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Overview

ID MAG00109
Name BYD3_bin.20
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Gemmatimonadota
Class Gemmatimonadetes
Order Gemmatimonadales
Family GWC2-71-9
Genus JACDDX01
Species
Assembly information
Completeness (%) 74.39
Contamination (%) 0.56
GC content (%) 71.0
N50 (bp) 14,064
Genome size (bp) 2,655,404

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2343

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1005979_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 606.0
BYD3_k127_1005979_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 352.0
BYD3_k127_1005979_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000044 234.0
BYD3_k127_1041599_0 E1-E2 ATPase K01533 - 3.6.3.4 2.614e-295 927.0
BYD3_k127_1041599_1 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 541.0
BYD3_k127_1041599_2 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 482.0
BYD3_k127_1041599_3 Metallopeptidase family M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000819 413.0
BYD3_k127_1041599_4 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001821 243.0
BYD3_k127_1041599_5 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000000000000000000000002017 128.0
BYD3_k127_1041599_6 Protein of unknown function (DUF3574) - - - 0.00000000000000000000000000000002759 132.0
BYD3_k127_1041599_7 SnoaL-like polyketide cyclase - - - 0.000001215 54.0
BYD3_k127_1068067_0 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006329 490.0
BYD3_k127_1068067_1 Serine aminopeptidase, S33 K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000004743 243.0
BYD3_k127_1068067_2 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000965 237.0
BYD3_k127_1068067_3 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000000000000003376 218.0
BYD3_k127_1068067_4 Domain of unknown function (DUF3291) - - - 0.00000000000000000000000000000000000000000000000008443 184.0
BYD3_k127_1068067_6 PFAM Ion transport protein K10716 - - 0.00000000000000000000000000000217 129.0
BYD3_k127_1068067_8 Sodium:alanine symporter family K03310 - - 0.00000288 49.0
BYD3_k127_1074230_0 N-Acetylmuramoyl-L-alanine amidase K01187 - 3.2.1.20 1.059e-286 895.0
BYD3_k127_1074230_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 7.117e-256 800.0
BYD3_k127_1074230_2 Major Facilitator K16211 - - 8.232e-204 647.0
BYD3_k127_1074230_3 Alpha-amylase domain K01176 - 3.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 603.0
BYD3_k127_1074230_4 Domain of unknown function (DUF4982) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 572.0
BYD3_k127_1074230_5 - - - - 0.000000000000001707 79.0
BYD3_k127_111668_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 540.0
BYD3_k127_111668_1 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 418.0
BYD3_k127_111668_2 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 370.0
BYD3_k127_111668_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 350.0
BYD3_k127_111668_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000004997 273.0
BYD3_k127_111668_5 TIGRFAM intracellular protease, PfpI family K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000004911 227.0
BYD3_k127_111668_6 Mazg nucleotide pyrophosphohydrolase K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000006642 176.0
BYD3_k127_111668_7 - - - - 0.000000000006912 78.0
BYD3_k127_111668_8 - - - - 0.00000000004185 66.0
BYD3_k127_1120214_0 tail specific protease K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 431.0
BYD3_k127_1120214_1 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 306.0
BYD3_k127_1120214_2 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.00000000000000000000000000002755 129.0
BYD3_k127_1120214_3 Rossmann-like domain - - - 0.00000000000000000000000000004134 128.0
BYD3_k127_1120214_4 tail specific protease K03797 - 3.4.21.102 0.00001126 49.0
BYD3_k127_113487_0 amine dehydrogenase activity K17285 - - 1.733e-249 778.0
BYD3_k127_113487_1 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 512.0
BYD3_k127_113487_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 512.0
BYD3_k127_113487_3 - - - - 0.000000000000000000000000000000000000000000000002449 192.0
BYD3_k127_113487_4 membrane - - - 0.0000000000000000000000000000000005403 136.0
BYD3_k127_1163566_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 6.276e-218 716.0
BYD3_k127_1163566_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 479.0
BYD3_k127_1163566_2 Nucleotidyl transferase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 331.0
BYD3_k127_1163566_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 313.0
BYD3_k127_1163566_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007024 282.0
BYD3_k127_1163566_5 Sugar nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000006344 241.0
BYD3_k127_1163566_6 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000002654 197.0
BYD3_k127_1163566_7 - - - - 0.000000000000002845 83.0
BYD3_k127_1163566_8 Roadblock/LC7 domain K07131 - - 0.00000002214 60.0
BYD3_k127_1163566_9 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000253 56.0
BYD3_k127_1195140_0 HELICc2 K03722 - 3.6.4.12 6.154e-275 871.0
BYD3_k127_1195140_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 527.0
BYD3_k127_1195140_2 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000294 250.0
BYD3_k127_1195140_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division K20543 - - 0.0000000000000000004935 98.0
BYD3_k127_1195140_4 Aminotransferase class I and II K10206 - 2.6.1.83 0.0000000000007089 77.0
BYD3_k127_1256960_0 5TM C-terminal transporter carbon starvation CstA K06200 - - 2.076e-294 916.0
BYD3_k127_1256960_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041 460.0
BYD3_k127_1256960_10 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000001407 222.0
BYD3_k127_1256960_11 SprT-like family - - - 0.00000000000000000000000000000000000000007465 169.0
BYD3_k127_1256960_12 - - - - 0.000000000000000000000000000003241 137.0
BYD3_k127_1256960_13 PFAM regulatory protein AsnC Lrp family K03719 - - 0.00000000000000000000000000001169 124.0
BYD3_k127_1256960_14 - - - - 0.00000000000000000000000000006705 133.0
BYD3_k127_1256960_15 NmrA-like family - - - 0.00000002521 56.0
BYD3_k127_1256960_16 Selenoprotein, putative - - - 0.0000009226 53.0
BYD3_k127_1256960_17 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K15778 - 5.4.2.2,5.4.2.8 0.0002651 49.0
BYD3_k127_1256960_18 Histidine kinase - - - 0.0007093 49.0
BYD3_k127_1256960_2 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 443.0
BYD3_k127_1256960_3 Putative zinc-binding metallo-peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 436.0
BYD3_k127_1256960_4 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 411.0
BYD3_k127_1256960_5 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009176 307.0
BYD3_k127_1256960_6 PFAM diacylglycerol kinase catalytic region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 291.0
BYD3_k127_1256960_7 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006662 264.0
BYD3_k127_1256960_8 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000004959 240.0
BYD3_k127_1256960_9 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000001001 224.0
BYD3_k127_1285832_0 DNA ligase N terminus K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 2.296e-205 666.0
BYD3_k127_1285832_1 RNA secondary structure unwinding K03724 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 578.0
BYD3_k127_1285832_2 Exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000353 493.0
BYD3_k127_1285832_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 343.0
BYD3_k127_1285832_4 - - - - 0.0000000000000000000000000000000000002388 142.0
BYD3_k127_1285832_5 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.000000000001046 68.0
BYD3_k127_1325350_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 445.0
BYD3_k127_1325350_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 419.0
BYD3_k127_1325350_10 Peptidase dimerisation domain K01438,K01439 - 3.5.1.16,3.5.1.18 0.00000000000000000000000001607 115.0
BYD3_k127_1325350_2 palmitoyl-(protein) hydrolase activity K06999,K15975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 368.0
BYD3_k127_1325350_3 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 340.0
BYD3_k127_1325350_4 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 323.0
BYD3_k127_1325350_5 Belongs to the ATCase OTCase family K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0043857,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 306.0
BYD3_k127_1325350_6 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009419 282.0
BYD3_k127_1325350_7 penicillin binding K05367 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000001146 270.0
BYD3_k127_1325350_8 Phospholipase/Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000008578 236.0
BYD3_k127_1325350_9 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000009748 226.0
BYD3_k127_1339428_0 chelatase, subunit ChlI K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 607.0
BYD3_k127_1339428_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 403.0
BYD3_k127_1339428_2 tail specific protease K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001003 294.0
BYD3_k127_1345589_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 387.0
BYD3_k127_1345589_1 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 374.0
BYD3_k127_1345589_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 362.0
BYD3_k127_1345589_3 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 329.0
BYD3_k127_1358004_0 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 556.0
BYD3_k127_1358004_1 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000053 261.0
BYD3_k127_1358004_2 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000005544 211.0
BYD3_k127_1358004_3 lyase activity - - - 0.000000000000000000000005176 119.0
BYD3_k127_1369841_0 bacterial-type flagellum-dependent cell motility - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 477.0
BYD3_k127_1369841_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K15975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 443.0
BYD3_k127_1369841_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005485 427.0
BYD3_k127_1369841_3 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 352.0
BYD3_k127_1369841_4 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002792 276.0
BYD3_k127_1369841_5 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000002819 263.0
BYD3_k127_1369841_7 GHMP kinase - - - 0.00000000000000000000000000000003362 139.0
BYD3_k127_1369841_8 response to abiotic stimulus K01243,K06867 - 3.2.2.9 0.00000000000000000008839 99.0
BYD3_k127_1373497_0 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 368.0
BYD3_k127_1373497_2 DinB family - - - 0.000000000000000000000000000000058 134.0
BYD3_k127_1373497_3 Protein of unknown function (DUF983) - - - 0.00000000000000000000000000002041 125.0
BYD3_k127_1373497_4 Histidine kinase - - - 0.0000000000000000005458 93.0
BYD3_k127_143499_0 TonB dependent receptor K16090 - - 1.275e-241 772.0
BYD3_k127_143499_1 PFAM Malic enzyme, NAD binding domain K00029 - 1.1.1.40 6.96e-200 651.0
BYD3_k127_143499_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000002113 222.0
BYD3_k127_143499_11 glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000007311 196.0
BYD3_k127_143499_12 Putative stress-induced transcription regulator - - - 0.0000000000000000000000000002229 122.0
BYD3_k127_143499_13 protein histidine kinase activity - - - 0.0000000000000000000008788 103.0
BYD3_k127_143499_2 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 435.0
BYD3_k127_143499_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009398 408.0
BYD3_k127_143499_4 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009792 384.0
BYD3_k127_143499_5 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 364.0
BYD3_k127_143499_6 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004488 332.0
BYD3_k127_143499_7 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002725 286.0
BYD3_k127_143499_8 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005404 261.0
BYD3_k127_143499_9 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000001091 253.0
BYD3_k127_1531696_0 Aminotransferase class-III K09251 - 2.6.1.82 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 511.0
BYD3_k127_1531696_1 Aminotransferase class-III K00823,K07250 - 2.6.1.19,2.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006669 486.0
BYD3_k127_1531696_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 349.0
BYD3_k127_1531696_3 PFAM binding-protein-dependent transport systems inner membrane component K11071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 315.0
BYD3_k127_1531696_4 Bacterial extracellular solute-binding protein K11069 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 320.0
BYD3_k127_1531696_5 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 321.0
BYD3_k127_1531696_6 COG1177 ABC-type spermidine putrescine transport system, permease component II K11070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002577 257.0
BYD3_k127_1531696_7 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000256 199.0
BYD3_k127_1532943_0 tRNA synthetases class I (M) K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 546.0
BYD3_k127_1532943_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 451.0
BYD3_k127_1532943_2 PSP1 C-terminal conserved region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008482 334.0
BYD3_k127_1532943_3 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 311.0
BYD3_k127_1532943_4 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000002582 190.0
BYD3_k127_1532943_5 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000006698 186.0
BYD3_k127_1532943_6 TPM domain K06872 - - 0.000000000000000000000000000000000004753 150.0
BYD3_k127_1532943_7 PFAM DSBA oxidoreductase - - - 0.00000000000000000000000000000004663 136.0
BYD3_k127_1532943_8 nucleotidyltransferase activity - - - 0.0000000000000000000156 106.0
BYD3_k127_1532943_9 Helix-hairpin-helix motif K02337 - 2.7.7.7 0.0000000000106 68.0
BYD3_k127_1539672_0 Sugar (and other) transporter K03762 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 367.0
BYD3_k127_1539672_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000001092 199.0
BYD3_k127_1539672_2 DinB superfamily - - - 0.00000000000000000000000000000000000000001851 159.0
BYD3_k127_1539672_3 - - - - 0.000000001915 61.0
BYD3_k127_1643783_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 3.056e-194 613.0
BYD3_k127_1643783_1 Adenylosuccinate lyase C-terminus K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008744 555.0
BYD3_k127_1643783_10 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006439 278.0
BYD3_k127_1643783_11 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000001149 257.0
BYD3_k127_1643783_12 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000002971 222.0
BYD3_k127_1643783_13 Tryptophan synthase alpha chain K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000003443 214.0
BYD3_k127_1643783_14 Indole-3-glycerol phosphate synthase K01609 GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004425,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043167,GO:0043169,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046219,GO:0046391,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0071944,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48 0.000000000000000000000000000000000000000000000000000005249 199.0
BYD3_k127_1643783_15 HD superfamily hydrolase involved in NAD metabolism K00950 - 2.7.6.3 0.000000000000000000000000000000000006812 151.0
BYD3_k127_1643783_16 HD superfamily hydrolase involved in NAD metabolism K00950 - 2.7.6.3 0.00000000000000000000000000000002631 147.0
BYD3_k127_1643783_17 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.00000000000000000000000000000004663 136.0
BYD3_k127_1643783_18 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.00000000000000000000000706 119.0
BYD3_k127_1643783_19 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.00000000000000000000009039 109.0
BYD3_k127_1643783_2 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004376 452.0
BYD3_k127_1643783_20 LytR cell envelope-related transcriptional attenuator - - - 0.0000004601 61.0
BYD3_k127_1643783_3 Trypsin K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009773 386.0
BYD3_k127_1643783_4 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004774 392.0
BYD3_k127_1643783_5 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 329.0
BYD3_k127_1643783_6 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 306.0
BYD3_k127_1643783_7 HEAT repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 312.0
BYD3_k127_1643783_8 MOFRL family K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006563 287.0
BYD3_k127_1643783_9 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001782 273.0
BYD3_k127_1644047_0 Glutamine synthetase type III K01915 - 6.3.1.2 1.801e-273 859.0
BYD3_k127_1644047_1 KaiC K08482 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 569.0
BYD3_k127_1644047_10 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K22110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 317.0
BYD3_k127_1644047_11 ADP-ribosylglycohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007043 272.0
BYD3_k127_1644047_12 Amino acid permease K20265 - - 0.0000000000000000000000000000005285 126.0
BYD3_k127_1644047_13 Resolvase, N terminal domain - - - 0.000001979 49.0
BYD3_k127_1644047_2 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 569.0
BYD3_k127_1644047_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 541.0
BYD3_k127_1644047_4 Coenzyme A transferase K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009763 409.0
BYD3_k127_1644047_5 Aminotransferase class-III K03851,K15372 - 2.6.1.55,2.6.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 410.0
BYD3_k127_1644047_6 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 367.0
BYD3_k127_1644047_7 Coenzyme A transferase K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 339.0
BYD3_k127_1644047_8 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 346.0
BYD3_k127_1644047_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 327.0
BYD3_k127_1650619_0 GNAT family acetyltransferase K03802 - 6.3.2.29,6.3.2.30 0.0 1333.0
BYD3_k127_1650619_1 Putative diguanylate phosphodiesterase - - - 5.844e-195 640.0
BYD3_k127_1650619_2 Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation K01305 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008270,GO:0008798,GO:0016787,GO:0019538,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 517.0
BYD3_k127_1650619_3 Mur ligase family, glutamate ligase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008578 458.0
BYD3_k127_1650619_4 Peptidase family S51 K13282 - 3.4.15.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 334.0
BYD3_k127_1650619_5 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000242 169.0
BYD3_k127_1650619_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000006991 119.0
BYD3_k127_1650619_7 chemotaxis protein K03406 - - 0.00000000000000000000004913 117.0
BYD3_k127_1760298_0 Heparinase II/III-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 495.0
BYD3_k127_1760298_1 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 366.0
BYD3_k127_1760298_2 Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000001475 280.0
BYD3_k127_1760298_3 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000003656 222.0
BYD3_k127_1760298_4 Dihydrodipicolinate synthetase family - - - 0.0000000000000000000000000000000000000000000000107 191.0
BYD3_k127_1760298_5 GHMP kinase - - - 0.00000000000000000000000000001321 125.0
BYD3_k127_1792957_0 Putative cyclase K07130 GO:0003674,GO:0003824,GO:0004061,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.00000000000000000000000000005204 117.0
BYD3_k127_1792957_1 subunit of a heme lyase K02200 - - 0.00000000000000000000001485 111.0
BYD3_k127_1792957_2 - - - - 0.00000000000000000001504 104.0
BYD3_k127_1792957_3 Cytochrome c-type biogenesis protein CcmF C-terminal K02198 - - 0.00000000000000001715 84.0
BYD3_k127_1952108_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 395.0
BYD3_k127_1952108_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006076 284.0
BYD3_k127_1952108_2 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000006473 186.0
BYD3_k127_1952108_3 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000007993 177.0
BYD3_k127_1952108_4 DinB family - - - 0.0000000000000000000000000000000000000008465 153.0
BYD3_k127_1952108_6 Protein of unknown function (DUF4230) - - - 0.00000001151 66.0
BYD3_k127_1984125_0 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 6.394e-282 875.0
BYD3_k127_1984125_1 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 2.373e-220 693.0
BYD3_k127_1984125_2 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 377.0
BYD3_k127_1984125_3 3-isopropylmalate dehydratase activity K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000001457 173.0
BYD3_k127_2111951_0 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 443.0
BYD3_k127_2111951_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 443.0
BYD3_k127_2111951_2 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000178 290.0
BYD3_k127_2111951_3 Bacterial transcriptional activator domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000001537 263.0
BYD3_k127_2111951_4 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000003433 247.0
BYD3_k127_2111951_5 Esterase PHB depolymerase - - - 0.0000000000000000000000000000000000000000000000000000000000696 215.0
BYD3_k127_2111951_6 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000005746 209.0
BYD3_k127_2111951_7 Polysaccharide deacetylase - - - 0.000000000000005294 89.0
BYD3_k127_2111951_8 N-acetyltransferase - - - 0.00001727 55.0
BYD3_k127_2117621_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1463.0
BYD3_k127_2117621_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006608 557.0
BYD3_k127_2117621_10 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000001311 242.0
BYD3_k127_2117621_11 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000003296 224.0
BYD3_k127_2117621_12 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000001987 215.0
BYD3_k127_2117621_13 Telomere recombination K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000001302 210.0
BYD3_k127_2117621_14 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000009461 192.0
BYD3_k127_2117621_15 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000003499 189.0
BYD3_k127_2117621_16 Low molecular weight phosphatase family K01104 - 3.1.3.48 0.000000000000000000000000000000000000000003308 160.0
BYD3_k127_2117621_17 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000002499 166.0
BYD3_k127_2117621_18 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000001714 143.0
BYD3_k127_2117621_19 Phosphoribosyl transferase domain - - - 0.00000000000000000000000005001 122.0
BYD3_k127_2117621_2 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 524.0
BYD3_k127_2117621_20 Major Facilitator Superfamily - - - 0.000000000000000000000001032 105.0
BYD3_k127_2117621_21 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits - - - 0.00000000000000006444 85.0
BYD3_k127_2117621_22 TonB-dependent Receptor Plug Domain - - - 0.0000000000003847 83.0
BYD3_k127_2117621_3 Phosphoglycerate kinase K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006241 517.0
BYD3_k127_2117621_4 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 486.0
BYD3_k127_2117621_5 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 450.0
BYD3_k127_2117621_6 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 420.0
BYD3_k127_2117621_7 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004625 351.0
BYD3_k127_2117621_8 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 317.0
BYD3_k127_2117621_9 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000176 260.0
BYD3_k127_2232258_0 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 390.0
BYD3_k127_2232258_1 Bacterial transcriptional activator domain - - - 0.000000000000000000000000003128 126.0
BYD3_k127_2232258_2 metallopeptidase activity - - - 0.0002915 49.0
BYD3_k127_2297779_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004515 515.0
BYD3_k127_2297779_1 TonB dependent receptor K16089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007612 398.0
BYD3_k127_2297779_2 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000006682 220.0
BYD3_k127_2297779_3 ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA - - - 0.0000000000000000000000000000000000000007562 166.0
BYD3_k127_2297779_4 - - - - 0.000000000000000003903 94.0
BYD3_k127_2297779_5 luxR family - - - 0.0000000000000003628 83.0
BYD3_k127_2300710_0 isocitrate dehydrogenase activity K00031 GO:0003674,GO:0003824,GO:0003862,GO:0004448,GO:0004450,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006520,GO:0006551,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0022900,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 1.973e-200 631.0
BYD3_k127_2300710_1 [isocitrate dehydrogenase (NADP+)] phosphatase activity K00906 GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004721,GO:0004722,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008772,GO:0009060,GO:0009987,GO:0015980,GO:0016208,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0016999,GO:0017076,GO:0017144,GO:0018105,GO:0018193,GO:0018209,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0035639,GO:0036094,GO:0036211,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046487,GO:0050790,GO:0055114,GO:0065007,GO:0065009,GO:0070262,GO:0071704,GO:0072350,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 580.0
BYD3_k127_2300710_2 S4 RNA-binding domain K04762 - - 0.00000000000000000000000000000000000002711 147.0
BYD3_k127_2306927_0 Clp amino terminal domain, pathogenicity island component K03696 - - 1.543e-197 632.0
BYD3_k127_2306927_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006639 516.0
BYD3_k127_2306927_10 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000002906 106.0
BYD3_k127_2306927_11 Trm112p-like protein K09791 - - 0.000000000000000003362 89.0
BYD3_k127_2306927_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004826 432.0
BYD3_k127_2306927_3 ATP:guanido phosphotransferase, C-terminal catalytic domain K19405 - 2.7.14.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000701 435.0
BYD3_k127_2306927_4 MacB-like periplasmic core domain K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008229 383.0
BYD3_k127_2306927_5 Diguanylate cyclase, GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 321.0
BYD3_k127_2306927_6 Sodium/calcium exchanger protein K07300 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008684 327.0
BYD3_k127_2306927_7 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000186 280.0
BYD3_k127_2306927_8 UvrB/uvrC motif K19411 - - 0.00000000000000000000000000000000000000000001043 167.0
BYD3_k127_2306927_9 - - - - 0.00000000000000000000000000000000000000004094 164.0
BYD3_k127_2308954_0 3-beta hydroxysteroid dehydrogenase/isomerase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 319.0
BYD3_k127_2308954_1 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 323.0
BYD3_k127_2308954_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000004601 78.0
BYD3_k127_2308954_11 LysM domain - - - 0.00000000004026 75.0
BYD3_k127_2308954_2 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000000000772 205.0
BYD3_k127_2308954_3 MotA/TolQ/ExbB proton channel family K03562 - - 0.0000000000000000000000000000000000000000000000000004264 199.0
BYD3_k127_2308954_4 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.00000000000000000000000000000000000002149 147.0
BYD3_k127_2308954_5 Outer membrane lipoprotein - - - 0.00000000000000000000000000000000001307 152.0
BYD3_k127_2308954_6 OmpA family K03640 - - 0.000000000000000000000000000000001355 141.0
BYD3_k127_2308954_7 TonB C terminal K03832 - - 0.0000000000000000000000000000001891 133.0
BYD3_k127_2308954_8 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000002577 109.0
BYD3_k127_2308954_9 Universal bacterial protein YeaZ K14742 - - 0.00000000000000000007608 99.0
BYD3_k127_2376965_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 360.0
BYD3_k127_2376965_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000002388 204.0
BYD3_k127_2376965_2 lipid kinase activity - - - 0.00000000000000000000000000000000000000000000000004668 189.0
BYD3_k127_2376965_3 response regulator - - - 0.0000000000000000000000000000000000000000000000002362 197.0
BYD3_k127_2376965_4 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000007133 162.0
BYD3_k127_2376965_5 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000004101 128.0
BYD3_k127_2376965_6 protein histidine kinase activity K02484,K07636 - 2.7.13.3 0.000000000000000000000007504 117.0
BYD3_k127_2376965_7 PFAM response regulator receiver - - - 0.0000001926 63.0
BYD3_k127_2376965_8 1,4-alpha-glucan branching enzyme activity K00700 - 2.4.1.18 0.0000008791 58.0
BYD3_k127_2447666_0 Belongs to the malate synthase family K01638 - 2.3.3.9 4.802e-227 715.0
BYD3_k127_2447666_1 ATP-binding region, ATPase domain protein domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009284 454.0
BYD3_k127_2447666_2 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007884 407.0
BYD3_k127_2447666_3 Glycosyltransferase, group 1 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007202 274.0
BYD3_k127_2447666_4 HAD-hyrolase-like K06019 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000001174 238.0
BYD3_k127_2447666_5 TIGRFAM channel protein, hemolysin III family K11068 - - 0.000000000000000000000000000000000000000000000000000000000268 209.0
BYD3_k127_2447666_6 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000000000007441 198.0
BYD3_k127_2447666_7 helicase - - - 0.0000000000000000005409 102.0
BYD3_k127_2447666_8 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.00000000000006425 81.0
BYD3_k127_2447666_9 DNA restriction-modification system - - - 0.0005687 47.0
BYD3_k127_2600076_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.117e-320 994.0
BYD3_k127_2600076_1 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 3.274e-280 890.0
BYD3_k127_2600076_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 4.127e-195 619.0
BYD3_k127_2600076_3 Acyl-CoA dehydrogenase, middle domain - GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 373.0
BYD3_k127_2600076_4 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000001444 150.0
BYD3_k127_2600076_5 Zinc metalloprotease K06402 - - 0.00000000000000000000000000000002241 128.0
BYD3_k127_2600076_6 - - - - 0.0002238 52.0
BYD3_k127_2612190_0 FtsX-like permease family K02004 - - 4.04e-197 651.0
BYD3_k127_2612190_1 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. EgtE subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005543 374.0
BYD3_k127_2612190_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 308.0
BYD3_k127_2612190_3 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000002853 224.0
BYD3_k127_2612190_4 FCD domain - - - 0.00000000000000000000000000000000006789 143.0
BYD3_k127_2612190_5 - - - - 0.0000000000000000000000000000008555 126.0
BYD3_k127_2612190_6 Calcineurin-like phosphoesterase - - - 0.00000000000000007795 81.0
BYD3_k127_2648506_0 phosphoenolpyruvate carboxykinase (diphosphate) activity K20370 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009987,GO:0016043,GO:0016829,GO:0016830,GO:0016831,GO:0022607,GO:0030585,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051259,GO:0051291,GO:0065003,GO:0070206,GO:0070208,GO:0071840 4.1.1.38 3.469e-227 719.0
BYD3_k127_2648506_1 Cupin 2, conserved barrel domain protein K04093,K19547 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016853,GO:0016860,GO:0016863,GO:0016999,GO:0017000,GO:0017144,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0046872,GO:0046914,GO:0050897 5.3.3.19,5.4.99.5 0.0000008475 53.0
BYD3_k127_2648506_2 Involved in the tonB-independent uptake of proteins K03641 - - 0.0009311 51.0
BYD3_k127_2648557_0 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 7.869e-200 634.0
BYD3_k127_2648557_1 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 350.0
BYD3_k127_2648557_2 dna ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005392 312.0
BYD3_k127_2648557_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 GO:0000726,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050790,GO:0050896,GO:0051340,GO:0051351,GO:0051716,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000001796 248.0
BYD3_k127_2648557_4 - - - - 0.000000000000000000000000000000002823 133.0
BYD3_k127_2648557_5 ATPases associated with a variety of cellular activities K05847 - - 0.0000000000000000000001162 102.0
BYD3_k127_2649986_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 544.0
BYD3_k127_2649986_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007297 499.0
BYD3_k127_2649986_10 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 308.0
BYD3_k127_2649986_11 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008369 284.0
BYD3_k127_2649986_12 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001649 269.0
BYD3_k127_2649986_13 Histidine biosynthesis protein K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000004045 210.0
BYD3_k127_2649986_14 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000000000000000000000000000000006639 205.0
BYD3_k127_2649986_15 - - - - 0.0000000000000000000000000000000000002374 152.0
BYD3_k127_2649986_16 - - - - 0.000000008468 60.0
BYD3_k127_2649986_17 Tetratricopeptide repeat - - - 0.0006645 53.0
BYD3_k127_2649986_18 Cell division protein FtsQ K03589 - - 0.0006739 50.0
BYD3_k127_2649986_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 434.0
BYD3_k127_2649986_3 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 439.0
BYD3_k127_2649986_4 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 419.0
BYD3_k127_2649986_5 Penicillin binding protein transpeptidase domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006481 409.0
BYD3_k127_2649986_6 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 392.0
BYD3_k127_2649986_7 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 336.0
BYD3_k127_2649986_8 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 337.0
BYD3_k127_2649986_9 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 309.0
BYD3_k127_2653203_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 5.645e-250 776.0
BYD3_k127_2653203_1 Saccharopine dehydrogenase C-terminal domain K19064 - 1.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 466.0
BYD3_k127_2653203_10 Thioredoxin - - - 0.0000000000000000000000000000000000000001088 168.0
BYD3_k127_2653203_11 COG3668 Plasmid stabilization system protein - - - 0.00000000000000000000000000000003872 128.0
BYD3_k127_2653203_12 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000006569 121.0
BYD3_k127_2653203_13 arsR family - GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043254,GO:0044087,GO:0044212,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0090034,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000002104 96.0
BYD3_k127_2653203_14 - - - - 0.00000000000000004798 87.0
BYD3_k127_2653203_15 transcriptional regulator - - - 0.00000000001723 72.0
BYD3_k127_2653203_16 Calcineurin-like phosphoesterase - - - 0.0003925 52.0
BYD3_k127_2653203_17 WD40-like Beta Propeller Repeat - - - 0.0004613 51.0
BYD3_k127_2653203_18 - - - - 0.0005335 50.0
BYD3_k127_2653203_2 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 388.0
BYD3_k127_2653203_3 Catalyzes the sodium-dependent transport of glutamate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 362.0
BYD3_k127_2653203_4 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003509 337.0
BYD3_k127_2653203_5 divalent heavy-metal cations transporter K07238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008243 282.0
BYD3_k127_2653203_6 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000004477 251.0
BYD3_k127_2653203_7 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000002455 208.0
BYD3_k127_2653203_8 gluconolactonase activity K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000007986 198.0
BYD3_k127_2653203_9 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01955 - 6.3.5.5 0.00000000000000000000000000000000000000000000000003851 201.0
BYD3_k127_2654226_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 5.302e-319 1008.0
BYD3_k127_2654226_1 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 537.0
BYD3_k127_2654226_10 - - - - 0.00000000000000003161 93.0
BYD3_k127_2654226_11 outer membrane efflux protein - - - 0.000000000000001578 91.0
BYD3_k127_2654226_12 Involved in the tonB-independent uptake of proteins K03641 - - 0.000001428 55.0
BYD3_k127_2654226_13 - - - - 0.00001173 56.0
BYD3_k127_2654226_2 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000002355 226.0
BYD3_k127_2654226_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000116 221.0
BYD3_k127_2654226_4 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000001387 188.0
BYD3_k127_2654226_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000006064 194.0
BYD3_k127_2654226_6 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000009171 197.0
BYD3_k127_2654226_7 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000001367 118.0
BYD3_k127_2654226_8 - - - - 0.000000000000000000000000005462 120.0
BYD3_k127_2654226_9 Copper binding proteins, plastocyanin/azurin family K02638 - - 0.00000000000000000000128 100.0
BYD3_k127_2721604_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006 - 2.7.9.1 0.0 1052.0
BYD3_k127_2721604_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 3.186e-269 860.0
BYD3_k127_2721604_2 Glutamine amidotransferases class-II K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 499.0
BYD3_k127_2721604_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002036 274.0
BYD3_k127_2721604_4 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.000000000000000000000000000003836 126.0
BYD3_k127_2721604_5 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000006745 89.0
BYD3_k127_2721604_6 Transcription factor zinc-finger K09981 - - 0.0000000000000002973 90.0
BYD3_k127_2761191_0 Peptidase family M3 K01392 - 3.4.24.15 1.064e-207 675.0
BYD3_k127_2761191_1 Peptidase S9, prolyl oligopeptidase active site domain protein K01322 - 3.4.21.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009297 417.0
BYD3_k127_2761191_2 methylamine metabolic process K03885,K16937 - 1.6.99.3,1.8.5.2 0.0000000000000000000000009702 118.0
BYD3_k127_2771078_0 5'-nucleotidase, C-terminal domain K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 552.0
BYD3_k127_2771078_1 Protein of unknown function (DUF445) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 446.0
BYD3_k127_2771078_10 - - - - 0.0003326 54.0
BYD3_k127_2771078_2 Na dependent nucleoside transporter K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 427.0
BYD3_k127_2771078_3 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 346.0
BYD3_k127_2771078_4 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008989 297.0
BYD3_k127_2771078_5 Zn peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003004 259.0
BYD3_k127_2771078_6 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000001098 256.0
BYD3_k127_2771078_7 RNA 2'-O ribose methyltransferase substrate binding K03437 - - 0.0000000000000000000000000000000000000000000000000342 198.0
BYD3_k127_2771078_8 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000004487 188.0
BYD3_k127_2771078_9 Psort location Cytoplasmic, score 8.96 - - - 0.000000007097 70.0
BYD3_k127_290525_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003792 605.0
BYD3_k127_290525_1 Bacterial regulatory protein, Fis family K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 367.0
BYD3_k127_290525_2 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000008624 121.0
BYD3_k127_290525_3 Prokaryotic N-terminal methylation motif K02456,K02650,K02655 - - 0.00000000000000000000006114 105.0
BYD3_k127_290525_4 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02667 - - 0.00000000000007438 85.0
BYD3_k127_2908737_0 Beta-eliminating lyase K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 547.0
BYD3_k127_2908737_1 Zinc-binding dehydrogenase K00060 - 1.1.1.103 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 413.0
BYD3_k127_2908737_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000001472 252.0
BYD3_k127_2908737_3 Belongs to the DNA glycosylase MPG family K03652 GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 0.0000000000000000000000000000000000000000000001767 185.0
BYD3_k127_2908737_5 OST-HTH/LOTUS domain - - - 0.0000128 56.0
BYD3_k127_2940217_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 546.0
BYD3_k127_2940217_1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00263 - 1.4.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 492.0
BYD3_k127_2940217_2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 394.0
BYD3_k127_2940217_3 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000007504 259.0
BYD3_k127_2940217_4 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000005285 188.0
BYD3_k127_2940217_5 - - - - 0.0000000000000000000000000000000000002723 146.0
BYD3_k127_2940217_6 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000001135 131.0
BYD3_k127_2940217_7 - - - - 0.0000000000000000000000000002802 119.0
BYD3_k127_2960339_0 tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006758 590.0
BYD3_k127_2960339_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 549.0
BYD3_k127_2960339_10 - - - - 0.00000000000000000000000005305 121.0
BYD3_k127_2960339_11 Caspase domain - - - 0.0000000000000000005458 102.0
BYD3_k127_2960339_12 - - - - 0.0000000000001427 83.0
BYD3_k127_2960339_13 bacterial-type flagellum-dependent cell motility - - - 0.00000134 55.0
BYD3_k127_2960339_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 542.0
BYD3_k127_2960339_3 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 489.0
BYD3_k127_2960339_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008086 333.0
BYD3_k127_2960339_5 Competence protein K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002928 292.0
BYD3_k127_2960339_6 MazG nucleotide pyrophosphohydrolase domain K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000003974 262.0
BYD3_k127_2960339_7 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000001845 259.0
BYD3_k127_2960339_8 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000001035 190.0
BYD3_k127_2960339_9 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.00000000000000000000000000000000007527 137.0
BYD3_k127_2986394_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 3.842e-263 824.0
BYD3_k127_2986394_1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 - 4.1.1.98 3.991e-245 767.0
BYD3_k127_2986394_10 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000537 280.0
BYD3_k127_2986394_11 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000006043 258.0
BYD3_k127_2986394_12 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000006347 257.0
BYD3_k127_2986394_13 GIY-YIG type nucleases (URI domain) K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007768 276.0
BYD3_k127_2986394_14 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000001006 222.0
BYD3_k127_2986394_15 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000000006615 178.0
BYD3_k127_2986394_16 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000003553 172.0
BYD3_k127_2986394_17 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 GO:0000702,GO:0000703,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008270,GO:0008534,GO:0009987,GO:0016787,GO:0016788,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000741 157.0
BYD3_k127_2986394_18 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000002051 156.0
BYD3_k127_2986394_19 membrane K11622 - - 0.000000000000000000000000000000000003642 152.0
BYD3_k127_2986394_2 Cys/Met metabolism PLP-dependent enzyme K01758 - 4.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 524.0
BYD3_k127_2986394_20 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000002706 129.0
BYD3_k127_2986394_21 - - - - 0.00000000005789 70.0
BYD3_k127_2986394_22 - - - - 0.000002453 53.0
BYD3_k127_2986394_3 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 505.0
BYD3_k127_2986394_4 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008265 385.0
BYD3_k127_2986394_5 Chromate transporter K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 369.0
BYD3_k127_2986394_6 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006555 330.0
BYD3_k127_2986394_7 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006855 313.0
BYD3_k127_2986394_8 serine-type peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 299.0
BYD3_k127_2986394_9 UbiA prenyltransferase family K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009294 310.0
BYD3_k127_3015891_0 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 421.0
BYD3_k127_3015891_1 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000008328 205.0
BYD3_k127_3015891_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000803 143.0
BYD3_k127_3036114_0 oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor K00311 GO:0003674,GO:0003824,GO:0004174,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016645,GO:0016649,GO:0016722,GO:0017133,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032592,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043783,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045251,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070013,GO:0098573,GO:0098798,GO:1902494,GO:1990204 1.5.5.1 9.61e-215 682.0
BYD3_k127_3036114_1 Aminotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 576.0
BYD3_k127_3036114_2 Electron transfer flavoprotein domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 405.0
BYD3_k127_3036114_3 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 319.0
BYD3_k127_3036114_4 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 313.0
BYD3_k127_3036114_5 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000002273 106.0
BYD3_k127_3036114_6 Bacterial Ig-like domain 2 - - - 0.0000000000005085 81.0
BYD3_k127_3161157_0 Aromatic amino acid lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 512.0
BYD3_k127_3161157_1 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.00000000000000000000000000000000000000000001672 174.0
BYD3_k127_3161157_2 Tetratricopeptide repeat - - - 0.00000000000000000000006101 115.0
BYD3_k127_3161157_3 cellulase activity K06882 - - 0.00000000008688 73.0
BYD3_k127_31960_0 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 478.0
BYD3_k127_31960_1 nucleotide catabolic process K01081,K11751,K17224 - 3.1.3.5,3.6.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009431 464.0
BYD3_k127_31960_10 Putative stress-induced transcription regulator - - - 0.00000000008601 69.0
BYD3_k127_31960_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008775 339.0
BYD3_k127_31960_3 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 325.0
BYD3_k127_31960_4 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001918 283.0
BYD3_k127_31960_5 GGDEF domain - - - 0.0000000000000000000000000000000000001062 158.0
BYD3_k127_31960_6 HD domain - - - 0.0000000000000000000000000000000001341 141.0
BYD3_k127_31960_7 Cold shock K03704 - - 0.0000000000000000000000000000009147 124.0
BYD3_k127_31960_8 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.0000000000000000000000000004311 121.0
BYD3_k127_31960_9 Belongs to the peptidase M50B family - - - 0.00000000000000000000002867 102.0
BYD3_k127_3262735_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009758 451.0
BYD3_k127_3262735_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 402.0
BYD3_k127_3262735_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 387.0
BYD3_k127_3262735_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 376.0
BYD3_k127_3262735_4 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 325.0
BYD3_k127_3262735_5 DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000001554 255.0
BYD3_k127_3262735_6 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000006245 184.0
BYD3_k127_3262735_7 Capsule assembly protein Wzi - - - 0.0000000000356 76.0
BYD3_k127_3271112_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0 3480.0
BYD3_k127_3271112_1 Aldehyde dehydrogenase family K00138 - - 2.321e-274 850.0
BYD3_k127_3271112_2 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005524 419.0
BYD3_k127_3271112_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 396.0
BYD3_k127_3271112_4 PFAM YbaK prolyl-tRNA synthetase associated region K19055 - - 0.000000000000000000000000000000000000000000000000003136 193.0
BYD3_k127_3271112_5 HEAT repeat - - - 0.00003177 57.0
BYD3_k127_3271112_6 Type IV pilus biogenesis stability protein PilW K00575,K02453,K20543 - 2.1.1.80 0.0005392 52.0
BYD3_k127_3302743_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 4.165e-217 689.0
BYD3_k127_3302743_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 GO:0000287,GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0008976,GO:0009267,GO:0009405,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0015968,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019538,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0036293,GO:0040007,GO:0042594,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044464,GO:0046777,GO:0046872,GO:0050896,GO:0051704,GO:0051716,GO:0070482,GO:0071496,GO:0071704,GO:0071944,GO:1901564 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007899 566.0
BYD3_k127_3302743_10 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 379.0
BYD3_k127_3302743_11 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 346.0
BYD3_k127_3302743_12 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 307.0
BYD3_k127_3302743_13 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K06898,K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 306.0
BYD3_k127_3302743_14 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000000000000000000000000000000000000004259 239.0
BYD3_k127_3302743_15 SdiA-regulated - - - 0.000000000000000000000000000000000000000000000102 181.0
BYD3_k127_3302743_16 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000001924 177.0
BYD3_k127_3302743_17 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000000000006989 164.0
BYD3_k127_3302743_18 chaperone-mediated protein folding K02660 - - 0.0000000000000000338 95.0
BYD3_k127_3302743_2 Phenylalanine-4-hydroxylase K00500 GO:0003674,GO:0003824,GO:0004497,GO:0004505,GO:0006082,GO:0006520,GO:0006558,GO:0006559,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016705,GO:0016714,GO:0017144,GO:0019439,GO:0019752,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902221,GO:1902222 1.14.16.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 485.0
BYD3_k127_3302743_3 MviN-like protein K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 492.0
BYD3_k127_3302743_4 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 488.0
BYD3_k127_3302743_5 Protein of unknown function (DUF512) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 450.0
BYD3_k127_3302743_6 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 438.0
BYD3_k127_3302743_7 Formamidopyrimidine-DNA glycosylase N-terminal domain K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 413.0
BYD3_k127_3302743_8 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 408.0
BYD3_k127_3302743_9 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K04618 - 1.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008975 394.0
BYD3_k127_3307148_0 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008476 372.0
BYD3_k127_3307148_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0000000000000000000000000000000000000000000000000000000000000000000002427 242.0
BYD3_k127_3307148_2 SET domain K07117 - - 0.00000000000000000000000000000000001617 143.0
BYD3_k127_3307148_3 Lysin motif - - - 0.00000000000000000163 88.0
BYD3_k127_3307148_4 - - - - 0.000000000004222 74.0
BYD3_k127_3307148_5 EVE domain - - - 0.00000001411 56.0
BYD3_k127_3323_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006571 489.0
BYD3_k127_3323_1 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 390.0
BYD3_k127_3323_2 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 300.0
BYD3_k127_3323_3 response to UV K13281 - - 0.0000000000000000000000000000000000000000000000000000000000000222 217.0
BYD3_k127_3323_4 Protein of unknown function (DUF3455) - - - 0.0000000000000000000418 101.0
BYD3_k127_3323_5 Glycogen debranching enzyme K05989 - 3.2.1.40 0.00000000000000004328 85.0
BYD3_k127_3323_6 metallopeptidase activity - - - 0.0000007324 60.0
BYD3_k127_3323686_0 Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009237 519.0
BYD3_k127_3323686_1 Beta-eliminating lyase K00639,K00652 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 498.0
BYD3_k127_3323686_10 Amidohydrolase family - - - 0.0000000000000000000000000000000000000001271 169.0
BYD3_k127_3323686_11 phosphatidate phosphatase activity K00901,K01096,K19302 - 2.7.1.107,3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.0000000000000000000000000000000000006124 151.0
BYD3_k127_3323686_12 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000002866 151.0
BYD3_k127_3323686_13 Copper binding proteins, plastocyanin/azurin family K02638 - - 0.00000000000000000000000000000000001426 143.0
BYD3_k127_3323686_14 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000002063 139.0
BYD3_k127_3323686_15 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.0000000000000000000000000000004281 126.0
BYD3_k127_3323686_16 Sulphur oxidation protein SoxZ K17227 - - 0.0000000000000000006059 97.0
BYD3_k127_3323686_17 Sulfur oxidation protein SoxY K17226 - - 0.000000000000000001461 95.0
BYD3_k127_3323686_18 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.00000001928 65.0
BYD3_k127_3323686_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 482.0
BYD3_k127_3323686_3 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007007 436.0
BYD3_k127_3323686_4 Coproporphyrinogen III oxidase K00228 - 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007866 426.0
BYD3_k127_3323686_5 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000549 377.0
BYD3_k127_3323686_6 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009884 342.0
BYD3_k127_3323686_7 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000001449 268.0
BYD3_k127_3323686_8 NmrA-like family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000001705 221.0
BYD3_k127_3323686_9 PFAM Rhodanese domain protein K01011 GO:0005575,GO:0005623,GO:0042597,GO:0044464 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000389 193.0
BYD3_k127_3332588_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 1.067e-200 670.0
BYD3_k127_3332588_1 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 1.303e-198 644.0
BYD3_k127_3332588_10 Biopolymer transport protein ExbD/TolR K03560 - - 0.00000000000000000000000000000000008629 138.0
BYD3_k127_3332588_11 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K00999 GO:0003674,GO:0003824,GO:0003881,GO:0003882,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0030312,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.11,2.7.8.5 0.0000000000000000000000000000000002818 141.0
BYD3_k127_3332588_12 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000000000000000000000009789 126.0
BYD3_k127_3332588_13 BadF BadG BcrA BcrD - - - 0.000000000000000000000000000002253 139.0
BYD3_k127_3332588_14 - - - - 0.00000000008708 74.0
BYD3_k127_3332588_2 PFAM Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007706 498.0
BYD3_k127_3332588_3 Sodium:solute symporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 426.0
BYD3_k127_3332588_4 Glycosyl hydrolase family 3 C-terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007669 439.0
BYD3_k127_3332588_5 MotA/TolQ/ExbB proton channel family K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008873 328.0
BYD3_k127_3332588_6 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007761 314.0
BYD3_k127_3332588_7 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000000000000000000000000000000001333 185.0
BYD3_k127_3332588_8 Iron-sulphur cluster biosynthesis - - - 0.000000000000000000000000000000000000000003576 158.0
BYD3_k127_3332588_9 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000007665 151.0
BYD3_k127_3352949_0 tail specific protease K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 472.0
BYD3_k127_3352949_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 428.0
BYD3_k127_3352949_2 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001395 250.0
BYD3_k127_3352949_3 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000008106 230.0
BYD3_k127_3352949_4 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.000000000000000000000000000000000000000000000000000000000000389 218.0
BYD3_k127_3352949_5 Methyltransferase small domain K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000001764 173.0
BYD3_k127_3352949_6 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000004225 163.0
BYD3_k127_3352949_7 Binds the 23S rRNA K02909 - - 0.00000000000000000000003887 100.0
BYD3_k127_3352949_8 Control of competence regulator ComK, YlbF/YmcA - - - 0.00000000000000005221 90.0
BYD3_k127_3352949_9 curli production assembly transport component CsgG - - - 0.0000001259 62.0
BYD3_k127_3550574_0 Sodium:solute symporter family K14393 - - 4.786e-209 663.0
BYD3_k127_3550574_1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00479 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005317 465.0
BYD3_k127_3550574_2 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 455.0
BYD3_k127_3550574_3 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 398.0
BYD3_k127_3550574_4 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000000007715 146.0
BYD3_k127_3550574_5 Protein of unknown function, DUF485 - - - 0.000000000000000001466 100.0
BYD3_k127_3581743_0 Transport of potassium into the cell K03549 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 401.0
BYD3_k127_3581743_1 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006373 404.0
BYD3_k127_3581743_10 Bor protein - - - 0.000006045 59.0
BYD3_k127_3581743_2 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006621 367.0
BYD3_k127_3581743_3 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008418 320.0
BYD3_k127_3581743_4 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009704 282.0
BYD3_k127_3581743_6 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.0000000000000000000000000000000000000000000000000000008524 202.0
BYD3_k127_3581743_7 SnoaL-like domain - - - 0.0000000000000000002864 96.0
BYD3_k127_3581743_8 DoxX-like family K15977 - - 0.00000000000000007723 85.0
BYD3_k127_3581743_9 - - - - 0.00000000000001324 88.0
BYD3_k127_3592265_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 526.0
BYD3_k127_3592265_1 Elongator protein 3, MiaB family, Radical SAM K18285 - 2.5.1.120 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008908 513.0
BYD3_k127_3592265_10 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.000000000000000000000000000000000000000000000005921 179.0
BYD3_k127_3592265_11 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000007121 163.0
BYD3_k127_3592265_12 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000002408 115.0
BYD3_k127_3592265_13 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000004383 110.0
BYD3_k127_3592265_14 Ribosomal L32p protein family K02911 - - 0.000000000000001198 78.0
BYD3_k127_3592265_15 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000005705 70.0
BYD3_k127_3592265_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 491.0
BYD3_k127_3592265_3 Phage integrase, N-terminal SAM-like domain K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 406.0
BYD3_k127_3592265_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 390.0
BYD3_k127_3592265_5 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 335.0
BYD3_k127_3592265_6 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 301.0
BYD3_k127_3592265_7 Acyl transferase domain K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 312.0
BYD3_k127_3592265_8 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004734 299.0
BYD3_k127_3592265_9 NDK K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000007506 187.0
BYD3_k127_3594364_0 NAD synthase K01916 - 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 580.0
BYD3_k127_3594364_1 Thioesterase superfamily - - - 0.0000000000000000000000000000001557 133.0
BYD3_k127_3594364_2 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000000000003622 109.0
BYD3_k127_3594364_3 cyclic nucleotide-binding K07001 - - 0.00000000006451 74.0
BYD3_k127_3594364_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000003254 62.0
BYD3_k127_3631374_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.0 1315.0
BYD3_k127_3631374_1 COG0433 Predicted ATPase K06915 - - 7.024e-249 785.0
BYD3_k127_3631374_10 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003899 255.0
BYD3_k127_3631374_11 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000000000002187 195.0
BYD3_k127_3631374_12 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000003702 185.0
BYD3_k127_3631374_13 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000001731 175.0
BYD3_k127_3631374_14 Biotin/lipoate A/B protein ligase family K03800 - 6.3.1.20 0.00000000000000000000000000000000000002633 156.0
BYD3_k127_3631374_15 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000000000000000000004333 153.0
BYD3_k127_3631374_16 COGs COG2380 conserved - - - 0.000000000000000000000000000000001519 143.0
BYD3_k127_3631374_18 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000005144 83.0
BYD3_k127_3631374_2 AAA domain K03546 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 541.0
BYD3_k127_3631374_3 Calcineurin-like phosphoesterase superfamily domain K03547 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007281 388.0
BYD3_k127_3631374_4 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 316.0
BYD3_k127_3631374_5 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 294.0
BYD3_k127_3631374_6 Thymidine kinase K00857 - 2.7.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000388 281.0
BYD3_k127_3631374_7 PFAM aminotransferase, class I K00812,K10907 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001977 287.0
BYD3_k127_3631374_8 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001811 267.0
BYD3_k127_3631374_9 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003445 265.0
BYD3_k127_3632972_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 505.0
BYD3_k127_3632972_1 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 467.0
BYD3_k127_3632972_2 transport, permease protein K01992,K18233 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 408.0
BYD3_k127_3632972_3 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 376.0
BYD3_k127_3632972_4 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 362.0
BYD3_k127_3632972_5 Protein of unknown function DUF99 K09120 - - 0.00000000000000000000000000000000000000000000000000000000000000005066 227.0
BYD3_k127_3632972_6 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000002282 130.0
BYD3_k127_3668054_0 B12 binding domain K00548 - 2.1.1.13 0.0 1781.0
BYD3_k127_3668054_1 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 1.907e-222 730.0
BYD3_k127_3668054_10 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000001377 245.0
BYD3_k127_3668054_11 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000535 238.0
BYD3_k127_3668054_12 - - - - 0.000000000000000000000000000000000000000000000000001366 200.0
BYD3_k127_3668054_13 FR47-like protein - - - 0.00000000000000000000000000000000000000000487 163.0
BYD3_k127_3668054_14 pilus organization K07004 - - 0.000000000000000000000000000000000000005968 160.0
BYD3_k127_3668054_15 SMART protein phosphatase 2C domain protein - - - 0.000000000000000000000000000000000000268 159.0
BYD3_k127_3668054_16 GAF domain-containing protein K08968 - 1.8.4.14 0.000000000000000000000000000001764 126.0
BYD3_k127_3668054_17 YGGT family K02221 - - 0.000000000000000000009366 96.0
BYD3_k127_3668054_18 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00000000000000000002579 106.0
BYD3_k127_3668054_19 Belongs to the UPF0235 family K09131 - - 0.000000000000000000159 96.0
BYD3_k127_3668054_2 oligopeptide transporter, OPT family - - - 2.152e-204 660.0
BYD3_k127_3668054_20 - - - - 0.00000000000000003513 88.0
BYD3_k127_3668054_21 - - - - 0.000000000000002508 77.0
BYD3_k127_3668054_22 transcriptional regulator, TrmB - - - 0.0000029 61.0
BYD3_k127_3668054_3 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007224 516.0
BYD3_k127_3668054_4 DNA polymerase K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005861 450.0
BYD3_k127_3668054_5 PFAM peptidase M18 aminopeptidase I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 436.0
BYD3_k127_3668054_6 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 390.0
BYD3_k127_3668054_7 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004975 340.0
BYD3_k127_3668054_8 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 338.0
BYD3_k127_3668054_9 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000005947 291.0
BYD3_k127_3672042_0 PFAM DAHP synthetase I KDSA K03856,K04518,K14170 GO:0003674,GO:0003824,GO:0004106,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 2.5.1.54,4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006631 451.0
BYD3_k127_3672042_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 427.0
BYD3_k127_3672042_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000001062 151.0
BYD3_k127_3672042_11 - - - - 0.0000000000000000000000000000000001228 148.0
BYD3_k127_3672042_12 Transglycosylase associated protein - - - 0.0000000000000000000000000000004249 125.0
BYD3_k127_3672042_13 PDZ domain - - - 0.0000000000000000000000005664 115.0
BYD3_k127_3672042_14 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000021 99.0
BYD3_k127_3672042_15 Protein of unknown function (DUF3187) - - - 0.000000004109 68.0
BYD3_k127_3672042_16 - - - - 0.0000002969 55.0
BYD3_k127_3672042_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 398.0
BYD3_k127_3672042_3 cellular manganese ion homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 355.0
BYD3_k127_3672042_4 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 344.0
BYD3_k127_3672042_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 318.0
BYD3_k127_3672042_6 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide - - - 0.000000000000000000000000000000000000000000000000000000000000017 223.0
BYD3_k127_3672042_7 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000005833 227.0
BYD3_k127_3672042_8 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000001277 211.0
BYD3_k127_3672042_9 response to UV K13281 - - 0.0000000000000000000000000000000000000000000000001022 183.0
BYD3_k127_3679559_0 FAD dependent oxidoreductase - - - 5.411e-244 774.0
BYD3_k127_3679559_1 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 368.0
BYD3_k127_372914_0 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 307.0
BYD3_k127_372914_1 TupA-like ATPgrasp - - - 0.0000000000000000000000000000000000000000000000005418 189.0
BYD3_k127_372914_2 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000001171 52.0
BYD3_k127_3782797_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 1.144e-298 949.0
BYD3_k127_3782797_1 Domain in cystathionine beta-synthase and other proteins. K01697 - 4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 566.0
BYD3_k127_3782797_2 Glyoxalase bleomycin resistance protein dioxygenase K06991 - - 0.0000000000000000000000000000000000000007367 154.0
BYD3_k127_3782797_3 - - - - 0.00000000000000000000000000001014 119.0
BYD3_k127_3782797_4 COG0810 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.0000000008398 70.0
BYD3_k127_3795995_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 6.44e-200 634.0
BYD3_k127_3795995_1 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007217 563.0
BYD3_k127_3795995_10 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000002932 107.0
BYD3_k127_3795995_11 molybdopterin-guanine dinucleotide biosynthesis protein K03753 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000003249 104.0
BYD3_k127_3795995_12 - - - - 0.00000000000000000135 91.0
BYD3_k127_3795995_13 - - - - 0.0000000000000000341 96.0
BYD3_k127_3795995_2 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 500.0
BYD3_k127_3795995_3 Peptidase family M48 K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005315 334.0
BYD3_k127_3795995_4 PFAM Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 326.0
BYD3_k127_3795995_5 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004505 336.0
BYD3_k127_3795995_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 317.0
BYD3_k127_3795995_7 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000003968 173.0
BYD3_k127_3795995_8 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000003738 124.0
BYD3_k127_3795995_9 synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000001788 116.0
BYD3_k127_3809788_0 - - GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008757,GO:0016278,GO:0016740,GO:0016741,GO:0032259 - 3.399e-287 952.0
BYD3_k127_3809788_1 ABC transporter transmembrane region - - - 1.714e-211 673.0
BYD3_k127_3809788_2 PFAM amino acid permease-associated region K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006619 412.0
BYD3_k127_3809788_3 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 406.0
BYD3_k127_3809788_4 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007123 408.0
BYD3_k127_3809788_5 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 399.0
BYD3_k127_3809788_6 Predicted permease YjgP/YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 318.0
BYD3_k127_3809788_7 Predicted permease YjgP/YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007714 297.0
BYD3_k127_3809788_8 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000004433 198.0
BYD3_k127_3905069_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 1.923e-319 1019.0
BYD3_k127_3905069_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 3.181e-255 805.0
BYD3_k127_3905069_10 PFAM Rhodanese-like domain - - - 0.00000000000000000000000000000000000000001267 162.0
BYD3_k127_3905069_11 endonuclease activity - - - 0.000000000000000000000000000003073 134.0
BYD3_k127_3905069_12 DoxX K15977 - - 0.000000000000000000000001036 109.0
BYD3_k127_3905069_13 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.0000000000000001724 83.0
BYD3_k127_3905069_14 Domain of unknown function (DUF4440) - - - 0.0000000000000006027 85.0
BYD3_k127_3905069_15 Halocyanin domain protein - - - 0.000000000000001175 85.0
BYD3_k127_3905069_16 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000000002207 79.0
BYD3_k127_3905069_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 4.214e-213 675.0
BYD3_k127_3905069_3 Peptidase, M61 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 593.0
BYD3_k127_3905069_4 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 467.0
BYD3_k127_3905069_5 Sodium:dicarboxylate symporter family K11102 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006992 462.0
BYD3_k127_3905069_6 FRG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007099 341.0
BYD3_k127_3905069_7 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 354.0
BYD3_k127_3905069_8 tRNA synthetases class I (E and Q), catalytic domain K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 306.0
BYD3_k127_3905069_9 SMART PDZ DHR GLGF domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000007845 256.0
BYD3_k127_3906993_0 Response regulator receiver - - - 0.0 1074.0
BYD3_k127_3906993_1 TrkA-C domain K11105 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 530.0
BYD3_k127_3906993_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005275 511.0
BYD3_k127_3906993_3 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007688 410.0
BYD3_k127_3906993_4 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002902 273.0
BYD3_k127_3906993_5 Leishmanolysin - - - 0.0000000000000000000000000000000000000000000000000000000002067 233.0
BYD3_k127_3908957_0 Atp-dependent helicase - - - 8.455e-315 988.0
BYD3_k127_3908957_1 - - - - 0.0000000000000000001157 104.0
BYD3_k127_3908957_2 PAS modulated sigma54 specific transcriptional regulator, Fis family - - - 0.00001245 54.0
BYD3_k127_3912487_0 protein kinase activity - - - 9.016e-196 644.0
BYD3_k127_3912487_1 PA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008094 453.0
BYD3_k127_3912487_2 PFAM CBS domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000677 377.0
BYD3_k127_3912487_3 amino acid K03294,K20265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 340.0
BYD3_k127_3912487_4 Amidinotransferase K01482 - 3.5.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000002009 273.0
BYD3_k127_3933114_0 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 492.0
BYD3_k127_3933114_1 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 499.0
BYD3_k127_3933114_2 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 396.0
BYD3_k127_3933114_3 Galactose oxidase, central domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 320.0
BYD3_k127_3933114_4 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000002164 271.0
BYD3_k127_3933114_5 Protein of unknown function (DUF456) K09793 - - 0.0000000000000000000000000000004607 129.0
BYD3_k127_3948351_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1582.0
BYD3_k127_3948351_1 UDP binding domain K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007567 559.0
BYD3_k127_3948351_10 TPR repeat - - - 0.0000000000000000000000001004 116.0
BYD3_k127_3948351_11 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.00000000000000006648 85.0
BYD3_k127_3948351_2 UDP binding domain K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004145 569.0
BYD3_k127_3948351_3 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005958 493.0
BYD3_k127_3948351_4 RmlD substrate binding domain K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 295.0
BYD3_k127_3948351_5 O-acyltransferase activity K13018 - 2.3.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006963 273.0
BYD3_k127_3948351_6 cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000006768 228.0
BYD3_k127_3948351_7 RmlD substrate binding domain K15856 - 1.1.1.281 0.000000000000000000000000000000000000000000000000000000000003981 224.0
BYD3_k127_3948351_8 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000005476 200.0
BYD3_k127_3948351_9 Outer membrane lipoprotein K05807 - - 0.00000000000000000000000000000000000000001007 170.0
BYD3_k127_3956779_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 499.0
BYD3_k127_3956779_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 332.0
BYD3_k127_3956779_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000109 207.0
BYD3_k127_3956779_3 - - - - 0.0000000000000000001411 104.0
BYD3_k127_3965991_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 572.0
BYD3_k127_3965991_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 548.0
BYD3_k127_3965991_10 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000001574 196.0
BYD3_k127_3965991_11 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000004115 152.0
BYD3_k127_3965991_12 Rhomboid family K09650 - 3.4.21.105 0.0000000000000000000000000000000007443 141.0
BYD3_k127_3965991_13 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000000004652 125.0
BYD3_k127_3965991_14 Ribosomal protein L34 K02914 - - 0.0000000000000001738 85.0
BYD3_k127_3965991_16 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000003287 64.0
BYD3_k127_3965991_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 511.0
BYD3_k127_3965991_3 Peptidase family S58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007458 429.0
BYD3_k127_3965991_4 Zn-dependent protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 375.0
BYD3_k127_3965991_5 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 358.0
BYD3_k127_3965991_6 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009902 348.0
BYD3_k127_3965991_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 342.0
BYD3_k127_3965991_8 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005139 341.0
BYD3_k127_3965991_9 peptidase M24B X-Pro dipeptidase aminopeptidase domain protein K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000005122 243.0
BYD3_k127_3995245_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008468 489.0
BYD3_k127_3995245_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 347.0
BYD3_k127_3995245_2 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000009522 185.0
BYD3_k127_3995245_3 Protein of unknown function (DUF962) - - - 0.000000000000000000000000000000000000000004788 156.0
BYD3_k127_3995245_4 - - - - 0.0000000000000000000006731 112.0
BYD3_k127_3995245_5 Glycogen recognition site of AMP-activated protein kinase - - - 0.000000000000000000000825 101.0
BYD3_k127_3995245_6 - - - - 0.00000000000000000004227 97.0
BYD3_k127_3995245_7 Domain of unknown function (DUF4382) - - - 0.00001084 52.0
BYD3_k127_3999382_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000833 473.0
BYD3_k127_3999382_1 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 425.0
BYD3_k127_3999382_2 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000001367 254.0
BYD3_k127_3999382_3 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000004045 181.0
BYD3_k127_3999382_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000003738 157.0
BYD3_k127_3999382_5 polysaccharide deacetylase - - - 0.000000000000000218 90.0
BYD3_k127_3999382_6 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000008918 61.0
BYD3_k127_4046124_0 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 441.0
BYD3_k127_4046124_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 351.0
BYD3_k127_4046124_2 Lytic transglycosylase catalytic K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003406 298.0
BYD3_k127_4046124_3 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000003723 227.0
BYD3_k127_4046124_4 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000006248 174.0
BYD3_k127_4046124_5 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000004346 136.0
BYD3_k127_4046124_6 Aldehyde dehydrogenase family K00138 - - 0.000000000000000000000000000000002216 134.0
BYD3_k127_4046124_7 Transglycosylase SLT domain - - - 0.00000000000000000000000000000247 129.0
BYD3_k127_4046124_8 Uncharacterized protein conserved in bacteria (DUF2064) - - - 0.0000000000000000000000000002022 124.0
BYD3_k127_4046124_9 - - - - 0.00000000003045 69.0
BYD3_k127_4056278_0 Domain of unknown function DUF87 K06915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 426.0
BYD3_k127_4056278_1 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 331.0
BYD3_k127_4056278_2 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 329.0
BYD3_k127_4056278_3 4Fe-4S single cluster domain K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004677 262.0
BYD3_k127_4076008_0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 3.968e-202 643.0
BYD3_k127_4076008_1 Bacillithiol biosynthesis BshC K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000002971 242.0
BYD3_k127_4076008_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000004374 214.0
BYD3_k127_4076008_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000003006 211.0
BYD3_k127_4076008_4 Tellurite resistance protein TehB - - - 0.0000000000000000000000000000000000000000000001221 176.0
BYD3_k127_4076008_5 Domain of unknown function (DUF374) K09778 - - 0.0000000000000000000000000000000000000000004418 166.0
BYD3_k127_4076008_6 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000001674 125.0
BYD3_k127_4096282_0 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 344.0
BYD3_k127_4096282_1 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003342 263.0
BYD3_k127_4096282_2 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000001236 113.0
BYD3_k127_4230453_0 DALR_2 K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 454.0
BYD3_k127_4230453_1 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004829 403.0
BYD3_k127_4230453_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000892 295.0
BYD3_k127_4230453_3 mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006731 248.0
BYD3_k127_4230453_5 PspA/IM30 family K03969 - - 0.0002323 46.0
BYD3_k127_4238745_0 Heavy-metal-associated domain K01533,K17686 - 3.6.3.4,3.6.3.54 7.132e-251 795.0
BYD3_k127_4238745_1 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004226 495.0
BYD3_k127_4238745_10 transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000003413 232.0
BYD3_k127_4238745_11 Domain of unknown function (DUF4112) - - - 0.000000000000000000000000000000000005839 142.0
BYD3_k127_4238745_12 ABC transporter K02056 - 3.6.3.17 0.000000000000000000000000000000002998 134.0
BYD3_k127_4238745_13 hydrolase activity, acting on ester bonds K01259 - 3.4.11.5 0.000000000000000000000000000001786 133.0
BYD3_k127_4238745_14 negative regulation of transcription, DNA-templated K21600 - - 0.000000000000000000000000000007076 138.0
BYD3_k127_4238745_15 COG2010 Cytochrome c, mono- and diheme variants - - - 0.0000000000000000000000000005352 129.0
BYD3_k127_4238745_16 DinB family - - - 0.000000000000000000000000004707 117.0
BYD3_k127_4238745_17 - - - - 0.000000000000000000000000005583 115.0
BYD3_k127_4238745_18 Glyoxalase-like domain - - - 0.0000000000000000000002637 103.0
BYD3_k127_4238745_19 Putative lumazine-binding - - - 0.000000000000000000001839 101.0
BYD3_k127_4238745_2 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 501.0
BYD3_k127_4238745_20 Protein of unknown function (DUF2905) - - - 0.000000000000001678 83.0
BYD3_k127_4238745_21 Heavy-metal-associated domain K07213 - - 0.0000000000007549 70.0
BYD3_k127_4238745_3 permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 329.0
BYD3_k127_4238745_4 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 317.0
BYD3_k127_4238745_5 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007436 299.0
BYD3_k127_4238745_6 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008809 299.0
BYD3_k127_4238745_7 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000005374 263.0
BYD3_k127_4238745_8 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000003352 266.0
BYD3_k127_4238745_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000009835 235.0
BYD3_k127_4247730_0 Phospholipase D Transphosphatidylase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 602.0
BYD3_k127_4247730_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 294.0
BYD3_k127_4247730_2 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004348 257.0
BYD3_k127_4247730_3 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000000000001535 209.0
BYD3_k127_4247730_4 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000009587 190.0
BYD3_k127_4247730_5 Alpha beta hydrolase - - - 0.0000000000000000000000000000000001559 134.0
BYD3_k127_4247730_6 Protein of unknown function (DUF983) - - - 0.000000000000000000000000003458 124.0
BYD3_k127_4247730_7 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0008381 44.0
BYD3_k127_4254289_0 Thiamine pyrophosphate protein TPP binding domain protein K01652 - 2.2.1.6 5.077e-217 687.0
BYD3_k127_4254289_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 6.657e-205 670.0
BYD3_k127_4254289_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004455,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0022607,GO:0036094,GO:0042802,GO:0043167,GO:0043169,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0048037,GO:0050661,GO:0050662,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 443.0
BYD3_k127_4254289_3 Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.0000000000000000000000003877 116.0
BYD3_k127_4254289_4 3-isopropylmalate dehydratase small subunit K01704 - 4.2.1.33,4.2.1.35 0.0000000007581 60.0
BYD3_k127_4311994_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1189.0
BYD3_k127_4311994_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 4.361e-227 716.0
BYD3_k127_4311994_10 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 335.0
BYD3_k127_4311994_11 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595 332.0
BYD3_k127_4311994_12 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 302.0
BYD3_k127_4311994_13 ABC transporter K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002831 262.0
BYD3_k127_4311994_14 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003247 271.0
BYD3_k127_4311994_15 Part of the ABC transporter FtsEX involved in K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000423 271.0
BYD3_k127_4311994_16 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001069 250.0
BYD3_k127_4311994_17 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000211 230.0
BYD3_k127_4311994_18 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000001117 156.0
BYD3_k127_4311994_19 Protein of unknown function, DUF - - - 0.000000000000000000000000000000000000004254 151.0
BYD3_k127_4311994_2 ABC transporter transmembrane region K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005243 628.0
BYD3_k127_4311994_20 Ferritin Dps family protein K03594 - 1.16.3.1 0.000000000000000000000000000000000003569 144.0
BYD3_k127_4311994_21 - - - - 0.000000000000000000000003936 111.0
BYD3_k127_4311994_22 integral membrane protein K07027 - - 0.000000000000000002172 97.0
BYD3_k127_4311994_23 COG1716 FOG FHA domain - - - 0.000000000000003535 89.0
BYD3_k127_4311994_24 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000005711 59.0
BYD3_k127_4311994_25 Zn-dependent protease - - - 0.0001863 52.0
BYD3_k127_4311994_3 pyridoxal-dependent decarboxylase K01580 - 4.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 596.0
BYD3_k127_4311994_4 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 467.0
BYD3_k127_4311994_5 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 461.0
BYD3_k127_4311994_6 Rhodanese Homology Domain K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 448.0
BYD3_k127_4311994_7 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009262 388.0
BYD3_k127_4311994_8 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 357.0
BYD3_k127_4311994_9 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 338.0
BYD3_k127_4320364_0 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009428 470.0
BYD3_k127_4320364_1 amino acid K03294,K19540 GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006040,GO:0006082,GO:0006520,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009056,GO:0009063,GO:0009987,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0016054,GO:0019752,GO:0022804,GO:0022857,GO:0030389,GO:0030392,GO:0030393,GO:0031224,GO:0031226,GO:0034220,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044425,GO:0044459,GO:0044464,GO:0046348,GO:0046395,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0098656,GO:1901135,GO:1901136,GO:1901281,GO:1901564,GO:1901565,GO:1901575,GO:1902475,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007948 468.0
BYD3_k127_4320364_2 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 404.0
BYD3_k127_4320364_3 Sugar (and other) transporter K08153 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 362.0
BYD3_k127_4320364_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 326.0
BYD3_k127_4320364_5 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000001976 206.0
BYD3_k127_4320364_6 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000508 199.0
BYD3_k127_4336437_0 N-terminal domain of (some) glycogen debranching enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006627 630.0
BYD3_k127_4336437_1 Sodium/hydrogen exchanger family K03316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 585.0
BYD3_k127_4336437_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 317.0
BYD3_k127_4336437_3 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000642 227.0
BYD3_k127_4385628_0 Glutamine synthetase, beta-Grasp domain K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007334 608.0
BYD3_k127_4385628_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 367.0
BYD3_k127_4385628_2 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001379 246.0
BYD3_k127_4385628_3 Belongs to the HAD-like hydrolase superfamily K02566 - - 0.0000000000000000000000000000000000000000000001718 193.0
BYD3_k127_4385628_4 - - - - 0.0000000000000000000000000006427 126.0
BYD3_k127_4385628_5 membrane organization - - - 0.000000000000000000000000001003 130.0
BYD3_k127_4385628_6 Protein of unknown function (DUF3108) - - - 0.00000000000000000000002955 113.0
BYD3_k127_4458991_0 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 399.0
BYD3_k127_4458991_1 arylsulfatase A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005203 359.0
BYD3_k127_4458991_2 Domain of unknown function (DUF4389) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008163 265.0
BYD3_k127_4458991_3 TspO/MBR family K05770 - - 0.0000000000000000000000000000000000000000101 158.0
BYD3_k127_4458991_4 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000003512 146.0
BYD3_k127_4458991_5 - - - - 0.00000000000000000000000002624 119.0
BYD3_k127_4458991_6 Protein of unknown function (DUF3011) - - - 0.0000000000000000000000008386 119.0
BYD3_k127_4458991_7 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000003526 113.0
BYD3_k127_4458991_8 cell wall surface anchor family protein - - - 0.0007163 51.0
BYD3_k127_4470885_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 534.0
BYD3_k127_4470885_1 ABC transporter K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009218 394.0
BYD3_k127_4470885_2 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 381.0
BYD3_k127_4470885_3 TIGRFAM SUF system FeS K04488 - - 0.0000000000000000000000000000000000000000000000004141 179.0
BYD3_k127_4470885_4 Belongs to the UPF0403 family - - - 0.000000000000000000000000000000000000000000000001225 178.0
BYD3_k127_462694_0 NADH oxidase - - - 4.922e-198 627.0
BYD3_k127_462694_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 346.0
BYD3_k127_462694_2 enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007665 288.0
BYD3_k127_462694_3 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000009235 199.0
BYD3_k127_462694_4 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000001807 200.0
BYD3_k127_462694_5 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000009676 115.0
BYD3_k127_4743679_0 Anion-transporting ATPase K01551 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006897 332.0
BYD3_k127_4743679_1 Protein of unknown function (DUF3616) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001017 278.0
BYD3_k127_4743679_2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000884 179.0
BYD3_k127_4743679_3 acr, cog1993 K09137 - - 0.00000000000000000000000000000000000000000007729 163.0
BYD3_k127_4743679_4 Major facilitator Superfamily - - - 0.0000000000000000000000000003151 115.0
BYD3_k127_4743679_5 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000002926 119.0
BYD3_k127_4772606_0 Bacterial regulatory protein, Fis family - - - 3.271e-218 690.0
BYD3_k127_4772606_1 OST-HTH/LOTUS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 379.0
BYD3_k127_4772606_2 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009587 348.0
BYD3_k127_4772606_3 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 330.0
BYD3_k127_4772606_4 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001495 283.0
BYD3_k127_4772606_5 Bacterial sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005062 272.0
BYD3_k127_4772606_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003026 261.0
BYD3_k127_4772606_7 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000005496 239.0
BYD3_k127_4772606_8 polysaccharide biosynthetic process - - - 0.00000000000000000000000000000001508 141.0
BYD3_k127_4772606_9 PFAM GGDEF domain containing protein K21020 - 2.7.7.65 0.00000000000000000000007959 109.0
BYD3_k127_4779917_0 FecCD transport family K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000746 237.0
BYD3_k127_4779917_1 ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000185 226.0
BYD3_k127_4779917_2 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000001945 181.0
BYD3_k127_4779917_3 Involved in DNA repair and RecF pathway recombination K03584 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000417 83.0
BYD3_k127_4868904_0 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 464.0
BYD3_k127_4868904_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 445.0
BYD3_k127_4868904_10 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000009404 203.0
BYD3_k127_4868904_11 NUDIX domain K08310 - 3.6.1.67 0.00000000000000000000000000000000000000001834 164.0
BYD3_k127_4868904_12 Periplasmic copper-binding protein (NosD) - - - 0.00000000000000000000000001733 127.0
BYD3_k127_4868904_2 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 424.0
BYD3_k127_4868904_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 370.0
BYD3_k127_4868904_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004468 286.0
BYD3_k127_4868904_5 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001179 264.0
BYD3_k127_4868904_6 Imidazoleglycerol-phosphate dehydratase K00817,K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.9,3.1.3.15,4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000005652 236.0
BYD3_k127_4868904_7 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 GO:0003674,GO:0003824,GO:0008110,GO:0008483,GO:0016740,GO:0016769 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000007605 246.0
BYD3_k127_4868904_8 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000000001983 188.0
BYD3_k127_4868904_9 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000002579 191.0
BYD3_k127_4890328_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 444.0
BYD3_k127_4890328_1 aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 328.0
BYD3_k127_4890328_2 Maltose acetyltransferase K00661 - 2.3.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000001792 246.0
BYD3_k127_4890328_3 histidine kinase A domain protein - - - 0.000000000000000001625 96.0
BYD3_k127_4890328_4 Cache domain - - - 0.00006316 52.0
BYD3_k127_4890328_5 Cro/C1-type HTH DNA-binding domain K07727 - - 0.0006993 48.0
BYD3_k127_4890451_0 Phosphoenolpyruvate carboxylase K01595 - 4.1.1.31 0.0 1112.0
BYD3_k127_4890451_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 - 6.2.1.5,6.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009537 573.0
BYD3_k127_4890451_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 - 6.2.1.5,6.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 462.0
BYD3_k127_4890451_3 D-isomer specific 2-hydroxyacid dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 426.0
BYD3_k127_4890451_4 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000002926 228.0
BYD3_k127_4890451_5 Belongs to the HpcH HpaI aldolase family K01644,K08691 - 4.1.3.24,4.1.3.25,4.1.3.34 0.0000000000000000000000000000000000000000000000000000000023 201.0
BYD3_k127_4903115_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1185.0
BYD3_k127_4903115_1 Peptidase family M3 K08602 - - 2.645e-234 736.0
BYD3_k127_4903115_10 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000001145 102.0
BYD3_k127_4903115_11 - - - - 0.00000000000006689 79.0
BYD3_k127_4903115_2 Amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 511.0
BYD3_k127_4903115_3 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 504.0
BYD3_k127_4903115_4 Binding-protein-dependent transport system inner membrane component K02011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 416.0
BYD3_k127_4903115_5 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 344.0
BYD3_k127_4903115_6 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 316.0
BYD3_k127_4903115_7 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000002405 277.0
BYD3_k127_4903115_8 - - - - 0.0000000000000000000005613 102.0
BYD3_k127_4903115_9 Predicted membrane protein (DUF2339) - - - 0.00000000000000000000367 110.0
BYD3_k127_4905634_0 Hsp70 protein K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004523 497.0
BYD3_k127_4905634_1 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 393.0
BYD3_k127_4905634_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 329.0
BYD3_k127_4905634_3 Transcriptional regulatory protein, C terminal K02483,K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004777 338.0
BYD3_k127_4905634_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007429 271.0
BYD3_k127_4905634_5 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000001478 188.0
BYD3_k127_4905634_6 Diguanylate cyclase - - - 0.000007294 54.0
BYD3_k127_4905634_7 SnoaL-like domain - - - 0.0007587 49.0
BYD3_k127_4911153_0 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009147 571.0
BYD3_k127_4911153_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006226 417.0
BYD3_k127_4911153_2 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000008424 243.0
BYD3_k127_4911153_3 Tetrapyrrole (Corrin/Porphyrin) Methylases K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000002637 244.0
BYD3_k127_4911153_4 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000001285 230.0
BYD3_k127_4911153_5 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000002181 224.0
BYD3_k127_4911153_6 Histidine kinase K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000001496 214.0
BYD3_k127_4911153_7 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000000000000001137 167.0
BYD3_k127_4911153_8 Protein of unknown function (DUF2892) - - - 0.000000003651 59.0
BYD3_k127_4914997_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 336.0
BYD3_k127_4914997_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 325.0
BYD3_k127_4914997_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003628 334.0
BYD3_k127_4914997_3 TIGRFAM phosphate ABC transporter K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009466 301.0
BYD3_k127_4914997_4 negative regulation of phosphate transmembrane transport K02039 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.0000000000000000000000000000000000000000000000000002409 192.0
BYD3_k127_4914997_5 Belongs to the PstS family K02040 - - 0.000000000000000000000000000000000000000000000000002911 186.0
BYD3_k127_4921071_0 Polysaccharide biosynthesis/export protein - - - 4.615e-244 782.0
BYD3_k127_4921071_1 CoA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 591.0
BYD3_k127_4921071_10 PFAM Glycosyl transferase family 4 K02851,K13007 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005247 283.0
BYD3_k127_4921071_11 COG0451 Nucleoside-diphosphate-sugar epimerases K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000004318 261.0
BYD3_k127_4921071_12 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000001441 250.0
BYD3_k127_4921071_13 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000009336 229.0
BYD3_k127_4921071_14 PFAM glycosyl transferase group 1 K12995 - 2.4.1.348 0.000000000000000000000000000000000000000000000000000000000002603 222.0
BYD3_k127_4921071_15 PFAM Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000223 223.0
BYD3_k127_4921071_16 Alternative locus ID K08973 - - 0.0000000000000000000000000000000000000000000000000000000003085 210.0
BYD3_k127_4921071_17 Modulates the polysaccharide chain length of enterobacterial common antigen (ECA) - - - 0.000000000000000000000000000000000000000000001594 179.0
BYD3_k127_4921071_18 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000009871 183.0
BYD3_k127_4921071_19 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000000000000000000000000000003805 155.0
BYD3_k127_4921071_2 UDP-N-acetylglucosamine 2-epimerase K08068,K18429 - 3.2.1.183,3.2.1.184 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006857 508.0
BYD3_k127_4921071_20 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000001225 134.0
BYD3_k127_4921071_21 Major Facilitator Superfamily - - - 0.00000000000000000000005145 100.0
BYD3_k127_4921071_22 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.0000000000000000009234 100.0
BYD3_k127_4921071_23 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00001895 57.0
BYD3_k127_4921071_3 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 481.0
BYD3_k127_4921071_4 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 373.0
BYD3_k127_4921071_5 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 361.0
BYD3_k127_4921071_6 CYTH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 360.0
BYD3_k127_4921071_7 PFAM polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 327.0
BYD3_k127_4921071_8 Nucleotidyl transferase K00966 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 302.0
BYD3_k127_4921071_9 transferase activity, transferring glycosyl groups K02844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001839 303.0
BYD3_k127_4971864_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 514.0
BYD3_k127_4971864_1 ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006989 500.0
BYD3_k127_4971864_10 Phosphodiester glycosidase - - - 0.00000000000000000000000000000000000000000000006978 183.0
BYD3_k127_4971864_11 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000003772 185.0
BYD3_k127_4971864_12 META domain K03929 - - 0.0000000000000000000000000000000000000002178 166.0
BYD3_k127_4971864_13 - - - - 0.0000000000000000000000000000000002203 138.0
BYD3_k127_4971864_15 COG0668 Small-conductance mechanosensitive channel - - - 0.0000000000000000000000000007041 129.0
BYD3_k127_4971864_16 Acts as a magnesium transporter K06213 - - 0.000000000000000000009868 107.0
BYD3_k127_4971864_17 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.0000000000000001257 82.0
BYD3_k127_4971864_2 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 473.0
BYD3_k127_4971864_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 428.0
BYD3_k127_4971864_4 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008574 366.0
BYD3_k127_4971864_5 helix-turn-helix- domain containing protein, AraC type K13633 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 356.0
BYD3_k127_4971864_6 Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002001 274.0
BYD3_k127_4971864_7 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000024 245.0
BYD3_k127_4971864_8 - - - - 0.00000000000000000000000000000000000000000000000000009591 205.0
BYD3_k127_4971864_9 META domain - - - 0.000000000000000000000000000000000000000000000000008325 198.0
BYD3_k127_4974686_0 Elongation factor G C-terminus K06207 - - 1.806e-279 871.0
BYD3_k127_4974686_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.305e-247 778.0
BYD3_k127_4974686_10 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001695 276.0
BYD3_k127_4974686_11 cation efflux K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006431 253.0
BYD3_k127_4974686_12 aminopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000003287 246.0
BYD3_k127_4974686_13 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000004613 244.0
BYD3_k127_4974686_14 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000002447 224.0
BYD3_k127_4974686_15 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000000005281 198.0
BYD3_k127_4974686_16 PPIC-type PPIASE domain K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000006577 199.0
BYD3_k127_4974686_17 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity K00765,K02502 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000003817 195.0
BYD3_k127_4974686_18 bacterial-type flagellum-dependent cell motility K01317 - 3.4.21.10 0.0000000000000000000000000007281 132.0
BYD3_k127_4974686_19 PFAM PEGA domain - - - 0.000002203 59.0
BYD3_k127_4974686_2 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 9.522e-236 767.0
BYD3_k127_4974686_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 419.0
BYD3_k127_4974686_4 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 392.0
BYD3_k127_4974686_5 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 388.0
BYD3_k127_4974686_6 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 360.0
BYD3_k127_4974686_7 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 312.0
BYD3_k127_4974686_8 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 314.0
BYD3_k127_4974686_9 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002356 300.0
BYD3_k127_499464_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 508.0
BYD3_k127_499464_1 asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 474.0
BYD3_k127_499464_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 323.0
BYD3_k127_499464_3 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 309.0
BYD3_k127_499464_4 Peptidase family S58 K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000007122 219.0
BYD3_k127_499464_5 Lanthionine synthetase C family protein - - - 0.0000000000000000000000000000000000000000000000003494 193.0
BYD3_k127_499464_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K00999,K08744,K17103 - 2.7.8.11,2.7.8.41,2.7.8.5,2.7.8.8 0.00000000000000000000000000000000000004201 150.0
BYD3_k127_499464_7 - - - - 0.0000000000000000000000000000000000007076 153.0
BYD3_k127_499464_8 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - - 0.00000000000000000000000000000000001141 152.0
BYD3_k127_5011653_0 Prolyl oligopeptidase family - - - 4.543e-257 809.0
BYD3_k127_5011653_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 286.0
BYD3_k127_5034675_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 2.078e-291 919.0
BYD3_k127_5034675_1 Participates in both transcription termination and antitermination K02600 - - 5.07e-197 622.0
BYD3_k127_5034675_10 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000001215 230.0
BYD3_k127_5034675_11 heme binding - - - 0.000000000000000000000000000000000000000000000000000001278 208.0
BYD3_k127_5034675_12 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177,K03483 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000001614 203.0
BYD3_k127_5034675_13 Cupin superfamily (DUF985) K09705 - - 0.00000000000000000000000000000000000000004994 169.0
BYD3_k127_5034675_14 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000000000002907 136.0
BYD3_k127_5034675_15 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.00000000000000000000000000000003554 145.0
BYD3_k127_5034675_16 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000009952 114.0
BYD3_k127_5034675_17 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family - - - 0.0000000000005042 76.0
BYD3_k127_5034675_18 Protein of unknown function (DUF503) K09764 - - 0.000000000000742 72.0
BYD3_k127_5034675_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 576.0
BYD3_k127_5034675_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 493.0
BYD3_k127_5034675_4 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 389.0
BYD3_k127_5034675_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 370.0
BYD3_k127_5034675_6 Zinc dependent phospholipase C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 349.0
BYD3_k127_5034675_7 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009397 309.0
BYD3_k127_5034675_8 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002583 284.0
BYD3_k127_5034675_9 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000268 228.0
BYD3_k127_5075328_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 468.0
BYD3_k127_5075328_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 451.0
BYD3_k127_5075328_2 Aminotransferase class-V K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 382.0
BYD3_k127_5075328_3 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 386.0
BYD3_k127_5075328_4 GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 293.0
BYD3_k127_5075328_5 extracellular polysaccharide biosynthetic process K13582 - - 0.000000000000000000000000000000000000000000000000000000000004646 219.0
BYD3_k127_5095157_0 Aminoglycoside 3-N-acetyltransferase K00662 - 2.3.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 342.0
BYD3_k127_5095157_1 PFAM amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001411 289.0
BYD3_k127_5095157_2 oxidoreductase activity K00274 - 1.4.3.4 0.0000000000000000000000000000000000000000000000000000000000001187 232.0
BYD3_k127_5095157_3 Beta-Ig-H3 fasciclin - - - 0.0000000000000000000000000000000000000000009609 159.0
BYD3_k127_5095157_4 GCN5-related N-acetyl-transferase K06975 - - 0.00000000000000000001535 94.0
BYD3_k127_5100428_0 Membrane bound O-acyl transferase, MBOAT family protein - - - 4.847e-197 624.0
BYD3_k127_5100428_1 ATP dependent DNA ligase C terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006624 529.0
BYD3_k127_5100428_2 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009744 521.0
BYD3_k127_5100428_3 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 362.0
BYD3_k127_5100428_4 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006513 299.0
BYD3_k127_5100428_5 - - - - 0.000000000000000000000000000000000000000000000000000000000005927 222.0
BYD3_k127_5100428_6 Universal stress protein family - - - 0.00000000000000000000000000000000005681 142.0
BYD3_k127_5149909_0 Enoyl-CoA hydratase/isomerase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 2.865e-212 683.0
BYD3_k127_5149909_1 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 533.0
BYD3_k127_5149909_2 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 403.0
BYD3_k127_5149909_3 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000704 396.0
BYD3_k127_5149909_4 Hydrolases of the alpha beta superfamily K06889 - - 0.00000000000000000000000000000000000000000000000000000006728 224.0
BYD3_k127_5149909_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000002299 170.0
BYD3_k127_5149909_6 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000001804 121.0
BYD3_k127_5207833_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 2.115e-194 614.0
BYD3_k127_5207833_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 349.0
BYD3_k127_5207833_2 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 312.0
BYD3_k127_5207833_3 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000001029 223.0
BYD3_k127_5207833_4 Thioredoxin-like - - - 0.0000000000000000000000000000000005572 147.0
BYD3_k127_5207833_5 AhpC TSA family - - - 0.0000000000000000000001675 106.0
BYD3_k127_5207833_6 Amidohydrolase family - - - 0.00001566 52.0
BYD3_k127_5213173_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 602.0
BYD3_k127_5213173_1 Formate dehydrogenase alpha subunit K00123,K05299 - 1.17.1.10,1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 623.0
BYD3_k127_5213173_10 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000001492 129.0
BYD3_k127_5213173_11 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.0000000000000000000000000001998 126.0
BYD3_k127_5213173_12 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000003257 92.0
BYD3_k127_5213173_14 Domain of unknown function (DUF4129) - - - 0.0000161 54.0
BYD3_k127_5213173_2 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009203 452.0
BYD3_k127_5213173_3 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 347.0
BYD3_k127_5213173_4 RDD family K06384 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 343.0
BYD3_k127_5213173_5 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 326.0
BYD3_k127_5213173_6 protein (some members contain a von Willebrand factor type A (vWA) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008215 273.0
BYD3_k127_5213173_7 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000006435 247.0
BYD3_k127_5213173_8 Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis K06208 - 5.4.99.5 0.0000000000000000000000000000000002521 141.0
BYD3_k127_5213173_9 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000006291 142.0
BYD3_k127_5294622_0 gluconolactonase K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 374.0
BYD3_k127_5294622_1 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000001848 206.0
BYD3_k127_5294622_2 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000768 147.0
BYD3_k127_5294622_3 ketosteroid isomerase - - - 0.00000000000005381 83.0
BYD3_k127_5294622_4 Cupin domain - - - 0.0000000000005978 78.0
BYD3_k127_5294622_5 - - - - 0.00000000001249 68.0
BYD3_k127_5294622_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.00003793 54.0
BYD3_k127_5316284_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.713e-273 855.0
BYD3_k127_5316284_1 Protein kinase domain K12132 - 2.7.11.1 2.55e-263 846.0
BYD3_k127_5316284_10 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 303.0
BYD3_k127_5316284_11 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004627 296.0
BYD3_k127_5316284_12 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001526 268.0
BYD3_k127_5316284_13 DNA-templated transcription, initiation K02405 - - 0.00000000000000000000000000000000000000000000008797 179.0
BYD3_k127_5316284_14 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000002672 158.0
BYD3_k127_5316284_15 - - - - 0.00000000000000000000000000003315 124.0
BYD3_k127_5316284_16 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000002187 121.0
BYD3_k127_5316284_17 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.00000000000000000000003491 108.0
BYD3_k127_5316284_18 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000003413 98.0
BYD3_k127_5316284_19 sensor histidine kinase response - - - 0.0000000000000000002519 97.0
BYD3_k127_5316284_2 MatE - - - 2.489e-211 666.0
BYD3_k127_5316284_20 ATP hydrolysis coupled proton transport K02110,K02124 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000004267 82.0
BYD3_k127_5316284_21 Produces ATP from ADP in the presence of a proton gradient across the membrane K02122 - - 0.0000000006728 68.0
BYD3_k127_5316284_22 Protein of unknown function (DUF2892) - - - 0.0000000366 63.0
BYD3_k127_5316284_23 subunit (C K02119 - - 0.0000001353 63.0
BYD3_k127_5316284_25 denitrification pathway - - - 0.0004394 53.0
BYD3_k127_5316284_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 616.0
BYD3_k127_5316284_4 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 627.0
BYD3_k127_5316284_5 Pyrimidine nucleoside phosphorylase C-terminal domain K00756 - 2.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 584.0
BYD3_k127_5316284_6 M61 glycyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003277 586.0
BYD3_k127_5316284_7 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 577.0
BYD3_k127_5316284_8 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 537.0
BYD3_k127_5316284_9 PFAM V-type ATPase 116 kDa K02123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 333.0
BYD3_k127_5334783_0 FAD dependent oxidoreductase - - - 1.653e-218 690.0
BYD3_k127_5334783_1 TonB dependent receptor K02014 - - 1.185e-208 682.0
BYD3_k127_5334783_2 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 338.0
BYD3_k127_5348650_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 499.0
BYD3_k127_5348650_1 Alpha amylase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005762 469.0
BYD3_k127_5348650_10 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000006463 131.0
BYD3_k127_5348650_11 - - - - 0.000000001988 69.0
BYD3_k127_5348650_12 - - - - 0.00008475 53.0
BYD3_k127_5348650_2 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 352.0
BYD3_k127_5348650_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287 309.0
BYD3_k127_5348650_4 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 285.0
BYD3_k127_5348650_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000004866 204.0
BYD3_k127_5348650_6 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000004673 190.0
BYD3_k127_5348650_7 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000003735 174.0
BYD3_k127_5348650_8 Lipopolysaccharide-assembly - - - 0.0000000000000000000000000000000000000001604 157.0
BYD3_k127_5348650_9 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.00000000000000000000000000000000000007277 152.0
BYD3_k127_5355333_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003738 414.0
BYD3_k127_5355333_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 304.0
BYD3_k127_5355333_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000002195 128.0
BYD3_k127_5355333_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000897 105.0
BYD3_k127_5355333_4 ATP synthase B/B' CF(0) K02109 - - 0.0000000000004866 77.0
BYD3_k127_5355333_5 - - - - 0.000000006599 58.0
BYD3_k127_5355333_6 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.00000001974 58.0
BYD3_k127_5384537_0 Peptidase M16 - - - 0.0 1146.0
BYD3_k127_5384537_1 Large extracellular alpha-helical protein K06894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 475.0
BYD3_k127_5384537_10 FCD domain - - - 0.00000000000001259 78.0
BYD3_k127_5384537_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007193 306.0
BYD3_k127_5384537_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006908 304.0
BYD3_k127_5384537_4 Thrombospondin type 3 repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000002061 253.0
BYD3_k127_5384537_5 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000000000000000000000000000000000000000000000000000000000009976 220.0
BYD3_k127_5384537_6 - - - - 0.00000000000000000000000000000000000000000000000000000483 202.0
BYD3_k127_5384537_7 Pfam:UPF0118 - - - 0.0000000000000000000000000000000000000005463 164.0
BYD3_k127_5384537_8 OsmC-like protein K04063 - - 0.0000000000000000000000000000000000003059 144.0
BYD3_k127_5384537_9 cheY-homologous receiver domain - - - 0.00000000000000000000000000000001794 136.0
BYD3_k127_5491114_0 YjbR - - - 0.0000000000000000000000000000000000000000000000000001842 187.0
BYD3_k127_5491114_1 Belongs to the UPF0178 family K09768 - - 0.0000000000000000000000000000000000000000008766 170.0
BYD3_k127_5491114_2 - - - - 0.0000000000000000000000000000000000000000009633 166.0
BYD3_k127_5491114_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000003224 167.0
BYD3_k127_5491114_4 Predicted membrane protein (DUF2214) K08983 - - 0.0000000000000000000000000000000000000003077 155.0
BYD3_k127_5491114_5 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000001811 116.0
BYD3_k127_5491114_7 Methylmuconolactone methyl-isomerase - - - 0.00000000000002504 81.0
BYD3_k127_5491114_8 Mycolic acid cyclopropane synthetase - - - 0.000000000001354 76.0
BYD3_k127_5491114_9 Peptidase M3A and M3B thimet oligopeptidase F - - - 0.0000000002881 74.0
BYD3_k127_55034_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0 1375.0
BYD3_k127_55034_1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214,K02438 - 3.2.1.196,3.2.1.68 1.591e-301 946.0
BYD3_k127_55034_10 tRNA wobble adenosine to inosine editing - - - 0.0000000000000000000000000000000000000000000000000000000000000000004007 236.0
BYD3_k127_55034_11 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000001745 216.0
BYD3_k127_55034_13 acetyltransferase K22441 - 2.3.1.57 0.000000000000000000000000000000000000000000000292 180.0
BYD3_k127_55034_14 Belongs to the UPF0145 family - - - 0.00000000000000000000000000000000000000004888 154.0
BYD3_k127_55034_15 PFAM Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000003521 156.0
BYD3_k127_55034_16 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000003694 152.0
BYD3_k127_55034_17 PFAM Prephenate dehydrogenase K00210,K00220,K04517 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009095,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019438,GO:0019752,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0047794,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.3.1.12,1.3.1.43 0.0000000000000000000000000000000000000302 154.0
BYD3_k127_55034_18 Protein of unknown function (DUF1572) - - - 0.000000000000000000000000000000002974 136.0
BYD3_k127_55034_19 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000007932 132.0
BYD3_k127_55034_2 hydrolase activity, hydrolyzing O-glycosyl compounds K16147 - 2.4.99.16 6.454e-261 819.0
BYD3_k127_55034_20 - - - - 0.000000000000000000000000000007849 124.0
BYD3_k127_55034_21 Adenylyl- / guanylyl cyclase, catalytic domain K07814 - - 0.000000000000000000000000004718 115.0
BYD3_k127_55034_23 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800,K00945 - 2.5.1.19,2.7.4.25 0.000000002405 64.0
BYD3_k127_55034_24 Pfam:N_methyl_2 - - - 0.0005105 52.0
BYD3_k127_55034_3 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 5.825e-259 836.0
BYD3_k127_55034_4 synthase K00705,K06044 GO:0000272,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005984,GO:0005991,GO:0005992,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009251,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016052,GO:0016853,GO:0016866,GO:0030978,GO:0030980,GO:0034637,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0047470,GO:0071704,GO:1901575,GO:1901576 2.4.1.25,5.4.99.15 3.355e-207 677.0
BYD3_k127_55034_5 1,4-alpha-glucan branching enzyme activity K01236 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005984,GO:0005991,GO:0005992,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009251,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016052,GO:0016787,GO:0016798,GO:0030978,GO:0030980,GO:0033942,GO:0034637,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0071704,GO:1901575,GO:1901576 3.2.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000503 617.0
BYD3_k127_55034_6 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800,K00945 - 2.5.1.19,2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 336.0
BYD3_k127_55034_7 Polyphosphate kinase 2 (PPK2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 295.0
BYD3_k127_55034_8 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007038 276.0
BYD3_k127_55034_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001669 271.0
BYD3_k127_5525413_0 acyl-CoA dehydrogenase activity K22027 - 1.14.13.235 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005572 453.0
BYD3_k127_5525413_1 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 404.0
BYD3_k127_5525413_10 copper-translocating P-type ATPase K17686 - 3.6.3.54 0.00000000009253 65.0
BYD3_k127_5525413_11 TonB dependent receptor K02014,K16089 - - 0.000000042 66.0
BYD3_k127_5525413_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 328.0
BYD3_k127_5525413_3 methylisocitrate lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001989 285.0
BYD3_k127_5525413_4 AlkA N-terminal domain K13529,K13530 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000002536 226.0
BYD3_k127_5525413_5 - - - - 0.00000000000000000000000000000000000000000000001097 188.0
BYD3_k127_5525413_6 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000004416 168.0
BYD3_k127_5525413_7 Protein of unknown function (DUF1460) - - - 0.00000000000000000000000000000000000000000006945 176.0
BYD3_k127_5525413_8 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000005006 120.0
BYD3_k127_5525413_9 glyoxalase III activity - - - 0.00000000000000000000007236 111.0
BYD3_k127_5528914_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 9.535e-289 927.0
BYD3_k127_5528914_1 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000006255 194.0
BYD3_k127_5528914_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000004246 145.0
BYD3_k127_5528914_3 HlyD family secretion protein - - - 0.0000000000000000000000002222 115.0
BYD3_k127_5528914_4 Protein of unknown function (DUF2892) - - - 0.0000000000000004815 81.0
BYD3_k127_5528914_5 Glucose dehydrogenase K00117 - 1.1.5.2 0.00000000000001579 78.0
BYD3_k127_5557031_0 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 371.0
BYD3_k127_5557031_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009034 277.0
BYD3_k127_5557031_2 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009341 275.0
BYD3_k127_5557031_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000009579 205.0
BYD3_k127_5557031_4 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000008811 162.0
BYD3_k127_5569141_0 AcrB/AcrD/AcrF family - - - 0.0 1034.0
BYD3_k127_5569141_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.157e-261 820.0
BYD3_k127_5569141_10 Putative ABC exporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004028 281.0
BYD3_k127_5569141_11 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000006231 253.0
BYD3_k127_5569141_12 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000001855 249.0
BYD3_k127_5569141_13 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000005227 214.0
BYD3_k127_5569141_14 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000002841 211.0
BYD3_k127_5569141_15 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000000000219 194.0
BYD3_k127_5569141_16 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000412 175.0
BYD3_k127_5569141_17 - - - - 0.0000000000000000000000000000000000001522 161.0
BYD3_k127_5569141_18 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000002 143.0
BYD3_k127_5569141_19 DoxX K15977 - - 0.0000000000000000000000000000002147 140.0
BYD3_k127_5569141_2 Bacterial membrane protein, YfhO - - - 3.417e-238 760.0
BYD3_k127_5569141_20 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000001653 111.0
BYD3_k127_5569141_21 Lipopolysaccharide-assembly, LptC-related - - - 0.000003048 59.0
BYD3_k127_5569141_3 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002931 439.0
BYD3_k127_5569141_4 ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 415.0
BYD3_k127_5569141_5 SIS domain K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 368.0
BYD3_k127_5569141_6 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 353.0
BYD3_k127_5569141_7 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 329.0
BYD3_k127_5569141_8 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009469 280.0
BYD3_k127_5569141_9 Acetamidase/Formamidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002803 297.0
BYD3_k127_5584724_0 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 366.0
BYD3_k127_5584724_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 368.0
BYD3_k127_5584724_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002188 286.0
BYD3_k127_5584724_3 Heat induced stress protein YflT - - - 0.0000000000000000000000000000000000000000000000000000001078 207.0
BYD3_k127_5584724_4 - - - - 0.00000000000972 76.0
BYD3_k127_5584724_5 Ribosomal protein S21 K02970 - - 0.0000000000512 65.0
BYD3_k127_5584724_6 - - - - 0.00000001458 68.0
BYD3_k127_5591723_0 impB/mucB/samB family K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000004937 208.0
BYD3_k127_5591723_1 Phosphate-selective porin O and P K07221 - - 0.000000000000000000000000000000000000000000000000000001414 206.0
BYD3_k127_5591723_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000455 179.0
BYD3_k127_5591723_3 Putative stress-induced transcription regulator - - - 0.000000000000000000000000001815 121.0
BYD3_k127_5591723_4 Alpha beta hydrolase - - - 0.000000002223 60.0
BYD3_k127_5591723_5 Uncharacterized small protein (DUF2292) - - - 0.00001349 52.0
BYD3_k127_5690845_0 Ribosomal protein S2 K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000506 358.0
BYD3_k127_5690845_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 350.0
BYD3_k127_5690845_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 336.0
BYD3_k127_5690845_3 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007912 294.0
BYD3_k127_5690845_4 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008114 255.0
BYD3_k127_5690845_5 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000004701 226.0
BYD3_k127_5690845_6 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000003656 222.0
BYD3_k127_5690845_7 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000006198 187.0
BYD3_k127_5692005_0 Large extracellular alpha-helical protein K06894 - - 0.0 1626.0
BYD3_k127_5692005_1 penicillin binding K05367 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006535 387.0
BYD3_k127_5768721_0 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 400.0
BYD3_k127_5768721_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000008843 226.0
BYD3_k127_5768721_2 VIT family - - - 0.00000000000000000000000000000000008243 139.0
BYD3_k127_5768721_3 - - - - 0.000000000000001264 78.0
BYD3_k127_5854427_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 6.865e-199 638.0
BYD3_k127_5854427_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 8.921e-197 631.0
BYD3_k127_5854427_10 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 316.0
BYD3_k127_5854427_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 317.0
BYD3_k127_5854427_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 321.0
BYD3_k127_5854427_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001044 286.0
BYD3_k127_5854427_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006379 271.0
BYD3_k127_5854427_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001887 255.0
BYD3_k127_5854427_16 Belongs to the carbamate kinase family K00926 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008804,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019546,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000004572 245.0
BYD3_k127_5854427_17 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000002176 248.0
BYD3_k127_5854427_18 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000003976 236.0
BYD3_k127_5854427_19 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000000000001369 142.0
BYD3_k127_5854427_2 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 625.0
BYD3_k127_5854427_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000003103 121.0
BYD3_k127_5854427_21 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000000002873 109.0
BYD3_k127_5854427_22 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000002543 113.0
BYD3_k127_5854427_23 Leucyl aminopeptidase K19701 - 3.4.11.10,3.4.11.6 0.000000000000000004186 100.0
BYD3_k127_5854427_24 4Fe-4S binding domain K00240 - 1.3.5.1,1.3.5.4 0.00000001937 55.0
BYD3_k127_5854427_3 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005849 599.0
BYD3_k127_5854427_4 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004265 572.0
BYD3_k127_5854427_5 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 525.0
BYD3_k127_5854427_6 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005919 519.0
BYD3_k127_5854427_7 Phosphoglucomutase/phosphomannomutase, C-terminal domain K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000038 501.0
BYD3_k127_5854427_8 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 436.0
BYD3_k127_5854427_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006878 337.0
BYD3_k127_5855052_0 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 483.0
BYD3_k127_5855052_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 304.0
BYD3_k127_5855052_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001723 227.0
BYD3_k127_5855052_3 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000005799 131.0
BYD3_k127_5868089_0 ABC transporter transmembrane region K18889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 583.0
BYD3_k127_5868089_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 554.0
BYD3_k127_5868089_2 - - - - 0.00000000000000000000000002666 119.0
BYD3_k127_5868601_0 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 595.0
BYD3_k127_5868601_1 L-seryl-tRNA selenium transferase K01042 - 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000004632 233.0
BYD3_k127_5868601_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000005132 208.0
BYD3_k127_5868601_3 HAD-hyrolase-like K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000001647 178.0
BYD3_k127_5917613_1 Phospholipase D. Active site motifs. - - - 0.0000000000000000005049 103.0
BYD3_k127_5928451_0 TonB dependent receptor - - - 5.021e-206 667.0
BYD3_k127_5928451_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004043 603.0
BYD3_k127_5928451_10 von Willebrand factor type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000006595 250.0
BYD3_k127_5928451_11 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000001975 229.0
BYD3_k127_5928451_12 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000000000003862 222.0
BYD3_k127_5928451_13 S4 RNA-binding domain K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000004188 222.0
BYD3_k127_5928451_14 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.000000000000000000000000000000000000000000000002402 180.0
BYD3_k127_5928451_15 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000006713 193.0
BYD3_k127_5928451_16 Oxygen tolerance - - - 0.0000000000000000000000000000000000000007445 172.0
BYD3_k127_5928451_17 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000209 145.0
BYD3_k127_5928451_18 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000003184 142.0
BYD3_k127_5928451_19 Zinc finger domain - - - 0.0000000000000001214 93.0
BYD3_k127_5928451_2 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005333 517.0
BYD3_k127_5928451_20 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000504 70.0
BYD3_k127_5928451_21 MotA TolQ ExbB proton channel family protein K03561 - - 0.0003676 45.0
BYD3_k127_5928451_3 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 460.0
BYD3_k127_5928451_4 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 450.0
BYD3_k127_5928451_5 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 409.0
BYD3_k127_5928451_6 Protein of unknown function (DUF1194) K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 338.0
BYD3_k127_5928451_7 cAMP biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 330.0
BYD3_k127_5928451_8 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 306.0
BYD3_k127_5928451_9 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000002122 242.0
BYD3_k127_5950263_0 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009227 457.0
BYD3_k127_5950263_1 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 372.0
BYD3_k127_5950263_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000064 357.0
BYD3_k127_5950263_3 HAMP domain K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009619 351.0
BYD3_k127_5950263_4 Transcriptional regulatory protein, C terminal K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002681 312.0
BYD3_k127_5950263_5 PAP2 superfamily K19302 - 3.6.1.27 0.0000000000000000000000000000000000000675 149.0
BYD3_k127_5950263_6 DNA-binding transcription factor activity K03892 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0043170,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0046685,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.0000000001909 73.0
BYD3_k127_6026831_0 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 3.263e-225 721.0
BYD3_k127_6026831_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 519.0
BYD3_k127_6026831_10 - - - - 0.000000000000000000821 102.0
BYD3_k127_6026831_11 Methyltransferase - - - 0.0000000000005811 79.0
BYD3_k127_6026831_12 polysaccharide biosynthetic process - - - 0.00000000001709 69.0
BYD3_k127_6026831_2 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 524.0
BYD3_k127_6026831_3 HNH nucleases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 292.0
BYD3_k127_6026831_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009511 298.0
BYD3_k127_6026831_5 Amidohydrolase family K12960,K20810 - 3.5.4.28,3.5.4.31,3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000001625 282.0
BYD3_k127_6026831_6 surface antigen K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000001889 266.0
BYD3_k127_6026831_7 Bacterial protein of unknown function (DUF853) K06915 - - 0.0000000000000000000000000000000000000000000000000003921 191.0
BYD3_k127_6026831_8 Regulates arginine biosynthesis genes K03402 - - 0.0000000000000000000000004192 121.0
BYD3_k127_6026831_9 VanZ like family - - - 0.000000000000000000114 103.0
BYD3_k127_6029117_0 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 556.0
BYD3_k127_6029117_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003662 489.0
BYD3_k127_6029117_2 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000196 283.0
BYD3_k127_6047292_0 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 419.0
BYD3_k127_6047292_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009389 328.0
BYD3_k127_6047292_2 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000001011 186.0
BYD3_k127_6067271_0 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 468.0
BYD3_k127_6067271_1 efflux transmembrane transporter activity K18300,K18308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006574 394.0
BYD3_k127_6067271_2 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 317.0
BYD3_k127_6067271_3 ABC transporter K02047 - - 0.0000000000000000000000000000000000000000000000000000000000000004938 221.0
BYD3_k127_6067271_4 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000000000004222 112.0
BYD3_k127_6067271_5 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000144 120.0
BYD3_k127_6083370_0 Transglycosylase K21464 - 2.4.1.129,3.4.16.4 6.968e-229 734.0
BYD3_k127_6083370_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 576.0
BYD3_k127_6083370_10 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000003992 225.0
BYD3_k127_6083370_11 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000001738 218.0
BYD3_k127_6083370_12 Aerotolerance regulator N-terminal K07114 - - 0.0000000000000000000000000000000000000000000000000000000000349 218.0
BYD3_k127_6083370_13 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000001426 207.0
BYD3_k127_6083370_14 - - - - 0.00000000000000000000000000000000000001162 153.0
BYD3_k127_6083370_15 Nitroreductase family - - - 0.0000000000000000000000000000000000001172 148.0
BYD3_k127_6083370_16 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000000000000000004644 156.0
BYD3_k127_6083370_17 Mo-molybdopterin cofactor metabolic process K03636,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000695 119.0
BYD3_k127_6083370_18 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000008673 122.0
BYD3_k127_6083370_19 COG4464 Capsular polysaccharide biosynthesis protein - - - 0.000000000000000000000002112 120.0
BYD3_k127_6083370_2 amino acid activation for nonribosomal peptide biosynthetic process K05889,K12132 - 1.1.2.6,2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 469.0
BYD3_k127_6083370_20 lytic transglycosylase activity - - - 0.00000000000002566 83.0
BYD3_k127_6083370_21 Psort location CytoplasmicMembrane, score - - - 0.000001734 61.0
BYD3_k127_6083370_22 protein conserved in bacteria - - - 0.00001671 57.0
BYD3_k127_6083370_23 TIGRFAM outer membrane autotransporter barrel - - - 0.00006577 52.0
BYD3_k127_6083370_3 PFAM aminotransferase class I and II K10907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 456.0
BYD3_k127_6083370_4 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 405.0
BYD3_k127_6083370_5 Xylose isomerase-like TIM barrel K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 392.0
BYD3_k127_6083370_6 Phospholipase D Transphosphatidylase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 329.0
BYD3_k127_6083370_7 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009214 304.0
BYD3_k127_6083370_8 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000743 248.0
BYD3_k127_6083370_9 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000008794 231.0
BYD3_k127_6127494_0 Hydrogenase formation hypA family K04654 - - 1.502e-209 657.0
BYD3_k127_6127494_1 AIR synthase related protein, C-terminal domain K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 327.0
BYD3_k127_6127494_2 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 308.0
BYD3_k127_6127494_3 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008109 261.0
BYD3_k127_6127494_4 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000001071 243.0
BYD3_k127_6127494_5 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000005001 182.0
BYD3_k127_6127494_6 Helix-turn-helix domain - - - 0.000000000000000000000000000000000003312 147.0
BYD3_k127_6127494_7 HupF/HypC family K04653 - - 0.000000000000000000000000000001879 123.0
BYD3_k127_6163596_0 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007771 596.0
BYD3_k127_6163596_1 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009682 510.0
BYD3_k127_6163596_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000003316 75.0
BYD3_k127_6163596_11 Tetratricopeptide repeat - - - 0.000000001665 70.0
BYD3_k127_6163596_2 Ftsk_gamma K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000435 427.0
BYD3_k127_6163596_3 SurA N-terminal domain K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000893 368.0
BYD3_k127_6163596_4 Polyprenyl synthetase K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008783 344.0
BYD3_k127_6163596_5 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 324.0
BYD3_k127_6163596_6 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000006187 166.0
BYD3_k127_6163596_7 2-phosphosulpholactate phosphatase K05979 - 3.1.3.71 0.00000000000000000000000000000000000000000001894 184.0
BYD3_k127_6163596_8 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000004777 141.0
BYD3_k127_6163596_9 Domain of unknown function (DUF4321) - - - 0.000000000000002976 88.0
BYD3_k127_6179268_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0 1094.0
BYD3_k127_6179268_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 529.0
BYD3_k127_6179268_10 Protein tyrosine kinase - - - 0.0003947 51.0
BYD3_k127_6179268_2 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 531.0
BYD3_k127_6179268_3 KR domain K00059,K00076 - 1.1.1.100,1.1.1.159 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004625 431.0
BYD3_k127_6179268_4 4Fe-4S binding domain K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 355.0
BYD3_k127_6179268_5 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000003266 216.0
BYD3_k127_6179268_6 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000006306 211.0
BYD3_k127_6179268_7 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000001245 214.0
BYD3_k127_6179268_8 Protein involved in formate dehydrogenase formation K02380 - - 0.0000000000000000000000003875 119.0
BYD3_k127_6179268_9 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0001065 51.0
BYD3_k127_6256933_0 Belongs to the bacterial plant glucose-1-phosphate adenylyltransferase family K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 520.0
BYD3_k127_6256933_1 Thiolase, C-terminal domain K00626,K07508 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 474.0
BYD3_k127_6256933_2 FAD linked oxidases, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 385.0
BYD3_k127_6256933_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 371.0
BYD3_k127_6256933_4 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001053 301.0
BYD3_k127_6256933_5 - - - - 0.000000000000000000000000000000006105 138.0
BYD3_k127_6256933_6 Protein of unknown function DUF116 - - - 0.0000000000000000000000000000001057 134.0
BYD3_k127_6256933_7 - - - - 0.000000000000007913 76.0
BYD3_k127_6256933_8 Predicted membrane protein (DUF2231) - - - 0.0000003298 60.0
BYD3_k127_625807_0 Formylmethanofuran dehydrogenase subunit A K00200 GO:0003674,GO:0003824,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0044237,GO:0044281 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 624.0
BYD3_k127_625807_1 Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT) K00672 GO:0003674,GO:0003824,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0030270,GO:0043446,GO:0044237,GO:0044281,GO:0071704 2.3.1.101 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 353.0
BYD3_k127_625807_10 formylmethanofuran dehydrogenase, subunit K00201 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000003288 214.0
BYD3_k127_625807_11 GXGXG motif K00202 - 1.2.7.12 0.0000000000000000000000000000003735 134.0
BYD3_k127_625807_12 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000002352 100.0
BYD3_k127_625807_13 EthD domain - - - 0.0000000000000005065 89.0
BYD3_k127_625807_14 EthD domain - - - 0.00000000000004119 83.0
BYD3_k127_625807_2 Catalyzes the hydrolysis of methenyl-H(4)MPT( ) to 5- formyl-H(4)MPT K01499 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016787,GO:0016810,GO:0016814,GO:0018759,GO:0019238,GO:0043446,GO:0044237,GO:0044424,GO:0044464,GO:0071704 3.5.4.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005169 325.0
BYD3_k127_625807_3 Belongs to the RimK family K05827,K05844 - 6.3.2.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 299.0
BYD3_k127_625807_4 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000174 275.0
BYD3_k127_625807_5 Methylene-tetrahydromethanopterin dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001335 270.0
BYD3_k127_625807_6 ATP:dephospho-CoA triphosphoribosyl transferase K05966 - 2.4.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000000001287 263.0
BYD3_k127_625807_7 PFAM Formaldehyde-activating enzyme (Fae) K10713 - 4.2.1.147 0.0000000000000000000000000000000000000000000000000000000000000000002457 237.0
BYD3_k127_625807_8 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001125 243.0
BYD3_k127_625807_9 CO2 hydration protein (ChpXY) - - - 0.0000000000000000000000000000000000000000000000000000000000000002713 243.0
BYD3_k127_6260171_0 lysine biosynthetic process via aminoadipic acid - - - 3.362e-257 815.0
BYD3_k127_6260171_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008178 429.0
BYD3_k127_6260171_10 protein conserved in bacteria K09919 - - 0.000002262 61.0
BYD3_k127_6260171_2 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004819 307.0
BYD3_k127_6260171_3 Mur ligase middle domain protein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000001193 273.0
BYD3_k127_6260171_4 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000004516 258.0
BYD3_k127_6260171_5 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000002762 229.0
BYD3_k127_6260171_6 coenzyme F390 K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000003329 204.0
BYD3_k127_6260171_7 light absorption - - - 0.0000000000000000000000001756 110.0
BYD3_k127_6260171_8 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate - - - 0.0000000000000000004531 102.0
BYD3_k127_6260171_9 - - - - 0.0000000007975 70.0
BYD3_k127_6269784_0 Tetratricopeptide repeat K12132 - 2.7.11.1 9.553e-198 655.0
BYD3_k127_6269784_1 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000985 186.0
BYD3_k127_6269784_2 protein possibly involved in utilization of glycolate and propanediol - - - 0.0000000000000000000001848 108.0
BYD3_k127_6273002_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006292 434.0
BYD3_k127_6273002_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000001567 211.0
BYD3_k127_6273002_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000006151 196.0
BYD3_k127_6273769_0 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008089 362.0
BYD3_k127_6273769_1 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006242 323.0
BYD3_k127_6273769_2 ADP-glyceromanno-heptose 6-epimerase activity K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 316.0
BYD3_k127_6273769_3 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005473 288.0
BYD3_k127_6273769_4 Sulfotransferase - - - 0.00000000000000000000000000000000000000000000000000000000006154 214.0
BYD3_k127_6273769_5 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000008915 209.0
BYD3_k127_6273769_6 Glycosyltransferase family 25 (LPS biosynthesis protein) K07270 - - 0.0000000000000000000000000000000000000000000000000000007774 203.0
BYD3_k127_6273769_7 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor - - - 0.000000000000000000000000000000000000000000000000000007187 205.0
BYD3_k127_6273769_8 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000003136 186.0
BYD3_k127_6273769_9 - - - - 0.000009839 52.0
BYD3_k127_6289566_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.083e-216 698.0
BYD3_k127_6289566_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 575.0
BYD3_k127_6289566_10 - - - - 0.0000000000000000000000000000681 134.0
BYD3_k127_6289566_11 - - - - 0.0000000000000002993 89.0
BYD3_k127_6289566_12 protein kinase activity - - - 0.000000000000000589 84.0
BYD3_k127_6289566_13 - - - - 0.0000000000002526 82.0
BYD3_k127_6289566_14 Pilus assembly protein, PilO K02664 - - 0.000000009172 64.0
BYD3_k127_6289566_2 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 580.0
BYD3_k127_6289566_3 AMIN domain K02666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 491.0
BYD3_k127_6289566_4 Type IV pilus assembly protein PilM; K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 449.0
BYD3_k127_6289566_5 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009523 404.0
BYD3_k127_6289566_6 Phage integrase, N-terminal SAM-like domain K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 327.0
BYD3_k127_6289566_7 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000007068 258.0
BYD3_k127_6289566_8 Fimbrial assembly protein (PilN) - - - 0.000000000000000000000000000000004163 137.0
BYD3_k127_6289566_9 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000000001013 135.0
BYD3_k127_6415000_0 Peptidase family M1 domain - - - 3.61e-217 685.0
BYD3_k127_6415000_1 abc transporter atp-binding protein K06147 - - 6.55e-217 690.0
BYD3_k127_6415000_2 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005995 519.0
BYD3_k127_6415000_3 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001949 243.0
BYD3_k127_6415000_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000001681 179.0
BYD3_k127_6417153_0 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 447.0
BYD3_k127_6417153_1 Putative aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001311 270.0
BYD3_k127_6417153_2 Histidine biosynthesis bifunctional protein HisIE K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000001081 187.0
BYD3_k127_6429158_0 FtsX-like permease family K02004 - - 2.384e-225 723.0
BYD3_k127_6429158_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003326 557.0
BYD3_k127_6429158_10 phosphoribosyl transferase K07100 - - 0.00000000000000000000000000000000000000005799 160.0
BYD3_k127_6429158_11 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000006388 160.0
BYD3_k127_6429158_12 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000008981 149.0
BYD3_k127_6429158_13 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000004654 158.0
BYD3_k127_6429158_14 - - - - 0.000000000000000000000000000000000000009281 166.0
BYD3_k127_6429158_15 Signal transduction histidine kinase K07640 - 2.7.13.3 0.0000000000000000000000000000000000001472 158.0
BYD3_k127_6429158_16 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000004284 152.0
BYD3_k127_6429158_17 response regulator - - - 0.000000000000000000000000000485 118.0
BYD3_k127_6429158_18 Outer membrane protein beta-barrel domain - - - 0.000000000000000000007325 99.0
BYD3_k127_6429158_19 CBS domain K07182 - - 0.00000000000000005374 87.0
BYD3_k127_6429158_2 Glycosyl transferases group 1 K13057 - 2.4.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 520.0
BYD3_k127_6429158_20 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000008759 91.0
BYD3_k127_6429158_21 Hydrolase - - - 0.000000000004624 78.0
BYD3_k127_6429158_22 Group II decarboxylase family protein K01580 - 4.1.1.15 0.000000000004643 70.0
BYD3_k127_6429158_23 Universal stress protein - - - 0.00000000002302 74.0
BYD3_k127_6429158_3 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 393.0
BYD3_k127_6429158_4 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 318.0
BYD3_k127_6429158_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004771 323.0
BYD3_k127_6429158_6 Hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 326.0
BYD3_k127_6429158_7 Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000008345 222.0
BYD3_k127_6429158_8 Endonuclease Exonuclease Phosphatase - - - 0.00000000000000000000000000000000000000000000000003078 190.0
BYD3_k127_6429158_9 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000007137 178.0
BYD3_k127_6509332_0 Uncharacterized protein family (UPF0051) K09014 - - 1.987e-258 803.0
BYD3_k127_6509332_1 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 389.0
BYD3_k127_6509332_10 protein import K06867 - - 0.00000005133 63.0
BYD3_k127_6509332_2 3'-5' exonuclease K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 370.0
BYD3_k127_6509332_3 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008258 296.0
BYD3_k127_6509332_4 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000004028 211.0
BYD3_k127_6509332_5 HTH domain - - - 0.0000000000000000000000000000000000000000007153 168.0
BYD3_k127_6509332_6 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000001054 156.0
BYD3_k127_6509332_7 peptide deformylase activity K01462 - 3.5.1.88 0.000000000000000000000000000000000000002808 153.0
BYD3_k127_6509332_8 metal-sulfur cluster biosynthetic - - - 0.00000000000000000000000004427 118.0
BYD3_k127_6509332_9 Thioesterase K07107,K12500 - - 0.0000000000000000001324 102.0
BYD3_k127_6534157_0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 1.799e-292 917.0
BYD3_k127_6534157_1 - - - - 6.454e-228 728.0
BYD3_k127_6534157_10 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000001727 109.0
BYD3_k127_6534157_2 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 449.0
BYD3_k127_6534157_3 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 427.0
BYD3_k127_6534157_4 Type I phosphodiesterase / nucleotide pyrophosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 376.0
BYD3_k127_6534157_5 amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004954 287.0
BYD3_k127_6534157_6 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003901 263.0
BYD3_k127_6534157_7 hydroperoxide reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000002774 228.0
BYD3_k127_6534157_8 Diacylglycerol kinase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000756 220.0
BYD3_k127_6534157_9 Protein of unknown function (DUF1097) - - - 0.0000000000000000000005088 102.0
BYD3_k127_661129_0 LVIVD repeat - - - 2.686e-260 818.0
BYD3_k127_661129_1 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 376.0
BYD3_k127_661129_2 Nucleoside recognition K06373 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 362.0
BYD3_k127_661129_3 Nucleoside recognition K06374 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001032 250.0
BYD3_k127_661129_4 Domain of unknown function (DUF305) - - - 0.00000000000000000000000000000000000000000000000000000002287 203.0
BYD3_k127_661129_5 PFAM OmpA MotB domain protein K03640 - - 0.00000000000000000000000000005948 123.0
BYD3_k127_661129_6 Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00000000000000000000000000008147 124.0
BYD3_k127_661129_7 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000003115 83.0
BYD3_k127_6623578_0 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 596.0
BYD3_k127_6623578_1 phosphorelay sensor kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 485.0
BYD3_k127_6623578_2 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003652 409.0
BYD3_k127_6623578_3 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 339.0
BYD3_k127_6623578_4 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000095 327.0
BYD3_k127_6623578_5 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000001536 201.0
BYD3_k127_6623578_6 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000000000000000000000002704 196.0
BYD3_k127_6623578_7 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000000000001498 150.0
BYD3_k127_6645561_0 sigma factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 551.0
BYD3_k127_6645561_1 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 529.0
BYD3_k127_6645561_10 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000006572 215.0
BYD3_k127_6645561_11 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000000000004468 207.0
BYD3_k127_6645561_12 hydrolase, CocE NonD family K06978 - - 0.0000000000000000000000000000000000000000000000000000006133 207.0
BYD3_k127_6645561_13 Uncharacterised protein family UPF0066 - - - 0.0000000000000000000000000000000000000000000001664 174.0
BYD3_k127_6645561_14 Putative heavy-metal-binding - - - 0.000000000000000000000000000000000000000002988 158.0
BYD3_k127_6645561_15 glyoxalase III activity - - - 0.000000000000000000000000000000000000000004784 165.0
BYD3_k127_6645561_16 Cold shock K03704 - - 0.000000000000000000000000000000001871 130.0
BYD3_k127_6645561_17 Histidine kinase - - - 0.0000000000000000000000403 104.0
BYD3_k127_6645561_18 hyperosmotic response - - - 0.00000000003757 67.0
BYD3_k127_6645561_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009024 494.0
BYD3_k127_6645561_3 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005818 463.0
BYD3_k127_6645561_4 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 421.0
BYD3_k127_6645561_5 Oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003901 396.0
BYD3_k127_6645561_6 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006084,GO:0006139,GO:0006163,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009117,GO:0009150,GO:0009259,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019442,GO:0019637,GO:0019693,GO:0019752,GO:0020037,GO:0022607,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043603,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051186,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0072521,GO:0097159,GO:1901135,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 335.0
BYD3_k127_6645561_7 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 309.0
BYD3_k127_6645561_8 DNA alkylation repair enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001067 259.0
BYD3_k127_6645561_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000945 262.0
BYD3_k127_6653230_0 Glycosyl transferase 4-like K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 443.0
BYD3_k127_6653230_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000001423 264.0
BYD3_k127_6653230_2 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K04040,K20616 - 2.5.1.133,2.5.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000001497 270.0
BYD3_k127_6653230_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000001036 201.0
BYD3_k127_6653230_4 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.00000000000000000000000000002247 127.0
BYD3_k127_6653230_5 cysteine-type peptidase activity K19224,K21471 - - 0.0000000000000000000000001965 118.0
BYD3_k127_667430_0 biosynthesis protein E K06139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006345 435.0
BYD3_k127_667430_1 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 - 1.3.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 286.0
BYD3_k127_667430_2 Daunorubicin resistance abc transporter atpase subunit K01990 - - 0.00000000000000000000000000000000000000000000000000000000643 213.0
BYD3_k127_667430_3 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000002328 198.0
BYD3_k127_667430_4 Transport Permease Protein K01992 - - 0.0000000000000000000000000000000000001392 160.0
BYD3_k127_667430_5 May be involved in the transport of PQQ or its precursor to the periplasm K06136 - - 0.00000000000000000000000000002454 119.0
BYD3_k127_667430_6 Coenzyme PQQ synthesis protein D (PqqD) K06138 - - 0.000000001433 69.0
BYD3_k127_6696041_0 DNA polymerase III alpha subunit K02337,K14162 - 2.7.7.7 1.783e-207 674.0
BYD3_k127_6696041_1 LytB protein K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 519.0
BYD3_k127_6696041_2 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 399.0
BYD3_k127_6696041_3 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 340.0
BYD3_k127_6696041_4 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 308.0
BYD3_k127_6696041_5 converts alpha-aldose to the beta-anomer - - - 0.0000000000000000000000000000000000000000000000000000000004143 218.0
BYD3_k127_6696041_6 regulation of circadian rhythm K17071 - - 0.0000000000000000000000000000000000005997 148.0
BYD3_k127_6696041_7 Late embryogenesis abundant protein - - - 0.000456 50.0
BYD3_k127_674862_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0070011,GO:0070012,GO:0071704,GO:0140096,GO:1901564 3.4.21.83 2.875e-263 830.0
BYD3_k127_674862_1 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005441 424.0
BYD3_k127_674862_2 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000001882 214.0
BYD3_k127_674862_3 PrcB C-terminal - - - 0.0000000000007718 76.0
BYD3_k127_674862_4 DinB superfamily - - - 0.000000000009348 72.0
BYD3_k127_6842191_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 2.971e-243 775.0
BYD3_k127_6842191_1 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 452.0
BYD3_k127_6842191_10 CheC-like family K03410 - - 0.000000000000000000000000000000000000000000000000000000006255 224.0
BYD3_k127_6842191_11 Prokaryotic dksA/traR C4-type zinc finger - - - 0.00000000000000000000000000000000000000000000000002106 205.0
BYD3_k127_6842191_12 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000383 174.0
BYD3_k127_6842191_13 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000001162 154.0
BYD3_k127_6842191_14 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.000000000000000000000000000000001153 138.0
BYD3_k127_6842191_15 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000001294 132.0
BYD3_k127_6842191_16 Roadblock/LC7 domain - - - 0.00000001602 67.0
BYD3_k127_6842191_17 peptidyl-tyrosine sulfation - - - 0.00002121 55.0
BYD3_k127_6842191_18 distant relative of homeotic protein bithoraxoid K07131 - - 0.0003508 50.0
BYD3_k127_6842191_19 PFAM CheW domain protein, response regulator receiver K03415 - - 0.0009203 49.0
BYD3_k127_6842191_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008968 441.0
BYD3_k127_6842191_3 P2 response regulator binding domain K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007643 419.0
BYD3_k127_6842191_4 Bacterial dnaA protein K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 415.0
BYD3_k127_6842191_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 305.0
BYD3_k127_6842191_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000532 289.0
BYD3_k127_6842191_7 Small GTP-binding protein K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003078 278.0
BYD3_k127_6842191_8 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000000000000007874 214.0
BYD3_k127_6842191_9 protein-glutamate O-methyltransferase activity K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000004189 225.0
BYD3_k127_6846553_0 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 482.0
BYD3_k127_6846553_1 Phosphoesterase K07098 - - 0.000000000000000000000000000001682 131.0
BYD3_k127_6846553_2 ATP-binding region, ATPase domain protein - - - 0.0000000000000000004601 93.0
BYD3_k127_6859376_0 Protein of unknown function, DUF255 K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004001 603.0
BYD3_k127_6859376_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 442.0
BYD3_k127_6859376_2 Peptidase S9, prolyl oligopeptidase active site domain protein K01322 - 3.4.21.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005269 409.0
BYD3_k127_6859376_3 Putative glycosyl hydrolase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001059 275.0
BYD3_k127_6859376_4 Thrombospondin type 3 repeat - - - 0.00000000000000000000000000000000000000000000000000000000000003356 233.0
BYD3_k127_6859376_5 Glucose / Sorbosone dehydrogenase - - - 0.0000000000007244 73.0
BYD3_k127_6859376_6 Rdx family K07401 - - 0.000000001543 61.0
BYD3_k127_68990_0 Acyclic terpene utilisation family protein AtuA - - - 1.49e-208 658.0
BYD3_k127_68990_1 RecQ zinc-binding K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007644 343.0
BYD3_k127_68990_2 enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000008712 209.0
BYD3_k127_68990_3 - - - - 0.0000000000000000000000000000000000000001493 154.0
BYD3_k127_68990_4 Extracellular nuclease - - - 0.000000000000000000000000000000000000001352 166.0
BYD3_k127_68990_5 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000007728 124.0
BYD3_k127_6958223_0 Aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 1.626e-222 702.0
BYD3_k127_6958223_1 Cytochrome C oxidase subunit I K02274 - 1.9.3.1 5.276e-194 626.0
BYD3_k127_6958223_11 - - - - 0.0000733 53.0
BYD3_k127_6958223_2 C4-dicarboxylate anaerobic carrier - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005706 489.0
BYD3_k127_6958223_3 Fatty acid desaturase K03921 - 1.14.19.11,1.14.19.2,1.14.19.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007912 448.0
BYD3_k127_6958223_4 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001399 261.0
BYD3_k127_6958223_5 cytochrome c oxidase (Subunit II) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000001371 196.0
BYD3_k127_6958223_6 Thioredoxin-like domain K03672 - 1.8.1.8 0.0000000000000000000000000000000000000000000025 168.0
BYD3_k127_6958223_7 Divalent ion tolerance protein K03926 - - 0.000000000000000000000000002331 117.0
BYD3_k127_6958223_8 SCO1/SenC K07152 - - 0.00000000000000004854 96.0
BYD3_k127_6958223_9 YGGT family K02221 - - 0.00000000000006359 76.0
BYD3_k127_702767_0 Methylmalonyl-CoA mutase K01848,K11942 - 5.4.99.13,5.4.99.2 8.71e-255 816.0
BYD3_k127_702767_1 Carboxyl transferase domain - - - 6.25e-249 778.0
BYD3_k127_702767_10 Transporter associated domain - - - 0.00000000000000000000000000000000000009776 160.0
BYD3_k127_702767_11 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.000000000000000000000000000000001466 139.0
BYD3_k127_702767_12 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000001803 115.0
BYD3_k127_702767_2 Sulfate permease family K03321 - - 8.027e-217 686.0
BYD3_k127_702767_3 ArgK protein K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 384.0
BYD3_k127_702767_4 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 384.0
BYD3_k127_702767_5 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009281 370.0
BYD3_k127_702767_6 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004401 305.0
BYD3_k127_702767_7 B12 binding domain K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000596 226.0
BYD3_k127_702767_8 translation release factor activity K03265 GO:0001666,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0008150,GO:0009628,GO:0016020,GO:0030312,GO:0036293,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070482,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000158 226.0
BYD3_k127_702767_9 Transporter associated domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000001232 181.0
BYD3_k127_7073801_0 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004481 258.0
BYD3_k127_7073801_1 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000001689 190.0
BYD3_k127_7073801_2 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000009934 169.0
BYD3_k127_7133493_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 487.0
BYD3_k127_7133493_1 Surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 419.0
BYD3_k127_7133493_10 CYTH domain K01768,K05873 - 4.6.1.1 0.000000000000000000000000000000000002477 154.0
BYD3_k127_7133493_11 NlpC/P60 family - - - 0.0000000000000000000000000000000001904 145.0
BYD3_k127_7133493_12 Diacylglycerol kinase K19302 - 3.6.1.27 0.000000000000000000000000000705 127.0
BYD3_k127_7133493_13 Phosphoglycerate mutase family K08296 - - 0.00000000000006125 79.0
BYD3_k127_7133493_14 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000002017 82.0
BYD3_k127_7133493_2 Pyridine nucleotide-disulphide oxidoreductase K21567 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 362.0
BYD3_k127_7133493_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005123 371.0
BYD3_k127_7133493_4 Domains REC, sigma54 interaction, HTH8 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003589 352.0
BYD3_k127_7133493_5 Cytochrome c K07243 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005274 321.0
BYD3_k127_7133493_6 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000001176 273.0
BYD3_k127_7133493_7 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000007627 199.0
BYD3_k127_7133493_8 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000001092 199.0
BYD3_k127_7133493_9 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 - - 0.00000000000000000000000000000000000000000000001822 175.0
BYD3_k127_7173294_0 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 1.76e-201 639.0
BYD3_k127_7173294_1 cAMP biosynthetic process K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 521.0
BYD3_k127_7173294_2 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 299.0
BYD3_k127_7173294_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K00019,K07535 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.30 0.000000000000000000000000000000000000000000000000000000009523 217.0
BYD3_k127_7173294_4 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K07516 - 1.1.1.35 0.00000000000000000000000000000000000000008963 156.0
BYD3_k127_7200845_0 cellulose binding - - - 1.338e-216 678.0
BYD3_k127_7200845_1 Belongs to the sigma-70 factor family. ECF subfamily - - - 4.824e-204 641.0
BYD3_k127_7200845_10 Phospholipid methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000001588 244.0
BYD3_k127_7200845_11 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000001998 223.0
BYD3_k127_7200845_12 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000007804 210.0
BYD3_k127_7200845_13 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000000001129 227.0
BYD3_k127_7200845_14 Dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000001369 188.0
BYD3_k127_7200845_15 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000008748 184.0
BYD3_k127_7200845_16 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000001752 176.0
BYD3_k127_7200845_17 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000001893 179.0
BYD3_k127_7200845_18 - - - - 0.00000000000000000000000000000000000000000005069 175.0
BYD3_k127_7200845_19 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.00000000000000000000000000000000000000001186 159.0
BYD3_k127_7200845_2 COG0076 Glutamate decarboxylase and related PLP-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 458.0
BYD3_k127_7200845_20 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000003253 149.0
BYD3_k127_7200845_21 AraC-like ligand binding domain - - - 0.00000000000000000000000000000000000001894 154.0
BYD3_k127_7200845_22 Protein of unknown function (DUF962) - - - 0.00000000000000000000000000000000000004253 145.0
BYD3_k127_7200845_23 methyltransferase activity - - - 0.0000000000000000000000000000000000004484 150.0
BYD3_k127_7200845_24 light absorption - - - 0.000000000000000000000000000000000001179 153.0
BYD3_k127_7200845_25 TIGRFAM TIGR00725 family protein K06966 - 3.2.2.10 0.00000000000000000000000000000000321 141.0
BYD3_k127_7200845_26 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000000001971 140.0
BYD3_k127_7200845_27 Protein of unknown function (DUF1203) - - - 0.00000000000000000000000000004209 123.0
BYD3_k127_7200845_28 transferase activity, transferring acyl groups K03824 - - 0.00000000000000000000000000007044 123.0
BYD3_k127_7200845_29 lactoylglutathione lyase activity - - - 0.000000000000000000000000001438 120.0
BYD3_k127_7200845_3 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 307.0
BYD3_k127_7200845_31 Protein of unknown function (DUF3565) - - - 0.0000000000000000000000002672 111.0
BYD3_k127_7200845_33 Dodecin K09165 - - 0.0000000000000000001182 91.0
BYD3_k127_7200845_34 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000811 94.0
BYD3_k127_7200845_35 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000001204 91.0
BYD3_k127_7200845_36 GCN5-related N-acetyl-transferase K06975 - - 0.000000000000000001298 88.0
BYD3_k127_7200845_37 - - - - 0.000000000000000003213 89.0
BYD3_k127_7200845_38 SdpI/YhfL protein family - - - 0.00000000000000004198 87.0
BYD3_k127_7200845_4 Periplasmic component of the Tol biopolymer transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 318.0
BYD3_k127_7200845_40 DinB family - - - 0.00000000000001214 86.0
BYD3_k127_7200845_41 Cupin 2, conserved barrel domain protein - - - 0.00000000000008845 77.0
BYD3_k127_7200845_42 Acetyltransferase (GNAT) domain - - - 0.00000000009155 68.0
BYD3_k127_7200845_43 - - - - 0.00000000009922 72.0
BYD3_k127_7200845_45 metallopeptidase activity - - - 0.000000009937 65.0
BYD3_k127_7200845_48 Domain of unknown function (DUF4440) - - - 0.0002057 53.0
BYD3_k127_7200845_49 Amidohydrolase family - - - 0.0002177 44.0
BYD3_k127_7200845_5 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006684 263.0
BYD3_k127_7200845_6 Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. The complementary strand guanine functions in substrate recognition. Required for DNA damage lesion repair in stationary-phase cells K03649 - 3.2.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000462 249.0
BYD3_k127_7200845_7 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001707 252.0
BYD3_k127_7200845_8 Clp protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001967 253.0
BYD3_k127_7200845_9 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.0000000000000000000000000000000000000000000000000000000000000000001205 233.0
BYD3_k127_7221059_0 cAMP biosynthetic process K01768,K02483 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003635 363.0
BYD3_k127_7221059_1 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008473 307.0
BYD3_k127_7221059_2 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001069 280.0
BYD3_k127_7221059_3 Belongs to the binding-protein-dependent transport system permease family K05832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003024 257.0
BYD3_k127_7221059_4 antisigma factor binding K04749,K04757 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000003173 213.0
BYD3_k127_7221059_5 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000001306 186.0
BYD3_k127_7293336_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 4.236e-211 666.0
BYD3_k127_7293336_1 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 579.0
BYD3_k127_7293336_2 4Fe-4S binding domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 380.0
BYD3_k127_7293336_3 ATP-dependent protease La (LON) substrate-binding domain K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000364 177.0
BYD3_k127_7293336_4 FAD linked oxidases, C-terminal domain K11472 - - 0.00000000000000000000000000000000000000008314 171.0
BYD3_k127_7293336_5 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000002638 156.0
BYD3_k127_7293336_6 Glycine cleavage T-protein C-terminal barrel domain K06980 - - 0.00000000000000000000000000002014 132.0
BYD3_k127_7319728_0 sulfite oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009221 494.0
BYD3_k127_7319728_1 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 429.0
BYD3_k127_7319728_10 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000002379 212.0
BYD3_k127_7319728_11 virion core protein, lumpy skin disease virus - - - 0.00000000000000000000000000000000000000000000000359 180.0
BYD3_k127_7319728_12 Peptidase S15 K06978 - - 0.0000000000000000000000000000000000000001648 160.0
BYD3_k127_7319728_13 - - - - 0.000000000000000000000000000000000000003623 159.0
BYD3_k127_7319728_14 - - - - 0.0000000000000000000000000000000001129 139.0
BYD3_k127_7319728_15 polysaccharide biosynthetic process - - - 0.00000000000000000000000000000000433 145.0
BYD3_k127_7319728_16 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000001004 142.0
BYD3_k127_7319728_17 - - - - 0.000000000000001313 83.0
BYD3_k127_7319728_2 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005343 384.0
BYD3_k127_7319728_3 Belongs to the serpin family K13963 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008356 305.0
BYD3_k127_7319728_4 isomerase activity K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009662 294.0
BYD3_k127_7319728_5 imidazolonepropionase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000474 279.0
BYD3_k127_7319728_6 NUDIX hydrolase K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000005687 238.0
BYD3_k127_7319728_7 HD domain K07023 - - 0.00000000000000000000000000000000000000000000000000000000000000000002961 237.0
BYD3_k127_7319728_8 phosphatidylcholine synthase activity K01004 - 2.7.8.24 0.000000000000000000000000000000000000000000000000000000000000000008771 237.0
BYD3_k127_7319728_9 L-lysine catabolic process to acetate K18013 - 2.3.1.247 0.000000000000000000000000000000000000000000000000000000000000001448 226.0
BYD3_k127_732173_0 Carboxypeptidase regulatory-like domain - - - 0.0 1036.0
BYD3_k127_732173_1 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 2.285e-237 767.0
BYD3_k127_732173_10 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000002884 149.0
BYD3_k127_732173_11 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000001102 157.0
BYD3_k127_732173_12 Cytochrome P460 - - - 0.00000000000000000000000001101 116.0
BYD3_k127_732173_13 Outer membrane protein beta-barrel domain - - - 0.000002352 59.0
BYD3_k127_732173_14 Domain of unknown function (DUF4340) - - - 0.00001912 56.0
BYD3_k127_732173_15 TonB-dependent receptor - - - 0.00008549 55.0
BYD3_k127_732173_2 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 445.0
BYD3_k127_732173_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 383.0
BYD3_k127_732173_4 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 327.0
BYD3_k127_732173_5 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005955 292.0
BYD3_k127_732173_6 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006387 276.0
BYD3_k127_732173_7 - K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008397 280.0
BYD3_k127_732173_8 ABC-type uncharacterized transport system - - - 0.000000000000000000000000000000000000000000000000000000001418 226.0
BYD3_k127_732173_9 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000000000000001505 167.0
BYD3_k127_7356308_0 Aldehyde dehydrogenase family K22187 - - 1.887e-262 814.0
BYD3_k127_7356308_1 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009625 592.0
BYD3_k127_7356308_10 RF-1 domain K15034 - - 0.0000000000000000000000000000000004522 135.0
BYD3_k127_7356308_11 Domain of unknown function (DUF4105) - - - 0.000000000000000000000000000000006457 144.0
BYD3_k127_7356308_12 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000004599 129.0
BYD3_k127_7356308_13 - - - - 0.0000000000000000003471 103.0
BYD3_k127_7356308_14 magnesium chelatase K07391 - - 0.00000001644 55.0
BYD3_k127_7356308_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 462.0
BYD3_k127_7356308_3 PFAM Phenazine biosynthesis PhzC PhzF protein K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 339.0
BYD3_k127_7356308_4 Homoserine dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 310.0
BYD3_k127_7356308_5 tRNA processing K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001419 269.0
BYD3_k127_7356308_6 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001384 268.0
BYD3_k127_7356308_7 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000000000000000000001286 245.0
BYD3_k127_7356308_8 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000003487 212.0
BYD3_k127_7356308_9 Protein of unknown function (DUF520) K09767 - - 0.000000000000000000000000000000000000000000000000000000001722 205.0
BYD3_k127_7359271_0 lysine 2,3-aminomutase activity K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009844 428.0
BYD3_k127_7359271_1 phosphorelay signal transduction system K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005736 381.0
BYD3_k127_7359271_2 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006792 317.0
BYD3_k127_7359271_3 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006692 324.0
BYD3_k127_7359271_4 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000000000000001451 159.0
BYD3_k127_7359271_6 transcriptional regulator, SARP family - - - 0.0000006031 61.0
BYD3_k127_7382709_0 PFAM Sodium sulphate symporter K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 458.0
BYD3_k127_7382709_1 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008381 428.0
BYD3_k127_7382709_2 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 323.0
BYD3_k127_7382709_3 conserved protein (DUF2183) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 303.0
BYD3_k127_7382709_4 Maltose acetyltransferase K00661 - 2.3.1.79 0.000000000000000000000000000000000000000000085 166.0
BYD3_k127_7382709_5 PFAM CheW domain protein K03408 - - 0.0000000000000000000000000001193 123.0
BYD3_k127_7382709_6 cheY-homologous receiver domain K03413 - - 0.00000000000000000000001732 104.0
BYD3_k127_7382709_7 cheY-homologous receiver domain K03413 - - 0.000000000000002638 81.0
BYD3_k127_7458289_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009596 451.0
BYD3_k127_7458289_1 Transglycosylase SLT domain K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 313.0
BYD3_k127_7458289_2 MgtC family K07507 - - 0.000000000000000000000000000000000003542 142.0
BYD3_k127_7458289_3 Calcineurin-like phosphoesterase - - - 0.000000000000000000003011 99.0
BYD3_k127_7465073_0 D-aminoacylase domain protein K01465,K06015 - 3.5.1.81,3.5.2.3 3.627e-237 745.0
BYD3_k127_7465073_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 349.0
BYD3_k127_7465073_10 STAS domain K04749 - - 0.00000000000000000000000000000000000003714 148.0
BYD3_k127_7465073_11 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000000000001826 99.0
BYD3_k127_7465073_12 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000001657 84.0
BYD3_k127_7465073_13 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000002741 71.0
BYD3_k127_7465073_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 337.0
BYD3_k127_7465073_3 Amidinotransferase K01478 - 3.5.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000495 268.0
BYD3_k127_7465073_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001371 244.0
BYD3_k127_7465073_5 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000002811 227.0
BYD3_k127_7465073_6 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.000000000000000000000000000000000000000000000000000000000008176 236.0
BYD3_k127_7465073_7 EXOIII K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000128 202.0
BYD3_k127_7465073_8 Phosphate acetyl/butaryl transferase K00625 - 2.3.1.8 0.00000000000000000000000000000000000000004035 154.0
BYD3_k127_7465073_9 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000002971 149.0
BYD3_k127_747291_0 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008585 472.0
BYD3_k127_747291_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 406.0
BYD3_k127_747291_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 394.0
BYD3_k127_747291_3 imidazolonepropionase activity K01487 - 3.5.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007045 327.0
BYD3_k127_747291_4 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000008714 175.0
BYD3_k127_747291_5 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.000000000000000000000000000000000000000000002283 167.0
BYD3_k127_747291_6 Molybdopterin converting factor subunit K03635,K21142 - 2.8.1.12 0.000000000000000000000000000000000006218 141.0
BYD3_k127_747291_7 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.000000000000000000000001604 108.0
BYD3_k127_747291_8 ThiS family K03636 - - 0.00000000000000005094 83.0
BYD3_k127_747291_9 Preprotein translocase SecG subunit K03075 - - 0.000000000000005481 87.0
BYD3_k127_7475164_0 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 297.0
BYD3_k127_7475164_1 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001691 266.0
BYD3_k127_7475164_2 ABC transporter K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000001021 228.0
BYD3_k127_7475164_3 NIF3 (NGG1p interacting factor 3) - - - 0.00000000000000000000000000000000000000000000000000000000000005107 234.0
BYD3_k127_7475164_4 Cellulose biosynthesis protein BcsQ K03496 - - 0.00000000000000000000000000000000000000000000007906 179.0
BYD3_k127_7475164_5 PFAM Peptidase family M23 - - - 0.000000000000000000000001596 115.0
BYD3_k127_7475164_6 Polymer-forming cytoskeletal - - - 0.000000000009138 73.0
BYD3_k127_7492231_0 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 375.0
BYD3_k127_7492231_1 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 351.0
BYD3_k127_7492231_2 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008666 321.0
BYD3_k127_7492231_3 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004574 305.0
BYD3_k127_7492231_4 Glycosyl hydrolase family 3 N terminal domain K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 309.0
BYD3_k127_7492231_5 PFAM Major Facilitator Superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000827 275.0
BYD3_k127_7492231_6 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000001376 120.0
BYD3_k127_7492231_7 peptidyl-tyrosine sulfation - - - 0.000000000001284 83.0
BYD3_k127_7495871_0 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 541.0
BYD3_k127_7495871_1 PFAM regulatory protein LuxR - - - 0.0000000000000000000000000000000000000000000000000000000000000000005892 241.0
BYD3_k127_7495871_2 Alpha beta hydrolase - - - 0.00000000000283 78.0
BYD3_k127_7495871_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000007713 60.0
BYD3_k127_750024_0 PFAM Alcohol dehydrogenase - - - 3.042e-199 628.0
BYD3_k127_750024_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 319.0
BYD3_k127_750024_2 cyclase dehydrase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 304.0
BYD3_k127_750024_3 Domain of unknown function (DUF4153) - - - 0.00000000000000000000000000000000000000000000000000000000000000008857 244.0
BYD3_k127_750024_4 - K04096 - - 0.000000000000000000000000000000000000000000000000002677 191.0
BYD3_k127_750024_5 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000000983 111.0
BYD3_k127_7521280_0 B3/4 domain K01890 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 623.0
BYD3_k127_7521280_1 Endoribonuclease that initiates mRNA decay K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007457 607.0
BYD3_k127_7521280_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 353.0
BYD3_k127_7521280_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 324.0
BYD3_k127_7521280_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006435 310.0
BYD3_k127_7521280_5 Polyprenyl synthetase K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000005732 247.0
BYD3_k127_7521280_6 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.00000000000000000000000000000000000000000000000003648 182.0
BYD3_k127_7521280_7 - - - - 0.000001018 59.0
BYD3_k127_7521280_8 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00003267 56.0
BYD3_k127_7521280_9 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0001177 51.0
BYD3_k127_7593167_0 Thiamine pyrophosphate enzyme, central domain K03336 - 3.7.1.22 1.292e-274 860.0
BYD3_k127_7593167_1 cobalamin-transporting ATPase activity K02014 - - 9.661e-268 862.0
BYD3_k127_7593167_10 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 344.0
BYD3_k127_7593167_11 Deoxyribose-phosphate aldolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 345.0
BYD3_k127_7593167_12 KduI/IolB family K03337 - 5.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 334.0
BYD3_k127_7593167_2 ABC transporter K17215 - - 8.436e-218 702.0
BYD3_k127_7593167_3 Belongs to the binding-protein-dependent transport system permease family K17214 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015749,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0034219,GO:0044425,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 467.0
BYD3_k127_7593167_4 ABC-type sugar transport system periplasmic component K10439,K17213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 458.0
BYD3_k127_7593167_5 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000034 376.0
BYD3_k127_7593167_6 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) K01083 - 3.1.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007191 375.0
BYD3_k127_7593167_7 PFAM PfkB domain protein K03338 - 2.7.1.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 378.0
BYD3_k127_7593167_8 mannose-ethanolamine phosphotransferase activity K01077 GO:0003674,GO:0003824,GO:0004035,GO:0004346,GO:0005488,GO:0005575,GO:0005623,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008877,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046872,GO:0046914,GO:0050308,GO:0050309,GO:0098519 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006643 368.0
BYD3_k127_7593167_9 Xylose isomerase-like TIM barrel K06606 - 5.3.99.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008275 344.0
BYD3_k127_7612341_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 596.0
BYD3_k127_7612341_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000008209 220.0
BYD3_k127_7612341_2 Septum formation initiator K05589 - - 0.0000733 53.0
BYD3_k127_7612341_3 Two component regulator propeller - - - 0.00008131 55.0
BYD3_k127_770624_0 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 376.0
BYD3_k127_770624_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 376.0
BYD3_k127_770624_2 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 346.0
BYD3_k127_770624_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009935 306.0
BYD3_k127_770624_4 PFAM peptidase K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004356 291.0
BYD3_k127_770624_5 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000001165 235.0
BYD3_k127_770624_6 Belongs to the DapB family K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000003508 203.0
BYD3_k127_770624_7 domain, Protein - - - 0.0000003297 63.0
BYD3_k127_7715608_0 gluconolactonase activity K01053 - 3.1.1.17 1.058e-222 710.0
BYD3_k127_7715608_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 1.022e-203 644.0
BYD3_k127_7715608_10 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002481 282.0
BYD3_k127_7715608_11 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000192 227.0
BYD3_k127_7715608_12 PFAM Sulfate transporter antisigma-factor antagonist STAS K17762 - - 0.00000000000000000000000000000000000000000000000004984 181.0
BYD3_k127_7715608_13 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K17752 - 2.7.11.1 0.000000000000000000000000000000000000000000000009697 177.0
BYD3_k127_7715608_14 translation initiation inhibitor, yjgF family K04782 - 4.2.99.21 0.00000000000000000000000000000000000000000000003355 175.0
BYD3_k127_7715608_15 Export-related chaperone CsaA K06878 - - 0.000000000000000000000000000000000000000000001227 173.0
BYD3_k127_7715608_16 Cupin 2, conserved barrel domain protein K11477 - - 0.00000000000000000000000000000000001929 141.0
BYD3_k127_7715608_17 Cupin 2, conserved barrel domain protein K11477 - - 0.0000000000000000000000000005049 122.0
BYD3_k127_7715608_18 DNA-binding transcription factor activity - - - 0.0000000000000000000000000005924 119.0
BYD3_k127_7715608_2 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 450.0
BYD3_k127_7715608_20 Peptidase family M23 - - - 0.00000003567 64.0
BYD3_k127_7715608_21 - - - - 0.0000003751 61.0
BYD3_k127_7715608_23 light absorption - - - 0.000008955 54.0
BYD3_k127_7715608_24 - - - - 0.0001681 52.0
BYD3_k127_7715608_3 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 404.0
BYD3_k127_7715608_4 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007501 421.0
BYD3_k127_7715608_5 Oligopeptide/dipeptide transporter, C-terminal region K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 402.0
BYD3_k127_7715608_6 RsbT co-antagonist protein rsbRD N-terminal domain K17763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 361.0
BYD3_k127_7715608_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 365.0
BYD3_k127_7715608_8 D-aminopeptidase K16203 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 300.0
BYD3_k127_7715608_9 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007331 289.0
BYD3_k127_7735483_0 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000002169 185.0
BYD3_k127_7735483_1 - - - - 0.0000000000000000000000000000000000000000000000003637 185.0
BYD3_k127_7735483_2 YCII-related domain - - - 0.0000000000000000000000000000000000000000002257 169.0
BYD3_k127_7735483_3 - - - - 0.00000000000000000000000000000000002616 147.0
BYD3_k127_7735483_4 YCII-related domain - - - 0.0000000000000000000000000000001213 128.0
BYD3_k127_7735483_5 Domain of unknown function (DUF4394) - - - 0.00000000000000000241 96.0
BYD3_k127_7735483_7 MobA-like NTP transferase domain - - - 0.000000000000007257 78.0
BYD3_k127_7757659_0 Protein of unknown function (DUF2867) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006149 595.0
BYD3_k127_7757659_1 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 361.0
BYD3_k127_7757659_2 Deoxyribodipyrimidine photo-lyase K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 319.0
BYD3_k127_7757659_3 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001965 265.0
BYD3_k127_7757659_4 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K01647,K22491 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000009068 199.0
BYD3_k127_7757659_5 Domain of unknown function (DUF378) K09779 - - 0.00000006736 56.0
BYD3_k127_7822296_0 HypF finger K04656 - - 7.29e-288 906.0
BYD3_k127_7822296_1 D-glycero-D-manno-heptose 7-phosphate metabolic process K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 537.0
BYD3_k127_7822296_10 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000005289 66.0
BYD3_k127_7822296_2 AIR synthase related protein, C-terminal domain K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008402 492.0
BYD3_k127_7822296_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 450.0
BYD3_k127_7822296_4 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 314.0
BYD3_k127_7822296_5 High-affinity nickel-transport protein K07241 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003292 273.0
BYD3_k127_7822296_6 Hydrogenase/urease nickel incorporation, metallochaperone, hypA K04651 - - 0.000000000000000000000000000001874 133.0
BYD3_k127_7822296_7 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000000000000000000001316 114.0
BYD3_k127_7822296_8 Hydrogenase formation hypA family K04654 - - 0.000000000000000000000008031 100.0
BYD3_k127_7822296_9 - - - - 0.000000002799 60.0
BYD3_k127_8096681_0 efflux transmembrane transporter activity - - - 1.177e-215 694.0
BYD3_k127_8096681_1 efflux transmembrane transporter activity - - - 2.351e-215 698.0
BYD3_k127_8096681_10 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 323.0
BYD3_k127_8096681_11 FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 307.0
BYD3_k127_8096681_12 - - - - 0.00000000000000000000000000000000000000000000000000000008655 206.0
BYD3_k127_8096681_13 positive regulation of acetylcholine metabolic process K06910 - - 0.00000000000000000000000000000000000000000000000000002643 192.0
BYD3_k127_8096681_14 BON domain - - - 0.000000000000000000000000000000000000000000000002514 185.0
BYD3_k127_8096681_15 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000001296 196.0
BYD3_k127_8096681_16 Exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.0000000000000000000000000000000000000000000000376 172.0
BYD3_k127_8096681_17 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0005488,GO:0005507,GO:0005575,GO:0005576,GO:0005615,GO:0005623,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008270,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0030288,GO:0030313,GO:0031975,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044421,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1 0.000000000000000000000000000000000000000000008194 168.0
BYD3_k127_8096681_18 response to heat K07090 - - 0.000000000000000000000000000202 118.0
BYD3_k127_8096681_2 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 623.0
BYD3_k127_8096681_3 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004975 633.0
BYD3_k127_8096681_4 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006526 587.0
BYD3_k127_8096681_5 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 553.0
BYD3_k127_8096681_6 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009938 456.0
BYD3_k127_8096681_7 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007566 447.0
BYD3_k127_8096681_8 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006999 374.0
BYD3_k127_8096681_9 Fungal family of unknown function (DUF1776) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009507 347.0
BYD3_k127_8125156_0 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 458.0
BYD3_k127_8125156_1 PFAM Glycoside hydrolase, family 38 K01191,K15524 - 3.2.1.170,3.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007528 366.0
BYD3_k127_8125156_2 dihydroorotate dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 330.0
BYD3_k127_8125156_3 carboxylic acid catabolic process K02549 GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.2.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000006595 271.0
BYD3_k127_8125156_4 Dihydrodipicolinate synthetase family - - - 0.000000000000000000000000004045 114.0
BYD3_k127_8133348_0 PglZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 597.0
BYD3_k127_8133348_1 ABC transporter transmembrane region K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005855 488.0
BYD3_k127_8133348_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000007619 180.0
BYD3_k127_8133348_3 Protein conserved in bacteria K06320 - - 0.000000000000000000000000009719 122.0
BYD3_k127_8133348_4 transferase activity, transferring glycosyl groups K00754 - - 0.00000003094 61.0
BYD3_k127_8146276_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.246e-252 799.0
BYD3_k127_8146276_1 Fructose-bisphosphate aldolase class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 563.0
BYD3_k127_8146276_10 Roadblock/LC7 domain - - - 0.000000000000000000000000000000000000000000000000000003936 199.0
BYD3_k127_8146276_11 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000002932 190.0
BYD3_k127_8146276_12 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000007487 180.0
BYD3_k127_8146276_13 PFAM Amidohydrolase 3 - - - 0.0000000000000000000000000000000000005935 145.0
BYD3_k127_8146276_14 PFAM membrane protein of K08972 - - 0.000000000000000000000000007163 117.0
BYD3_k127_8146276_15 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000001164 124.0
BYD3_k127_8146276_16 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000003227 89.0
BYD3_k127_8146276_17 - - - - 0.000000000000423 75.0
BYD3_k127_8146276_18 membrane K07058 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000008377 61.0
BYD3_k127_8146276_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 509.0
BYD3_k127_8146276_3 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006513 488.0
BYD3_k127_8146276_4 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 443.0
BYD3_k127_8146276_5 Phosphoglucose isomerase K01810 - 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 424.0
BYD3_k127_8146276_6 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 376.0
BYD3_k127_8146276_7 Competence-damaged protein K03742 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 379.0
BYD3_k127_8146276_8 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009621 328.0
BYD3_k127_8146276_9 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007032 256.0
BYD3_k127_8147165_0 ATP-dependent helicase K03579 - 3.6.4.13 1.573e-295 930.0
BYD3_k127_8147165_1 PFAM metal-dependent phosphohydrolase, HD sub domain - GO:0003674,GO:0003824,GO:0004112,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008081,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009187,GO:0009214,GO:0009987,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 434.0
BYD3_k127_8147165_10 PFAM binding-protein-dependent transport systems inner membrane component K02025,K10237 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001666 284.0
BYD3_k127_8147165_11 PFAM extracellular solute-binding protein family 1 K02027,K10236 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006767 287.0
BYD3_k127_8147165_12 binding-protein-dependent transport systems inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001366 286.0
BYD3_k127_8147165_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001559 278.0
BYD3_k127_8147165_14 PFAM Methionine sulfoxide reductase B K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000001525 246.0
BYD3_k127_8147165_15 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000001338 193.0
BYD3_k127_8147165_16 - - - - 0.00000000000000000000000000000000000000000000001708 194.0
BYD3_k127_8147165_17 response to acidic pH K08996 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009268,GO:0009628,GO:0010447,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.0000000000000000000000000000000000000001593 156.0
BYD3_k127_8147165_18 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.000000000000000000004361 108.0
BYD3_k127_8147165_19 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.000000000005079 68.0
BYD3_k127_8147165_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 408.0
BYD3_k127_8147165_20 - - - - 0.000003198 55.0
BYD3_k127_8147165_21 - - - - 0.0003351 51.0
BYD3_k127_8147165_22 - - - - 0.0005947 51.0
BYD3_k127_8147165_3 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009819 398.0
BYD3_k127_8147165_4 ABC transporter K10112,K11072,K17324 - 3.6.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000599 362.0
BYD3_k127_8147165_5 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 366.0
BYD3_k127_8147165_6 short chain dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 333.0
BYD3_k127_8147165_7 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007264 350.0
BYD3_k127_8147165_8 aminopeptidase activity K19689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004021 315.0
BYD3_k127_8147165_9 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000625 306.0
BYD3_k127_8204853_0 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001027 280.0
BYD3_k127_8204853_2 Major facilitator Superfamily K03762 - - 0.00000000000000000000000006625 113.0
BYD3_k127_8204853_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000001166 123.0
BYD3_k127_8204853_4 - - - - 0.00000000002549 68.0
BYD3_k127_8238829_0 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 591.0
BYD3_k127_8238829_1 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 314.0
BYD3_k127_8238829_2 metallophosphoesterase K07096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007429 308.0
BYD3_k127_8238829_3 Nucleotidyl transferase of unknown function (DUF2204) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 299.0
BYD3_k127_8238829_4 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000132 198.0
BYD3_k127_8238829_5 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000006969 196.0
BYD3_k127_8238829_6 metal-dependent protease of the PAD1 JAB1 superfamily - - - 0.000000000000000000000000000002984 134.0
BYD3_k127_8448946_0 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 3.065e-269 848.0
BYD3_k127_8448946_1 C-terminus of AA_permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005106 601.0
BYD3_k127_8448946_2 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009026 557.0
BYD3_k127_8448946_3 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 383.0
BYD3_k127_8448946_4 glutamate decarboxylase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 369.0
BYD3_k127_8448946_5 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000643 327.0
BYD3_k127_8448946_6 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001259 294.0
BYD3_k127_8448946_7 DSBA-like thioredoxin domain K21990 - - 0.0000000000000000000000000000000000000000000001352 193.0
BYD3_k127_8448946_8 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000001172 136.0
BYD3_k127_8450990_0 Oxidoreductase family, C-terminal alpha/beta domain K13020 - 1.1.1.335 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 587.0
BYD3_k127_8450990_1 MgsA AAA+ ATPase C terminal K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000739 595.0
BYD3_k127_8450990_10 Late embryogenesis abundant protein - - - 0.00000000000000008976 90.0
BYD3_k127_8450990_2 DegT/DnrJ/EryC1/StrS aminotransferase family K13010 - 2.6.1.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 499.0
BYD3_k127_8450990_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 461.0
BYD3_k127_8450990_4 Male sterility protein K01710,K08678 - 4.1.1.35,4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 387.0
BYD3_k127_8450990_5 PFAM N-acetylneuraminic acid synthase, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 381.0
BYD3_k127_8450990_6 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007917 335.0
BYD3_k127_8450990_7 transporter K07238,K11021,K16267 - - 0.000000000000000000000000000000000000000000000000000004129 212.0
BYD3_k127_8450990_8 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000005848 185.0
BYD3_k127_8450990_9 Phosphoenolpyruvate phosphomutase K01637 - 4.1.3.1 0.0000000000000000000000000000000000000005553 164.0
BYD3_k127_8458790_0 4Fe-4S dicluster domain K00184 - - 2.359e-247 799.0
BYD3_k127_8458790_1 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 555.0
BYD3_k127_8458790_10 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000004228 128.0
BYD3_k127_8458790_11 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000005964 81.0
BYD3_k127_8458790_12 - - - - 0.0002432 50.0
BYD3_k127_8458790_2 Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 537.0
BYD3_k127_8458790_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 317.0
BYD3_k127_8458790_4 IMS family HHH motif K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000005832 269.0
BYD3_k127_8458790_5 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000006945 245.0
BYD3_k127_8458790_6 Pfam Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000001544 228.0
BYD3_k127_8458790_7 Ferritin-like domain K02217 - 1.16.3.2 0.000000000000000000000000000000000000000000000000116 186.0
BYD3_k127_8458790_8 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K01883,K02533,K08281,K15396 GO:0001510,GO:0002128,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.200,3.5.1.19,6.1.1.16 0.000000000000000000000000000000000000000000001585 187.0
BYD3_k127_8458790_9 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000001451 140.0
BYD3_k127_8459619_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 4.01e-231 732.0
BYD3_k127_8459619_1 7TM receptor with intracellular HD hydrolase K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 465.0
BYD3_k127_8459619_2 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004366 424.0
BYD3_k127_8459619_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000905 237.0
BYD3_k127_8459619_4 phosphoenolpyruvate-dependent sugar phosphotransferase system K02768,K02769,K02770,K02806 - 2.7.1.202 0.00000000000000000000000003688 117.0
BYD3_k127_8459619_5 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0006697 45.0
BYD3_k127_8463424_0 membrane organization - - - 1.126e-204 666.0
BYD3_k127_8463424_1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 404.0
BYD3_k127_8463424_2 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000007116 203.0
BYD3_k127_8463424_3 SdiA-regulated - - - 0.0000000000000000000000000000000000000001241 166.0
BYD3_k127_8463424_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000004222 155.0
BYD3_k127_8463424_5 Belongs to the 'phage' integrase family - - - 0.0008835 45.0
BYD3_k127_8472583_0 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 472.0
BYD3_k127_8472583_1 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 443.0
BYD3_k127_8472583_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 388.0
BYD3_k127_8472583_3 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000146 297.0
BYD3_k127_8472583_4 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005347 284.0
BYD3_k127_8472583_5 lipoprotein localization to outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000003814 240.0
BYD3_k127_8472583_6 Putative phosphatase (DUF442) - - - 0.00000000000000003662 87.0
BYD3_k127_8472583_7 Protein involved in meta-pathway of phenol degradation - - - 0.000000000002177 70.0
BYD3_k127_8472583_8 cell adhesion involved in biofilm formation - - - 0.00000004699 66.0
BYD3_k127_8480972_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.403e-240 755.0
BYD3_k127_8480972_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00520 - 1.16.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 591.0
BYD3_k127_8480972_10 PFAM Fe-S metabolism associated K02426 - - 0.00000000000000000000000000000000003447 142.0
BYD3_k127_8480972_11 Histidine-specific methyltransferase, SAM-dependent - - - 0.0000001182 58.0
BYD3_k127_8480972_2 DinB superfamily K18912 - 1.14.99.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 481.0
BYD3_k127_8480972_3 Protein of unknown function (DUF1015) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 449.0
BYD3_k127_8480972_4 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006926 437.0
BYD3_k127_8480972_5 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006818 404.0
BYD3_k127_8480972_6 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 384.0
BYD3_k127_8480972_7 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 367.0
BYD3_k127_8480972_8 Glycine betaine K05845 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006042 372.0
BYD3_k127_8480972_9 Psort location CytoplasmicMembrane, score K05847 - - 0.000000000000000000000000000000000000000000000000000001792 197.0
BYD3_k127_8483480_0 Cupredoxin-like domain K00376 - 1.7.2.4 1.433e-260 827.0
BYD3_k127_8483480_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 1.186e-220 693.0
BYD3_k127_8483480_10 PFAM blue (type 1) copper domain protein K00368 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1 0.0000000000000000000000000000000000000000002078 164.0
BYD3_k127_8483480_11 lipoprotein involved in nitrous oxide reduction K19342 - - 0.0000000000000000000000000000000001536 143.0
BYD3_k127_8483480_12 ABC-2 family transporter protein K19341 - - 0.0000000000000000000000000000001136 138.0
BYD3_k127_8483480_13 2 iron, 2 sulfur cluster binding K13643 - - 0.000000000000000000000000000006486 124.0
BYD3_k127_8483480_14 usher protein - - - 0.00000000000000001977 87.0
BYD3_k127_8483480_15 lipoprotein involved in nitrous oxide reduction K19342 - - 0.000000006648 65.0
BYD3_k127_8483480_16 COG2846 Regulator of cell morphogenesis and NO signaling K07322 - - 0.00002396 53.0
BYD3_k127_8483480_2 Transport of potassium into the cell K03549 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 508.0
BYD3_k127_8483480_3 Alginate export - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 402.0
BYD3_k127_8483480_4 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000471 389.0
BYD3_k127_8483480_5 Transcriptional regulatory protein, C terminal K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 314.0
BYD3_k127_8483480_6 Parallel beta-helix repeat K07218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000604 286.0
BYD3_k127_8483480_7 cytochrome c nitrite reductase K15876 - - 0.000000000000000000000000000000000000000000000000000003929 198.0
BYD3_k127_8483480_8 Cytochrome C and Quinol oxidase polypeptide I - - - 0.00000000000000000000000000000000000000000000000001085 188.0
BYD3_k127_8483480_9 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000005894 186.0
BYD3_k127_8495672_0 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009457 306.0
BYD3_k127_8495672_1 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001614 283.0
BYD3_k127_8495672_2 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000002774 228.0
BYD3_k127_8495672_3 PQQ-like domain K00114 - 1.1.2.8 0.000000000000000000000000000000000000000000000000000000000001379 217.0
BYD3_k127_8495672_4 formate transmembrane transporter activity K06212,K21990,K21993 - - 0.00000000000000000000000000000000000000000000000002425 188.0
BYD3_k127_8495672_5 AI-2E family transporter - - - 0.0000001217 55.0
BYD3_k127_8499520_0 Required for chromosome condensation and partitioning K03529 - - 4.85e-279 897.0
BYD3_k127_8499520_1 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000005076 119.0
BYD3_k127_8499520_2 Sporulation related domain - - - 0.00000000000000000000005612 115.0
BYD3_k127_8500196_0 DEAD/H associated K03724 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 569.0
BYD3_k127_8500196_1 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 543.0
BYD3_k127_8500196_10 Calcineurin-like phosphoesterase K06953 - - 0.00000000000000000000000000000000000000000000000000000000000002234 239.0
BYD3_k127_8500196_11 PFAM FAD dependent oxidoreductase K03153 - 1.4.3.19 0.000000000000000000000000000000000000000000000000000000000003104 222.0
BYD3_k127_8500196_12 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000000000000000000001462 231.0
BYD3_k127_8500196_13 - - - - 0.00000000000000000000000000000000000000000000000000000001409 207.0
BYD3_k127_8500196_14 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000003789 205.0
BYD3_k127_8500196_16 Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000000005909 191.0
BYD3_k127_8500196_17 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000001554 175.0
BYD3_k127_8500196_18 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000133 174.0
BYD3_k127_8500196_19 FAD binding domain K10960,K21401 - 1.3.1.111,1.3.1.83,1.3.99.38 0.00000000000000000000000000000000000000005477 168.0
BYD3_k127_8500196_2 POT family K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 532.0
BYD3_k127_8500196_20 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000001017 160.0
BYD3_k127_8500196_22 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000153 143.0
BYD3_k127_8500196_23 Anti-sigma-K factor rskA - - - 0.0000000000000000007444 100.0
BYD3_k127_8500196_24 - - - - 0.0000000000000000008554 96.0
BYD3_k127_8500196_25 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000007848 97.0
BYD3_k127_8500196_26 - - - - 0.0000000002053 68.0
BYD3_k127_8500196_27 HIT domain - - - 0.0000000003465 68.0
BYD3_k127_8500196_28 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000002801 60.0
BYD3_k127_8500196_29 - - - - 0.00004167 49.0
BYD3_k127_8500196_3 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 390.0
BYD3_k127_8500196_4 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 365.0
BYD3_k127_8500196_5 histidine kinase A domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000065 321.0
BYD3_k127_8500196_6 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002763 299.0
BYD3_k127_8500196_7 Family of unknown function (DUF1028) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002091 283.0
BYD3_k127_8500196_8 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001388 254.0
BYD3_k127_8500196_9 Glycosyl transferase family 2 K08301 - - 0.0000000000000000000000000000000000000000000000000000000000000201 223.0
BYD3_k127_8573900_0 Conserved region in glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 1920.0
BYD3_k127_8573900_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008741 512.0
BYD3_k127_8573900_2 Bacterial regulatory proteins, tetR family - - - 0.0006651 43.0
BYD3_k127_8608371_0 repeat protein - - - 1.869e-198 650.0
BYD3_k127_8608371_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 578.0
BYD3_k127_8608371_2 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000002604 268.0
BYD3_k127_8773003_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K13926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 385.0
BYD3_k127_8773003_1 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 342.0
BYD3_k127_8773003_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006102 328.0
BYD3_k127_8773003_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004212 279.0
BYD3_k127_8773003_4 PFAM secretion protein HlyD family protein K01993,K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000006921 258.0
BYD3_k127_8773003_5 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000004616 249.0
BYD3_k127_8773003_6 regulation of single-species biofilm formation K13572,K13573 - - 0.000000000000000000000000000000000000000000000000000000002479 212.0
BYD3_k127_8773003_7 regulation of single-species biofilm formation K13572,K13573 - - 0.0000000000000000000000000000000000000000000000000626 197.0
BYD3_k127_8773003_8 transcriptional regulator K09017 - - 0.00000000000000000000000000000000000000000002752 169.0
BYD3_k127_8786551_0 AAA ATPase domain - - - 6.374e-296 983.0
BYD3_k127_8786551_1 PFAM Dynamin family protein - - - 6.536e-198 633.0
BYD3_k127_8786551_10 -O-antigen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005175 356.0
BYD3_k127_8786551_11 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 320.0
BYD3_k127_8786551_12 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 305.0
BYD3_k127_8786551_13 Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine K18911 - 2.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003095 283.0
BYD3_k127_8786551_14 integral membrane protein TIGR02587 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002749 288.0
BYD3_k127_8786551_15 Imidazolonepropionase and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001959 283.0
BYD3_k127_8786551_16 Sigma-70, region 4 K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000005921 226.0
BYD3_k127_8786551_17 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000001491 210.0
BYD3_k127_8786551_18 Glutamate-cysteine ligase family 2(GCS2) K01919 - 6.3.2.2 0.000000000000000000000000000000000000000000000000000524 208.0
BYD3_k127_8786551_19 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000005267 170.0
BYD3_k127_8786551_2 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 555.0
BYD3_k127_8786551_20 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000003999 136.0
BYD3_k127_8786551_21 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 - - 0.0000000000000000000000000009407 130.0
BYD3_k127_8786551_23 - - - - 0.0000000000000000000000009157 109.0
BYD3_k127_8786551_24 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000002258 109.0
BYD3_k127_8786551_25 Belongs to the CinA family - - - 0.000000000000000000001474 106.0
BYD3_k127_8786551_26 Heat induced stress protein YflT - - - 0.000000000000000000001559 110.0
BYD3_k127_8786551_28 PFAM Response regulator receiver domain, Bacterial regulatory proteins, luxR family - - - 0.0000000000000000001587 97.0
BYD3_k127_8786551_29 signal transduction histidine kinase K13587 - 2.7.13.3 0.0000000000000000009509 93.0
BYD3_k127_8786551_3 Bacterial transcriptional activator domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 475.0
BYD3_k127_8786551_31 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.000000000001013 78.0
BYD3_k127_8786551_32 - - - - 0.0000004443 56.0
BYD3_k127_8786551_4 cobalamin-transporting ATPase activity K02014,K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 457.0
BYD3_k127_8786551_5 PFAM RNA polymerase sigma factor 54, interaction - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 479.0
BYD3_k127_8786551_6 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 403.0
BYD3_k127_8786551_7 CAAX prenyl protease N-terminal, five membrane helices - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006689 398.0
BYD3_k127_8786551_8 protein catabolic process K03420,K13525,K17681 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 371.0
BYD3_k127_8786551_9 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines K01476,K01480 GO:0003674,GO:0003824,GO:0004053,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 3.5.3.1,3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824 346.0
BYD3_k127_8797506_0 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 1.914e-259 813.0
BYD3_k127_8797506_1 Insulinase (Peptidase family M16) K07263 - - 9.781e-206 670.0
BYD3_k127_8797506_10 CcmB protein K02194 - - 0.00000000000000000000000000000000000000000000000000000000003741 214.0
BYD3_k127_8797506_11 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000004643 174.0
BYD3_k127_8797506_12 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000003207 170.0
BYD3_k127_8797506_13 PFAM ABC transporter related K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000007935 166.0
BYD3_k127_8797506_14 Methyltransferase domain - - - 0.0000000000000000000000000000000000000001607 166.0
BYD3_k127_8797506_15 May be involved in the transport of PQQ or its precursor to the periplasm K06136 - - 0.00000000000000000000000000000000000004853 146.0
BYD3_k127_8797506_16 Integral membrane protein DUF92 - - - 0.0000000000000000000000000000000000001852 153.0
BYD3_k127_8797506_17 Flavin reductase like domain - - - 0.000000000000000000000000000000000001236 149.0
BYD3_k127_8797506_18 Utp--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000001729 118.0
BYD3_k127_8797506_19 OsmC-like protein K07397 - - 0.000000000000000000001437 106.0
BYD3_k127_8797506_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 563.0
BYD3_k127_8797506_20 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07669,K07672 - - 0.000000000000000000003841 97.0
BYD3_k127_8797506_22 - - - - 0.00000000000000001193 85.0
BYD3_k127_8797506_23 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000005034 85.0
BYD3_k127_8797506_24 antisigma factor binding K04749,K06378 - - 0.000004442 53.0
BYD3_k127_8797506_3 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02481,K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 584.0
BYD3_k127_8797506_4 Histidine kinase K01768,K02482,K02660,K03406,K05874,K07315,K10819,K11525,K11617 - 2.7.13.3,3.1.3.3,4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 510.0
BYD3_k127_8797506_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 457.0
BYD3_k127_8797506_6 Glucose inhibited division protein A K21401 - 1.3.99.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 320.0
BYD3_k127_8797506_7 Cytochrome C assembly protein K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009311 250.0
BYD3_k127_8797506_8 water channel activity K02440,K06188,K09874 - - 0.000000000000000000000000000000000000000000000000000000000000000001058 235.0
BYD3_k127_8797506_9 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000001509 225.0
BYD3_k127_8799801_0 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004047 266.0
BYD3_k127_8799801_1 dihydropteroate synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000008717 227.0
BYD3_k127_8799801_2 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000002555 231.0
BYD3_k127_8799801_3 Pterin 4 alpha carbinolamine dehydratase K01724,K11991 - 3.5.4.33,4.2.1.96 0.0000000000000000000000000000000000000000001012 172.0
BYD3_k127_8799801_4 lyase activity K01633,K09733 - 1.13.11.81,4.1.2.25,4.2.3.153,5.1.99.8 0.0000000000000000007268 96.0
BYD3_k127_8804726_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 3.177e-301 942.0
BYD3_k127_8804726_1 ACT domain K12524 - 1.1.1.3,2.7.2.4 4.095e-281 888.0
BYD3_k127_8804726_10 homoserine kinase K00872 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000484 215.0
BYD3_k127_8804726_11 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.000000000000000000000000000000006903 134.0
BYD3_k127_8804726_12 SWI complex, BAF60b domains - - - 0.00000000000000000000000000000000882 134.0
BYD3_k127_8804726_13 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000003681 85.0
BYD3_k127_8804726_14 Protein involved in outer membrane biogenesis - - - 0.0000000000002069 83.0
BYD3_k127_8804726_15 cytochrome - - - 0.00000000009927 67.0
BYD3_k127_8804726_2 COG0488 ATPase components of ABC transporters with duplicated ATPase domains - - - 8.963e-252 788.0
BYD3_k127_8804726_3 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 600.0
BYD3_k127_8804726_4 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 535.0
BYD3_k127_8804726_5 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005792 506.0
BYD3_k127_8804726_6 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 463.0
BYD3_k127_8804726_7 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005324 467.0
BYD3_k127_8804726_8 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 442.0
BYD3_k127_8804726_9 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 342.0
BYD3_k127_8809653_0 lysine 2,3-aminomutase activity K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 433.0
BYD3_k127_8809653_1 ATP-grasp domain K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 338.0
BYD3_k127_8809653_2 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000001483 201.0
BYD3_k127_8809653_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000009518 126.0
BYD3_k127_8881168_0 transmembrane transporter activity K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 485.0
BYD3_k127_8881168_1 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 503.0
BYD3_k127_8881168_2 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006192 483.0
BYD3_k127_8881168_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005983 383.0
BYD3_k127_8881168_4 lipoprotein transporter activity K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 338.0
BYD3_k127_8881168_5 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009479 328.0
BYD3_k127_8881168_6 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000435 261.0
BYD3_k127_8899602_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 589.0
BYD3_k127_8899602_1 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 381.0
BYD3_k127_8899602_2 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003251 302.0
BYD3_k127_8899602_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000009968 198.0
BYD3_k127_8899602_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000004347 166.0
BYD3_k127_8899602_5 Ribosomal protein S16 K02959 - - 0.000000000000000000000008768 104.0
BYD3_k127_8899602_6 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0008150,GO:0040007 - 0.00000000000000000000003989 109.0
BYD3_k127_8904345_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 471.0
BYD3_k127_8904345_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 451.0
BYD3_k127_8904345_10 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000006731 175.0
BYD3_k127_8904345_11 Glutathione peroxidase - - - 0.00000000000000000000000000000000000000000001186 171.0
BYD3_k127_8904345_12 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000001194 167.0
BYD3_k127_8904345_13 DinB superfamily - - - 0.0000000000000000000000000000000002479 138.0
BYD3_k127_8904345_14 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000004668 142.0
BYD3_k127_8904345_15 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000004885 121.0
BYD3_k127_8904345_16 Bifunctional sulfur carrier protein thiazole synthase K03154 - - 0.0000000000000000972 81.0
BYD3_k127_8904345_17 serine threonine protein kinase K08884,K12132 GO:0000270,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009605,GO:0009607,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0010698,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0022603,GO:0022604,GO:0030145,GO:0030203,GO:0030234,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032091,GO:0034645,GO:0036211,GO:0040007,GO:0042304,GO:0042546,GO:0042802,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043388,GO:0043393,GO:0043412,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046872,GO:0046890,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051055,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0075136,GO:0080090,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.11.1 0.000000000001939 78.0
BYD3_k127_8904345_18 Preprotein translocase, YajC subunit K03210 - - 0.000000000008764 70.0
BYD3_k127_8904345_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 335.0
BYD3_k127_8904345_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 330.0
BYD3_k127_8904345_4 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 317.0
BYD3_k127_8904345_5 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 309.0
BYD3_k127_8904345_6 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 318.0
BYD3_k127_8904345_7 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 316.0
BYD3_k127_8904345_8 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000002452 253.0
BYD3_k127_8904345_9 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000001093 190.0
BYD3_k127_8924421_0 Amylo-alpha-1,6-glucosidase - - - 5.466e-250 788.0
BYD3_k127_8924421_1 choline dehydrogenase activity - - - 7.69e-221 727.0
BYD3_k127_8924421_2 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 541.0
BYD3_k127_8924421_3 water channel activity K02440,K06188 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003656 277.0
BYD3_k127_8924421_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000001388 223.0
BYD3_k127_8924421_5 - - - - 0.00000000000000000000000000000000000000000001501 185.0
BYD3_k127_978184_0 efflux transmembrane transporter activity - - - 9.864e-202 659.0
BYD3_k127_978184_1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 354.0
BYD3_k127_978184_2 Tetratricopeptide repeat K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001268 271.0
BYD3_k127_978184_3 Phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003733 260.0
BYD3_k127_978184_4 Peptidase family S58 - - - 0.00000000000000000000000000000000000000000000000000000000000005093 219.0
BYD3_k127_978184_5 - - - - 0.00000000000000001755 83.0
BYD3_k127_979481_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 1.085e-199 626.0
BYD3_k127_979481_1 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 401.0
BYD3_k127_979481_2 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000001247 261.0
BYD3_k127_979481_3 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000001701 218.0
BYD3_k127_979481_4 Ribosomal protein S9/S16 K02996 - - 0.0000000000000000000000000000000000000000000000004162 183.0
BYD3_k127_979481_5 Pfam:CPSase_L_chain K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 0.0000000000000000000000000000000000000000000000006947 186.0
BYD3_k127_979481_6 Biotin-requiring enzyme - - - 0.00000000000000000000000000000001455 140.0
BYD3_k127_98004_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 1.681e-211 666.0
BYD3_k127_98004_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 576.0
BYD3_k127_98004_2 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 325.0
BYD3_k127_98004_3 PFAM Histone deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005963 255.0
BYD3_k127_98004_4 - - - - 0.000000000000000000003302 98.0
BYD3_k127_98004_5 Zincin-like metallopeptidase - - - 0.0000000000000000159 92.0
BYD3_k127_98004_6 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.00000000004131 70.0
BYD3_k127_98004_7 - - - - 0.00002238 53.0
BYD3_k127_986669_0 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 498.0
BYD3_k127_986669_1 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 391.0
BYD3_k127_986669_2 purine nucleotide biosynthetic process K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 369.0
BYD3_k127_986669_3 Involved in the oxidation of myo-inositol (MI) to 2- keto-myo-inositol (2KMI or 2-inosose) K00010 - 1.1.1.18,1.1.1.369 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 355.0
BYD3_k127_986669_4 Periplasmic binding protein domain K02058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 335.0
BYD3_k127_986669_5 Xylose isomerase-like TIM barrel K03335 - 4.2.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 323.0
BYD3_k127_990616_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006727 363.0
BYD3_k127_990616_1 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000000001351 191.0
BYD3_k127_990616_2 OmpA family - - - 0.00000000000000000000000000000000000000000002815 170.0
BYD3_k127_990616_3 peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000001629 163.0
BYD3_k127_990616_4 Putative adhesin - - - 0.00000000000000027 89.0
BYD3_k127_990616_5 - - - - 0.00000001611 64.0
BYD3_k127_998763_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1241.0
BYD3_k127_998763_1 Bacterial transcriptional activator domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 315.0
BYD3_k127_998763_2 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000001342 123.0
BYD3_k127_998763_3 - - - - 0.0000000002551 67.0
BYD3_k127_998763_4 Bacterial Ig-like domain (group 2) - - - 0.00001725 53.0
BYD3_k127_998763_5 Bacterial Ig-like domain 2 - - - 0.0009716 48.0