175.0
BYD3_k127_773500_15 Immune inhibitor A peptidase M6 - - - 0.000000000000000000000000000000000000000001409 180.0
BYD3_k127_773500_16 transglycosylase K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009274,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000001385 140.0
BYD3_k127_773500_17 dolichyl monophosphate biosynthetic process K08591 - 2.3.1.15 0.0000000000000000000000000005313 121.0
BYD3_k127_773500_18 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530,K05788 - - 0.000000000000000000000000121 109.0
BYD3_k127_773500_19 peptidase activity, acting on L-amino acid peptides K01179 - 3.2.1.4 0.00000000000000000000001233 118.0
BYD3_k127_773500_2 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 595.0
BYD3_k127_773500_20 solute binding protein K02035 - - 0.00000000000000000001138 108.0
BYD3_k127_773500_21 Bacterial Ig-like domain K07156 - - 0.000000000003039 79.0
BYD3_k127_773500_22 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.000000003929 57.0
BYD3_k127_773500_3 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 476.0
BYD3_k127_773500_4 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007407 457.0
BYD3_k127_773500_5 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009604 389.0
BYD3_k127_773500_6 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004993 364.0
BYD3_k127_773500_7 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006643 352.0
BYD3_k127_773500_8 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006748 334.0
BYD3_k127_773500_9 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000903 267.0
BYD3_k127_7763214_0 Peptidase family M1 domain K01992 - - 0.0 1115.0
BYD3_k127_7763214_1 activity, protein serine threonine kinase activity, protein-tyrosine kinase activity, ATP binding, regulation of transcription, DNA-dependent, protein amino acid phosphorylation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 478.0
BYD3_k127_7763214_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K19837 - 3.5.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007477 438.0
BYD3_k127_7763214_3 two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 438.0
BYD3_k127_7763214_4 (ABC) transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 406.0
BYD3_k127_7763214_5 Major facilitator Superfamily K08162,K08226,K16211 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000786 400.0
BYD3_k127_7763214_6 Histidine kinase K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000001571 235.0
BYD3_k127_7763214_7 META domain - - - 0.000000000000000000000000000000000000000000000000009398 193.0
BYD3_k127_7763214_8 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000438 144.0
BYD3_k127_7763214_9 - - - - 0.0000000000000000000000000000008181 125.0
BYD3_k127_7775474_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 312.0
BYD3_k127_7775474_1 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 319.0
BYD3_k127_7775474_10 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.000000002464 68.0
BYD3_k127_7775474_11 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000001018 64.0
BYD3_k127_7775474_12 MacB-like periplasmic core domain K02004 - - 0.0000002418 56.0
BYD3_k127_7775474_13 Pfam Biopolymer transport protein ExbD TolR - - - 0.00001228 57.0
BYD3_k127_7775474_2 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000003802 237.0
BYD3_k127_7775474_3 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000003591 186.0
BYD3_k127_7775474_4 PFAM Biopolymer transport protein ExbD TolR - - - 0.00000000000000000000000000000000000482 142.0
BYD3_k127_7775474_5 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000000000001304 127.0
BYD3_k127_7775474_6 biopolymer transport protein - - - 0.000000000000000000000004121 107.0
BYD3_k127_7775474_7 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000001352 83.0
BYD3_k127_7775474_8 outer membrane efflux protein - - - 0.00000000000001405 88.0
BYD3_k127_7775474_9 STAS domain - - - 0.000000001133 64.0
BYD3_k127_7838254_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009802 333.0
BYD3_k127_7838254_1 - - - - 0.00000002864 66.0
BYD3_k127_7838254_2 Belongs to the glycosyl hydrolase 13 family - - - 0.00002696 57.0
BYD3_k127_7867743_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 516.0
BYD3_k127_7867743_1 to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004917 475.0
BYD3_k127_7867743_10 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001167 301.0
BYD3_k127_7867743_11 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002531 282.0
BYD3_k127_7867743_12 TIGRFAM stage V sporulation protein E, cell division protein FtsW K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001655 283.0
BYD3_k127_7867743_13 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08256 - 2.4.1.345,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000000000001223 266.0
BYD3_k127_7867743_14 ADP-ribosylation factor family K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000008405 241.0
BYD3_k127_7867743_15 Glycosyltransferase like family 2 K03606,K07011 - - 0.000000000000000000000000000000000000000000000000000000000173 231.0
BYD3_k127_7867743_16 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000002703 199.0
BYD3_k127_7867743_17 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000004008 207.0
BYD3_k127_7867743_18 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000005352 175.0
BYD3_k127_7867743_19 MraZ protein, putative antitoxin-like K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000000000000001858 149.0
BYD3_k127_7867743_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006186 456.0
BYD3_k127_7867743_20 Major facilitator Superfamily - - - 0.00000000000000000000000008058 125.0
BYD3_k127_7867743_21 Bacterial membrane protein YfhO - - - 0.00000000000000000000002124 110.0
BYD3_k127_7867743_22 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000002656 93.0
BYD3_k127_7867743_23 Kdo2-lipid A biosynthetic process K02517,K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.241,2.3.1.265 0.000000000000000001098 97.0
BYD3_k127_7867743_24 - - - - 0.000000000000000003305 101.0
BYD3_k127_7867743_25 - - - - 0.00000000000000001248 96.0
BYD3_k127_7867743_26 COG0457 FOG TPR repeat - - - 0.0000000000000001971 88.0
BYD3_k127_7867743_27 Acetyltransferase (GNAT) domain - - - 0.0000000000000005968 92.0
BYD3_k127_7867743_28 Essential cell division protein K03589 - - 0.0000000004035 73.0
BYD3_k127_7867743_29 STAS domain - - - 0.00006442 54.0
BYD3_k127_7867743_3 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 466.0
BYD3_k127_7867743_4 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0051258,GO:0051301,GO:0065003,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000746 389.0
BYD3_k127_7867743_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 388.0
BYD3_k127_7867743_6 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 347.0
BYD3_k127_7867743_7 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008764,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 362.0
BYD3_k127_7867743_8 Penicillin-binding Protein dimerisation domain K03587,K08384,K08724,K12552,K12556 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 350.0
BYD3_k127_7867743_9 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003326 336.0
BYD3_k127_7870641_0 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 347.0
BYD3_k127_7870641_1 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 315.0
BYD3_k127_7870641_2 Protein of unknown function (DUF3494) - - - 0.00000000000000000000000000000000000000000000000000000000000000001182 241.0
BYD3_k127_7870641_3 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000002502 88.0
BYD3_k127_7871459_0 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000001359 232.0
BYD3_k127_7871459_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000007423 193.0
BYD3_k127_7871459_2 Glycosyl transferases group 1 - - - 0.0000000000000000002558 103.0
BYD3_k127_7940500_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007536 566.0
BYD3_k127_7940500_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 383.0
BYD3_k127_7940500_10 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.000000000000000000000000000000000007354 145.0
BYD3_k127_7940500_11 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000005515 136.0
BYD3_k127_7940500_12 Cytochrome c - - - 0.000000000000008946 87.0
BYD3_k127_7940500_13 Ribosomal protein L30p/L7e K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000134 72.0
BYD3_k127_7940500_14 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000001437 67.0
BYD3_k127_7940500_2 Metallopeptidase family M24 K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000451 293.0
BYD3_k127_7940500_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0000028,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006417,GO:0006446,GO:0006450,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015935,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030371,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031554,GO:0031564,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045727,GO:0045903,GO:0045947,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990145,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000004585 254.0
BYD3_k127_7940500_4 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000001764 237.0
BYD3_k127_7940500_5 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000009501 194.0
BYD3_k127_7940500_6 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000002032 182.0
BYD3_k127_7940500_7 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000008529 171.0
BYD3_k127_7940500_8 Glycosyl hydrolase-like 10 - - - 0.00000000000000000000000000000000000000000001534 180.0
BYD3_k127_7940500_9 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 - 0.000000000000000000000000000000000005925 136.0
BYD3_k127_7966855_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000002456 273.0
BYD3_k127_7966855_1 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000001486 260.0
BYD3_k127_7966855_2 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000004088 151.0
BYD3_k127_7966855_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000001026 50.0
BYD3_k127_8018990_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 501.0
BYD3_k127_8018990_1 PSP1 C-terminal conserved region - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000002021 262.0
BYD3_k127_8018990_2 Hydrolase, tatd K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000002189 220.0
BYD3_k127_8018990_3 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000001538 190.0
BYD3_k127_8018990_4 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.000000000000000000000000000000005132 142.0
BYD3_k127_8044576_0 COGs COG0674 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase alpha subunit K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 374.0
BYD3_k127_8044576_1 Fe-S cluster K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 328.0
BYD3_k127_8044576_2 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000882 267.0
BYD3_k127_8044576_3 PFAM thiamine pyrophosphate protein domain protein TPP-binding K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000004685 267.0
BYD3_k127_8044576_4 Part of a membrane complex involved in electron transport K03613 - - 0.000000000000000000000000000000000000000000000000000000000000000004085 244.0
BYD3_k127_8044576_5 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000000000000000000005537 158.0
BYD3_k127_8123948_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 570.0
BYD3_k127_8123948_1 PFAM aminotransferase, class I K00812,K10907 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 481.0
BYD3_k127_8123948_10 repeat protein - - - 0.0000000002274 70.0
BYD3_k127_8123948_11 - - - - 0.0000000004745 62.0
BYD3_k127_8123948_12 von Willebrand factor (vWF) type A domain - - - 0.000000002968 70.0
BYD3_k127_8123948_13 Lamin Tail Domain - - - 0.000000006244 70.0
BYD3_k127_8123948_14 Domain of unknown function (DUF4154) - - - 0.00000007658 55.0
BYD3_k127_8123948_15 Subtilase family - - - 0.0000639 48.0
BYD3_k127_8123948_2 Sigma factor PP2C-like phosphatases K04757,K07315 - 2.7.11.1,3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009863 497.0
BYD3_k127_8123948_3 PFAM Aspartate glutamate uridylate kinase K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005951 338.0
BYD3_k127_8123948_4 ABC transporter K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000001258 196.0
BYD3_k127_8123948_5 Anti-sigma factor antagonist K04749,K06378 - - 0.00000000000000000000000000000000000002766 153.0
BYD3_k127_8123948_6 - - - - 0.000000000000000003232 98.0
BYD3_k127_8123948_7 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000004413 96.0
BYD3_k127_8123948_8 Tetratricopeptide repeat - - - 0.0000000000000947 85.0
BYD3_k127_8123948_9 Lamin Tail Domain - - - 0.00000000009884 70.0
BYD3_k127_8166582_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1131.0
BYD3_k127_8166582_1 Protein of unknown function (DUF1211) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 284.0
BYD3_k127_8166582_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003062 267.0
BYD3_k127_8166582_3 - - - - 0.000000000000000000000000000000000000000000000000001297 200.0
BYD3_k127_8166582_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000001146 190.0
BYD3_k127_8166582_5 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000001902 182.0
BYD3_k127_8166582_6 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000003598 156.0
BYD3_k127_8166582_7 Protein of unknown function (DUF1203) - - - 0.0000000000000000000000001515 113.0
BYD3_k127_8182179_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.265e-221 729.0
BYD3_k127_8182179_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 593.0
BYD3_k127_8182179_10 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000001159 165.0
BYD3_k127_8182179_11 TPR repeat - - - 0.00000000000000000000000000000000000002959 153.0
BYD3_k127_8182179_12 PTS system sorbose subfamily IIB component K02794,K19507 - 2.7.1.191 0.000000000000000000000000107 113.0
BYD3_k127_8182179_13 outer membrane assembly lipoprotein YfiO K05807 - - 0.00000000000000000000003179 109.0
BYD3_k127_8182179_14 PTS system, mannose fructose sorbose family, IID component K02796 - - 0.00000000000000000000007972 113.0
BYD3_k127_8182179_15 PTS HPr component phosphorylation site K11189 - - 0.00000000000000000003767 104.0
BYD3_k127_8182179_16 system, fructose subfamily IIA component K02793,K02794 - 2.7.1.191 0.00000000000008224 77.0
BYD3_k127_8182179_17 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase - - - 0.0000002198 59.0
BYD3_k127_8182179_2 Ftsk_gamma K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 516.0
BYD3_k127_8182179_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000436 509.0
BYD3_k127_8182179_4 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 486.0
BYD3_k127_8182179_5 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 383.0
BYD3_k127_8182179_6 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004271 340.0
BYD3_k127_8182179_7 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 297.0
BYD3_k127_8182179_8 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000007645 229.0
BYD3_k127_8182179_9 Bifunctional phosphoglucose phosphomannose isomerase K15916 - 5.3.1.8,5.3.1.9 0.0000000000000000000000000000000000000000000000000001025 213.0
BYD3_k127_8187235_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1251.0
BYD3_k127_8187235_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.066e-237 753.0
BYD3_k127_8187235_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 486.0
BYD3_k127_8187235_3 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 354.0
BYD3_k127_8187235_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008795 363.0
BYD3_k127_8187235_5 E1-E2 ATPase K01534 - 3.6.3.3,3.6.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005885 318.0
BYD3_k127_8187235_6 amino acid activation for nonribosomal peptide biosynthetic process K17713,K20952 - - 0.0000000000000000000000000000000000000000000000000000000000003628 243.0
BYD3_k127_8187235_7 Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000001281 161.0
BYD3_k127_8187235_8 capsule polysaccharide biosynthetic process - - - 0.00000000000000007841 95.0
BYD3_k127_8187235_9 SNARE associated Golgi protein - - - 0.000000000000000287 94.0
BYD3_k127_8216056_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 496.0
BYD3_k127_8216056_1 - - - - 0.00000000000000000000000000000000000000000000000007578 186.0
BYD3_k127_8216056_3 translation initiation factor activity - - - 0.00000001551 67.0
BYD3_k127_8279148_0 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.0000000000000000000000007732 105.0
BYD3_k127_8279148_1 - - - - 0.00000003511 67.0
BYD3_k127_8304293_0 amine dehydrogenase activity - - - 3.581e-261 838.0
BYD3_k127_8304293_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 6.16e-237 745.0
BYD3_k127_8304293_10 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000000003571 89.0
BYD3_k127_8304293_11 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000001223 60.0
BYD3_k127_8304293_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 416.0
BYD3_k127_8304293_3 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004751 317.0
BYD3_k127_8304293_4 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000004767 162.0
BYD3_k127_8304293_5 NUDIX domain - - - 0.0000000000000000000000000000000000001529 149.0
BYD3_k127_8304293_6 Protease prsW family - - - 0.00000000000000000000000000000000001495 148.0
BYD3_k127_8304293_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000001093 126.0
BYD3_k127_8304293_8 Calcineurin-like phosphoesterase superfamily domain K03547 - - 0.00000000000000000009107 100.0
BYD3_k127_8304293_9 cellulase activity K01201 - 3.2.1.45 0.0000000000000000009311 100.0
BYD3_k127_8318330_0 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 443.0
BYD3_k127_8443322_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 463.0
BYD3_k127_8443322_1 Elongation factor SelB, winged helix K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000636 469.0
BYD3_k127_8443322_2 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 368.0
BYD3_k127_8443322_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000007517 250.0
BYD3_k127_8443322_4 Putative RNA methylase family UPF0020 K02493 - 2.1.1.297 0.00000000000000000000000000000000000004246 151.0
BYD3_k127_8443322_5 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000001379 88.0
BYD3_k127_8457553_0 Glycosyl hydrolase 36 superfamily, catalytic domain K00702,K13688 - 2.4.1.20 0.0 3161.0
BYD3_k127_8457553_1 Pyridoxal-dependent decarboxylase conserved domain K01593,K01634 - 4.1.1.105,4.1.1.28,4.1.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 575.0
BYD3_k127_8457553_10 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 329.0
BYD3_k127_8457553_11 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002469 292.0
BYD3_k127_8457553_12 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000238 278.0
BYD3_k127_8457553_13 PFAM band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000385 253.0
BYD3_k127_8457553_14 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000000001593 207.0
BYD3_k127_8457553_15 ADP-ribosyl-(Dinitrogen reductase) hydrolase K05521 - 3.2.2.24 0.00000000000000000000000000000000000000000005284 175.0
BYD3_k127_8457553_16 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000001454 164.0
BYD3_k127_8457553_17 Alpha/beta hydrolase family - - - 0.00000000000000000000001171 119.0
BYD3_k127_8457553_18 serine-type endopeptidase activity K14645,K20276 - - 0.0000000000000000001377 104.0
BYD3_k127_8457553_19 PFAM Rhodanese domain protein K03972 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005623,GO:0016740,GO:0016782,GO:0016783,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.0000000000000000004673 103.0
BYD3_k127_8457553_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 495.0
BYD3_k127_8457553_20 extracellular matrix structural constituent - - - 0.0000000000000003043 94.0
BYD3_k127_8457553_21 Response regulator receiver - - - 0.0000000000000008549 86.0
BYD3_k127_8457553_22 extracellular matrix structural constituent - - - 0.0000000000001093 85.0
BYD3_k127_8457553_23 cellulose binding - - - 0.000000000002249 81.0
BYD3_k127_8457553_24 WD40-like Beta Propeller Repeat - - - 0.000000000004569 79.0
BYD3_k127_8457553_25 COG COG1585 Membrane protein implicated in regulation of membrane protease activity - - - 0.0000004418 59.0
BYD3_k127_8457553_26 PFAM Cellulose synthase operon K20543 - - 0.000009553 58.0
BYD3_k127_8457553_27 PKD domain K07282 - - 0.00002193 58.0
BYD3_k127_8457553_28 Membrane - - - 0.0008962 48.0
BYD3_k127_8457553_3 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 446.0
BYD3_k127_8457553_4 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 446.0
BYD3_k127_8457553_5 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 432.0
BYD3_k127_8457553_6 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004914 415.0
BYD3_k127_8457553_7 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 361.0
BYD3_k127_8457553_8 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 329.0
BYD3_k127_8457553_9 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 324.0
BYD3_k127_8469766_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 2.673e-229 738.0
BYD3_k127_8469766_1 membrane organization - - - 2.14e-200 655.0
BYD3_k127_8469766_10 Glyco_18 K01448,K07260,K20276 - 3.4.17.14,3.5.1.28 0.00005825 57.0
BYD3_k127_8469766_11 cell adhesion K02650 - - 0.0006604 49.0
BYD3_k127_8469766_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008567 515.0
BYD3_k127_8469766_3 Sodium/calcium exchanger protein K07300 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007473 387.0
BYD3_k127_8469766_4 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008492 379.0
BYD3_k127_8469766_5 secondary active sulfate transmembrane transporter activity K03321 GO:0003333,GO:0003674,GO:0005215,GO:0005310,GO:0005326,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0008272,GO:0008509,GO:0008514,GO:0015075,GO:0015103,GO:0015116,GO:0015138,GO:0015141,GO:0015171,GO:0015172,GO:0015179,GO:0015183,GO:0015238,GO:0015318,GO:0015556,GO:0015698,GO:0015711,GO:0015740,GO:0015741,GO:0015744,GO:0015800,GO:0015807,GO:0015810,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070778,GO:0071422,GO:0071702,GO:0071705,GO:0071944,GO:0072348,GO:0098656,GO:0098660,GO:0098661,GO:1901682,GO:1902358,GO:1902475,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000000000000000000000000007491 219.0
BYD3_k127_8469766_6 BioY family K03523 - - 0.0000000000000000000000000000000000000000000000000000000005346 207.0
BYD3_k127_8469766_7 TIGRFAM phosphoesterase, MJ0936 family K07095 - - 0.00000000000000000000000000000000000000000000000004713 184.0
BYD3_k127_8469766_8 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000003345 103.0
BYD3_k127_8469766_9 nuclear chromosome segregation - - - 0.000000005027 61.0
BYD3_k127_8521706_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007015 594.0
BYD3_k127_8523112_0 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 409.0
BYD3_k127_8523112_1 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000005219 217.0
BYD3_k127_8523112_2 LVIVD repeat - - - 0.00000004025 67.0
BYD3_k127_8558627_0 DEAD DEAH box helicase K03724 - - 0.0 1335.0
BYD3_k127_8558627_1 Beta-eliminating lyase K01667 - 4.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 611.0
BYD3_k127_8558627_10 protein trimerization - - - 0.000000000000000000000000000000000000001178 152.0
BYD3_k127_8558627_11 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000004715 141.0
BYD3_k127_8558627_12 response regulator receiver - - - 0.0000000000000000000000000000000000006336 161.0
BYD3_k127_8558627_13 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000004051 138.0
BYD3_k127_8558627_14 unfolded protein binding - - - 0.0000000000000000000000004144 122.0
BYD3_k127_8558627_15 - - - - 0.00000000000000000000001034 119.0
BYD3_k127_8558627_16 Sulfurtransferase - - - 0.00000000000000000000001186 101.0
BYD3_k127_8558627_2 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 525.0
BYD3_k127_8558627_3 AcrB/AcrD/AcrF family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 334.0
BYD3_k127_8558627_4 Di-haem oxidoreductase, putative peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007574 301.0
BYD3_k127_8558627_5 N-acetylglucosaminylinositol deacetylase activity K22135 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002371 274.0
BYD3_k127_8558627_6 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07104 - 1.13.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000001507 254.0
BYD3_k127_8558627_7 Phosphodiester glycosidase - - - 0.00000000000000000000000000000000000000000000000000002234 203.0
BYD3_k127_8558627_8 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.00000000000000000000000000000000000000000001021 169.0
BYD3_k127_8558627_9 protein conserved in bacteria K04750 - - 0.0000000000000000000000000000000000000003797 167.0
BYD3_k127_8658180_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007959 614.0
BYD3_k127_8658180_1 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 570.0
BYD3_k127_8658180_10 Pfam Transposase IS66 - - - 0.0000000000000000000000000000000000000000000000000000000000003723 227.0
BYD3_k127_8658180_11 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000001568 198.0
BYD3_k127_8658180_12 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000005076 173.0
BYD3_k127_8658180_13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000179 163.0
BYD3_k127_8658180_14 PFAM General secretory system II protein E domain protein - - - 0.00000000000000000000002659 115.0
BYD3_k127_8658180_15 PAP2 superfamily - - - 0.0000000000001037 82.0
BYD3_k127_8658180_16 Anthranilate synthase component I domain protein K01665 - 2.6.1.85 0.0000005292 59.0
BYD3_k127_8658180_17 Cell wall-active antibiotics response 4TMS YvqF - - - 0.0006968 44.0
BYD3_k127_8658180_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006859 438.0
BYD3_k127_8658180_3 twitching motility protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 415.0
BYD3_k127_8658180_4 PFAM Coenzyme A transferase K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006976 350.0
BYD3_k127_8658180_5 Zinc-uptake complex component A periplasmic K02077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 295.0
BYD3_k127_8658180_6 Enoyl-(Acyl carrier protein) reductase K10780 - 1.3.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002531 275.0
BYD3_k127_8658180_7 ABC 3 transport family K02075,K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006176 273.0
BYD3_k127_8658180_8 Tfp pilus assembly protein FimV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001044 268.0
BYD3_k127_8658180_9 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006903 259.0
BYD3_k127_8678505_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000001767 221.0
BYD3_k127_8678505_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000002353 109.0
BYD3_k127_8678505_2 ABC-2 family transporter protein - - - 0.00000000000003429 78.0
BYD3_k127_8678505_3 Type II transport protein GspH K08084 - - 0.000002397 56.0
BYD3_k127_8788740_0 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000002531 170.0
BYD3_k127_8788740_1 Universal stress protein family K07090 - - 0.000000000000007478 80.0
BYD3_k127_8788740_2 phosphorelay signal transduction system K01768,K10941,K21405 - 4.6.1.1 0.0005507 48.0
BYD3_k127_8789197_0 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002273 261.0
BYD3_k127_8789197_1 glycosyl transferase group 1 K00754 - - 0.000000000000000000000000000000000000000000000000000000168 204.0
BYD3_k127_8789197_2 Surface antigen K07277 - - 0.000000000000000000000000000000000000000000000001057 197.0
BYD3_k127_8789197_3 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000002843 72.0
BYD3_k127_8789197_4 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 0.00004167 49.0
BYD3_k127_8793578_0 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 518.0
BYD3_k127_8793578_1 6-phosphofructokinase activity K00850,K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 437.0
BYD3_k127_8793578_10 Ethylbenzene dehydrogenase - - - 0.0002839 53.0
BYD3_k127_8793578_11 peptidase activity, acting on L-amino acid peptides K01448,K07260,K09955,K13276 GO:0005575,GO:0005576 3.4.17.14,3.5.1.28 0.0006831 50.0
BYD3_k127_8793578_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007153 430.0
BYD3_k127_8793578_3 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 423.0
BYD3_k127_8793578_4 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005005 278.0
BYD3_k127_8793578_5 Putative modulator of DNA gyrase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003665 274.0
BYD3_k127_8793578_6 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000002738 203.0
BYD3_k127_8793578_7 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000009851 203.0
BYD3_k127_8793578_8 - - - - 0.000000000000000000002989 110.0
BYD3_k127_8793578_9 Peptidase M56 - - - 0.000000000000000005428 98.0
BYD3_k127_8795656_0 Glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 349.0
BYD3_k127_8795656_1 Alginate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 336.0
BYD3_k127_8795656_2 CobQ CobB MinD ParA nucleotide binding domain K16554,K16692 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001246 282.0
BYD3_k127_8795656_3 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000008368 177.0
BYD3_k127_8795656_4 PFAM O-antigen polymerase - - - 0.0000000000000000000000000000000001092 151.0
BYD3_k127_8795656_5 PFAM Polysaccharide deacetylase - - - 0.000000000000000000000000000004656 139.0
BYD3_k127_8795656_6 SLBB domain K01991 - - 0.0000000000006113 76.0
BYD3_k127_8807217_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate K03701 - - 2.041e-266 835.0
BYD3_k127_8831252_0 Divalent cation transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 533.0
BYD3_k127_8831252_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 308.0
BYD3_k127_8831252_2 Elongator protein 3, MiaB family, Radical SAM K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000001471 216.0
BYD3_k127_8831252_3 endonuclease activity K07451 - - 0.00000000000000000000000000000000000000000147 174.0
BYD3_k127_8842711_0 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002586 263.0
BYD3_k127_8842711_1 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000003247 121.0
BYD3_k127_8888_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 471.0
BYD3_k127_8888_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 434.0
BYD3_k127_8888_2 - - - - 0.000000000000000000000000000000000000000000001305 174.0
BYD3_k127_8888_3 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000003855 156.0
BYD3_k127_8939685_0 Catalyzes the NAD( )-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non- methylotrophic organisms K00122 - 1.17.1.9 3.337e-229 713.0
BYD3_k127_8939685_1 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005937 583.0
BYD3_k127_8939685_11 DinB superfamily - - - 0.0000000000000000000000000000000000000001199 164.0
BYD3_k127_8939685_12 glyoxalase III activity - - - 0.000000000000000000000000000000000000006486 156.0
BYD3_k127_8939685_13 DNA-binding transcription factor activity - - - 0.00000000000000000000000000001395 124.0
BYD3_k127_8939685_14 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000008244 121.0
BYD3_k127_8939685_15 FR47-like protein - - - 0.000001111 59.0
BYD3_k127_8939685_16 - - - - 0.00005438 54.0
BYD3_k127_8939685_2 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 563.0
BYD3_k127_8939685_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006919 390.0
BYD3_k127_8939685_4 Bacterial protein of unknown function (DUF899) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 317.0
BYD3_k127_8939685_5 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002026 294.0
BYD3_k127_8939685_6 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000002411 226.0
BYD3_k127_8939685_7 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000001017 209.0
BYD3_k127_8939685_8 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000007315 196.0
BYD3_k127_8939685_9 - K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000004591 184.0
BYD3_k127_8946219_0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 2.08e-254 798.0
BYD3_k127_8946219_1 GTP-binding protein TypA K06207 - - 1.033e-205 656.0
BYD3_k127_8946219_10 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000004404 90.0
BYD3_k127_8946219_11 protein conserved in bacteria K09955 - - 0.00000000007916 75.0
BYD3_k127_8946219_12 MerR HTH family regulatory protein - - - 0.000000001653 64.0
BYD3_k127_8946219_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0000988,GO:0000990,GO:0002791,GO:0003674,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032879,GO:0032880,GO:0043254,GO:0044087,GO:0044419,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051223,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070201,GO:0080090,GO:0090087,GO:0140110,GO:1903506,GO:1903530,GO:2000112,GO:2000142,GO:2001141 - 0.0000001463 60.0
BYD3_k127_8946219_2 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 351.0
BYD3_k127_8946219_3 DnaJ molecular chaperone homology domain K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008343 289.0
BYD3_k127_8946219_4 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004223 273.0
BYD3_k127_8946219_5 Domain of unknown function (DUF4185) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001122 268.0
BYD3_k127_8946219_6 crp fnr family K01420 - - 0.000000000000000000000000000000000000000000000008284 185.0
BYD3_k127_8946219_7 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000000000000008272 158.0
BYD3_k127_8946219_8 Bacterial PH domain K08981 - - 0.0000000000000000000000001848 123.0
BYD3_k127_8946219_9 iron ion binding - - - 0.000000000000000000000002558 111.0
BYD3_k127_8957053_0 Glycosyl transferase, family 2 K21349 - 2.4.1.268 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 477.0
BYD3_k127_8957053_1 transferase activity, transferring glycosyl groups K13693 - 2.4.1.266 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 461.0
BYD3_k127_8957053_10 PFAM Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001286 239.0
BYD3_k127_8957053_11 Binding-protein-dependent transport system inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000003145 240.0
BYD3_k127_8957053_12 mannosylglycerate metabolic process K05947,K07026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050897 2.4.1.217,3.1.3.70 0.000000000000000000000000000000000000000000000000000003879 203.0
BYD3_k127_8957053_13 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000009826 165.0
BYD3_k127_8957053_14 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 - - 0.000000000000000000000000000000001495 139.0
BYD3_k127_8957053_15 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000001631 112.0
BYD3_k127_8957053_16 transmembrane transport - - - 0.0000000000000000000000001046 124.0
BYD3_k127_8957053_17 - - - - 0.0000000000000000000000001359 108.0
BYD3_k127_8957053_18 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.0000000000000000000007206 112.0
BYD3_k127_8957053_19 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.00000000000000000000469 101.0
BYD3_k127_8957053_2 ABC-type sugar transport system periplasmic component K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 408.0
BYD3_k127_8957053_20 Bacterial regulatory proteins, tetR family K18301 - - 0.00000000004007 71.0
BYD3_k127_8957053_21 Histidine kinase - - - 0.00000000125 60.0
BYD3_k127_8957053_22 PFAM Peptidase family M20 M25 M40 - - - 0.0002442 53.0
BYD3_k127_8957053_3 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 389.0
BYD3_k127_8957053_4 Belongs to the ABC transporter superfamily K05816 - 3.6.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 312.0
BYD3_k127_8957053_5 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 291.0
BYD3_k127_8957053_6 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009865 297.0
BYD3_k127_8957053_7 PFAM Binding-protein-dependent transport system inner membrane component K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006796 282.0
BYD3_k127_8957053_8 MOFRL family K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000274 270.0
BYD3_k127_8957053_9 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001149 257.0
BYD3_k127_9055197_0 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 2.922e-222 714.0
BYD3_k127_9055197_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 629.0
BYD3_k127_9055197_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.6.5.3 0.00000000000000000000000000000000000003182 147.0
BYD3_k127_9055197_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000008768 154.0
BYD3_k127_9055197_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000054 126.0
BYD3_k127_9055197_13 peptidase M42 family protein K01179 - 3.2.1.4 0.000000000000000000000000001303 130.0
BYD3_k127_9055197_14 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000007167 121.0
BYD3_k127_9055197_15 CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000007326 90.0
BYD3_k127_9055197_16 PFAM Glycosyl transferase, group 1 - - - 0.00000001434 68.0
BYD3_k127_9055197_18 long-chain fatty acid transport protein - - - 0.000001638 59.0
BYD3_k127_9055197_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 451.0
BYD3_k127_9055197_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 400.0
BYD3_k127_9055197_4 Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 400.0
BYD3_k127_9055197_5 M42 glutamyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008612 302.0
BYD3_k127_9055197_6 PFAM Amidohydrolase 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005957 303.0
BYD3_k127_9055197_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004873 280.0
BYD3_k127_9055197_8 M42 glutamyl aminopeptidase K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007137 288.0
BYD3_k127_9055197_9 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000002148 160.0
BYD3_k127_909937_0 COG4257 Streptogramin lyase K18235 - - 0.00000000000000000001176 104.0
BYD3_k127_909937_1 EamA-like transporter family K15269 - - 0.0004865 51.0
BYD3_k127_975096_0 Protein of unknown function, DUF255 K06888 - - 6.846e-240 778.0
BYD3_k127_975096_1 PFAM FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 612.0
BYD3_k127_975096_2 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 388.0
BYD3_k127_975096_3 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008949 350.0
BYD3_k127_975096_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 304.0
BYD3_k127_975096_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002627 259.0
BYD3_k127_975096_6 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - - 0.0000000000000000000000000000000000000000000000000000003276 204.0
BYD3_k127_975096_7 TPR repeat - - - 0.0000000000000000004765 98.0
BYD3_k127_975096_8 - - - - 0.00000000000000626 83.0
BYD3_k127_975096_9 peptidyl-tyrosine sulfation K02498 - - 0.000006049 59.0
BYD3_k127_984106_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000002685 267.0
BYD3_k127_984106_1 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000001704 152.0
BYD3_k127_984106_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000001026 50.0