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Overview

ID MAG00114
Name BYD3_bin.27
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family Burkholderiaceae
Genus JAEUPI01
Species
Assembly information
Completeness (%) 84.6
Contamination (%) 0.65
GC content (%) 69.0
N50 (bp) 10,186
Genome size (bp) 4,698,862

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes4661

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1004638_0 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 409.0
BYD3_k127_1004638_1 nitrogen regulation protein NR(I) K07712 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 310.0
BYD3_k127_1004638_2 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002624 305.0
BYD3_k127_1004638_3 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000000000233 190.0
BYD3_k127_1004638_4 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000007121 154.0
BYD3_k127_1004638_5 Bacterial Ig-like domain (group 3) - - - 0.0000000000000000000611 106.0
BYD3_k127_1010243_0 Diguanylate cyclase - - - 2.531e-299 950.0
BYD3_k127_1010243_1 PFAM isocitrate isopropylmalate dehydrogenase K07246 - 1.1.1.83,1.1.1.93,4.1.1.73 1.298e-200 628.0
BYD3_k127_1010243_10 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008643 340.0
BYD3_k127_1010243_11 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 350.0
BYD3_k127_1010243_12 Histidine kinase K07711 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004489 285.0
BYD3_k127_1010243_13 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000006095 176.0
BYD3_k127_1010243_14 ABC-type phosphate transport system, periplasmic component - - - 0.000000000000000000000000000000000000000007061 159.0
BYD3_k127_1010243_15 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000025 159.0
BYD3_k127_1010243_16 Extracellular ligand-binding receptor K01999 - - 0.0000005113 51.0
BYD3_k127_1010243_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 496.0
BYD3_k127_1010243_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 496.0
BYD3_k127_1010243_4 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 462.0
BYD3_k127_1010243_5 PFAM Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 446.0
BYD3_k127_1010243_6 cAMP biosynthetic process K00870,K12132 - 2.7.1.37,2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 429.0
BYD3_k127_1010243_7 KR domain K00034 - 1.1.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003034 371.0
BYD3_k127_1010243_8 PFAM Succinylglutamate desuccinylase aspartoacylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006588 373.0
BYD3_k127_1010243_9 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008815 341.0
BYD3_k127_1023824_0 Histidine kinase K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005881 591.0
BYD3_k127_1023824_1 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000388 540.0
BYD3_k127_1023824_10 Thermostable hemolysin - - - 0.000000000000000000000000000000000000000000000000000000001203 205.0
BYD3_k127_1023824_11 PFAM Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000938 215.0
BYD3_k127_1023824_12 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000003681 205.0
BYD3_k127_1023824_13 PFAM Di-haem cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000009697 207.0
BYD3_k127_1023824_14 - - - - 0.00000000000000000000000000000000000000000000000002212 184.0
BYD3_k127_1023824_15 Cytochrome c - - - 0.00000000000000000000000000000000000000000000001564 175.0
BYD3_k127_1023824_16 ABC-type transport auxiliary lipoprotein component K18480 - - 0.00000000000000000000000000000004414 143.0
BYD3_k127_1023824_17 Domain of unknown function (DUF1924) - - - 0.00000000000000000000000009493 107.0
BYD3_k127_1023824_18 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000001327 79.0
BYD3_k127_1023824_19 Domain of unknown function (DUF1924) - - - 0.000003527 58.0
BYD3_k127_1023824_2 Transcriptional regulatory protein, C terminal K02483,K07666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 380.0
BYD3_k127_1023824_3 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002719 384.0
BYD3_k127_1023824_4 Cytochrome b/b6/petB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 347.0
BYD3_k127_1023824_5 Abc transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 354.0
BYD3_k127_1023824_6 Iron-containing redox enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 339.0
BYD3_k127_1023824_7 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 296.0
BYD3_k127_1023824_8 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003962 262.0
BYD3_k127_1023824_9 Pfam:Pyridox_oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009459 244.0
BYD3_k127_1026651_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08351 - - 1.574e-262 816.0
BYD3_k127_1026651_1 Diguanylate cyclase K13590 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004877 616.0
BYD3_k127_103891_0 NADPH-dependent glutamate synthase beta - - - 4.79e-321 988.0
BYD3_k127_103891_1 Fe-S oxidoreductase K21834 - - 1.421e-214 695.0
BYD3_k127_103891_10 - - - - 0.0000000000000000000000000000000003525 151.0
BYD3_k127_103891_11 Transcriptional regulator - - - 0.0000000000000000000000000001251 117.0
BYD3_k127_103891_12 Belongs to the HesB IscA family K13628 - - 0.000000000000000001843 91.0
BYD3_k127_103891_2 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 597.0
BYD3_k127_103891_3 Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 569.0
BYD3_k127_103891_4 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 403.0
BYD3_k127_103891_5 Histidine kinase K07673 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 360.0
BYD3_k127_103891_6 Uroporphyrin-III C-methyltransferase K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 357.0
BYD3_k127_103891_7 Bacterial regulatory proteins, luxR family K07684 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 311.0
BYD3_k127_103891_8 nitrate reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001055 263.0
BYD3_k127_103891_9 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 - - 0.0000000000000000000000000000000000000000001862 167.0
BYD3_k127_1039133_0 Periplasmic binding proteins and sugar binding domain of LacI family K10439,K10552 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 538.0
BYD3_k127_1039133_1 Belongs to the binding-protein-dependent transport system permease family K10553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 513.0
BYD3_k127_1039133_2 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008116 439.0
BYD3_k127_1039133_3 PFAM regulatory protein TetR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 301.0
BYD3_k127_1039133_4 Mandelate Racemase Muconate Lactonizing - - - 0.0000000005866 63.0
BYD3_k127_104179_0 PFAM Orn Lys Arg decarboxylase K01584 - 4.1.1.19 0.0 1374.0
BYD3_k127_104179_1 Participates in both transcription termination and antitermination K02600 - - 2.942e-271 840.0
BYD3_k127_104179_2 C-terminal region of band_7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 507.0
BYD3_k127_104179_3 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 400.0
BYD3_k127_104179_4 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 332.0
BYD3_k127_104179_5 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000000000000000000000000000000000000002548 215.0
BYD3_k127_104179_6 Membrane protein implicated in regulation of membrane protease activity - - - 0.00000000000000000000000000000000000000000000005073 175.0
BYD3_k127_104179_7 Glycine zipper 2TM domain K04062 - - 0.0000000000001176 73.0
BYD3_k127_1047064_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1707.0
BYD3_k127_1047064_1 Peptidase M48 K06013 - 3.4.24.84 3.347e-196 620.0
BYD3_k127_1047064_10 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 382.0
BYD3_k127_1047064_11 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007457 362.0
BYD3_k127_1047064_12 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 342.0
BYD3_k127_1047064_13 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006404 340.0
BYD3_k127_1047064_14 Protein of unknown function, DUF599 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008726 336.0
BYD3_k127_1047064_15 Nudix hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005671 296.0
BYD3_k127_1047064_17 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 291.0
BYD3_k127_1047064_18 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001319 288.0
BYD3_k127_1047064_19 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000000000000000003236 239.0
BYD3_k127_1047064_2 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 604.0
BYD3_k127_1047064_20 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000000000000000002729 205.0
BYD3_k127_1047064_21 TM2 domain - - - 0.00000000000000000000000000000000000000000000000001552 183.0
BYD3_k127_1047064_22 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000002721 175.0
BYD3_k127_1047064_23 - - - - 0.000000000000000000000000000000000000000009483 161.0
BYD3_k127_1047064_24 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000000000000002196 134.0
BYD3_k127_1047064_25 Helix-hairpin-helix motif K02237 - - 0.0000000001872 66.0
BYD3_k127_1047064_3 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 562.0
BYD3_k127_1047064_4 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 486.0
BYD3_k127_1047064_5 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 467.0
BYD3_k127_1047064_6 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 448.0
BYD3_k127_1047064_7 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 438.0
BYD3_k127_1047064_8 glycosyl transferase family 8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 409.0
BYD3_k127_1047064_9 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 381.0
BYD3_k127_1061773_0 Bacterial extracellular solute-binding protein - - - 4.046e-243 756.0
BYD3_k127_1061773_1 Mandelate racemase muconate lactonizing enzyme K20023 - 4.2.1.156,4.2.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 606.0
BYD3_k127_1061773_2 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 545.0
BYD3_k127_1061773_3 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 513.0
BYD3_k127_1061773_4 PFAM regulatory protein LacI K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 370.0
BYD3_k127_1061773_5 transcriptional regulator K10973,K13641 - - 0.000000000000000000000000000000000000000000002619 171.0
BYD3_k127_1075264_0 alpha-glucan phosphorylase K00688 - 2.4.1.1 0.0 1128.0
BYD3_k127_1075264_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 6.056e-219 686.0
BYD3_k127_1075264_2 ATP-binding region, ATPase domain protein - - - 0.0001528 51.0
BYD3_k127_1111410_0 Bacterial transcriptional regulator K19333 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005059 417.0
BYD3_k127_1111410_1 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 348.0
BYD3_k127_1111410_2 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000008729 236.0
BYD3_k127_1120146_0 COG1653 ABC-type sugar transport system, periplasmic component K17321 - - 1.071e-267 827.0
BYD3_k127_1120146_1 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 4.904e-222 699.0
BYD3_k127_1120146_2 Belongs to the ABC transporter superfamily K17325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 472.0
BYD3_k127_1120146_3 Binding-protein-dependent transport system inner membrane component K17323 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 462.0
BYD3_k127_1120146_4 ABC transporter (Permease K17322 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 442.0
BYD3_k127_1120146_5 Belongs to the ABC transporter superfamily K17324 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 419.0
BYD3_k127_1120146_6 PFAM regulatory protein DeoR K02444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007769 403.0
BYD3_k127_1120146_7 COG1653 ABC-type sugar transport system, periplasmic component K17321 - - 0.000000000000000000000000000000000000000000000009698 175.0
BYD3_k127_1120146_8 Small integral membrane protein - - - 0.000002335 49.0
BYD3_k127_1126417_0 PFAM FAD linked oxidase domain protein K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 2.513e-252 806.0
BYD3_k127_1126417_1 Phospholipase D. Active site motifs. K00995,K06131 - 2.7.8.5 3.448e-228 717.0
BYD3_k127_1126417_10 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 309.0
BYD3_k127_1126417_11 TraB family K09973 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 305.0
BYD3_k127_1126417_12 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003403 268.0
BYD3_k127_1126417_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000001119 219.0
BYD3_k127_1126417_14 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000008999 180.0
BYD3_k127_1126417_15 Belongs to the UPF0337 (CsbD) family - - - 0.0000000000000000000000000000000003799 133.0
BYD3_k127_1126417_16 Protein of unknown function (DUF3567) - - - 0.0000000000000000000001135 106.0
BYD3_k127_1126417_17 bacterial OsmY and nodulation domain - - - 0.000000000000000000005589 99.0
BYD3_k127_1126417_18 SMART Rhodanese domain protein - - - 0.0000000000001251 71.0
BYD3_k127_1126417_19 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000918,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0007049,GO:0007346,GO:0008150,GO:0009987,GO:0010564,GO:0016020,GO:0016043,GO:0022402,GO:0022607,GO:0032465,GO:0032506,GO:0032954,GO:0032955,GO:0042802,GO:0044085,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051301,GO:0051302,GO:0051726,GO:0061640,GO:0065007,GO:0071840,GO:0071944,GO:0090529,GO:1901891,GO:1902410,GO:1902412,GO:1903047,GO:1903436 - 0.0000000004583 68.0
BYD3_k127_1126417_2 4Fe-4S dicluster domain K11473 - - 9.866e-205 645.0
BYD3_k127_1126417_3 Multidrug DMT transporter permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 520.0
BYD3_k127_1126417_4 Diguanylate cyclase K21023 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 536.0
BYD3_k127_1126417_5 FIST_C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 457.0
BYD3_k127_1126417_6 PFAM FAD linked oxidase domain protein K00104,K11472 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 448.0
BYD3_k127_1126417_7 Belongs to the ParA family K03609 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 445.0
BYD3_k127_1126417_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006795 361.0
BYD3_k127_1126417_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 354.0
BYD3_k127_1139885_0 Belongs to the binding-protein-dependent transport system permease family K01997,K01998 - - 4.163e-300 931.0
BYD3_k127_1139885_1 Extracellular liganD-binding receptor K01999 - - 1.173e-212 665.0
BYD3_k127_1139885_2 Amino acid synthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 323.0
BYD3_k127_1139885_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K09740 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 330.0
BYD3_k127_1139885_4 Amino acid synthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 320.0
BYD3_k127_1139885_5 COG1180 Pyruvate-formate lyase-activating enzyme K20449 - 1.3.7.1 0.0000001691 52.0
BYD3_k127_1140408_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 3.454e-197 625.0
BYD3_k127_1140408_1 Belongs to the ABC transporter superfamily K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 479.0
BYD3_k127_1140408_2 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000007221 222.0
BYD3_k127_1140408_3 Belongs to the frataxin family K06202 - - 0.0000000000000000000000000000000000000000004918 160.0
BYD3_k127_116668_0 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 6.546e-281 873.0
BYD3_k127_116668_1 AMP-binding enzyme K01897 - 6.2.1.3 2.539e-194 617.0
BYD3_k127_116668_2 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006041 489.0
BYD3_k127_116668_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 365.0
BYD3_k127_116668_4 signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007744 342.0
BYD3_k127_116668_5 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000003172 265.0
BYD3_k127_116668_6 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.000000000000000000000000000000000000000000000000000000000000000001164 237.0
BYD3_k127_116668_7 RNA-binding protein - - - 0.0000000000000000000000000000000000000000000000000000005333 196.0
BYD3_k127_116668_8 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.000000000000000000000000000000006455 129.0
BYD3_k127_1220974_0 Iron permease FTR1 family K07243 - - 3.163e-206 653.0
BYD3_k127_1220974_1 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 311.0
BYD3_k127_1220974_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001847 255.0
BYD3_k127_1220974_3 outer membrane autotransporter barrel domain - - - 0.00000000000000000000000000000000000000000000003455 191.0
BYD3_k127_1220974_4 PFAM CBS domain containing protein - - - 0.0000000000000000000000000000000000000000000002175 178.0
BYD3_k127_1220974_5 AhpC/TSA family - - - 0.000000000000000000000000000000000000000003305 162.0
BYD3_k127_1220974_6 Predicted small integral membrane protein (DUF2165) - - - 0.0000000004339 66.0
BYD3_k127_1230049_0 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 476.0
BYD3_k127_1230049_1 Endonuclease exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 396.0
BYD3_k127_1230049_2 Ankyrin repeats (many copies) K06867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 302.0
BYD3_k127_1230049_3 PFAM Taurine catabolism dioxygenase TauD TfdA K03119 - 1.14.11.17 0.0000000000000000000000000000000000000000000000000000000000007991 221.0
BYD3_k127_1230049_4 Putative glycolipid-binding K09957 - - 0.00000000000000000000000000000000000000000000001607 177.0
BYD3_k127_1247095_0 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 442.0
BYD3_k127_1247095_1 phosphonate ABC transporter, inner membrane subunit K02042 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009717 431.0
BYD3_k127_1247095_2 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 348.0
BYD3_k127_1247095_3 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005032 305.0
BYD3_k127_1247095_4 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000001557 221.0
BYD3_k127_1247095_5 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772,K03815 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000002561 216.0
BYD3_k127_1247095_6 protein conserved in bacteria K09931 - - 0.00000000000000000000000000000000000000000000000001713 193.0
BYD3_k127_1256550_0 Serine threonine protein kinase - - - 7.967e-207 644.0
BYD3_k127_1256550_1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 370.0
BYD3_k127_1256550_2 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.00003737 56.0
BYD3_k127_1273831_0 glutamate synthase, alpha subunit domain protein K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 2748.0
BYD3_k127_1273831_1 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 2.338e-273 857.0
BYD3_k127_1273831_10 MlaA lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001795 272.0
BYD3_k127_1273831_11 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000000002804 221.0
BYD3_k127_1273831_12 PFAM ABC transporter related K02028,K09972 - 3.6.3.21 0.00000000000000000000000000000000000000000000003423 174.0
BYD3_k127_1273831_13 STAS domain K07122 - - 0.000000000000000000000002616 105.0
BYD3_k127_1273831_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 1.431e-271 841.0
BYD3_k127_1273831_3 Belongs to the GPI family K01810 - 5.3.1.9 3.72e-202 648.0
BYD3_k127_1273831_4 extracellular solute-binding protein, family 3 K02030,K09969,K10001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006491 505.0
BYD3_k127_1273831_5 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009921 473.0
BYD3_k127_1273831_6 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007388 465.0
BYD3_k127_1273831_7 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 429.0
BYD3_k127_1273831_8 acid transport system permease K09970 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006325 417.0
BYD3_k127_1273831_9 toluene tolerance K07323 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004302 284.0
BYD3_k127_1342954_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 3.738e-270 850.0
BYD3_k127_1342954_1 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 546.0
BYD3_k127_1342954_10 Regulatory protein GntR HTH K05799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008136 276.0
BYD3_k127_1342954_11 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000001715 274.0
BYD3_k127_1342954_12 Diguanylate cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000005909 217.0
BYD3_k127_1342954_13 Protein of unknown function (DUF2917) - - - 0.0003254 48.0
BYD3_k127_1342954_2 ATPase component of ABC-type sugar transporter K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 509.0
BYD3_k127_1342954_3 Binding-protein-dependent transport system inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 481.0
BYD3_k127_1342954_4 Methylenetetrahydrofolate reductase K00297 GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005131 458.0
BYD3_k127_1342954_5 PFAM NAD-dependent epimerase dehydratase K22025 - 1.1.1.410 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 439.0
BYD3_k127_1342954_6 LysR substrate binding domain K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004021 309.0
BYD3_k127_1342954_7 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 318.0
BYD3_k127_1342954_8 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K08319 - 1.1.1.411 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 295.0
BYD3_k127_1342954_9 Binding-protein-dependent transport system inner membrane component K02025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005673 288.0
BYD3_k127_1371963_0 Domain of unknown function (DUF5117) - - - 0.0 1211.0
BYD3_k127_1371963_1 ABC transporter K06020 - 3.6.3.25 1.24e-316 975.0
BYD3_k127_1371963_2 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 5.099e-215 681.0
BYD3_k127_1371963_3 His Kinase A (phosphoacceptor) domain - - - 5.841e-195 631.0
BYD3_k127_1371963_4 Binding-protein-dependent transport system inner membrane component K02042 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 407.0
BYD3_k127_1371963_5 binding-protein-dependent transport systems inner membrane component K02042 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005674 389.0
BYD3_k127_1371963_6 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002297 271.0
BYD3_k127_1371963_7 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.0000000000000000000000000000000000000000000000000000000000000000000006545 241.0
BYD3_k127_1371963_8 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001502 239.0
BYD3_k127_1377623_0 enoyl-CoA hydratase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006168 396.0
BYD3_k127_1377623_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008136 357.0
BYD3_k127_1377623_2 Peptidase dimerisation domain - - - 0.00000000000004383 79.0
BYD3_k127_1379368_0 Peptidase C39 family K06147 - - 0.0 1028.0
BYD3_k127_1379368_1 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 494.0
BYD3_k127_1379368_2 SMART protein phosphatase 2C domain protein K01090 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000003475 255.0
BYD3_k127_1379368_3 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000002503 256.0
BYD3_k127_1379368_4 ABC transporter K06147 - - 0.00000000000000000000000000000000000000000000000000000000000001754 216.0
BYD3_k127_1379368_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000001211 96.0
BYD3_k127_1379368_6 - - - - 0.00000000003281 69.0
BYD3_k127_1403827_0 Amidase K02433,K21801 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003823 273.0
BYD3_k127_1403827_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005612 271.0
BYD3_k127_1403827_2 Rhodanese-like domain - - - 0.000000000000000000000000000000000000000000000000000001311 194.0
BYD3_k127_1403827_3 DinB family - - - 0.00000000000000000000000000000000000000000000014 180.0
BYD3_k127_1403827_4 Transcriptional regulator, LysR family - - - 0.0000000000000000000000000000008343 124.0
BYD3_k127_1403827_5 TRAP transporter solute receptor, TAXI family K07080 - - 0.0000000215 68.0
BYD3_k127_1408011_0 Ring hydroxylating alpha subunit (catalytic domain) K16319,K18242 - 1.14.12.1,1.14.13.172 2.896e-255 794.0
BYD3_k127_1408011_1 Acyl-CoA dehydrogenase, C-terminal domain K16047,K20942 - 1.14.14.12,1.14.14.27 1.629e-238 741.0
BYD3_k127_1408011_10 Bacterial extracellular solute-binding protein, family 7 K21395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005878 266.0
BYD3_k127_1408011_11 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000000000000000000000000000000008953 220.0
BYD3_k127_1408011_12 Rieske-like [2Fe-2S] domain K05710,K14578,K14750 - - 0.000000000000000000000000000000000000000000000000000003855 191.0
BYD3_k127_1408011_13 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000000000000000000000000000000000000000001733 201.0
BYD3_k127_1408011_14 - - - - 0.00000000000000000000000000000000003706 137.0
BYD3_k127_1408011_15 Oxidoreductase FAD-binding domain K00523,K14581 - 1.17.1.1,1.18.1.7 0.00000000000000000000000000000068 122.0
BYD3_k127_1408011_16 - - - - 0.00000000000000000000000000003788 125.0
BYD3_k127_1408011_18 - - - - 0.0000000000000000008079 87.0
BYD3_k127_1408011_19 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.0000000000000003881 90.0
BYD3_k127_1408011_2 Amidohydrolase K07045,K14333,K20941 - 4.1.1.103,4.1.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009199 557.0
BYD3_k127_1408011_3 Tripartite ATP-independent periplasmic transporter, DctM component K11690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 463.0
BYD3_k127_1408011_4 PFAM intradiol ring-cleavage dioxygenase K04098 - 1.13.11.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 404.0
BYD3_k127_1408011_5 SnoaL-like domain K16320,K18243 - 1.14.12.1,1.14.13.172 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 313.0
BYD3_k127_1408011_6 Crp-like helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 317.0
BYD3_k127_1408011_7 PFAM flavin reductase domain protein, FMN-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005587 297.0
BYD3_k127_1408011_8 alpha/beta hydrolase fold K10216,K18092 - 3.7.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000001316 265.0
BYD3_k127_1408011_9 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004282 256.0
BYD3_k127_1419929_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 3.699e-253 792.0
BYD3_k127_1419929_1 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007506 561.0
BYD3_k127_1419929_2 ThiF family K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 361.0
BYD3_k127_1419929_3 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 344.0
BYD3_k127_1419929_4 ABC-type Fe3 transport system, permease component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000001787 225.0
BYD3_k127_1419929_5 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000009668 168.0
BYD3_k127_1419929_6 Protein kinase domain - - - 0.000000000000000000000000000000000000001433 151.0
BYD3_k127_1419929_7 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000004833 123.0
BYD3_k127_1419929_8 Protein of unknown function (DUF1631) - - - 0.0000000000000008078 92.0
BYD3_k127_1446341_0 Pfam Sulfatase K01133 - 3.1.6.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 595.0
BYD3_k127_1446341_1 helix_turn_helix gluconate operon transcriptional repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003906 432.0
BYD3_k127_1446341_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000356 258.0
BYD3_k127_1446341_3 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000001035 261.0
BYD3_k127_1446341_4 Belongs to the peptidase M16 family - - - 0.0000000000000000000000000000000000000000000000000000000183 206.0
BYD3_k127_1446341_5 Transcriptional regulator - - - 0.0000000000002304 77.0
BYD3_k127_1462172_0 Carbamoyltransferase K00612 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 496.0
BYD3_k127_1462172_1 3-beta hydroxysteroid dehydrogenase/isomerase family K01710,K01784,K02473,K08678 - 4.1.1.35,4.2.1.46,5.1.3.2,5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 401.0
BYD3_k127_1462172_2 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005136 400.0
BYD3_k127_1462172_3 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000728 368.0
BYD3_k127_1462172_4 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 361.0
BYD3_k127_1477265_0 Belongs to the thiolase family K00626 - 2.3.1.9 1.82e-223 702.0
BYD3_k127_1477265_1 cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 8.28e-217 698.0
BYD3_k127_1477265_10 TupA-like ATPgrasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 309.0
BYD3_k127_1477265_11 Cyclic nucleotide-monophosphate binding domain K10914 - - 0.00000000000000000000000000000000000000000000000000000000000000000009633 256.0
BYD3_k127_1477265_12 Belongs to the enoyl-CoA hydratase isomerase family K07516 - 1.1.1.35 0.000000000000000000000000000000000002796 138.0
BYD3_k127_1477265_2 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 515.0
BYD3_k127_1477265_3 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 500.0
BYD3_k127_1477265_4 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006221 478.0
BYD3_k127_1477265_5 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007675 458.0
BYD3_k127_1477265_6 Oxidoreductase FAD-binding domain K00523,K14581 - 1.17.1.1,1.18.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 422.0
BYD3_k127_1477265_7 diguanylate cyclase K13590,K21019 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007438 426.0
BYD3_k127_1477265_8 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008003 406.0
BYD3_k127_1477265_9 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008185 379.0
BYD3_k127_1489592_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 7.682e-211 665.0
BYD3_k127_1489592_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 596.0
BYD3_k127_1489592_2 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 323.0
BYD3_k127_1489592_3 Family of unknown function (DUF1028) - - - 0.00000000000000000000000000000000000000000000000000000000000000000005295 258.0
BYD3_k127_1489592_4 Phosphotransferase enzyme family - - - 0.0000000000000008331 78.0
BYD3_k127_1509933_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1627.0
BYD3_k127_1509933_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 4.695e-282 872.0
BYD3_k127_1509933_10 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 342.0
BYD3_k127_1509933_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 3.039e-256 798.0
BYD3_k127_1509933_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 8.679e-214 670.0
BYD3_k127_1509933_4 PFAM Squalene phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 461.0
BYD3_k127_1509933_5 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 444.0
BYD3_k127_1509933_6 Flavin containing amine oxidoreductase K21677 - 1.17.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 410.0
BYD3_k127_1509933_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006164 391.0
BYD3_k127_1509933_8 Belongs to the peptidase S11 family K07262 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 369.0
BYD3_k127_1509933_9 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 353.0
BYD3_k127_1514488_0 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 441.0
BYD3_k127_1514488_1 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 446.0
BYD3_k127_1514488_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 397.0
BYD3_k127_1514488_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006084 277.0
BYD3_k127_1514488_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001951 274.0
BYD3_k127_151772_0 ABC transporter substrate-binding protein K10117 - - 2.114e-200 632.0
BYD3_k127_151772_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 561.0
BYD3_k127_151772_10 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000003476 233.0
BYD3_k127_151772_11 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000000000000000000000000003722 211.0
BYD3_k127_151772_12 PFAM regulatory protein, MarR - - - 0.00000000000000000000000000000000000000000000000000000005845 199.0
BYD3_k127_151772_13 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000008112 153.0
BYD3_k127_151772_14 oxidoreductase - - - 0.000000000000000000000000000000000000001804 149.0
BYD3_k127_151772_15 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000001592 132.0
BYD3_k127_151772_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 474.0
BYD3_k127_151772_3 Binding-protein-dependent transport system inner membrane component K02025,K10118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 462.0
BYD3_k127_151772_4 ABC-type sugar transport system, permease component K10119 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 451.0
BYD3_k127_151772_5 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008966 415.0
BYD3_k127_151772_6 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 348.0
BYD3_k127_151772_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 304.0
BYD3_k127_151772_8 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002696 248.0
BYD3_k127_151772_9 Lactoylglutathione lyase K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000003934 230.0
BYD3_k127_1523600_0 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000006395 222.0
BYD3_k127_1523600_1 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000001609 209.0
BYD3_k127_1523600_2 Predicted membrane protein (DUF2231) - - - 0.0000000000000000000000000000000000000000000000009822 181.0
BYD3_k127_1523600_3 - - - - 0.000000000000000000000000000000000000000000000013 179.0
BYD3_k127_1523600_6 PFAM Lipocalin family protein K03098 - - 0.0000000000000000001099 94.0
BYD3_k127_1543718_0 Gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 1.472e-204 657.0
BYD3_k127_1543718_1 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006642 497.0
BYD3_k127_1543718_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005732 461.0
BYD3_k127_1543718_3 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 316.0
BYD3_k127_1543718_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 297.0
BYD3_k127_1543718_5 regulator - - - 0.00000000000000000000000000000000000000000000000000000005114 210.0
BYD3_k127_1622020_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1518.0
BYD3_k127_1622020_1 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 0.0 1020.0
BYD3_k127_1622020_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 362.0
BYD3_k127_1622020_3 Belongs to the urease beta subunit family K01429 - 3.5.1.5 0.00000000000000000000000000000000000000000000000003987 182.0
BYD3_k127_1622020_4 Belongs to the urease gamma subunit family K01430 - 3.5.1.5 0.000000000000000000000000000000000000000000000000532 177.0
BYD3_k127_1622020_5 PFAM Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000162 116.0
BYD3_k127_1622020_6 Addiction module antidote - - - 0.000000000000000000000006086 103.0
BYD3_k127_1622125_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0 1296.0
BYD3_k127_1622125_1 VWA domain containing CoxE-like protein K09989 - - 6.482e-231 721.0
BYD3_k127_1622125_10 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000000106 166.0
BYD3_k127_1622125_11 Protein of unknown function (DUF971) - - - 0.0000000000000000001232 91.0
BYD3_k127_1622125_2 NMT1-like family K15553 - - 4.756e-223 703.0
BYD3_k127_1622125_3 surface antigen K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 632.0
BYD3_k127_1622125_4 ferredoxin--nadp reductase K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 429.0
BYD3_k127_1622125_5 PFAM Peptidase S41 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 420.0
BYD3_k127_1622125_6 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008687 413.0
BYD3_k127_1622125_7 PFAM Peptidase S41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007091 403.0
BYD3_k127_1622125_8 Conserved hypothetical protein 698 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004499 358.0
BYD3_k127_1622125_9 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 353.0
BYD3_k127_1624139_0 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K04090 - 1.2.7.8 0.0 1834.0
BYD3_k127_1624139_1 helix_turn_helix ASNC type - - - 0.000000000000000000000000000000000000000000000000000000000008064 214.0
BYD3_k127_163162_0 oxidoreductase K04090 - 1.2.7.8 0.0 2027.0
BYD3_k127_163162_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 5.108e-279 880.0
BYD3_k127_163162_10 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009867 370.0
BYD3_k127_163162_11 Glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 319.0
BYD3_k127_163162_12 Lysine transporter LysE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007741 308.0
BYD3_k127_163162_13 helix_turn_helix ASNC type K03719 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003348 268.0
BYD3_k127_163162_14 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006008 280.0
BYD3_k127_163162_15 YceI-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004095 233.0
BYD3_k127_163162_16 Glutathione S-transferase, N-terminal domain K11208 - - 0.00000000000000000000000000000000000000000000000000000000000000001142 248.0
BYD3_k127_163162_17 Redoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000008288 218.0
BYD3_k127_163162_18 ApaG domain K06195 - - 0.0000000000000000000000000000000000000000000000000000000000001762 213.0
BYD3_k127_163162_19 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000007727 210.0
BYD3_k127_163162_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006021 584.0
BYD3_k127_163162_20 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000002584 194.0
BYD3_k127_163162_21 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000001329 193.0
BYD3_k127_163162_22 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000000000000000002288 174.0
BYD3_k127_163162_23 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000002106 167.0
BYD3_k127_163162_24 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000004411 147.0
BYD3_k127_163162_25 regulation of single-species biofilm formation - - - 0.00000000000001139 77.0
BYD3_k127_163162_3 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 514.0
BYD3_k127_163162_4 MltA specific insert domain K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 515.0
BYD3_k127_163162_5 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 465.0
BYD3_k127_163162_6 Amidase K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 486.0
BYD3_k127_163162_7 TIGRFAM diguanylate cyclase (GGDEF) domain K21019 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 447.0
BYD3_k127_163162_8 PFAM class II aldolase adducin family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 390.0
BYD3_k127_163162_9 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 383.0
BYD3_k127_163590_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 4.028e-283 891.0
BYD3_k127_163590_1 Bacterial extracellular solute-binding protein K02055 - - 2.845e-253 792.0
BYD3_k127_163590_10 Racemase K16841 - 5.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000007746 248.0
BYD3_k127_163590_11 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000004131 74.0
BYD3_k127_163590_2 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 548.0
BYD3_k127_163590_3 TOBE domain K02052,K11072 - 3.6.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 535.0
BYD3_k127_163590_4 Binding-protein-dependent transport system inner membrane component K02053 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004875 495.0
BYD3_k127_163590_5 Binding-protein-dependent transport system inner membrane component K02054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008807 428.0
BYD3_k127_163590_6 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 391.0
BYD3_k127_163590_7 Protein of unknown function DUF45 K07043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 362.0
BYD3_k127_163590_8 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 337.0
BYD3_k127_163590_9 D,D-heptose 1,7-bisphosphate phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 295.0
BYD3_k127_1640440_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1202.0
BYD3_k127_1640440_1 Succinyl-CoA ligase like flavodoxin domain K09181 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002339 269.0
BYD3_k127_1640440_2 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000001099 70.0
BYD3_k127_1662813_0 Lipase (class 2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 525.0
BYD3_k127_1662813_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 463.0
BYD3_k127_1662813_2 PFAM peptidase S58 DmpA K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 396.0
BYD3_k127_1662813_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 372.0
BYD3_k127_1662813_4 PFAM Acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 298.0
BYD3_k127_1662813_5 histidine kinase A domain protein K07679 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 315.0
BYD3_k127_1669508_0 FAD linked oxidase - - - 5.843e-211 668.0
BYD3_k127_1669508_1 Major facilitator Superfamily K08162,K08226,K16211 - - 1.398e-206 659.0
BYD3_k127_1669508_2 MmgE PrpD family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 591.0
BYD3_k127_1669508_3 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01576,K01652 - 2.2.1.6,4.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 521.0
BYD3_k127_1669508_4 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 394.0
BYD3_k127_1669508_5 PFAM fumarate lyase K01756,K01857 - 4.3.2.2,5.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 376.0
BYD3_k127_1669508_6 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001132 278.0
BYD3_k127_1669508_7 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.000000000000000000000000000000000000000000000000000001656 192.0
BYD3_k127_1705186_0 Protein of unknown function - - - 0.0 1499.0
BYD3_k127_1705186_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1028.0
BYD3_k127_1705186_10 PPIC-type PPIASE domain - - - 0.0000000000000000000000000000000000000000000001614 183.0
BYD3_k127_1705186_11 Protein of unknown function (DUF3485) - - - 0.000000000000000000000000000000000000000001463 173.0
BYD3_k127_1705186_12 Thioesterase-like superfamily - - - 0.0000000000000000000000000000003547 125.0
BYD3_k127_1705186_13 Domain of Unknown Function (DUF350) - - - 0.000000000000000000000000000003963 123.0
BYD3_k127_1705186_14 PEP-CTERM motif - - - 0.0000000001874 68.0
BYD3_k127_1705186_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 3.076e-266 827.0
BYD3_k127_1705186_3 Domain of unknown function (DUF4178) - - - 2.441e-194 619.0
BYD3_k127_1705186_4 SPFH domain-Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 576.0
BYD3_k127_1705186_5 UbiH UbiF VisC COQ6 family K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 500.0
BYD3_k127_1705186_6 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 509.0
BYD3_k127_1705186_7 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 402.0
BYD3_k127_1705186_8 Transmembrane exosortase (Exosortase_EpsH) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007388 259.0
BYD3_k127_1705186_9 Cysteine-rich secretory protein family - - - 0.00000000000000000000000000000000000000000000003216 177.0
BYD3_k127_1727385_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1624.0
BYD3_k127_1727385_1 Acetyl-coenzyme A synthetase N-terminus K01908 - 6.2.1.17 0.0 1084.0
BYD3_k127_1727385_10 Cell wall-associated K13695,K19303 - - 0.00000000000000000000000000000000000000000000000000001185 194.0
BYD3_k127_1727385_11 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000000000000000002087 161.0
BYD3_k127_1727385_2 Large family of predicted nucleotide-binding domains K07175 - - 1.22e-247 776.0
BYD3_k127_1727385_3 Peptidase family M3 K01392 - 3.4.24.15 1.836e-247 781.0
BYD3_k127_1727385_4 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004967 568.0
BYD3_k127_1727385_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 475.0
BYD3_k127_1727385_6 PFAM aminotransferase, class I and II K14260 - 2.6.1.2,2.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 418.0
BYD3_k127_1727385_7 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 406.0
BYD3_k127_1727385_8 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 299.0
BYD3_k127_1727385_9 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001922 272.0
BYD3_k127_173032_0 FAD linked oxidase domain protein - - - 0.0 1437.0
BYD3_k127_173032_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 2.87e-225 713.0
BYD3_k127_173032_2 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K07303 - 1.3.99.16 1.134e-216 681.0
BYD3_k127_173032_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 493.0
BYD3_k127_173032_4 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 451.0
BYD3_k127_173032_5 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000001055 251.0
BYD3_k127_173032_6 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000000000000000001735 214.0
BYD3_k127_173032_7 Regulatory protein GntR HTH - - - 0.00000000000000000000000000006268 117.0
BYD3_k127_1740728_0 lipoprotein releasing system, transmembrane protein, LolC E family K09808 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008104,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0034613,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0070727,GO:0071944,GO:0072657,GO:0098796,GO:0098797 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 572.0
BYD3_k127_1740728_1 Protein of unknown function (DUF1298) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 520.0
BYD3_k127_1740728_10 PFAM conserved - - - 0.000000000007062 65.0
BYD3_k127_1740728_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006357 458.0
BYD3_k127_1740728_3 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 357.0
BYD3_k127_1740728_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 333.0
BYD3_k127_1740728_5 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007288 324.0
BYD3_k127_1740728_6 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004746 268.0
BYD3_k127_1740728_7 NADH pyrophosphatase-like rudimentary NUDIX domain K03426 - 3.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000009332 256.0
BYD3_k127_1740728_8 DNA alkylation repair - - - 0.00000000000000000000000000000000000000000000000002336 188.0
BYD3_k127_1740728_9 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000002189 141.0
BYD3_k127_1750485_0 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 2.72e-206 646.0
BYD3_k127_1750485_1 Outer membrane receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006471 571.0
BYD3_k127_1750485_2 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006139,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009063,GO:0009072,GO:0009074,GO:0009108,GO:0009117,GO:0009165,GO:0009308,GO:0009310,GO:0009435,GO:0009987,GO:0016043,GO:0016053,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019441,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0020037,GO:0022607,GO:0034641,GO:0034654,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043648,GO:0043650,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046218,GO:0046394,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0046906,GO:0048037,GO:0051186,GO:0051188,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 483.0
BYD3_k127_1750485_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 365.0
BYD3_k127_1750485_4 Sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002009 265.0
BYD3_k127_1750485_5 penicillin-binding protein - - - 0.00000000003552 71.0
BYD3_k127_1750485_6 typically periplasmic, contain C-terminal PDZ domain - - - 0.000005058 57.0
BYD3_k127_1759274_0 L-serine dehydratase K01752 - 4.3.1.17 4.461e-239 745.0
BYD3_k127_1759274_1 Flavin-binding monooxygenase-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000009755 235.0
BYD3_k127_1759274_2 - - - - 0.0000007917 52.0
BYD3_k127_1791447_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 7.478e-267 842.0
BYD3_k127_1791447_1 TIGRFAM phosphate binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 350.0
BYD3_k127_1791447_2 phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000000000000000000000000000009194 151.0
BYD3_k127_1804668_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1506.0
BYD3_k127_1804668_1 PFAM Sulfatase K01130 - 3.1.6.1 2.636e-232 727.0
BYD3_k127_1804668_2 PFAM acyl-CoA dehydrogenase domain protein - - - 2.495e-222 692.0
BYD3_k127_1804668_3 Rieske [2Fe-2S] domain - - - 3.52e-216 679.0
BYD3_k127_1804668_4 Prolyl 4-hydroxylase alpha subunit homologues. K00472 - 1.14.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006807 449.0
BYD3_k127_1804668_5 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 436.0
BYD3_k127_1804668_6 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 321.0
BYD3_k127_1804668_7 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000004513 199.0
BYD3_k127_1804668_8 - - - - 0.00000000000000000000000000000000000000000000003982 181.0
BYD3_k127_1808982_0 Periplasmic binding protein K02016,K06858 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000468 276.0
BYD3_k127_1808982_1 ABC transporter K02013 - 3.6.3.34 0.00000000000000000000000000000000005987 138.0
BYD3_k127_1808982_2 HAMP domain - - - 0.0000000000000000007388 97.0
BYD3_k127_1808982_3 - - - - 0.0004335 47.0
BYD3_k127_1841226_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 5.562e-259 802.0
BYD3_k127_1841226_1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032 - - 7.355e-229 737.0
BYD3_k127_1841226_2 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005306 510.0
BYD3_k127_1841226_3 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 430.0
BYD3_k127_1841226_4 phosphoserine phosphatase K01079 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009814 407.0
BYD3_k127_1841226_5 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 393.0
BYD3_k127_1841226_6 Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 389.0
BYD3_k127_1841226_7 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005065 373.0
BYD3_k127_1841226_8 MlrC C-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005312 289.0
BYD3_k127_1841226_9 extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000207 207.0
BYD3_k127_1843531_0 Tripartite tricarboxylate transporter TctA family K07793 - - 7.042e-273 844.0
BYD3_k127_1843531_1 Gamma-glutamyltranspeptidase K00681 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.3.2.2,3.4.19.13 1.725e-263 820.0
BYD3_k127_1843531_2 Transmembrane secretion effector - - - 3.799e-204 649.0
BYD3_k127_1843531_3 acetyltransferase - - - 0.000000000000000001135 92.0
BYD3_k127_1852403_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 301.0
BYD3_k127_1852403_1 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005956 269.0
BYD3_k127_1852403_2 Protein of unknown function (DUF2726) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005396 271.0
BYD3_k127_1852403_3 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002491 248.0
BYD3_k127_1852403_4 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005388 242.0
BYD3_k127_1852403_5 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000000000000000000000000001076 183.0
BYD3_k127_1852403_6 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000003268 180.0
BYD3_k127_1852403_7 Required for insertion of 4Fe-4S clusters K15724 - - 0.00000000000000000000000000000007054 130.0
BYD3_k127_1853650_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0 1529.0
BYD3_k127_1853650_1 homocysteine S-methyltransferase K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007707 560.0
BYD3_k127_1853650_2 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008488 282.0
BYD3_k127_1853650_3 SMART Rhodanese domain protein - - - 0.0000000000000000000000000000000000000000000000000000003359 196.0
BYD3_k127_1853650_4 chlorophyll binding - - - 0.00000000000000000002754 97.0
BYD3_k127_1916069_0 Proton-conducting membrane transporter - - - 8.567e-214 682.0
BYD3_k127_1916069_1 Proton-conducting membrane transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000442 473.0
BYD3_k127_1916069_2 Na H antiporter, MnhB K05566 - - 0.000000000000000000000000000000000000000000000000000000000000000463 223.0
BYD3_k127_1916069_3 Na H antiporter, MnhB K05566 - - 0.00000000000000000000000000000000000000000000000000000000000019 222.0
BYD3_k127_1916069_4 COG1863 Multisubunit Na H antiporter MnhE subunit K05569 - - 0.0000000000000000000000000000000000000000000000000000000006181 205.0
BYD3_k127_1916069_5 COG1006 Multisubunit Na H antiporter, MnhC subunit K05567 - - 0.0000000000000000000000000000000000000000004327 163.0
BYD3_k127_1916069_6 monovalent cation:proton antiporter activity K05571 - - 0.000000000000000000000000000000000000007225 147.0
BYD3_k127_1916069_7 Multiple resistance and pH regulation protein F K05570 - - 0.0000000000000000000000000003634 124.0
BYD3_k127_1926790_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 0.0 1614.0
BYD3_k127_1926790_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 7.197e-224 698.0
BYD3_k127_1926790_2 Negative regulator of K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000013 273.0
BYD3_k127_1926790_3 response regulator K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000008315 222.0
BYD3_k127_1933923_0 Erythromycin esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 534.0
BYD3_k127_1933923_1 Taurine catabolism dioxygenase TauD, TfdA family K06912 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 492.0
BYD3_k127_1933923_2 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006544 491.0
BYD3_k127_1933923_3 PFAM Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008587 349.0
BYD3_k127_1933923_4 SnoaL-like domain - - - 0.00000000000000000000000000000000000002079 151.0
BYD3_k127_1933923_5 ChaB - - - 0.000000000000000000000000000000000139 141.0
BYD3_k127_1933923_6 CHRD domain - - - 0.000000000000000000000000000001865 131.0
BYD3_k127_195300_0 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 3.081e-253 789.0
BYD3_k127_195300_1 Superoxide dismutase K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007247 488.0
BYD3_k127_195300_2 Chromate resistance exported protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 384.0
BYD3_k127_195300_3 ligase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 362.0
BYD3_k127_195300_4 Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000005634 252.0
BYD3_k127_1981326_0 Methylmalonyl-CoA mutase large subunit K01847 - 5.4.99.2 0.0 1250.0
BYD3_k127_1981326_1 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 630.0
BYD3_k127_1981326_2 ArgK protein K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 442.0
BYD3_k127_1981326_3 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 330.0
BYD3_k127_1981326_4 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 0.0000000000000000000008381 95.0
BYD3_k127_1997828_0 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 430.0
BYD3_k127_1997828_1 enoyl-CoA hydratase K13779 - 4.2.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000003196 250.0
BYD3_k127_1997828_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000003328 236.0
BYD3_k127_1997828_3 Enoyl-CoA hydratase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000005634 181.0
BYD3_k127_1997828_4 PFAM Acyl-CoA dehydrogenase K11731 - - 0.00000000000000000000000000000000000000000001845 162.0
BYD3_k127_1997828_5 enoyl-CoA hydratase K13779 - 4.2.1.57 0.000000004619 57.0
BYD3_k127_1998963_0 Protein of unknown function (DUF1631) - - - 0.0 1030.0
BYD3_k127_1998963_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 528.0
BYD3_k127_1998963_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 395.0
BYD3_k127_1998963_3 Belongs to the Smg family K03747 - - 0.0000000000000006238 77.0
BYD3_k127_2007698_0 Sugar (and other) transporter - - - 2.866e-226 708.0
BYD3_k127_2007698_1 ribonuclease, Rne Rng family K08301 - - 1.496e-222 699.0
BYD3_k127_2007698_10 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.000000000000000000000001288 104.0
BYD3_k127_2007698_2 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 511.0
BYD3_k127_2007698_3 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002415 254.0
BYD3_k127_2007698_4 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000000000000000000001973 232.0
BYD3_k127_2007698_5 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000008713 235.0
BYD3_k127_2007698_6 Domain of Unknown Function (DUF748) - - - 0.000000000000000000000000000000000000000000000000000000000006703 237.0
BYD3_k127_2007698_7 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000004801 224.0
BYD3_k127_2007698_8 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000000000000000000000000000007432 208.0
BYD3_k127_2007698_9 PFAM regulatory protein TetR - - - 0.00000000000000000000000008269 117.0
BYD3_k127_2032522_0 Penicillin amidase K01434 - 3.5.1.11 2.687e-267 853.0
BYD3_k127_2032522_1 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008145 278.0
BYD3_k127_2057968_0 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 7.163e-254 786.0
BYD3_k127_2057968_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008683 457.0
BYD3_k127_2057968_10 Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000000000000000000000008728 192.0
BYD3_k127_2057968_11 Belongs to the UPF0434 family K09791 - - 0.00000000000000001289 89.0
BYD3_k127_2057968_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 400.0
BYD3_k127_2057968_3 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000866 372.0
BYD3_k127_2057968_4 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 364.0
BYD3_k127_2057968_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 366.0
BYD3_k127_2057968_6 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 356.0
BYD3_k127_2057968_7 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008002 318.0
BYD3_k127_2057968_8 Urate oxidase N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001258 275.0
BYD3_k127_2057968_9 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000000000000000000000000000003427 203.0
BYD3_k127_2065095_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1336.0
BYD3_k127_2065095_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 429.0
BYD3_k127_2065095_2 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 402.0
BYD3_k127_2065095_3 HemX, putative uroporphyrinogen-III C-methyltransferase K02496,K13543 - 2.1.1.107,4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 355.0
BYD3_k127_2065095_4 HemY protein N-terminus K02498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 314.0
BYD3_k127_2065095_5 PFAM response regulator receiver K08083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004591 294.0
BYD3_k127_2065095_6 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000002666 228.0
BYD3_k127_2065095_7 argininosuccinate lyase K01755 - 4.3.2.1 0.000000000000000000000000292 109.0
BYD3_k127_2094923_0 flagellar hook-associated protein K02396 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000721 466.0
BYD3_k127_2094923_1 TIGRFAM flagellar rod assembly protein muramidase FlgJ K02395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 320.0
BYD3_k127_2094923_2 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000001381 230.0
BYD3_k127_2122115_0 SpoVR like protein K06415 - - 2.196e-299 935.0
BYD3_k127_2122115_1 Belongs to the UPF0229 family K09786 - - 6.758e-236 734.0
BYD3_k127_2122115_2 FAD linked oxidases, C-terminal domain K00102,K03777 - 1.1.2.4,1.1.5.12 3.923e-213 665.0
BYD3_k127_2122115_3 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 1.016e-201 632.0
BYD3_k127_2122115_4 PrkA AAA domain K07180 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008267 534.0
BYD3_k127_2122115_5 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 405.0
BYD3_k127_2122115_6 Cobalamin adenosyltransferase K00798 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003341 292.0
BYD3_k127_2122115_7 FAD linked oxidases, C-terminal domain K00102,K03777 - 1.1.2.4,1.1.5.12 0.000000000000000000000000000001351 124.0
BYD3_k127_2126161_0 E1-E2 ATPase K17686 - 3.6.3.54 0.0 1167.0
BYD3_k127_2126161_1 Multicopper oxidase K22348 - 1.16.3.3 5.166e-274 847.0
BYD3_k127_2126161_10 Copper binding periplasmic protein CusF - - - 0.000000000000000000000006566 112.0
BYD3_k127_2126161_11 - - - - 0.000000000000004133 82.0
BYD3_k127_2126161_12 - - - - 0.0000000002728 73.0
BYD3_k127_2126161_13 - - - - 0.000002085 57.0
BYD3_k127_2126161_14 Outer membrane efflux protein - - - 0.000141 54.0
BYD3_k127_2126161_2 PFAM Outer membrane efflux protein - - - 8.099e-201 634.0
BYD3_k127_2126161_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 546.0
BYD3_k127_2126161_4 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 391.0
BYD3_k127_2126161_5 Bacterial regulatory proteins, tetR family K05501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 331.0
BYD3_k127_2126161_6 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004848 269.0
BYD3_k127_2126161_7 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000000000000000000000000000000000000000000000000000000000001363 226.0
BYD3_k127_2126161_8 Protein of unknown function (DUF815) K06923 - - 0.000000000000000000000000000000000000000000000003782 175.0
BYD3_k127_2126161_9 - - - - 0.0000000000000000000000000000000000000009779 152.0
BYD3_k127_2179686_0 L-lysine 6-monooxygenase (NADPH-requiring) K07222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 553.0
BYD3_k127_2179686_1 Peptidase family U32 K08303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007045 526.0
BYD3_k127_2179686_10 carboxylic ester hydrolase activity - - - 0.0000000000003743 73.0
BYD3_k127_2179686_2 PFAM peptidase U32 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 375.0
BYD3_k127_2179686_3 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632 299.0
BYD3_k127_2179686_4 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001158 269.0
BYD3_k127_2179686_5 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000000000000000000000008925 188.0
BYD3_k127_2179686_6 SCP-2 sterol transfer family - - - 0.00000000000000000000000000000000000000000005276 173.0
BYD3_k127_2179686_7 SMART alpha amylase catalytic sub domain K01187 - 3.2.1.20 0.000000000000000000000000000000001696 135.0
BYD3_k127_2179686_8 SnoaL-like domain - - - 0.0000000000000000000000387 104.0
BYD3_k127_2179686_9 SMART alpha amylase, catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.00000000000003386 77.0
BYD3_k127_2184790_0 Nad-dependent epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 434.0
BYD3_k127_2184790_1 transcriptional regulator, araC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 406.0
BYD3_k127_2184790_2 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 316.0
BYD3_k127_2184790_3 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001352 272.0
BYD3_k127_2184790_4 - - - - 0.000000000000000003202 91.0
BYD3_k127_2184790_5 FG-GAP repeat - - - 0.000000000000000109 94.0
BYD3_k127_2203927_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 372.0
BYD3_k127_2203927_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 317.0
BYD3_k127_2203927_2 Carbamoyltransferase K00612 - - 0.000000000000000000000000000000000000000003729 157.0
BYD3_k127_2227181_0 Dihydrodipicolinate synthetase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006527 508.0
BYD3_k127_2227181_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005018 379.0
BYD3_k127_2227181_2 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 312.0
BYD3_k127_2227181_3 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007954 287.0
BYD3_k127_2227181_4 Acetyltransferase (GNAT) family - - - 0.0000000000000000000001334 100.0
BYD3_k127_2237972_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 3.877e-224 700.0
BYD3_k127_2237972_1 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 581.0
BYD3_k127_2237972_2 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 504.0
BYD3_k127_2237972_3 Male sterility protein K02473 - 5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 477.0
BYD3_k127_2237972_4 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.000000000000000000000000000000000000000000000000000000000001205 211.0
BYD3_k127_2237972_5 protein conserved in bacteria K03690 - - 0.0000000000000000000000000000000000000000000000000000004074 204.0
BYD3_k127_2259943_0 FAD linked oxidase domain protein - - - 0.0 1292.0
BYD3_k127_2259943_1 PFAM extracellular solute-binding protein family 1 K05813 - - 5.559e-214 680.0
BYD3_k127_2259943_2 PFAM binding-protein-dependent transport systems inner membrane component K05814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 440.0
BYD3_k127_2266163_0 May be involved in recombinational repair of damaged DNA K03631 - - 1.206e-216 686.0
BYD3_k127_2266163_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 474.0
BYD3_k127_2266163_2 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 462.0
BYD3_k127_2266163_3 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 431.0
BYD3_k127_2266163_4 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 296.0
BYD3_k127_2266163_5 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001146 265.0
BYD3_k127_2277855_0 ABC transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 412.0
BYD3_k127_2277855_1 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009531 406.0
BYD3_k127_2277855_2 Isochorismatase family K08281 - 3.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 363.0
BYD3_k127_2277855_3 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K18030 - 1.17.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000106 243.0
BYD3_k127_2277855_4 2Fe-2S -binding domain protein K18029 - 1.17.2.1 0.00000000000000000000000000000000000000000000000000000000005743 210.0
BYD3_k127_2277855_5 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.00000000003746 66.0
BYD3_k127_2295853_0 belongs to the aldehyde dehydrogenase family K00137 - 1.2.1.19 8.9e-260 805.0
BYD3_k127_2295853_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052,K11072 - 3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 457.0
BYD3_k127_2295853_2 Binding-protein-dependent transport system inner membrane component K02054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 461.0
BYD3_k127_2295853_3 ABC transporter permease K02053 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009290,GO:0009292,GO:0009294,GO:0009987,GO:0015931,GO:0016020,GO:0044464,GO:0044764,GO:0050657,GO:0051027,GO:0051179,GO:0051234,GO:0051704,GO:0071702,GO:0071705,GO:0071944,GO:0098657 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009796 384.0
BYD3_k127_2295853_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007957 272.0
BYD3_k127_2295853_5 PFAM peptidase S58 DmpA - - - 0.00000000000000000000000000000000000000000000000000000000000000001452 252.0
BYD3_k127_2295853_6 PFAM peptidase S58 DmpA - - - 0.0000000000000000000000000000000000000000000000000000000000000003322 236.0
BYD3_k127_2295853_7 regulator of chromosome condensation, RCC1 - - - 0.000000000000000000001355 109.0
BYD3_k127_2295853_8 repeat protein - - - 0.00000000002084 77.0
BYD3_k127_2307392_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370,K17050 - 1.7.5.1 0.0 1204.0
BYD3_k127_2307392_1 nitrite transporter K02575 - - 1.154e-253 788.0
BYD3_k127_2307392_2 PFAM Major facilitator superfamily K02575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 347.0
BYD3_k127_2321147_0 FtsX-like permease family K02004 - - 5.622e-268 849.0
BYD3_k127_2321147_1 PFAM Rieske 2Fe-2S domain protein K18068 - 1.14.12.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 497.0
BYD3_k127_2321147_2 chemotaxis sensory transducer K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 489.0
BYD3_k127_2321147_3 Lipocalin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 433.0
BYD3_k127_2321147_4 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009805 284.0
BYD3_k127_2321147_5 Methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002658 248.0
BYD3_k127_2321147_6 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000001998 200.0
BYD3_k127_2321147_7 Protein of unknown function (DUF3014) - - - 0.0000000000000000000003252 98.0
BYD3_k127_2321919_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 450.0
BYD3_k127_2321919_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 421.0
BYD3_k127_2321919_10 Domain of unknown function (DUF4936) - - - 0.00000000003004 74.0
BYD3_k127_2321919_11 aldo keto reductase - - - 0.0000005826 51.0
BYD3_k127_2321919_2 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 379.0
BYD3_k127_2321919_3 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 351.0
BYD3_k127_2321919_4 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000753 354.0
BYD3_k127_2321919_5 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000001256 280.0
BYD3_k127_2321919_6 pilus assembly K02676 - - 0.0000000000000000000000000000000000000000000000000000000000005455 214.0
BYD3_k127_2321919_7 Ankyrin repeats (many copies) K06867 - - 0.00000000000000000000000000000000000000000000000000000000002721 211.0
BYD3_k127_2321919_8 Iron-containing alcohol dehydrogenase K00043,K00217 - 1.1.1.61,1.3.1.32 0.000000000000000000000000000000000003986 141.0
BYD3_k127_2321919_9 - - - - 0.000000000008049 69.0
BYD3_k127_2329079_0 Short chain dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004892 376.0
BYD3_k127_2329079_1 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 383.0
BYD3_k127_2329079_2 Crp-like helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008151 305.0
BYD3_k127_2329079_3 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009167 283.0
BYD3_k127_2329079_4 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000001267 196.0
BYD3_k127_2329079_5 - - - - 0.00000000000000000000005511 110.0
BYD3_k127_2329079_6 histidine kinase A domain protein - - - 0.00000000000000002195 93.0
BYD3_k127_2329079_7 - - - - 0.00000000000000003765 85.0
BYD3_k127_2329079_8 - - - - 0.0000000001405 67.0
BYD3_k127_2329079_9 Domain of unknown function (DUF4398) - - - 0.000000002646 64.0
BYD3_k127_2343266_0 binding-protein-dependent transport systems inner membrane component K02011 - - 3.022e-274 860.0
BYD3_k127_2343266_1 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 3.547e-235 736.0
BYD3_k127_2343266_10 Phosphonate utilization associated transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000002423 222.0
BYD3_k127_2343266_11 PFAM Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000006411 199.0
BYD3_k127_2343266_2 Na+/Pi-cotransporter K03324 - - 6.177e-234 737.0
BYD3_k127_2343266_3 FAD dependent oxidoreductase - - - 4.388e-220 691.0
BYD3_k127_2343266_4 type I phosphodiesterase nucleotide pyrophosphatase K19670 - 3.11.1.2 6.793e-214 677.0
BYD3_k127_2343266_5 TIGRFAM 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009177 602.0
BYD3_k127_2343266_6 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily K03430 - 2.6.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009465 594.0
BYD3_k127_2343266_7 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008504 501.0
BYD3_k127_2343266_8 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 398.0
BYD3_k127_2343266_9 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005463 337.0
BYD3_k127_2348196_0 Histidine Phosphotransfer domain - - - 7.551e-224 722.0
BYD3_k127_2348196_1 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 4.922e-211 661.0
BYD3_k127_2348196_2 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004825 576.0
BYD3_k127_2348196_3 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 462.0
BYD3_k127_2348196_4 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 325.0
BYD3_k127_2348196_5 gag-polyprotein putative aspartyl protease K06985 - - 0.0000000000000000000000000000000000000000000000000000000000000007833 233.0
BYD3_k127_2348196_6 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000001583 201.0
BYD3_k127_2348196_7 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000007158 203.0
BYD3_k127_2414594_0 Putative serine dehydratase domain K01753 - 4.3.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 595.0
BYD3_k127_2414594_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 434.0
BYD3_k127_2414594_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K16871 - 2.6.1.96 0.00000000000000000000000000000000000000000000004606 177.0
BYD3_k127_2414594_3 FAD binding domain K00480,K20940 - 1.14.13.1,1.14.13.218 0.000000000000000000000000000000000000000002366 159.0
BYD3_k127_2511965_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 1.17e-198 622.0
BYD3_k127_2511965_1 Histidine kinase K10125,K19661 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009203 424.0
BYD3_k127_2511965_2 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 424.0
BYD3_k127_2511965_3 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000002755 204.0
BYD3_k127_2511965_4 cheY-homologous receiver domain - - - 0.0000000000000000000000000000001688 139.0
BYD3_k127_2529201_0 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 490.0
BYD3_k127_2529201_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 389.0
BYD3_k127_2529201_2 ribosomal rna small subunit methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009086 337.0
BYD3_k127_2529201_3 COG0685 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000002675 190.0
BYD3_k127_2537662_0 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 447.0
BYD3_k127_2537662_1 Mg2 transporter protein K16074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 364.0
BYD3_k127_2537662_2 Histidine kinase - - - 0.000000000000000000000000000000000000000002074 173.0
BYD3_k127_2537662_3 CHAD K01768 - 4.6.1.1 0.0000000000005573 74.0
BYD3_k127_254008_0 Belongs to the thiolase family K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005429 594.0
BYD3_k127_254008_1 Histidine kinase K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007244 541.0
BYD3_k127_254008_2 Bacterial regulatory proteins, tetR family K09017 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 306.0
BYD3_k127_254008_3 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.000000000000000000000000000000000000001142 158.0
BYD3_k127_254008_4 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000001777 147.0
BYD3_k127_2540391_0 Major Facilitator - - - 7.916e-219 686.0
BYD3_k127_2540391_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 325.0
BYD3_k127_2540391_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000004028 127.0
BYD3_k127_2540391_3 cheY-homologous receiver domain - - - 0.000000000000000000000000003513 117.0
BYD3_k127_2540391_4 EF-hand domain pair - - - 0.0000395 56.0
BYD3_k127_2586176_0 Insulinase (Peptidase family M16) K07263 - - 0.0 1176.0
BYD3_k127_2586176_1 AMP-binding enzyme C-terminal domain K18661 - - 1.113e-249 777.0
BYD3_k127_2586176_11 Tripartite ATP-independent periplasmic - - - 0.000000000000000000000000000000000007215 144.0
BYD3_k127_2586176_12 DNA-binding transcription factor activity - - - 0.00000000000000000000000000000003377 142.0
BYD3_k127_2586176_13 Ubiquinone biosynthesis protein COQ7 K06134 - - 0.000000000000000002679 85.0
BYD3_k127_2586176_14 Cysteine-rich CWC - - - 0.0000000000000001753 83.0
BYD3_k127_2586176_2 PFAM amino acid permease-associated region K16238 - - 4.177e-223 699.0
BYD3_k127_2586176_3 TRAP C4-dicarboxylate transport system permease DctM subunit K11690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005705 585.0
BYD3_k127_2586176_4 Transposase IS116 IS110 IS902 family protein K07486 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 524.0
BYD3_k127_2586176_5 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005793 399.0
BYD3_k127_2586176_6 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 362.0
BYD3_k127_2586176_7 PFAM YaeQ family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 319.0
BYD3_k127_2586176_8 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000007617 197.0
BYD3_k127_2586176_9 isomerase activity - - - 0.000000000000000000000000000000000000000000000001756 177.0
BYD3_k127_2602120_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 584.0
BYD3_k127_2602120_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 558.0
BYD3_k127_2602120_2 phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 504.0
BYD3_k127_2602120_3 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000619 403.0
BYD3_k127_2602120_4 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004557 395.0
BYD3_k127_2602120_5 Transcriptional regulator K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 374.0
BYD3_k127_2602120_6 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 322.0
BYD3_k127_2602120_7 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 288.0
BYD3_k127_2614366_0 AAA ATPase domain - - - 0.0 1135.0
BYD3_k127_2614366_1 KaiC K08482 - - 1e-203 646.0
BYD3_k127_2614366_2 PFAM Acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 542.0
BYD3_k127_2614366_3 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 415.0
BYD3_k127_2614366_4 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000000000000000001679 164.0
BYD3_k127_2616066_0 DMSO reductase anchor subunit (DmsC) K07307 - - 2.135e-306 952.0
BYD3_k127_2616066_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 2.331e-239 743.0
BYD3_k127_2616066_2 Sigma-70 region 2 - - - 0.0000000000000000000000000000000000000000000000000000004888 200.0
BYD3_k127_2616066_3 AntiSigma factor - - - 0.0000000000000000000000000000000000000000002119 168.0
BYD3_k127_2616066_4 Subtilase family - - - 0.0000000000004885 78.0
BYD3_k127_2619079_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 7.085e-227 707.0
BYD3_k127_2619079_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003796 531.0
BYD3_k127_2619079_10 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000000000002678 122.0
BYD3_k127_2619079_11 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000007603 85.0
BYD3_k127_2619079_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006675 510.0
BYD3_k127_2619079_3 malonyl CoA-acyl carrier protein transacylase K00645,K15355 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 448.0
BYD3_k127_2619079_4 Negative regulator of sigma E activity K03598 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008735 367.0
BYD3_k127_2619079_5 reductase K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 349.0
BYD3_k127_2619079_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 326.0
BYD3_k127_2619079_7 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000004195 153.0
BYD3_k127_2619079_8 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000002075 144.0
BYD3_k127_2619079_9 PFAM Anti sigma-E protein RseA K03597 - - 0.00000000000000000000000000000000002843 141.0
BYD3_k127_263970_0 PFAM Phospholipase D Transphosphatidylase K06132 - - 1.827e-207 659.0
BYD3_k127_263970_1 FAD binding domain K10676 - 1.14.13.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007263 544.0
BYD3_k127_263970_2 Cytochrome B561 K12262 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007819 263.0
BYD3_k127_263970_3 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008244 265.0
BYD3_k127_263970_4 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000000006549 224.0
BYD3_k127_263970_5 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000007531 228.0
BYD3_k127_263970_6 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000007789 224.0
BYD3_k127_263970_7 COG1226 Kef-type K transport systems - - - 0.0000000000000000000000000000000000000000000000000003778 209.0
BYD3_k127_263970_8 PFAM Cyclic nucleotide-binding - - - 0.000000000000000000000000000000003855 138.0
BYD3_k127_263970_9 Protein of unknown function (DUF3307) - - - 0.00000000000000000000000000008908 129.0
BYD3_k127_2684552_0 Elongation factor G, domain IV K02355 - - 0.0 1153.0
BYD3_k127_2684552_1 Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations K01241 - 3.2.2.4 9.484e-258 812.0
BYD3_k127_2684552_10 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 324.0
BYD3_k127_2684552_11 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 312.0
BYD3_k127_2684552_12 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 286.0
BYD3_k127_2684552_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002402 227.0
BYD3_k127_2684552_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000001265 222.0
BYD3_k127_2684552_15 - - - - 0.0000000000000000002003 96.0
BYD3_k127_2684552_16 Unextendable partial coding region - - - 0.00000000000000003246 85.0
BYD3_k127_2684552_2 Tfp pilus assembly protein FimV - - - 1.033e-251 789.0
BYD3_k127_2684552_3 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 2.818e-218 694.0
BYD3_k127_2684552_4 Cobalamin synthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 608.0
BYD3_k127_2684552_5 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 594.0
BYD3_k127_2684552_6 Transporter associated domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 437.0
BYD3_k127_2684552_7 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 376.0
BYD3_k127_2684552_8 PGAP1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004919 348.0
BYD3_k127_2684552_9 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 334.0
BYD3_k127_2692826_0 Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain K00101 - 1.1.2.3 5.689e-216 685.0
BYD3_k127_2692826_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K03502 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 604.0
BYD3_k127_2692826_2 ribosomal rna small subunit methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005072 486.0
BYD3_k127_2692826_3 argininosuccinate lyase K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 442.0
BYD3_k127_2692826_4 sister chromatid segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008885 297.0
BYD3_k127_2692826_5 Protein of unknown function (DUF454) K09790 - - 0.00000000000000000000000000000000000000000000000000000000006406 209.0
BYD3_k127_2692826_6 cellulase activity - - - 0.00000000000000000000000000000000000000000000000000000006222 211.0
BYD3_k127_2699848_0 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 0.0 1282.0
BYD3_k127_2699848_1 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 2.529e-278 871.0
BYD3_k127_2699848_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000433 420.0
BYD3_k127_2699848_3 CbbX protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006465 420.0
BYD3_k127_2699848_4 LysR substrate binding domain K21703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 355.0
BYD3_k127_2699848_5 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000766 339.0
BYD3_k127_2699848_6 PFAM ribulose bisphosphate carboxylase small chain K01602 - 4.1.1.39 0.000000000000000000000000000000000000000000000000001771 203.0
BYD3_k127_2699848_7 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K01086,K03841 - 3.1.3.11,3.1.3.37 0.00000000000000000000000000009019 117.0
BYD3_k127_2704017_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18303 - - 0.0 1536.0
BYD3_k127_2704017_1 PFAM Phospholipase D Transphosphatidylase K06132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 437.0
BYD3_k127_2704017_2 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal K10714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 421.0
BYD3_k127_2704017_3 Beta-ribofuranosylaminobenzene 5-phosphate synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 407.0
BYD3_k127_2704017_4 type I secretion outer membrane protein, TolC K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 383.0
BYD3_k127_2704017_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 291.0
BYD3_k127_2704017_6 dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000000000000000000000000002054 224.0
BYD3_k127_2704017_7 PFAM Mo-dependent nitrogenase - - - 0.00000000000000000000000000000000000000000000000000000002043 212.0
BYD3_k127_2704017_8 Tetratrico peptide repeat - - - 0.00000000000000000000000000000000000000000000007131 175.0
BYD3_k127_2759437_0 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 578.0
BYD3_k127_2759437_1 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009644 330.0
BYD3_k127_2759437_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000006704 151.0
BYD3_k127_2779882_0 Belongs to the enoyl-CoA hydratase isomerase family K07516 - 1.1.1.35 0.0 1174.0
BYD3_k127_2779882_1 PFAM AMP-dependent synthetase and ligase K20034 - 6.2.1.44 1.639e-303 938.0
BYD3_k127_2779882_10 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 424.0
BYD3_k127_2779882_11 KR domain K00046 - 1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 410.0
BYD3_k127_2779882_12 Alpha beta hydrolase K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008025 387.0
BYD3_k127_2779882_13 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 363.0
BYD3_k127_2779882_14 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 359.0
BYD3_k127_2779882_15 ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 367.0
BYD3_k127_2779882_16 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 346.0
BYD3_k127_2779882_17 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008559 314.0
BYD3_k127_2779882_18 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 308.0
BYD3_k127_2779882_19 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003897 300.0
BYD3_k127_2779882_2 Belongs to the UPF0061 (SELO) family - - - 1.309e-223 703.0
BYD3_k127_2779882_20 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 291.0
BYD3_k127_2779882_21 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002247 289.0
BYD3_k127_2779882_22 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000001727 227.0
BYD3_k127_2779882_23 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000005274 207.0
BYD3_k127_2779882_24 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000376 220.0
BYD3_k127_2779882_25 PFAM GCN5-related N-acetyltransferase K02348 - - 0.00000000000000000000000000000000000000000000000000000206 194.0
BYD3_k127_2779882_26 PFAM thioesterase superfamily protein - - - 0.0000000000000000000000000000000000000000000000001446 181.0
BYD3_k127_2779882_27 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000111 181.0
BYD3_k127_2779882_28 Belongs to the BolA IbaG family K05527 - - 0.00000000000000000000000000005912 128.0
BYD3_k127_2779882_3 PFAM acyl-CoA dehydrogenase domain protein K09456 - - 1.472e-218 691.0
BYD3_k127_2779882_4 Belongs to the thiolase family K00626 - 2.3.1.9 1.17e-212 670.0
BYD3_k127_2779882_5 Peptidase dimerisation domain K13049 - - 3.442e-201 637.0
BYD3_k127_2779882_6 PFAM Alcohol dehydrogenase zinc-binding domain protein K07119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 502.0
BYD3_k127_2779882_7 cell septum assembly - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 493.0
BYD3_k127_2779882_8 Esterase of the alpha-beta hydrolase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009138 471.0
BYD3_k127_2779882_9 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 477.0
BYD3_k127_2805726_0 formate dehydrogenase K00122 - 1.17.1.9 1.466e-283 880.0
BYD3_k127_2805726_1 GGDEF domain - - - 3.007e-257 820.0
BYD3_k127_2805726_10 dienelactone hydrolase - - - 0.00000000000000000000000000000000000000000002531 175.0
BYD3_k127_2805726_11 - - - - 0.00000000000000001143 85.0
BYD3_k127_2805726_2 Subtilase family - - - 7.98e-250 792.0
BYD3_k127_2805726_3 PFAM ATP-binding region, ATPase domain protein K10125 - 2.7.13.3 1.193e-223 717.0
BYD3_k127_2805726_4 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 1.103e-214 676.0
BYD3_k127_2805726_5 Sigma-54 interaction domain - - - 1.805e-211 665.0
BYD3_k127_2805726_6 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 584.0
BYD3_k127_2805726_7 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005123 433.0
BYD3_k127_2805726_8 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 328.0
BYD3_k127_2805726_9 Phosphoenolpyruvate phosphomutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003363 248.0
BYD3_k127_2810758_0 Catalytic subunit of the nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein NapC. Essential function for nitrate assimilation and may have a role in anaerobic metabolism K02567 - - 0.0 1468.0
BYD3_k127_2810758_1 NapC/NirT cytochrome c family, N-terminal region K02569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 350.0
BYD3_k127_2810758_2 Electron transfer subunit of the periplasmic nitrate reductase complex NapAB K02568 - - 0.0000000000000000000000000000000000000000000000000007504 191.0
BYD3_k127_2810758_3 protein involved in formation of periplasmic nitrate reductase K02570 - - 0.000000000000000343 88.0
BYD3_k127_2810758_4 Multicopper oxidase K00368,K08100 - 1.3.3.5,1.7.2.1 0.000000000000003877 79.0
BYD3_k127_2810758_5 Nitrate reductase K02571 - - 0.00000000002351 68.0
BYD3_k127_2817341_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 1.768e-254 795.0
BYD3_k127_2817341_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 4.375e-209 657.0
BYD3_k127_2817341_2 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 6.74e-198 627.0
BYD3_k127_2817341_3 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006692 453.0
BYD3_k127_2817341_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000001534 136.0
BYD3_k127_2817341_5 PFAM branched-chain amino acid transport - - - 0.000000000000002111 76.0
BYD3_k127_2889869_0 TRAP dicarboxylate transporter, DctM subunit K03299 - - 2.508e-257 815.0
BYD3_k127_2889869_1 modulator of DNA gyrase K03592 - - 1.043e-224 704.0
BYD3_k127_2889869_10 Tripartite ATP-independent periplasmic transporter DctQ - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008477 282.0
BYD3_k127_2889869_11 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003604 235.0
BYD3_k127_2889869_12 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000000000000000006531 218.0
BYD3_k127_2889869_13 Belongs to the UPF0307 family K09889 - - 0.00000000000000000000000000000000000000000000000000000002937 201.0
BYD3_k127_2889869_14 Putative phosphatase (DUF442) - - - 0.0000000000000000000000000000000000000007195 166.0
BYD3_k127_2889869_15 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000000000000000002762 139.0
BYD3_k127_2889869_16 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000000000000000000007699 134.0
BYD3_k127_2889869_17 - - - - 0.0000000000000000000003444 97.0
BYD3_k127_2889869_18 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000002199 67.0
BYD3_k127_2889869_19 de-polymerase K05973 - 3.1.1.75 0.000000009192 57.0
BYD3_k127_2889869_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 5.076e-202 632.0
BYD3_k127_2889869_3 serine O-acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 447.0
BYD3_k127_2889869_4 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 402.0
BYD3_k127_2889869_5 Glycosyl transferase K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 358.0
BYD3_k127_2889869_6 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 335.0
BYD3_k127_2889869_7 molybdenum cofactor K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 334.0
BYD3_k127_2889869_8 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 312.0
BYD3_k127_2889869_9 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 292.0
BYD3_k127_2892041_0 sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 2.282e-259 804.0
BYD3_k127_2892041_1 Nitrite and sulphite reductase 4Fe-4S domain K11181 - 1.8.99.5 8.524e-230 712.0
BYD3_k127_2892041_10 - - - - 0.00000000000000000002763 95.0
BYD3_k127_2892041_2 Nitrate reductase gamma subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002306 276.0
BYD3_k127_2892041_3 sulfur relay protein TusD DsrE K07235 - - 0.00000000000000000000000000000000000000000000000000000000000001784 216.0
BYD3_k127_2892041_4 DsrC like protein K11179 - - 0.00000000000000000000000000000000000000000000000000000000001272 207.0
BYD3_k127_2892041_5 Cas6 Crispr - - - 0.00000000000000000000000000000000000000000000000000000007481 203.0
BYD3_k127_2892041_6 DsrC like protein K11179 - - 0.000000000000000000000000000000000000000000000000000001771 198.0
BYD3_k127_2892041_7 Sulfur relay protein TusC DsrF K07236 - - 0.000000000000000000000000000000000000000000237 159.0
BYD3_k127_2892041_8 - - - - 0.0000000000000000000000000000000001223 145.0
BYD3_k127_2892041_9 DsrH like protein K07237 - - 0.000000000000000000000000000000001238 136.0
BYD3_k127_2903831_0 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 532.0
BYD3_k127_2903831_1 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 436.0
BYD3_k127_2903831_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000008878 252.0
BYD3_k127_2903831_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000005197 214.0
BYD3_k127_2903831_4 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000001829 168.0
BYD3_k127_2903831_5 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000001547 146.0
BYD3_k127_2903831_6 - - - - 0.00003266 51.0
BYD3_k127_2928475_0 Histidine kinase-like ATPases - - - 2.178e-213 685.0
BYD3_k127_2928475_1 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 568.0
BYD3_k127_2928475_10 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 312.0
BYD3_k127_2928475_11 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 306.0
BYD3_k127_2928475_12 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 285.0
BYD3_k127_2928475_13 hydrolase of the alpha beta superfamily K07018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001952 276.0
BYD3_k127_2928475_14 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000005644 248.0
BYD3_k127_2928475_15 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000000000000000000000000000007178 215.0
BYD3_k127_2928475_16 Ferredoxin - - - 0.00000000000000000000000000000000000000000000000000008523 192.0
BYD3_k127_2928475_17 Uncharacterised protein family (UPF0093) K08973 - - 0.000000000000000000000000000000000000000000000000002032 192.0
BYD3_k127_2928475_18 Belongs to the UPF0250 family K09158 - - 0.000000000000000000000000000000001063 131.0
BYD3_k127_2928475_19 - - - - 0.00000000000000000000000000002963 123.0
BYD3_k127_2928475_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 553.0
BYD3_k127_2928475_3 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 537.0
BYD3_k127_2928475_4 Aminotransferase class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000789 474.0
BYD3_k127_2928475_5 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009712 475.0
BYD3_k127_2928475_6 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 393.0
BYD3_k127_2928475_7 Response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 379.0
BYD3_k127_2928475_8 VanZ like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004361 363.0
BYD3_k127_2928475_9 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004805 328.0
BYD3_k127_2954550_0 His Kinase A (phosphoacceptor) domain - - - 4.055e-307 991.0
BYD3_k127_2954550_1 coagulation factor 5 8 type - - - 5.745e-294 947.0
BYD3_k127_2954550_10 ABC transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007051 445.0
BYD3_k127_2954550_11 ABC-type sugar transport systems, permease components K02025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006937 434.0
BYD3_k127_2954550_12 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 398.0
BYD3_k127_2954550_13 epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 378.0
BYD3_k127_2954550_14 ABC-type sugar transport system, permease component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 374.0
BYD3_k127_2954550_15 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 373.0
BYD3_k127_2954550_2 Belongs to the glycosyl hydrolase 1 family K05350 - 3.2.1.21 1.991e-222 712.0
BYD3_k127_2954550_3 MgsA AAA+ ATPase C terminal K07478 - - 1.466e-215 678.0
BYD3_k127_2954550_4 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004612 600.0
BYD3_k127_2954550_5 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 547.0
BYD3_k127_2954550_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 526.0
BYD3_k127_2954550_7 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009566 535.0
BYD3_k127_2954550_8 ABC transporter substrate-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 476.0
BYD3_k127_2954550_9 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 456.0
BYD3_k127_2954630_0 MMPL family K07003 - - 0.0 1340.0
BYD3_k127_2954630_1 Protein of unknown function (DUF1302) - - - 6.452e-282 883.0
BYD3_k127_2954630_10 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 398.0
BYD3_k127_2954630_11 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 394.0
BYD3_k127_2954630_12 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000384 377.0
BYD3_k127_2954630_13 Amino acid synthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 350.0
BYD3_k127_2954630_14 Belongs to the GST superfamily K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 345.0
BYD3_k127_2954630_15 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001309 281.0
BYD3_k127_2954630_16 Oxidative deamination of D-amino acids K00285 - 1.4.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004293 279.0
BYD3_k127_2954630_17 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001084 260.0
BYD3_k127_2954630_18 NADPH-dependent FMN reductase K19784 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001639 252.0
BYD3_k127_2954630_19 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000007761 245.0
BYD3_k127_2954630_2 Protein of unknown function (DUF1329) - - - 1.19e-256 797.0
BYD3_k127_2954630_20 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000002023 219.0
BYD3_k127_2954630_21 NIPSNAP - - - 0.0000000000000000000000000000001243 138.0
BYD3_k127_2954630_3 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 5.631e-254 789.0
BYD3_k127_2954630_4 Catalyzes the insertion of one atom of molecular oxygen into position 2 of the phenyl ring of 3-(3- hydroxyphenyl)propionate (3-HPP) and hydroxycinnamic acid (3HCI) K05712 - 1.14.13.127 1.328e-245 773.0
BYD3_k127_2954630_5 Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 1.984e-214 679.0
BYD3_k127_2954630_6 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 549.0
BYD3_k127_2954630_7 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 442.0
BYD3_k127_2954630_8 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 410.0
BYD3_k127_2954630_9 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 411.0
BYD3_k127_2956603_0 AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0 1104.0
BYD3_k127_2956603_1 general secretion pathway protein K02453 - - 5.468e-294 936.0
BYD3_k127_2956603_10 PFAM General secretion pathway, M protein K02462 - - 0.000000000000000000000000000007703 135.0
BYD3_k127_2956603_11 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000001888 109.0
BYD3_k127_2956603_12 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0001071 44.0
BYD3_k127_2956603_2 TIGRFAM general secretory pathway protein E K02454,K02652 - - 7.344e-249 773.0
BYD3_k127_2956603_3 general secretion pathway protein K02455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 579.0
BYD3_k127_2956603_4 PFAM ATPase family associated with various cellular activities (AAA) K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008896 543.0
BYD3_k127_2956603_5 5'-nucleotidase K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 490.0
BYD3_k127_2956603_6 ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008184 468.0
BYD3_k127_2956603_7 PFAM Cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 364.0
BYD3_k127_2956603_8 General secretion pathway K02461 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 340.0
BYD3_k127_2956603_9 Type II secretion system (T2SS), protein N K02463 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 344.0
BYD3_k127_2980976_0 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0 1783.0
BYD3_k127_2980976_1 Dehydrogenase K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 2.11e-255 795.0
BYD3_k127_2980976_2 AFG1-like ATPase K06916 - - 1.815e-198 637.0
BYD3_k127_2980976_3 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 8.989e-195 615.0
BYD3_k127_2980976_4 - - - - 0.000000000000000000000000000003446 125.0
BYD3_k127_2980976_5 - - - - 0.000000005324 64.0
BYD3_k127_2994001_0 Domain of unknown function (DUF296) K06934 - - 0.00000000000000000000000000000000000000000000000000000008299 202.0
BYD3_k127_2994001_1 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000001003 128.0
BYD3_k127_2994001_2 acetylesterase activity - - - 0.000000000000000006936 95.0
BYD3_k127_2994001_3 PXPV repeat (3 copies) - - - 0.0002418 49.0
BYD3_k127_2994001_4 Belongs to the peptidase S41A family K03797 GO:0003674,GO:0003824,GO:0004175,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009653,GO:0009987,GO:0016787,GO:0019538,GO:0023052,GO:0030154,GO:0030288,GO:0030313,GO:0030435,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043603,GO:0043900,GO:0043902,GO:0043934,GO:0044237,GO:0044238,GO:0044464,GO:0046983,GO:0048518,GO:0048522,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0140096,GO:1900190,GO:1900192,GO:1901564 3.4.21.102 0.0002741 50.0
BYD3_k127_3011824_0 Mandelate Racemase Muconate Lactonizing K01781,K20023,K20549 - 4.2.1.156,4.2.1.42,5.1.2.2,5.5.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 476.0
BYD3_k127_3011824_1 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007804 270.0
BYD3_k127_3011824_2 KDPG and KHG aldolase K01625,K01631 - 4.1.2.14,4.1.2.21,4.1.3.42 0.0000000000000000000000000000000000000000000000000000000028 206.0
BYD3_k127_3011824_3 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000000000002221 194.0
BYD3_k127_3011824_4 DoxX family K15977 - - 0.00000000000000000000000000000000000000000000002095 174.0
BYD3_k127_3031582_0 PAS fold - - - 1.641e-212 693.0
BYD3_k127_3031582_1 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 517.0
BYD3_k127_3031925_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 577.0
BYD3_k127_3031925_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 323.0
BYD3_k127_3031925_2 Protein of unknown function (DUF861) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001636 273.0
BYD3_k127_3031925_3 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000002433 175.0
BYD3_k127_3031925_4 Bacterial extracellular solute-binding protein - - - 0.0000000000000000000000000000000000000000009596 160.0
BYD3_k127_3031925_5 - - - - 0.00000000000000008308 82.0
BYD3_k127_3031925_6 PFAM Glycosyl transferase, family 2 K00786 - - 0.0000000000000003292 78.0
BYD3_k127_3031925_7 PFAM transposase, IS4 family protein K07487 - - 0.00000000006874 63.0
BYD3_k127_3036667_0 GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008516 489.0
BYD3_k127_3036667_1 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 493.0
BYD3_k127_3036667_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 429.0
BYD3_k127_3062720_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 600.0
BYD3_k127_3062720_1 AAA domain K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 552.0
BYD3_k127_3062720_2 AAA domain K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004786 445.0
BYD3_k127_3062720_3 Helix-turn-helix type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006029 428.0
BYD3_k127_3062720_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 333.0
BYD3_k127_3069787_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1241.0
BYD3_k127_3069787_1 Phosphate acetyl butaryl transferase K00029 - 1.1.1.40 0.0 1095.0
BYD3_k127_3069787_10 2-hydroxyacid dehydrogenase K12972 - 1.1.1.79,1.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008313 379.0
BYD3_k127_3069787_11 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 349.0
BYD3_k127_3069787_12 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 344.0
BYD3_k127_3069787_13 Barstar (barnase inhibitor) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 326.0
BYD3_k127_3069787_14 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007278 249.0
BYD3_k127_3069787_15 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000006474 235.0
BYD3_k127_3069787_16 Phosphate acetyl butaryl transferase K00029 - 1.1.1.40 0.00000000000000000000000000000000000000000000000000000000001775 214.0
BYD3_k127_3069787_17 Biopolymer transport protein K03559,K03560 - - 0.0000000000000000000000000000000000000000000000000000000001703 208.0
BYD3_k127_3069787_18 Ribonuclease K01167 - 3.1.27.3 0.0000000000000000000000000000000000000000000000000000002266 197.0
BYD3_k127_3069787_19 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000006622 194.0
BYD3_k127_3069787_2 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 2.207e-297 935.0
BYD3_k127_3069787_20 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00000000000000000000000000000000000000000000000000001881 194.0
BYD3_k127_3069787_21 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.00000000000000000000000000000000000000000000000003123 183.0
BYD3_k127_3069787_22 IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.000000000000001533 76.0
BYD3_k127_3069787_3 Peptidase dimerisation domain - - - 6.452e-255 790.0
BYD3_k127_3069787_4 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005727 577.0
BYD3_k127_3069787_5 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 568.0
BYD3_k127_3069787_6 Phosphotransferase K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 525.0
BYD3_k127_3069787_7 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 505.0
BYD3_k127_3069787_8 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 402.0
BYD3_k127_3069787_9 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006318 426.0
BYD3_k127_3078109_0 MotA/TolQ/ExbB proton channel family K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 496.0
BYD3_k127_3078109_1 Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 341.0
BYD3_k127_3078109_2 Metal dependent phosphohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006746 289.0
BYD3_k127_3078109_3 Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02403 - - 0.000000000000000000000000000000000000000000000001835 177.0
BYD3_k127_3078109_4 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000001607 184.0
BYD3_k127_3078109_7 Integrating conjugative element protein - - - 0.000255 47.0
BYD3_k127_3087068_0 Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide K01426,K01455 - 3.5.1.4,3.5.1.49 3.179e-196 614.0
BYD3_k127_3087068_1 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008785 587.0
BYD3_k127_3087068_2 UPF0761 membrane protein K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 522.0
BYD3_k127_3087068_3 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 501.0
BYD3_k127_3087068_4 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 459.0
BYD3_k127_3087068_5 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 458.0
BYD3_k127_3087068_6 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 433.0
BYD3_k127_3087068_7 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 415.0
BYD3_k127_3087068_8 Predicted membrane protein (DUF2069) - - - 0.00000000000000000000000000003786 122.0
BYD3_k127_3087068_9 FAD linked oxidases, C-terminal domain - - - 0.00000000000000000000000002959 115.0
BYD3_k127_3087713_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1292.0
BYD3_k127_3087713_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 330.0
BYD3_k127_3087713_2 FMN binding - - - 0.000000000000000000000000000000000000000004572 166.0
BYD3_k127_3087713_3 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.00000000000000000000000000000000000000001224 154.0
BYD3_k127_3087713_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000001673 63.0
BYD3_k127_3090109_0 Bacterial protein of unknown function (DUF899) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 396.0
BYD3_k127_3090109_1 Glutamine cyclotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 368.0
BYD3_k127_3090109_2 RESPONSE REGULATOR receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003975 328.0
BYD3_k127_3090109_3 transcriptional regulator - GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009108 326.0
BYD3_k127_3090109_4 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000005095 258.0
BYD3_k127_3090109_5 - - - - 0.000000000000000000007387 94.0
BYD3_k127_3090109_6 Integrating conjugative element protein - - - 0.0001211 45.0
BYD3_k127_3116922_0 PFAM Aminotransferase class I and II K14287 - 2.6.1.88 7.349e-205 659.0
BYD3_k127_3116922_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 7.889e-202 639.0
BYD3_k127_3116922_10 - - - - 0.000000288 61.0
BYD3_k127_3116922_11 PFAM response regulator receiver K02482 - 2.7.13.3 0.0008835 45.0
BYD3_k127_3116922_2 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 3.349e-199 625.0
BYD3_k127_3116922_3 transcriptional regulator K13634 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007878 517.0
BYD3_k127_3116922_4 Permease, YjgP YjgQ K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007341 513.0
BYD3_k127_3116922_5 Permease, YjgP YjgQ K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 516.0
BYD3_k127_3116922_6 plastoquinol--plastocyanin reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000002803 221.0
BYD3_k127_3116922_7 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.000000000000000000000000000000000000002632 152.0
BYD3_k127_3116922_8 CbiX K03795 - 4.99.1.3 0.000000000000000000000000000000000001755 145.0
BYD3_k127_3116922_9 PAS domain - - - 0.0000000000000000000000000002484 131.0
BYD3_k127_3117420_0 Protein of unknown function (DUF1298) - - - 2.254e-219 697.0
BYD3_k127_3117420_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 6.158e-211 662.0
BYD3_k127_3117420_10 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 342.0
BYD3_k127_3117420_11 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002742 257.0
BYD3_k127_3117420_12 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) - - - 0.0000000000000000000000000000000000000000000003016 170.0
BYD3_k127_3117420_13 Belongs to the BolA IbaG family - - - 0.000000000000000000000000000000000000699 142.0
BYD3_k127_3117420_14 acyl-coA-binding protein - - - 0.000000000000000000000000000000001817 142.0
BYD3_k127_3117420_15 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000002591 98.0
BYD3_k127_3117420_16 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000001225 51.0
BYD3_k127_3117420_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 2.531e-209 670.0
BYD3_k127_3117420_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 527.0
BYD3_k127_3117420_4 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 497.0
BYD3_k127_3117420_5 Putative aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005984 457.0
BYD3_k127_3117420_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000407 426.0
BYD3_k127_3117420_7 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005362 411.0
BYD3_k127_3117420_8 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 340.0
BYD3_k127_3117420_9 Bacterial transcriptional repressor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 340.0
BYD3_k127_3130537_0 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 7.495e-249 797.0
BYD3_k127_3130537_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 2.931e-228 712.0
BYD3_k127_3130537_10 Protein of unknown function (DUF1223) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001067 259.0
BYD3_k127_3130537_11 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005306 250.0
BYD3_k127_3130537_12 Protein of unknown function (DUF3717) K06938 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003497 252.0
BYD3_k127_3130537_13 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000001766 209.0
BYD3_k127_3130537_14 Right handed beta helix region - - - 0.00000000000000000000000000000000000000000000000002587 202.0
BYD3_k127_3130537_15 Peptidyl-prolyl cis-trans K03774 - 5.2.1.8 0.0000000000000000000000000000000000000000000000002043 193.0
BYD3_k127_3130537_16 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000002868 183.0
BYD3_k127_3130537_17 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000000000000002172 165.0
BYD3_k127_3130537_18 - - - - 0.00000000000000000000000000000000000000004557 162.0
BYD3_k127_3130537_19 Heavy-metal resistance - - - 0.00000000000000000000000000000000006297 143.0
BYD3_k127_3130537_2 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 2.636e-194 614.0
BYD3_k127_3130537_20 Cold shock protein K03704 - - 0.00000000000000000000000000000001402 128.0
BYD3_k127_3130537_21 protein conserved in bacteria - - - 0.00000000000000000000001964 110.0
BYD3_k127_3130537_22 - - - - 0.0000000003165 62.0
BYD3_k127_3130537_23 - - - - 0.0000008634 55.0
BYD3_k127_3130537_3 MatE K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 578.0
BYD3_k127_3130537_4 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 539.0
BYD3_k127_3130537_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006238 529.0
BYD3_k127_3130537_6 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009832 465.0
BYD3_k127_3130537_7 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 399.0
BYD3_k127_3130537_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 317.0
BYD3_k127_3130537_9 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 308.0
BYD3_k127_3162695_0 Uncharacterized protein conserved in bacteria (DUF2090) K03338 - 2.7.1.92 5.945e-277 878.0
BYD3_k127_3162695_1 Extracellular ligand-binding receptor K01999 - - 7.46e-232 722.0
BYD3_k127_3162695_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009593 509.0
BYD3_k127_3162695_3 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008074 321.0
BYD3_k127_3162695_4 Sugar isomerase (SIS) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 292.0
BYD3_k127_3182184_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1080.0
BYD3_k127_3182184_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 3.648e-199 628.0
BYD3_k127_3182184_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007452 507.0
BYD3_k127_3182184_3 FCD K11474,K14348 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007567 373.0
BYD3_k127_3191414_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007984 509.0
BYD3_k127_3191414_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009962 485.0
BYD3_k127_3191414_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K18030 - 1.17.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 387.0
BYD3_k127_3191414_3 Major facilitator superfamily K08166,K08167 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 360.0
BYD3_k127_3191414_4 COG0642 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 359.0
BYD3_k127_3191414_5 Protein of unknown function (DUF3574) - - - 0.0000000000000000000000001028 115.0
BYD3_k127_3191414_6 cheY-homologous receiver domain K03413 - - 0.000000000000000000001174 100.0
BYD3_k127_3191414_7 Arac family - - - 0.0000000000007743 72.0
BYD3_k127_3191414_8 Acetyltransferases including N-acetylases of ribosomal proteins - - - 0.000000005495 66.0
BYD3_k127_3214424_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1245.0
BYD3_k127_3214424_1 Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 531.0
BYD3_k127_3214424_2 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 512.0
BYD3_k127_3214424_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 400.0
BYD3_k127_3214424_4 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000001015 173.0
BYD3_k127_3214424_5 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000000000000005845 152.0
BYD3_k127_3214424_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000001903 134.0
BYD3_k127_3214424_7 Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000000007527 128.0
BYD3_k127_3238052_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 3.467e-306 946.0
BYD3_k127_3238052_1 Receptor family ligand binding region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006439 550.0
BYD3_k127_3247986_0 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 3.323e-201 654.0
BYD3_k127_3248268_0 DNA polymerase X family K02347 - - 5.455e-216 685.0
BYD3_k127_3248268_1 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 401.0
BYD3_k127_3248268_2 Predicted periplasmic lipoprotein (DUF2279) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008724 325.0
BYD3_k127_3248268_3 HlyD family secretion protein K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 300.0
BYD3_k127_3248268_4 phosphoribosyltransferase K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000835 219.0
BYD3_k127_3248268_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000001914 168.0
BYD3_k127_3248268_6 - - - - 0.00000000000000000000000164 107.0
BYD3_k127_3259588_0 TIGRFAM O-acetylhomoserine O-acetylserine sulfhydrylase K01740 - 2.5.1.49 9.654e-235 732.0
BYD3_k127_3259588_1 GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000556 618.0
BYD3_k127_3259588_2 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001615 252.0
BYD3_k127_3259588_3 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000001981 207.0
BYD3_k127_3264855_0 Transcriptional regulator - - - 8.454e-253 798.0
BYD3_k127_3264855_1 Sulfate transporter antisigma-factor antagonist STAS K03321 - - 6.831e-219 697.0
BYD3_k127_3264855_10 - - - - 0.0000000000000000000000000002915 126.0
BYD3_k127_3264855_2 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 451.0
BYD3_k127_3264855_3 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 434.0
BYD3_k127_3264855_4 luxR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008138 363.0
BYD3_k127_3264855_5 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 343.0
BYD3_k127_3264855_6 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 303.0
BYD3_k127_3264855_7 pyridoxamine 5'-phosphate oxidase-related K07006 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000364 248.0
BYD3_k127_3264855_8 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000002255 234.0
BYD3_k127_3264855_9 Protein of unknown function (DUF3455) - - - 0.00000000000000000000000000000000000000000000001124 176.0
BYD3_k127_3286388_0 GDP-mannose 4,6 dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 374.0
BYD3_k127_3286388_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 347.0
BYD3_k127_3286388_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002717 270.0
BYD3_k127_3286388_3 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000001663 257.0
BYD3_k127_3286388_4 Protein of unknown function (DUF962) - - - 0.000000000000000000000000000000000000000000000000000004241 193.0
BYD3_k127_3286388_5 - - - - 0.0000543 48.0
BYD3_k127_3287505_0 Evidence 4 Homologs of previously reported genes of - - - 2.312e-248 784.0
BYD3_k127_3287505_1 TIGRFAM cation diffusion facilitator family transporter K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 312.0
BYD3_k127_3287505_2 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 304.0
BYD3_k127_3287505_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003882 276.0
BYD3_k127_3287505_4 Transcriptional regulator K03892 - - 0.00000000000000000000000000000000000000000004809 162.0
BYD3_k127_3287505_5 Sodium Bile acid symporter family K03325 - - 0.0000000000009871 68.0
BYD3_k127_3300820_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0 1008.0
BYD3_k127_3300820_1 Major facilitator superfamily K05939 - 2.3.1.40,6.2.1.20 0.0 1006.0
BYD3_k127_3300820_10 - - - - 0.0000000001173 63.0
BYD3_k127_3300820_2 Radical SAM superfamily K06937 - - 1.816e-218 689.0
BYD3_k127_3300820_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 3.405e-199 633.0
BYD3_k127_3300820_4 transcriptional regulator K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006492 546.0
BYD3_k127_3300820_5 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009023 512.0
BYD3_k127_3300820_6 Uncharacterized protein conserved in bacteria (DUF2145) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 363.0
BYD3_k127_3300820_7 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 299.0
BYD3_k127_3300820_8 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003748 252.0
BYD3_k127_3300820_9 - - - - 0.000000000000000000000000114 113.0
BYD3_k127_3312085_0 Glucose / Sorbosone dehydrogenase - - - 7.766e-231 720.0
BYD3_k127_3312085_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 320.0
BYD3_k127_3312085_2 Gram-negative porin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001206 269.0
BYD3_k127_3312085_3 Member of a two-component regulatory system K07644 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000001177 273.0
BYD3_k127_3312085_4 Domain of unknown function (DUF4148) - - - 0.0000000000000000001267 95.0
BYD3_k127_3316025_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 531.0
BYD3_k127_3316025_1 Methionine aminopeptidase K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009753 326.0
BYD3_k127_3316025_2 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000007358 157.0
BYD3_k127_3332755_0 Putative diguanylate phosphodiesterase - - - 3.535e-270 844.0
BYD3_k127_3332755_1 signal transduction protein containing EAL and modified HD-GYP domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 423.0
BYD3_k127_3332755_2 histidine kinase A domain protein - - - 0.000000000000000006621 89.0
BYD3_k127_3332924_0 Signal transducing histidine kinase, homodimeric domain K02487,K06596 - - 0.0 2219.0
BYD3_k127_3332924_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1566.0
BYD3_k127_3332924_10 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000000000000000000000401 203.0
BYD3_k127_3332924_2 Amidohydrolase family K01465 - 3.5.2.3 1.298e-213 670.0
BYD3_k127_3332924_3 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009605 594.0
BYD3_k127_3332924_4 Type IV pili methyl-accepting chemotaxis transducer N-term K02660 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 539.0
BYD3_k127_3332924_5 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 424.0
BYD3_k127_3332924_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 421.0
BYD3_k127_3332924_7 Platelet-activating factor acetylhydrolase plasma intracellular isoform II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 369.0
BYD3_k127_3332924_8 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008894 323.0
BYD3_k127_3332924_9 uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000008845 235.0
BYD3_k127_3338828_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 572.0
BYD3_k127_3338828_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 293.0
BYD3_k127_3338828_2 riboflavin synthase, alpha K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000005813 257.0
BYD3_k127_3338828_3 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000008568 220.0
BYD3_k127_3338828_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000000000000000002683 201.0
BYD3_k127_3339561_0 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 5.286e-277 867.0
BYD3_k127_3339561_1 NMT1-like family K02051,K15576 - - 9.78e-260 807.0
BYD3_k127_3339561_10 signal peptide protein - - - 0.00000000461 58.0
BYD3_k127_3339561_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007123 541.0
BYD3_k127_3339561_3 PFAM aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 497.0
BYD3_k127_3339561_4 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008883 369.0
BYD3_k127_3339561_5 Binding-protein-dependent transport system inner membrane component K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 361.0
BYD3_k127_3339561_6 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 321.0
BYD3_k127_3339561_7 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009352 274.0
BYD3_k127_3339561_8 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000001925 234.0
BYD3_k127_3339561_9 COG1793 ATP-dependent DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000004946 209.0
BYD3_k127_3349084_0 D-galactarate dehydratase Altronate hydrolase K01685,K16846 - 4.2.1.7,4.4.1.24 6.95e-276 854.0
BYD3_k127_3349084_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 4.396e-200 627.0
BYD3_k127_3349084_10 - - - - 0.00000000000000000000000000000000000000000002601 166.0
BYD3_k127_3349084_11 Domain of unknown function (DUF4154) - - - 0.0000000000000000002255 98.0
BYD3_k127_3349084_2 PFAM EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K00790 - 2.5.1.7 9.287e-198 627.0
BYD3_k127_3349084_3 Flavin-binding monooxygenase-like K03379 - 1.14.13.22 4.657e-194 620.0
BYD3_k127_3349084_4 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 507.0
BYD3_k127_3349084_5 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-17-dioic acid hydratase (catechol pathway) K18336 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 478.0
BYD3_k127_3349084_6 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 486.0
BYD3_k127_3349084_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006877 449.0
BYD3_k127_3349084_8 Short-chain dehydrogenase reductase sdr K18335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008151 314.0
BYD3_k127_3349084_9 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001394 280.0
BYD3_k127_3352938_0 ABC1 family K03688 - - 3.227e-249 780.0
BYD3_k127_3352938_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000000000000001149 235.0
BYD3_k127_3352938_2 AsmA family - - - 0.0000000000000000000000009596 107.0
BYD3_k127_3352938_3 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0000000008662 59.0
BYD3_k127_3357496_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1114.0
BYD3_k127_3357496_1 PAP2 superfamily K19302 - 3.6.1.27 3.217e-269 843.0
BYD3_k127_3357496_10 Peptidase family U32 K08303 - - 0.000000000000004969 81.0
BYD3_k127_3357496_11 Reversible hydration of carbon dioxide K01673 GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0008150,GO:0008270,GO:0015976,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0046872,GO:0046914 4.2.1.1 0.000000005478 61.0
BYD3_k127_3357496_2 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress K05916,K07006,K21832 - 1.14.12.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 561.0
BYD3_k127_3357496_3 Class III cytochrome C family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 445.0
BYD3_k127_3357496_4 Reversible hydration of carbon dioxide K01673 GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0008150,GO:0008270,GO:0015976,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0046872,GO:0046914 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008855 384.0
BYD3_k127_3357496_5 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 333.0
BYD3_k127_3357496_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005839 294.0
BYD3_k127_3357496_7 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000002639 238.0
BYD3_k127_3357496_8 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000002927 185.0
BYD3_k127_3357496_9 nitrate reductase, gamma subunit K00374 - 1.7.5.1 0.000000000000000000000000001034 114.0
BYD3_k127_3381083_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005361 578.0
BYD3_k127_3381083_1 MreB/Mbl protein K04046 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002446 258.0
BYD3_k127_3381083_2 Two component transcriptional regulator K02483,K07659 - - 0.000000000000000000000000000000000000000000000000000000000000000001776 234.0
BYD3_k127_3381083_3 histidine kinase HAMP region domain protein K07638 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000004501 221.0
BYD3_k127_3381083_4 Zinc-finger domain - - - 0.0000000000000000000000000002749 123.0
BYD3_k127_3381083_6 - - - - 0.0000000000000000282 84.0
BYD3_k127_3381083_7 - - - - 0.0000001745 61.0
BYD3_k127_3388710_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1566.0
BYD3_k127_3388710_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0 1034.0
BYD3_k127_3388710_10 Pfam:DUF1049 K08992 - - 0.00000000000000000000000000000000001785 137.0
BYD3_k127_3388710_11 Belongs to the ompA family K03286 - - 0.000000000000000000000003094 108.0
BYD3_k127_3388710_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 1.368e-296 944.0
BYD3_k127_3388710_3 chorismate mutase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 602.0
BYD3_k127_3388710_4 prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004102 513.0
BYD3_k127_3388710_5 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 477.0
BYD3_k127_3388710_6 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 463.0
BYD3_k127_3388710_7 lipopolysaccharide heptosyltransferase I K02841,K12982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 347.0
BYD3_k127_3388710_8 Protein of unknown function (DUF4254) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 299.0
BYD3_k127_3388710_9 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.000000000000000000000000000000000000000000002055 187.0
BYD3_k127_3397125_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 0.0 1907.0
BYD3_k127_3397125_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1131.0
BYD3_k127_3397125_10 RNA polymerase sigma K03087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005147 367.0
BYD3_k127_3397125_11 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 342.0
BYD3_k127_3397125_12 Belongs to the BI1 family K19416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005748 346.0
BYD3_k127_3397125_13 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002104 262.0
BYD3_k127_3397125_14 peptidase K06194 - - 0.00000000000000000000000000000000000000000000000000000000000001216 217.0
BYD3_k127_3397125_15 CRS1_YhbY K07574 - - 0.000000000000000000000000000000000000000000000000000000002081 204.0
BYD3_k127_3397125_2 AMP-dependent synthetase and ligase K01897 - 6.2.1.3 6.606e-314 972.0
BYD3_k127_3397125_3 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 6.393e-225 704.0
BYD3_k127_3397125_4 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 5.068e-212 667.0
BYD3_k127_3397125_5 Belongs to the CarA family K01956 - 6.3.5.5 1.483e-203 638.0
BYD3_k127_3397125_6 Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 615.0
BYD3_k127_3397125_7 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 471.0
BYD3_k127_3397125_8 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004174 402.0
BYD3_k127_3397125_9 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 372.0
BYD3_k127_3398722_0 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K07303 - 1.3.99.16 1.026e-254 797.0
BYD3_k127_3398722_1 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 431.0
BYD3_k127_3398722_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 298.0
BYD3_k127_3398722_3 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 284.0
BYD3_k127_3404583_0 type II secretion system protein E K02454 - - 1.259e-313 969.0
BYD3_k127_3404583_1 ATPase associated with various cellular activities, AAA_3 K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005155 378.0
BYD3_k127_3404583_2 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 376.0
BYD3_k127_3404583_3 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 391.0
BYD3_k127_3404583_4 Spermidine synthase K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004627 326.0
BYD3_k127_3412264_0 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 606.0
BYD3_k127_3412264_1 Domain of unknown function (DUF4394) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007439 524.0
BYD3_k127_3412264_10 Probable zinc-ribbon domain - - - 0.00000000000000000000000000001169 126.0
BYD3_k127_3412264_2 MatE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 431.0
BYD3_k127_3412264_3 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 417.0
BYD3_k127_3412264_4 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009831 308.0
BYD3_k127_3412264_5 Protein of unknown function (DUF1348) K09958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 286.0
BYD3_k127_3412264_6 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000211 221.0
BYD3_k127_3412264_7 cytochrome - - - 0.00000000000000000000000000000000000000000000000002648 200.0
BYD3_k127_3412264_8 COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system - - - 0.000000000000000000000000000000000009461 150.0
BYD3_k127_3412264_9 - - - - 0.00000000000000000000000000000000001674 140.0
BYD3_k127_3412366_0 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 570.0
BYD3_k127_3412366_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005971 495.0
BYD3_k127_3412366_2 PFAM intradiol ring-cleavage dioxygenase K03381,K04098,K15253 - 1.13.11.1,1.13.11.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 417.0
BYD3_k127_3412366_3 LysR substrate binding domain K11921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006475 364.0
BYD3_k127_3412366_4 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 351.0
BYD3_k127_3412366_5 enoyl-CoA hydratase isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 287.0
BYD3_k127_3419783_0 Histidine kinase-like ATPases - - - 2.795e-254 806.0
BYD3_k127_3419783_1 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 416.0
BYD3_k127_3423001_0 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 502.0
BYD3_k127_3423001_1 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 389.0
BYD3_k127_3423001_2 glyoxalase bleomycin resistance protein dioxygenase K06996 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000001048 156.0
BYD3_k127_3423001_3 Polymer-forming cytoskeletal - - - 0.0000001494 62.0
BYD3_k127_3438359_0 Periplasmic binding protein K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 505.0
BYD3_k127_3438359_1 cobalamin synthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 333.0
BYD3_k127_3438359_2 ATPases associated with a variety of cellular activities K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004986 299.0
BYD3_k127_3438359_3 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002063 270.0
BYD3_k127_3438359_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000001003 192.0
BYD3_k127_3438359_5 Amidohydrolase family - - - 0.000000000000000000000000000000001391 131.0
BYD3_k127_3456934_0 SMART alpha amylase, catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.0 1681.0
BYD3_k127_3456934_1 PFAM glycoside hydrolase, family 13 domain protein K01214,K02438 - 3.2.1.196,3.2.1.68 9.491e-298 951.0
BYD3_k127_3456934_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 3.088e-287 894.0
BYD3_k127_3456934_3 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 1.805e-267 863.0
BYD3_k127_3456934_4 trehalohydrolase K01236 - 3.2.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 539.0
BYD3_k127_3456934_5 PFAM Conserved TM helix repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 299.0
BYD3_k127_3456934_6 Cupin - - - 0.0000000000000000000000000000000000000000002818 160.0
BYD3_k127_3458254_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 1.623e-277 870.0
BYD3_k127_3458254_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006111 520.0
BYD3_k127_3458254_2 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 347.0
BYD3_k127_3458254_3 ATPase activity K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008778 314.0
BYD3_k127_3458254_4 ABC-2 family transporter protein K01992,K13926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 300.0
BYD3_k127_3458254_5 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003709 270.0
BYD3_k127_3458254_6 ABC-2 type transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001142 286.0
BYD3_k127_3458254_7 Nicotinamidase K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000000000000000000002525 227.0
BYD3_k127_3458254_8 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000004575 140.0
BYD3_k127_3465955_0 ABC transporter transmembrane region K06147,K18893 - - 2.175e-298 926.0
BYD3_k127_3465955_1 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 526.0
BYD3_k127_3465955_10 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000000001783 199.0
BYD3_k127_3465955_11 Protein of unknown function (DUF3016) - - - 0.00000000000000000000000000001448 124.0
BYD3_k127_3465955_2 glutaminyl-tRNA synthetase K01886 - 6.1.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 509.0
BYD3_k127_3465955_3 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 333.0
BYD3_k127_3465955_4 Formyl transferase K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000316 263.0
BYD3_k127_3465955_5 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000003726 251.0
BYD3_k127_3465955_6 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000002285 220.0
BYD3_k127_3465955_7 PFAM lipolytic protein G-D-S-L family K01073 - 3.1.2.20 0.000000000000000000000000000000000000000000000000000000000001943 226.0
BYD3_k127_3465955_8 FKBP-type peptidyl-prolyl cis-trans isomerase K03772,K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000003298 208.0
BYD3_k127_3465955_9 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000008728 198.0
BYD3_k127_3466210_0 Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and or methyl galactoside import. Responsible for energy coupling to the transport system K10441,K10548 - 3.6.3.17 2.569e-249 783.0
BYD3_k127_3466210_1 Periplasmic binding protein domain K10543,K10546 - - 8.387e-198 619.0
BYD3_k127_3466210_2 Belongs to the binding-protein-dependent transport system permease family K10547 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000865 600.0
BYD3_k127_3466210_3 Belongs to the DapA family K01714,K13876 - 4.2.1.43,4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 488.0
BYD3_k127_3466210_4 Belongs to the IlvD Edd family K13875 - 4.2.1.25 0.0000000000000000000003102 96.0
BYD3_k127_3466548_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 2.078e-220 690.0
BYD3_k127_3466548_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 472.0
BYD3_k127_3466548_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 469.0
BYD3_k127_3466548_3 Transcriptional regulator, AraC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 429.0
BYD3_k127_3466548_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 407.0
BYD3_k127_3466548_5 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 398.0
BYD3_k127_3466548_6 Protein of unknown function (DUF962) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003661 264.0
BYD3_k127_3466548_7 AAA domain K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000002203 243.0
BYD3_k127_3466548_8 AAA domain K01996 - - 0.000000000000000000000000000000000000000000000004024 174.0
BYD3_k127_3466548_9 Belongs to the aldehyde dehydrogenase family K00141 - 1.2.1.28 0.0000000000000000000000000000000001456 137.0
BYD3_k127_3477911_0 Ftsk_gamma K03466 - - 0.0 1140.0
BYD3_k127_3477911_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 5.82e-234 734.0
BYD3_k127_3477911_10 Transcriptional regulator, Crp Fnr family K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 395.0
BYD3_k127_3477911_11 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 374.0
BYD3_k127_3477911_12 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008676 365.0
BYD3_k127_3477911_13 2OG-Fe dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000092 339.0
BYD3_k127_3477911_14 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 327.0
BYD3_k127_3477911_15 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002513 281.0
BYD3_k127_3477911_16 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008127 299.0
BYD3_k127_3477911_17 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000001853 272.0
BYD3_k127_3477911_18 Pseudouridine synthase K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000005154 190.0
BYD3_k127_3477911_19 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000000000000000000000000000000000000009368 152.0
BYD3_k127_3477911_2 PFAM peptidase S10 serine carboxypeptidase - - - 1.14e-217 685.0
BYD3_k127_3477911_20 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000000000009769 102.0
BYD3_k127_3477911_21 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.00001852 57.0
BYD3_k127_3477911_3 Fatty acid desaturase K00507 - 1.14.19.1 9.542e-200 629.0
BYD3_k127_3477911_4 Biotin carboxylase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394 616.0
BYD3_k127_3477911_5 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007644 568.0
BYD3_k127_3477911_6 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005743 554.0
BYD3_k127_3477911_7 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009762 548.0
BYD3_k127_3477911_8 Catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 437.0
BYD3_k127_3477911_9 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006318 409.0
BYD3_k127_3483824_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 2.504e-208 661.0
BYD3_k127_3483824_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5,6.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 539.0
BYD3_k127_3483824_10 Universal stress protein family - - - 0.00000000000000000000000000000004382 130.0
BYD3_k127_3483824_2 PFAM Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 434.0
BYD3_k127_3483824_3 phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 429.0
BYD3_k127_3483824_4 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 379.0
BYD3_k127_3483824_5 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005964 367.0
BYD3_k127_3483824_6 PFAM Integral membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 345.0
BYD3_k127_3483824_7 PFAM Protein kinase K11912,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000005612 248.0
BYD3_k127_3483824_8 Modulates RecA activity K03565 - - 0.000000000000000000000000000000000000000005071 158.0
BYD3_k127_3483824_9 Belongs to the N-Me-Phe pilin family K02650,K02655 - - 0.000000000000000000000000000000006811 132.0
BYD3_k127_3506405_0 Fructose-bisphosphate aldolase class-I K01623 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 505.0
BYD3_k127_3506405_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 352.0
BYD3_k127_3506405_2 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004144 358.0
BYD3_k127_3506405_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000001625 144.0
BYD3_k127_3532486_0 AMP-binding enzyme K12508 - 6.2.1.34 3.219e-301 934.0
BYD3_k127_3532486_1 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 6.791e-280 870.0
BYD3_k127_3532486_2 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 592.0
BYD3_k127_3532486_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 471.0
BYD3_k127_3532486_4 Thioesterase-like superfamily K01075 - 3.1.2.23 0.000000000000000000000000000000000000000000000000000000000000000000002309 239.0
BYD3_k127_3532486_5 PFAM ABC transporter K01996 - - 0.000000000000000000000000000000000000000003017 168.0
BYD3_k127_3532486_6 Enoyl-CoA hydratase/isomerase K20036 - 4.2.1.155 0.0000000001998 61.0
BYD3_k127_3598812_0 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 0.0 1013.0
BYD3_k127_3598812_1 Belongs to the ABC transporter superfamily K02031,K02032,K10823,K13896,K15583 - - 3.189e-284 881.0
BYD3_k127_3598812_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000448 256.0
BYD3_k127_3598812_11 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002107 259.0
BYD3_k127_3598812_12 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004124 244.0
BYD3_k127_3598812_13 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.00000000000000000000000000000000000000000000000000001301 190.0
BYD3_k127_3598812_14 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000002339 196.0
BYD3_k127_3598812_16 Acetyl-coenzyme A transporter 1 K08218 - - 0.000001612 50.0
BYD3_k127_3598812_2 ABC-type dipeptide transport system, periplasmic component - - - 4.371e-283 897.0
BYD3_k127_3598812_3 ABC-type dipeptide transport system, periplasmic component - - - 3.924e-276 859.0
BYD3_k127_3598812_4 ABC-type dipeptide transport system, periplasmic component - - - 1.06e-272 852.0
BYD3_k127_3598812_5 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 8.349e-225 708.0
BYD3_k127_3598812_6 PFAM Xanthine uracil vitamin C permease K02824 - - 1.986e-217 683.0
BYD3_k127_3598812_7 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 554.0
BYD3_k127_3598812_8 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 529.0
BYD3_k127_3598812_9 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005365 279.0
BYD3_k127_3599056_0 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 6.939e-308 951.0
BYD3_k127_3599056_1 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 433.0
BYD3_k127_3599056_2 Cytochrome c K17223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 313.0
BYD3_k127_3599056_3 Cytochrome c, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000009409 241.0
BYD3_k127_3599056_4 Flavocytochrome c sulphide dehydrogenase, flavin-binding K05301,K17218 - 1.8.2.1,1.8.5.4 0.00000000000000000000000000000000000000000000322 166.0
BYD3_k127_3599056_5 PFAM Sulphur oxidation protein SoxZ K17227 - - 0.00000000000000005442 80.0
BYD3_k127_3616874_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1128.0
BYD3_k127_3616874_1 Polyhydroxyalkanoate depolymerase, intracellular K05973 - 3.1.1.75 2.808e-228 713.0
BYD3_k127_3616874_2 aminotransferase K00832 - 2.6.1.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 565.0
BYD3_k127_3616874_3 Transcriptional regulator K13643 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007385 331.0
BYD3_k127_3616874_4 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 311.0
BYD3_k127_3616874_5 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000002801 180.0
BYD3_k127_3638526_0 Helicase K03657 - 3.6.4.12 0.0 1282.0
BYD3_k127_3638526_1 Bacterial protein of unknown function (DUF839) K07093 - - 2.532e-318 992.0
BYD3_k127_3638526_10 cellulase activity - - - 0.000000000000000000000000000000000000000000000000000000000000005911 232.0
BYD3_k127_3638526_11 sister chromatid segregation - - - 0.000000000000000000000000000000000000000000000000000000000003228 221.0
BYD3_k127_3638526_12 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000000000000000000006233 211.0
BYD3_k127_3638526_13 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000008253 186.0
BYD3_k127_3638526_14 - - - - 0.00000000000000000000000000000000000000000001643 168.0
BYD3_k127_3638526_15 - - - - 0.000000000000000000000000000000009385 147.0
BYD3_k127_3638526_16 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.0000000001592 63.0
BYD3_k127_3638526_17 Glycosyl hydrolase 36 superfamily, catalytic domain K00702,K18675 - 2.4.1.20,2.4.1.280 0.00002829 53.0
BYD3_k127_3638526_2 Cytochrome c7 and related cytochrome c - - - 1.563e-269 853.0
BYD3_k127_3638526_3 heat shock protein binding - - - 3.415e-262 825.0
BYD3_k127_3638526_4 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 621.0
BYD3_k127_3638526_5 cytochrome C K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 549.0
BYD3_k127_3638526_6 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 391.0
BYD3_k127_3638526_7 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 342.0
BYD3_k127_3638526_8 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 289.0
BYD3_k127_3638526_9 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005176 273.0
BYD3_k127_3643470_0 metal-dependent phosphohydrolase HD sub domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 501.0
BYD3_k127_3643470_1 Trypsin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 331.0
BYD3_k127_3643470_2 histidine kinase A domain protein K11527,K20973 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 316.0
BYD3_k127_3645200_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 0.0 1008.0
BYD3_k127_3645200_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 1.9e-322 996.0
BYD3_k127_3645200_2 DNA internalization-related competence protein ComEC Rec2 K02238 - - 4.406e-270 869.0
BYD3_k127_3645200_3 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 598.0
BYD3_k127_3645200_4 Histidine Phosphotransfer domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007379 527.0
BYD3_k127_3645200_5 Circularly permuted ATP-grasp type 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 369.0
BYD3_k127_3645200_6 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000000000000539 240.0
BYD3_k127_3645200_7 bond formation protein DsbB K03611 - - 0.00000000000000000000000000000000000000000004012 165.0
BYD3_k127_3651550_0 alcohol dehydrogenase K19745 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000421 535.0
BYD3_k127_3651550_1 PFAM aldo keto reductase K05882 - 1.1.1.91 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004144 450.0
BYD3_k127_3651550_2 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 434.0
BYD3_k127_3651550_3 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 405.0
BYD3_k127_3651550_4 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 347.0
BYD3_k127_3651550_5 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007741 308.0
BYD3_k127_3651550_6 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 327.0
BYD3_k127_3651550_7 thiolester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000007292 236.0
BYD3_k127_3651550_8 Alpha beta hydrolase K00433 - 1.11.1.10 0.000000000000000000000000000000000000000000000000000000000000004483 228.0
BYD3_k127_3651550_9 Adenylate cyclase - - - 0.0005035 54.0
BYD3_k127_3658176_0 PFAM MOFRL domain protein K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 610.0
BYD3_k127_3658176_1 Belongs to the hyi family K01816 - 5.3.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 376.0
BYD3_k127_3658176_2 Transposase - - - 0.00000000000000000000000000000000000000000000000000000005695 201.0
BYD3_k127_3658176_3 import inner membrane translocase subunit Tim44 - - - 0.000000000000000000000000000000000000000000000000000002035 197.0
BYD3_k127_3664469_0 RNB K01147 - 3.1.13.1 3.215e-275 859.0
BYD3_k127_3664469_1 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 5.763e-247 768.0
BYD3_k127_3664469_10 - - - - 0.00000000000000000000000000000000000000000000000002548 182.0
BYD3_k127_3664469_11 rubredoxin - - - 0.0000000000000000000000000000000002726 131.0
BYD3_k127_3664469_2 Aminotransferase K01845 - 5.4.3.8 5.53e-234 728.0
BYD3_k127_3664469_3 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 490.0
BYD3_k127_3664469_4 Type IV pili methyl-accepting chemotaxis transducer N-term K02660 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 447.0
BYD3_k127_3664469_5 Uncharacterised protein family (UPF0227) K07000 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 286.0
BYD3_k127_3664469_6 cheY-homologous receiver domain K02657 - - 0.000000000000000000000000000000000000000000000000000000000000000000001195 238.0
BYD3_k127_3664469_7 PFAM response regulator receiver K02658 - - 0.000000000000000000000000000000000000000000000000000000000000000000001379 237.0
BYD3_k127_3664469_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000002188 229.0
BYD3_k127_3664469_9 CheW-like domain K02659 - - 0.00000000000000000000000000000000000000000000000000000000000001297 219.0
BYD3_k127_36791_0 Alpha beta hydrolase K07019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009991 458.0
BYD3_k127_36791_1 Protein of unknown function (DUF2946) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003184 267.0
BYD3_k127_36791_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001317 255.0
BYD3_k127_36791_3 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000008215 186.0
BYD3_k127_3682249_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 3.708e-235 736.0
BYD3_k127_3682249_1 HAD-superfamily hydrolase, subfamily IB (PSPase-like) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 312.0
BYD3_k127_3682249_2 Belongs to the DnaA family K10763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001832 260.0
BYD3_k127_3682249_3 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000001709 190.0
BYD3_k127_3682249_4 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000009207 179.0
BYD3_k127_3682249_5 Putative member of DMT superfamily (DUF486) K09922 - - 0.0000000000000000000000000000000000000000005807 167.0
BYD3_k127_3691141_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 591.0
BYD3_k127_3691141_1 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002811 527.0
BYD3_k127_3691141_2 ABC-type Fe3 transport system, permease component K02011 - - 0.000000000000000000000000000000000000000000000000000002995 192.0
BYD3_k127_3691321_0 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 571.0
BYD3_k127_3691321_1 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 482.0
BYD3_k127_3691321_10 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000001973 153.0
BYD3_k127_3691321_11 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000003384 139.0
BYD3_k127_3691321_12 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000003568 140.0
BYD3_k127_3691321_13 glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.0000000000000000000000000004759 115.0
BYD3_k127_3691321_14 - - - - 0.000000000000000000000000001398 126.0
BYD3_k127_3691321_15 Domain of unknown function (DUF4440) - - - 0.000000000000000000005145 104.0
BYD3_k127_3691321_16 Major facilitator superfamily - - - 0.00000000007954 71.0
BYD3_k127_3691321_17 Putative zinc ribbon domain - - - 0.0000000008497 64.0
BYD3_k127_3691321_19 Glutathione-dependent formaldehyde-activating - - - 0.000001407 53.0
BYD3_k127_3691321_2 ATPases associated with a variety of cellular activities K02028 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006796 415.0
BYD3_k127_3691321_3 Bacterial periplasmic substrate-binding proteins K02030,K10022 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255 398.0
BYD3_k127_3691321_4 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009594 386.0
BYD3_k127_3691321_5 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 348.0
BYD3_k127_3691321_6 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 329.0
BYD3_k127_3691321_7 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 301.0
BYD3_k127_3691321_8 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000004502 218.0
BYD3_k127_3691321_9 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000000000006468 218.0
BYD3_k127_3708218_0 FAD binding domain - - - 1.963e-263 823.0
BYD3_k127_3708218_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 2.974e-212 698.0
BYD3_k127_3708218_2 transport system periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002896 529.0
BYD3_k127_3708218_3 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 340.0
BYD3_k127_3708218_4 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000001371 231.0
BYD3_k127_3708218_5 CBS domain - - - 0.00000000000000000000000000000000000000000000000000001045 195.0
BYD3_k127_3708218_6 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000001486 166.0
BYD3_k127_3708218_7 Peptidoglycan-binding domain 1 protein K07273 - - 0.0000000002864 71.0
BYD3_k127_3716569_0 DNA topoisomerase III K03169 - 5.99.1.2 0.0 1426.0
BYD3_k127_3716569_1 Mo-co oxidoreductase dimerisation domain K17225 - - 1.043e-214 668.0
BYD3_k127_3716569_10 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000000000000000004732 208.0
BYD3_k127_3716569_11 PFAM Sulphur oxidation protein SoxZ K17227 - - 0.00000000000000000000000000000000000000000000000000001158 189.0
BYD3_k127_3716569_12 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000005512 161.0
BYD3_k127_3716569_13 LemA family K03744 - - 0.0000000000000000000000000000000001488 139.0
BYD3_k127_3716569_14 Sporulation domain protein - - - 0.0000000000000000000000000000002082 133.0
BYD3_k127_3716569_15 Mo-co oxidoreductase dimerisation domain K17225 - - 0.0000000000000000000000001234 110.0
BYD3_k127_3716569_2 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 602.0
BYD3_k127_3716569_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005828 538.0
BYD3_k127_3716569_4 Subtilase family K14645 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 533.0
BYD3_k127_3716569_5 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009014 458.0
BYD3_k127_3716569_6 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 309.0
BYD3_k127_3716569_7 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 307.0
BYD3_k127_3716569_8 Belongs to the peptidase S8 family K14645 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000286 301.0
BYD3_k127_3716569_9 PFAM nuclear protein SET K07117 - - 0.000000000000000000000000000000000000000000000000000000000000000000002232 241.0
BYD3_k127_3720901_0 PFAM Dehydrogenase, E1 component K00166 - 1.2.4.4 3.261e-220 688.0
BYD3_k127_3720901_1 FAD binding domain K00480 - 1.14.13.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 563.0
BYD3_k127_3720901_10 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 345.0
BYD3_k127_3720901_11 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008454 280.0
BYD3_k127_3720901_12 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000006552 212.0
BYD3_k127_3720901_13 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000002232 105.0
BYD3_k127_3720901_2 Lytic murein transglycosylase K08305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 560.0
BYD3_k127_3720901_3 Cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 526.0
BYD3_k127_3720901_4 TIGRFAM TRAP transporter, DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 513.0
BYD3_k127_3720901_5 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007631 512.0
BYD3_k127_3720901_6 Tannase and feruloyl esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 474.0
BYD3_k127_3720901_7 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 395.0
BYD3_k127_3720901_8 Trypsin-like peptidase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 375.0
BYD3_k127_3720901_9 PGAP1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 370.0
BYD3_k127_373696_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 7.632e-234 729.0
BYD3_k127_373696_1 D-aminoacylase domain protein K01461,K06015 - 3.5.1.81,3.5.1.82 5.09e-206 648.0
BYD3_k127_373696_2 PFAM phenylacetic acid catabolic family protein K02609 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007391 603.0
BYD3_k127_373696_3 PFAM phenylacetic acid catabolic family protein K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007134 344.0
BYD3_k127_373696_4 phenylacetic acid degradation protein PaaD K02614 GO:0003674,GO:0003824,GO:0016289,GO:0016787,GO:0016788,GO:0016790 - 0.00000000000000000000000000000000000000000000000000000000000000000002834 237.0
BYD3_k127_373696_5 TIGRFAM phenylacetate-CoA oxygenase, PaaH subunit K02610 - - 0.0000000000000000000000000000000000000000000000595 186.0
BYD3_k127_376639_0 Amidase K01457 - 3.5.1.54 4.547e-218 702.0
BYD3_k127_376639_1 TrkA-C domain K03499 - - 2.403e-210 673.0
BYD3_k127_376639_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007221 364.0
BYD3_k127_376639_3 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 349.0
BYD3_k127_376639_4 isochorismatase hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 339.0
BYD3_k127_376639_5 GntR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007964 307.0
BYD3_k127_376639_6 Phosphorylates 6-deoxy-6-sulfo-D-fructose (SF) to 6- deoxy-6-sulfo-D-fructose 1-phosphate (SFP) K00846,K18478 - 2.7.1.184,2.7.1.3 0.0000000000000000000000000000000000000000000000000003784 196.0
BYD3_k127_376639_7 Protein of unknown function (DUF3225) - - - 0.000000000000000000000000000000000000008262 166.0
BYD3_k127_3786268_0 Collagenase K08303 - - 5.908e-260 809.0
BYD3_k127_3786268_1 Outer membrane protein beta-barrel family K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 365.0
BYD3_k127_3814319_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1133.0
BYD3_k127_3814319_1 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 475.0
BYD3_k127_3814319_2 PFAM Phospholipase D Transphosphatidylase K06132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 420.0
BYD3_k127_3814319_3 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000000000004734 239.0
BYD3_k127_3814319_4 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.0000000000000000000000000000000000000000000000000000000005005 217.0
BYD3_k127_3814319_5 Glycosyl transferase family 2 - - - 0.00000000000001871 77.0
BYD3_k127_3828254_0 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 1.061e-218 704.0
BYD3_k127_3828254_1 Alkaline and neutral invertase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007364 568.0
BYD3_k127_3828254_2 TIGRFAM malto-oligosyltrehalose trehalohydrolase K00700,K01236 - 2.4.1.18,3.2.1.141 0.00000000000000000000000000000000000000000000005131 176.0
BYD3_k127_383282_0 Indolepyruvate ferredoxin oxidoreductase K00179 - 1.2.7.8 0.0 1018.0
BYD3_k127_383282_1 oxidoreductase - - - 1.578e-217 687.0
BYD3_k127_383282_10 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 344.0
BYD3_k127_383282_11 CobQ/CobB/MinD/ParA nucleotide binding domain K08252,K16692 - 2.7.10.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 329.0
BYD3_k127_383282_12 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 301.0
BYD3_k127_383282_13 PFAM regulatory protein, MarR - - - 0.000000000000000000000000000000000000000000000000000000004023 204.0
BYD3_k127_383282_14 Belongs to the peptidase S8 family K03932 - - 0.0002523 55.0
BYD3_k127_383282_2 NAD NADP octopine nopaline dehydrogenase K04940 - 1.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 571.0
BYD3_k127_383282_3 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 504.0
BYD3_k127_383282_4 Belongs to the DegT DnrJ EryC1 family K07806,K21337 - 2.6.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 505.0
BYD3_k127_383282_5 GDP-mannose 4,6 dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007391 483.0
BYD3_k127_383282_6 Chain length determinant protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 473.0
BYD3_k127_383282_7 Domain of unknown function (DUF1929) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 446.0
BYD3_k127_383282_8 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 425.0
BYD3_k127_383282_9 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 377.0
BYD3_k127_3857872_0 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 429.0
BYD3_k127_3857872_1 Enoyl-(Acyl carrier protein) reductase K00019 - 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 390.0
BYD3_k127_3857872_2 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000929 287.0
BYD3_k127_3857872_3 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000001372 205.0
BYD3_k127_3857872_4 Cupin domain - - - 0.00000000000000000000000000000000000000000000000002828 184.0
BYD3_k127_3868521_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 4.18e-237 759.0
BYD3_k127_3868521_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 2.778e-230 715.0
BYD3_k127_3868521_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 2.678e-220 694.0
BYD3_k127_3868521_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 603.0
BYD3_k127_3868521_4 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 554.0
BYD3_k127_3868521_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 530.0
BYD3_k127_3868521_6 Cell wall formation K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 527.0
BYD3_k127_3868521_7 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008127 334.0
BYD3_k127_3868521_8 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001253 262.0
BYD3_k127_3889425_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 519.0
BYD3_k127_3889425_1 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 324.0
BYD3_k127_3889425_2 TPM domain K06872 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 319.0
BYD3_k127_3889425_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001317 258.0
BYD3_k127_3889425_4 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000001956 77.0
BYD3_k127_3889425_5 TPM domain - - - 0.0000000002289 72.0
BYD3_k127_3889425_6 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000004889 54.0
BYD3_k127_3901240_0 AAA ATPase domain - - - 5.428e-297 942.0
BYD3_k127_3901240_1 Dyp-type peroxidase family - - - 1.293e-296 948.0
BYD3_k127_3901240_2 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002278 254.0
BYD3_k127_3901240_3 Drug resistance transporter Bcr CflA subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000001247 232.0
BYD3_k127_3901240_4 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000128 209.0
BYD3_k127_3901240_5 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000001181 175.0
BYD3_k127_3916576_0 Aldehyde dehydrogenase family - - - 8.443e-226 707.0
BYD3_k127_3916576_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 582.0
BYD3_k127_3916576_10 HAD-superfamily hydrolase, subfamily IB, PSPase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000535 280.0
BYD3_k127_3916576_11 Iron-containing alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000001932 182.0
BYD3_k127_3916576_12 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000000001786 160.0
BYD3_k127_3916576_13 Belongs to the aspartate glutamate racemases family K01779 - 5.1.1.13 0.00000000000000000000000000000000000002868 145.0
BYD3_k127_3916576_14 - - - - 0.00000000000000000000000006209 115.0
BYD3_k127_3916576_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 586.0
BYD3_k127_3916576_3 histidine kinase A domain protein K11527,K20973 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 545.0
BYD3_k127_3916576_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 505.0
BYD3_k127_3916576_5 RND efflux system, outer membrane lipoprotein, NodT - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 435.0
BYD3_k127_3916576_6 Peptidase C26 K01658,K07010 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 419.0
BYD3_k127_3916576_7 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 364.0
BYD3_k127_3916576_8 Domain of unknown function (DUF4382) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006178 357.0
BYD3_k127_3916576_9 Peptidase C26 K01658,K07010 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 341.0
BYD3_k127_3917374_0 Major Facilitator Superfamily - - - 6.05e-214 671.0
BYD3_k127_3917374_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 598.0
BYD3_k127_3917374_10 Belongs to the UPF0225 family K09858 - - 0.00000000000000000000000000000000000000001945 166.0
BYD3_k127_3917374_11 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) - - - 0.0000000000000000000000002594 108.0
BYD3_k127_3917374_12 - - - - 0.0000000000000000000000002686 109.0
BYD3_k127_3917374_13 Cytochrome c - - - 0.0000000000000000000001717 106.0
BYD3_k127_3917374_14 Protein of unknown function (DUF3309) - - - 0.00000000000000000000133 96.0
BYD3_k127_3917374_15 - - - - 0.00000000000007322 76.0
BYD3_k127_3917374_16 - - - - 0.000000000001664 72.0
BYD3_k127_3917374_17 - - - - 0.000000001425 63.0
BYD3_k127_3917374_18 - - - - 0.00000519 49.0
BYD3_k127_3917374_19 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000006674 50.0
BYD3_k127_3917374_2 Reductase C-terminal K05297 - 1.18.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007163 575.0
BYD3_k127_3917374_3 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 503.0
BYD3_k127_3917374_4 PFAM bifunctional deaminase-reductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006056 333.0
BYD3_k127_3917374_5 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K03790 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009047 311.0
BYD3_k127_3917374_6 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003669 278.0
BYD3_k127_3917374_7 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003601 264.0
BYD3_k127_3917374_8 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000000000000005895 205.0
BYD3_k127_3917374_9 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000000000000000000000000000002997 204.0
BYD3_k127_3919343_0 PFAM Tannase and feruloyl esterase K21105 - 3.1.1.102 2.02e-289 900.0
BYD3_k127_3919343_1 FAD binding domain K05712 - 1.14.13.127 2.421e-254 794.0
BYD3_k127_3919343_10 Tetratricopeptide repeat domain protein - - - 0.0005626 51.0
BYD3_k127_3919343_2 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 7.039e-245 761.0
BYD3_k127_3919343_3 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 1.526e-229 723.0
BYD3_k127_3919343_4 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 550.0
BYD3_k127_3919343_5 Belongs to the DapA family K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 465.0
BYD3_k127_3919343_6 Bacterial transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 325.0
BYD3_k127_3919343_7 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007839 266.0
BYD3_k127_3919343_8 DNA-binding transcription factor activity K06075 - - 0.0000000000000000000000000000000000000000127 159.0
BYD3_k127_3919343_9 Protein of unknown function (DUF2783) - - - 0.00000000000000006767 92.0
BYD3_k127_3980155_0 Uncharacterised protein family (UPF0261) - - - 1.617e-290 911.0
BYD3_k127_3980155_1 Flotillin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007169 438.0
BYD3_k127_3980155_2 Phosphoenolpyruvate hydrolase-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 422.0
BYD3_k127_3980957_0 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 574.0
BYD3_k127_3980957_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 564.0
BYD3_k127_3980957_2 Belongs to the UPF0261 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 508.0
BYD3_k127_3980957_3 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 496.0
BYD3_k127_3980957_4 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 324.0
BYD3_k127_3980957_5 Hydrolase K07025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 313.0
BYD3_k127_3980957_6 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009707 271.0
BYD3_k127_3980957_7 helix_turn_helix, arabinose operon control protein K04033 - - 0.00000000000000000000000000000000000000000000000000000000000000000009248 245.0
BYD3_k127_3980957_8 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000003047 196.0
BYD3_k127_3980957_9 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000001204 156.0
BYD3_k127_3984765_0 Pfam Methyltransferase - - - 1.289e-202 643.0
BYD3_k127_3984765_1 Glycosyl transferase family 41 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 555.0
BYD3_k127_3984765_2 GHMP kinases N terminal domain K07031 - 2.7.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000537 498.0
BYD3_k127_3984765_3 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005268 340.0
BYD3_k127_3984765_4 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00161,K11381 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000004089 243.0
BYD3_k127_3984765_5 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor - - - 0.000000000000000000000000000000000000000000000000000000000001602 215.0
BYD3_k127_3989169_0 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 3.821e-195 616.0
BYD3_k127_3989169_1 Esterase PHB depolymerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003658 424.0
BYD3_k127_3989169_2 PFAM fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 342.0
BYD3_k127_3989169_3 RNA-metabolising metallo-beta-lactamase K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 316.0
BYD3_k127_3989169_4 Belongs to the Dps family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001647 284.0
BYD3_k127_3989169_5 transcriptional regulators containing the CopG Arc MetJ DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000001206 209.0
BYD3_k127_3989169_6 PFAM Hemerythrin HHE cation binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000005819 203.0
BYD3_k127_4039476_0 histidyl-tRNA synthetase K01892 - 6.1.1.21 1.157e-230 735.0
BYD3_k127_4039476_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 6.585e-224 708.0
BYD3_k127_4039476_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 592.0
BYD3_k127_4039476_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 470.0
BYD3_k127_4039476_4 Type IV pilus biogenesis stability protein PilW K02656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 340.0
BYD3_k127_4039476_5 Tetratricopeptide repeat-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 304.0
BYD3_k127_4039476_6 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000269 251.0
BYD3_k127_4039476_7 Domain of unknown function (DUF4115) K15539 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003417 252.0
BYD3_k127_4039476_8 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000001467 229.0
BYD3_k127_4039476_9 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000002192 58.0
BYD3_k127_4050234_0 Oxidoreductase FAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 456.0
BYD3_k127_4050234_1 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 394.0
BYD3_k127_4050234_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008809 341.0
BYD3_k127_4050234_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000001707 166.0
BYD3_k127_4057058_0 Belongs to the DegT DnrJ EryC1 family K02805 - 2.6.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 554.0
BYD3_k127_4057058_1 beta-fructofuranosidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 436.0
BYD3_k127_4057058_2 WbqC-like protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 376.0
BYD3_k127_4057058_3 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 351.0
BYD3_k127_4057058_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001202 284.0
BYD3_k127_4057058_5 2-hydroxychromene-2-carboxylate isomerase K14584 - 5.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000005013 261.0
BYD3_k127_4057058_6 7TMR-DISM extracellular 2 - - - 0.0000000000000000000000000000000000000004509 165.0
BYD3_k127_4057058_7 - - - - 0.000000000000000000001018 106.0
BYD3_k127_4066598_0 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 - 2.3.3.9 0.0 1177.0
BYD3_k127_4066598_1 Zn_pept - - - 3.448e-310 956.0
BYD3_k127_4066598_2 Tryptophan halogenase K21401 - 1.3.99.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008865 541.0
BYD3_k127_4066598_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 516.0
BYD3_k127_4066598_4 Glutamine amido-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 439.0
BYD3_k127_4066598_5 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL-like protein K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 379.0
BYD3_k127_4066598_6 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 304.0
BYD3_k127_4066598_7 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000004238 237.0
BYD3_k127_4076180_0 D-alanine--D-alanine ligase - - - 6.342e-199 637.0
BYD3_k127_4076180_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006437 361.0
BYD3_k127_4076180_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004144 267.0
BYD3_k127_4076180_3 YHS domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003632 245.0
BYD3_k127_4076180_4 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001126 236.0
BYD3_k127_4076180_5 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000004331 214.0
BYD3_k127_4076180_6 DinB family - - - 0.0000000000000000000000000000000000000000002361 166.0
BYD3_k127_4076180_7 Redoxin - - - 0.00000000000000000000000000000000000000005843 154.0
BYD3_k127_4084000_0 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 341.0
BYD3_k127_4084000_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005572 333.0
BYD3_k127_4084000_2 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000009547 250.0
BYD3_k127_4084000_3 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000005272 178.0
BYD3_k127_4084000_4 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000000000000000000000002552 151.0
BYD3_k127_4084000_5 Protein of unknown function (DUF2846) - - - 0.000000000000000000000000000000001088 135.0
BYD3_k127_4085797_0 O-Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005831 362.0
BYD3_k127_4085797_1 glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.000000000000000000000000000000000000000000000000000000000007374 209.0
BYD3_k127_4085797_2 Bacterial transcriptional repressor C-terminal - - - 0.00000000000000000000000000000000000000000000000000000003067 202.0
BYD3_k127_4085797_3 DinB family - - - 0.000000000000000000000000000000000000000000000000000004747 195.0
BYD3_k127_4085797_4 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000003461 173.0
BYD3_k127_4085797_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.000000002749 66.0
BYD3_k127_4085902_0 HELICc2 K03722 - 3.6.4.12 3.926e-293 915.0
BYD3_k127_4085902_1 Serine threonine protein phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 416.0
BYD3_k127_4085902_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 405.0
BYD3_k127_4085902_3 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000006733 188.0
BYD3_k127_4085902_4 Protein of unknown function (DUF465) - - - 0.0000000000000000000000001516 108.0
BYD3_k127_4097789_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.0 1513.0
BYD3_k127_4097789_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0 1238.0
BYD3_k127_4097789_2 Glycine cleavage system T protein K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005841 558.0
BYD3_k127_4097789_3 TRAP transporter solute receptor TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 484.0
BYD3_k127_4097789_4 Asp Glu Hydantoin racemase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003198 278.0
BYD3_k127_4097789_5 Flavin-binding monooxygenase-like K07222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005067 249.0
BYD3_k127_4097789_6 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007303 240.0
BYD3_k127_4126505_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 358.0
BYD3_k127_4126505_1 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 331.0
BYD3_k127_4126505_2 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 312.0
BYD3_k127_4126505_3 MASE1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001934 285.0
BYD3_k127_4126505_4 Protein of unknown function (DUF1232) - - - 0.00000000000000000000000000000000000000007779 168.0
BYD3_k127_4126505_5 methyltransferase K15942 - 2.1.1.288 0.00000000000000000000000000000002683 129.0
BYD3_k127_4126505_6 Protein involved in receptor activity, transporter activity and transport K16092 - - 0.000001381 54.0
BYD3_k127_4126505_7 COG4993 Glucose dehydrogenase - - - 0.000001898 59.0
BYD3_k127_4126505_8 Transmembrane family 220, helix - - - 0.00007258 52.0
BYD3_k127_4143611_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 1.021e-283 876.0
BYD3_k127_4143611_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005643 573.0
BYD3_k127_4143611_2 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000764 262.0
BYD3_k127_4143611_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000000000004871 200.0
BYD3_k127_4151830_0 transport system fused permease components - - - 1.066e-238 752.0
BYD3_k127_4151830_1 Pyridoxal-phosphate dependent enzyme K01505,K05396,K17950 - 3.5.99.7,4.4.1.15,4.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000894 524.0
BYD3_k127_4151830_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005547 273.0
BYD3_k127_4151830_3 - - - - 0.000000000000000000000000000000000000000000000000000000000006347 219.0
BYD3_k127_4159167_0 Oxidoreductase domain protein - - - 1.654e-224 713.0
BYD3_k127_4159167_1 Protein of unknown function (DUF993) - - - 1.85e-201 636.0
BYD3_k127_4159167_2 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008675 479.0
BYD3_k127_4159167_3 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006438 460.0
BYD3_k127_4159167_4 Xylose isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 461.0
BYD3_k127_4159167_5 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 407.0
BYD3_k127_4159167_6 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000002454 123.0
BYD3_k127_4159167_7 Belongs to the arginase family K01476,K01480,K12255,K18459 - 3.5.3.1,3.5.3.11,3.5.3.17,3.5.3.7 0.00000000000000000000000728 104.0
BYD3_k127_4159167_8 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000000000009374 110.0
BYD3_k127_416938_0 Dehydratase family K01687 - 4.2.1.9 2.432e-263 821.0
BYD3_k127_416938_1 Glucose inhibited division protein A - - - 4.615e-247 780.0
BYD3_k127_416938_2 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00394 - 1.8.99.2 2.393e-226 719.0
BYD3_k127_416938_3 Protein of unknown function (DUF521) K09123 - - 0.00000000000000000000000000000000000000000000000000000000000000000008884 252.0
BYD3_k127_416938_4 GntR family transcriptional regulator K03486,K03710 - - 0.00000000000000000000000000000000000000000000000000000000003008 209.0
BYD3_k127_416938_5 Transcriptional regulator GntR family K03710 - - 0.000000000000000000000004576 103.0
BYD3_k127_416938_6 Transcriptional - - - 0.00000000000000002156 96.0
BYD3_k127_4181325_0 Serine aminopeptidase, S33 K01253,K08253 - 2.7.10.2,3.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 531.0
BYD3_k127_4181325_1 Cupin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 327.0
BYD3_k127_4181325_2 ubiquinone menaquinone biosynthesis methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002034 301.0
BYD3_k127_4181325_3 Short-chain dehydrogenase reductase sdr K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000007341 235.0
BYD3_k127_4204808_0 ABC transporter K02056 - 3.6.3.17 7.413e-252 786.0
BYD3_k127_4204808_1 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 530.0
BYD3_k127_4204808_2 PFAM Basic membrane lipoprotein K02058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 434.0
BYD3_k127_4204808_3 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 413.0
BYD3_k127_4218426_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1313.0
BYD3_k127_4218426_1 Belongs to the aldehyde dehydrogenase family K00141 - 1.2.1.28 3.207e-231 718.0
BYD3_k127_4218426_10 PFAM binding-protein-dependent transport systems inner membrane component K05773,K06857 - 3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008546 329.0
BYD3_k127_4218426_11 AAA domain, putative AbiEii toxin, Type IV TA system K06857 - 3.6.3.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004171 316.0
BYD3_k127_4218426_12 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001509 238.0
BYD3_k127_4218426_13 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.0000000000000000000000000000000000000000004025 162.0
BYD3_k127_4218426_14 - - - - 0.00000000000000000000000005248 113.0
BYD3_k127_4218426_15 - - - - 0.0000000000003496 72.0
BYD3_k127_4218426_16 - - - - 0.0006041 51.0
BYD3_k127_4218426_2 molybdopterin K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006367 557.0
BYD3_k127_4218426_3 TIGRFAM Formate dehydrogenase, gamma subunit K00127 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 503.0
BYD3_k127_4218426_4 ATPases associated with a variety of cellular activities K02010,K02017,K11072 - 3.6.3.29,3.6.3.30,3.6.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 470.0
BYD3_k127_4218426_5 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 431.0
BYD3_k127_4218426_6 4Fe-4S dicluster domain K00124,K07307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 417.0
BYD3_k127_4218426_7 PBP superfamily domain K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 406.0
BYD3_k127_4218426_8 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007035 364.0
BYD3_k127_4218426_9 PFAM binding-protein-dependent transport systems inner membrane component K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 362.0
BYD3_k127_4225591_0 Peptidase family M3 K01284 - 3.4.15.5 5.637e-299 931.0
BYD3_k127_4225591_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 527.0
BYD3_k127_4225591_2 Prolyl oligopeptidase K01322 - 3.4.21.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 352.0
BYD3_k127_42402_0 glutamine synthetase K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 5.758e-298 920.0
BYD3_k127_42402_1 nitrogen regulation protein NR(I) K07712 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 1.915e-211 663.0
BYD3_k127_42402_2 Histidine kinase K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 508.0
BYD3_k127_42402_3 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 402.0
BYD3_k127_42402_4 - - - - 0.00000000000000000000000000000000000000000003765 168.0
BYD3_k127_4249435_0 Diguanylate cyclase - - - 3.736e-207 666.0
BYD3_k127_4249435_1 PHB de-polymerase C-terminus K05973 - 3.1.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 554.0
BYD3_k127_4249435_10 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000007784 218.0
BYD3_k127_4249435_11 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000001003 142.0
BYD3_k127_4249435_12 PFAM Cupin 2 conserved barrel domain protein - - - 0.00000000000000000000000000003975 116.0
BYD3_k127_4249435_13 YCII-related domain - - - 0.0000000000000000000002054 98.0
BYD3_k127_4249435_2 Gluconolactonase K01053,K14274 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 546.0
BYD3_k127_4249435_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007665 446.0
BYD3_k127_4249435_4 Peptidase dimerisation domain K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 420.0
BYD3_k127_4249435_5 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006895 337.0
BYD3_k127_4249435_6 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005797 282.0
BYD3_k127_4249435_7 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000007769 268.0
BYD3_k127_4249435_8 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001104 244.0
BYD3_k127_4249435_9 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002378 237.0
BYD3_k127_4251002_0 FAD linked oxidases, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007266 521.0
BYD3_k127_4251002_1 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000000000000000000000000000000000002814 208.0
BYD3_k127_4266905_0 ABC transporter K15738 - - 3.216e-282 881.0
BYD3_k127_4266905_1 PFAM AMP-dependent synthetase and ligase - - - 1.475e-220 695.0
BYD3_k127_4266905_10 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000007893 211.0
BYD3_k127_4266905_11 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000007913 209.0
BYD3_k127_4266905_12 Belongs to the peptidase M48B family - - - 0.000000000000000000000000000000000000000000000000001357 190.0
BYD3_k127_4266905_13 PFAM PRC-barrel domain protein - - - 0.000000000000000000000000000000000000000000000005788 173.0
BYD3_k127_4266905_14 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000000000000000000000000000001299 140.0
BYD3_k127_4266905_15 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000006708 126.0
BYD3_k127_4266905_16 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000007001 111.0
BYD3_k127_4266905_18 - - - - 0.000000000000000000000008472 114.0
BYD3_k127_4266905_19 protein conserved in bacteria - - - 0.0000000000002775 78.0
BYD3_k127_4266905_2 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 606.0
BYD3_k127_4266905_3 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 595.0
BYD3_k127_4266905_4 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 583.0
BYD3_k127_4266905_5 Glucose sorbosone K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004666 448.0
BYD3_k127_4266905_6 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 409.0
BYD3_k127_4266905_7 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 400.0
BYD3_k127_4266905_8 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001173 249.0
BYD3_k127_4266905_9 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004713 232.0
BYD3_k127_4272872_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004959 575.0
BYD3_k127_4272872_1 Two-component sensor kinase N-terminal K07649 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008062 570.0
BYD3_k127_4272872_2 PFAM conserved K07795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 537.0
BYD3_k127_4272872_3 Transcriptional regulatory protein, C terminal K07774 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 305.0
BYD3_k127_4272872_4 Tripartite tricarboxylate transporter TctB family K07794 - - 0.00000000000000000000000000000000000000000000000000000000000000007927 226.0
BYD3_k127_4272872_5 Ribosome-associated heat shock protein K04762 - - 0.00000000000000000000000000009643 120.0
BYD3_k127_4292774_0 Catalyzes the dehydration of galactarate to form 5- dehydro-4-deoxy-D-glucarate K01685,K01708 - 4.2.1.42,4.2.1.7 2.691e-264 824.0
BYD3_k127_4292774_1 Tartrate dehydrogenase K07246 - 1.1.1.83,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005139 601.0
BYD3_k127_4292774_2 Fad dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 510.0
BYD3_k127_4292774_3 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006974 433.0
BYD3_k127_4292774_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 450.0
BYD3_k127_4292774_5 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 372.0
BYD3_k127_4292774_6 PFAM Amidohydrolase 2 K18982 - 5.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 334.0
BYD3_k127_4292774_7 Transcription factor zinc-finger - - - 0.000000000000000000000000000000000000386 153.0
BYD3_k127_4292774_8 Putative diguanylate phosphodiesterase - - - 0.00006177 53.0
BYD3_k127_4320439_0 (ABC) transporter K01995 - - 4.617e-218 692.0
BYD3_k127_4320439_1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 518.0
BYD3_k127_4320439_2 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 383.0
BYD3_k127_4320439_3 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000001088 166.0
BYD3_k127_4320439_4 ABC transporter K01996 - - 0.0000000000000000000000000000000000001118 143.0
BYD3_k127_4320439_5 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000005767 138.0
BYD3_k127_4320439_6 Cytochrome c - - - 0.000001858 51.0
BYD3_k127_4323649_0 Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC) - - - 8.239e-226 709.0
BYD3_k127_4323649_1 glutathione transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007162 366.0
BYD3_k127_4323649_2 von Willebrand factor (vWF) type A domain K16257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 356.0
BYD3_k127_4323649_3 von Willebrand factor (vWF) type A domain K16259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 298.0
BYD3_k127_4323649_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000009626 235.0
BYD3_k127_4323649_5 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000003922 210.0
BYD3_k127_4323649_6 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000004429 145.0
BYD3_k127_4323649_7 - K16258 - - 0.0000000000000000000000000000000000188 154.0
BYD3_k127_4323649_8 - K16256 - - 0.000000000000000000000000004887 126.0
BYD3_k127_4323649_9 - - - - 0.000000000000000247 85.0
BYD3_k127_4341837_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004676 444.0
BYD3_k127_4341837_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00646,K00647,K09458 - 2.3.1.179,2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 404.0
BYD3_k127_4341837_2 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 320.0
BYD3_k127_4341837_3 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003308 247.0
BYD3_k127_4341837_4 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000001848 187.0
BYD3_k127_4341837_5 Transcription elongation factor, GreA/GreB, C-term K06140 - - 0.0000000000000000000000000000000000000000000006745 171.0
BYD3_k127_4355573_0 Protein of unknown function (DUF1631) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007522 601.0
BYD3_k127_4355573_1 Trypsin K04691,K04772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 501.0
BYD3_k127_4355573_10 Phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.000000000000000000000000000000000000000000001276 168.0
BYD3_k127_4355573_11 Protein of unknown function (DUF815) K06923 - - 0.000000000000000000000000000000000000000001507 157.0
BYD3_k127_4355573_12 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000000000000003145 121.0
BYD3_k127_4355573_2 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 432.0
BYD3_k127_4355573_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 376.0
BYD3_k127_4355573_4 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 357.0
BYD3_k127_4355573_5 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000008554 242.0
BYD3_k127_4355573_6 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000000000000001335 231.0
BYD3_k127_4355573_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000000000000000000000000000000000000000000000000000000000501 216.0
BYD3_k127_4355573_8 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.0000000000000000000000000000000000000000000000000000000008357 202.0
BYD3_k127_4355573_9 membrane - - - 0.000000000000000000000000000000000000000000000000001187 186.0
BYD3_k127_4364109_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0 1325.0
BYD3_k127_4364109_1 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 629.0
BYD3_k127_4364109_2 XdhC Rossmann domain K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005732 548.0
BYD3_k127_4364109_3 AAA domain (dynein-related subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008196 471.0
BYD3_k127_4364109_4 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 384.0
BYD3_k127_4364109_5 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 371.0
BYD3_k127_4364109_6 glutathione s-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 322.0
BYD3_k127_4364109_7 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000003068 247.0
BYD3_k127_4364109_8 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000003416 245.0
BYD3_k127_4364109_9 One-component, b-type heme-containing aerobic sensor and transcriptional regulator that responds to CO by activating the expression of the oxidation operon cox K21696 - - 0.00000000000000000000000000000000000000000000000000000000000001026 226.0
BYD3_k127_441910_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 586.0
BYD3_k127_441910_1 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 584.0
BYD3_k127_441910_10 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000000000000000000000000007896 200.0
BYD3_k127_441910_11 AAA domain - - - 0.000000000000000000000000000000000000000000000001182 191.0
BYD3_k127_441910_12 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000001022 128.0
BYD3_k127_441910_13 Nicotinamide mononucleotide transporter K03811 - - 0.00000000000000000000000001222 109.0
BYD3_k127_441910_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 559.0
BYD3_k127_441910_3 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000407 478.0
BYD3_k127_441910_4 Tyrosine recombinase XerD K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 450.0
BYD3_k127_441910_5 Auxin Efflux Carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 383.0
BYD3_k127_441910_6 Protein of unknown function (DUF455) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 341.0
BYD3_k127_441910_7 PFAM SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 325.0
BYD3_k127_441910_8 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005373 325.0
BYD3_k127_441910_9 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000615 310.0
BYD3_k127_4460454_0 Biotin carboxylase C-terminal domain K01965 - 6.4.1.3 0.0 1067.0
BYD3_k127_4460454_1 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 1.084e-242 751.0
BYD3_k127_4460454_2 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 392.0
BYD3_k127_4460454_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 284.0
BYD3_k127_4460454_4 Protein of unknown function, DUF481 K07283 - - 0.000000000000000000000000000000000000000000000000000000000002139 218.0
BYD3_k127_4460454_5 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 0.000000000000000000000000000000000000000000000003111 173.0
BYD3_k127_4460454_6 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000001023 111.0
BYD3_k127_4465265_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 3.679e-202 632.0
BYD3_k127_4465265_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 9.718e-197 619.0
BYD3_k127_4465265_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 508.0
BYD3_k127_4465265_3 Cytidylyltransferase family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 457.0
BYD3_k127_4465265_4 dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 320.0
BYD3_k127_4465265_5 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000831 280.0
BYD3_k127_4465265_6 Nucleotidyltransferase - - - 0.000000000000000000000000000000000000000000000000003363 194.0
BYD3_k127_4465265_7 - - - - 0.00000000000003351 74.0
BYD3_k127_4465265_8 Phosphate acyltransferases - - - 0.000000001429 59.0
BYD3_k127_4466913_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18303 - - 0.0 1442.0
BYD3_k127_4466913_1 the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 536.0
BYD3_k127_4466913_2 RND efflux system, outer membrane lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 438.0
BYD3_k127_4466913_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004117 322.0
BYD3_k127_4466913_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 308.0
BYD3_k127_4466913_5 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000926 262.0
BYD3_k127_4466913_6 Bacterial transcriptional repressor C-terminal K09017 - - 0.00000000000000000000000000000000000000000000000000000000004169 214.0
BYD3_k127_4467283_0 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008664 574.0
BYD3_k127_4467283_1 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 447.0
BYD3_k127_4467283_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 404.0
BYD3_k127_4467283_3 calcium- and calmodulin-responsive adenylate cyclase activity K01113,K03641 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 387.0
BYD3_k127_4467283_4 FCD - - - 0.000000000000000000000000000000000000000000000000000000000000001328 242.0
BYD3_k127_4467283_5 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000002744 222.0
BYD3_k127_4467283_6 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000001368 233.0
BYD3_k127_4467283_7 Domain of unknown function (DUF427) - - - 0.000000000000000000000000000000000000000000000000000001969 194.0
BYD3_k127_4467283_8 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity K01118 - - 0.00000000000000000000000000003046 117.0
BYD3_k127_4471458_0 acyl-CoA dehydrogenase - - - 0.0 1042.0
BYD3_k127_4471458_1 PFAM aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 - 1.3.99.16 5e-324 1019.0
BYD3_k127_4471458_10 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006461 272.0
BYD3_k127_4471458_11 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.0000000000000000000000000000000000000000000000000000000000000002024 226.0
BYD3_k127_4471458_12 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000000000000000001031 216.0
BYD3_k127_4471458_13 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0000000000000000000000000000000000000000000001344 169.0
BYD3_k127_4471458_14 outer membrane lipoprotein K06077 - - 0.0000000000000000000000000000000000000000000007265 170.0
BYD3_k127_4471458_15 DsrE/DsrF-like family K06039 - - 0.0000000000000000000000000000000000000000000105 164.0
BYD3_k127_4471458_16 Lecithin retinol acyltransferase - - - 0.00000000000000000000000000000000000006129 148.0
BYD3_k127_4471458_17 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.000000000000000000000000000000003373 138.0
BYD3_k127_4471458_18 Lactonase, 7-bladed beta-propeller - - - 0.000000002123 70.0
BYD3_k127_4471458_19 COG0500 SAM-dependent methyltransferases - - - 0.000000004095 65.0
BYD3_k127_4471458_2 His Kinase A (phosphoacceptor) domain - - - 1.004e-251 806.0
BYD3_k127_4471458_3 PQQ-like domain K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 576.0
BYD3_k127_4471458_4 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006226 496.0
BYD3_k127_4471458_5 Fatty acid hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008999 469.0
BYD3_k127_4471458_6 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 426.0
BYD3_k127_4471458_7 HNH nucleases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 351.0
BYD3_k127_4471458_8 PFAM regulatory protein TetR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 311.0
BYD3_k127_4471458_9 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 302.0
BYD3_k127_449929_0 Protein of unknown function (DUF1615) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002911 413.0
BYD3_k127_449929_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006835 370.0
BYD3_k127_449929_2 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005338 343.0
BYD3_k127_449929_3 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003867 273.0
BYD3_k127_449929_4 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001388 282.0
BYD3_k127_449929_5 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000003752 203.0
BYD3_k127_449929_6 cyclic nucleotide binding K01420,K10914 - - 0.00000000000000000000000000000000000000000000000002302 183.0
BYD3_k127_449929_7 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000139 161.0
BYD3_k127_449929_8 Protein conserved in bacteria - - - 0.00000000000000000000000000000007501 126.0
BYD3_k127_449929_9 Tripartite tricarboxylate transporter family receptor - - - 0.0005787 45.0
BYD3_k127_4511485_0 CoA binding domain - - - 0.0 1202.0
BYD3_k127_4511485_1 Belongs to the TPP enzyme family K01577 - 4.1.1.8 1.724e-258 801.0
BYD3_k127_4511485_2 56kDa selenium binding protein (SBP56) K17285 - - 6.777e-255 794.0
BYD3_k127_4511485_3 CoA-transferase family III K07749,K14471,K14472 - 2.8.3.16,2.8.3.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 576.0
BYD3_k127_4511485_4 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 473.0
BYD3_k127_4511485_5 udp-glucose 4-epimerase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007145 465.0
BYD3_k127_4511485_6 - - - - 0.0000000000000000000000000000000000000000000000000000001107 205.0
BYD3_k127_4511485_7 Belongs to the binding-protein-dependent transport system permease family K10440 - - 0.000000000000000000000000000131 117.0
BYD3_k127_4519891_0 Resistance to Hg(2 ) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) K00520 - 1.16.1.1 1.498e-271 843.0
BYD3_k127_4519891_1 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 482.0
BYD3_k127_4519891_2 PFAM MotA TolQ ExbB proton channel K03561,K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 360.0
BYD3_k127_4519891_3 TonB C terminal K03646 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003235 248.0
BYD3_k127_4519891_4 Protein of unknown function (DUF3047) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001657 240.0
BYD3_k127_4519891_5 Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000000000000000000000000000000005332 201.0
BYD3_k127_453004_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003988 535.0
BYD3_k127_453004_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 443.0
BYD3_k127_453004_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000000000000000000000000005916 232.0
BYD3_k127_453004_11 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000000000000000000000000000000000000000000000000000904 203.0
BYD3_k127_453004_12 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000000000000000000000000000000008691 196.0
BYD3_k127_453004_13 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000000000000000000000000000000000001192 196.0
BYD3_k127_453004_14 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000000000000000000004575 186.0
BYD3_k127_453004_15 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000000000000007711 177.0
BYD3_k127_453004_16 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000000000000000000002106 176.0
BYD3_k127_453004_17 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000000000000000000000000000000006092 165.0
BYD3_k127_453004_18 binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000001672 147.0
BYD3_k127_453004_19 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000000000000005993 145.0
BYD3_k127_453004_2 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 395.0
BYD3_k127_453004_20 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000004166 104.0
BYD3_k127_453004_21 Ribosomal protein L30 K02907 - - 0.00000000000000000000007202 98.0
BYD3_k127_453004_22 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000000000000000004386 99.0
BYD3_k127_453004_3 Forms part of the polypeptide exit tunnel K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 381.0
BYD3_k127_453004_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 331.0
BYD3_k127_453004_5 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 297.0
BYD3_k127_453004_6 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 303.0
BYD3_k127_453004_7 Redoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 291.0
BYD3_k127_453004_8 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002418 267.0
BYD3_k127_453004_9 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000000000000000000009133 235.0
BYD3_k127_4537462_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0 1034.0
BYD3_k127_4537462_1 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007714 546.0
BYD3_k127_4537462_10 helix_turn_helix, Lux Regulon - - - 0.0000000000000004801 84.0
BYD3_k127_4537462_11 - - - - 0.0000000000007842 69.0
BYD3_k127_4537462_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 462.0
BYD3_k127_4537462_3 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 422.0
BYD3_k127_4537462_4 Uncharacterized protein conserved in bacteria (DUF2145) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 401.0
BYD3_k127_4537462_5 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009519 318.0
BYD3_k127_4537462_6 PFAM peptidase S1 and S6, chymotrypsin Hap - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005097 308.0
BYD3_k127_4537462_7 AsmA family K07289 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001262 275.0
BYD3_k127_4537462_8 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000008243 199.0
BYD3_k127_4537462_9 - - - - 0.00000000000000000000000000000003989 132.0
BYD3_k127_4542477_0 aldehyde oxidase and xanthine dehydrogenase a b hammerhead K13482 - 1.17.1.4 0.0 1169.0
BYD3_k127_4542477_1 CO dehydrogenase flavoprotein domain protein K13481 - 1.17.1.4 2.806e-195 621.0
BYD3_k127_4542477_10 TIGRFAM xanthine dehydrogenase accessory protein XdhC K07402 - - 0.000000000000000000000000000000000000000000000000000000000000002928 220.0
BYD3_k127_4542477_11 PFAM Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000417 168.0
BYD3_k127_4542477_12 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000002023 145.0
BYD3_k127_4542477_13 TIGRFAM xanthine dehydrogenase accessory protein XdhC K07402 - - 0.000000000000000000000000000000004711 136.0
BYD3_k127_4542477_14 import inner membrane translocase subunit Tim44 - - - 0.0000000000000000000000000000252 122.0
BYD3_k127_4542477_2 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 610.0
BYD3_k127_4542477_3 Guanine deaminase K01487 - 3.5.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008607 604.0
BYD3_k127_4542477_4 PFAM SMP-30 Gluconolaconase K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 496.0
BYD3_k127_4542477_5 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 430.0
BYD3_k127_4542477_6 Male sterility protein K18981 - 1.1.1.203 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005413 443.0
BYD3_k127_4542477_7 D-isomer specific 2-hydroxyacid dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 405.0
BYD3_k127_4542477_8 TRAP dicarboxylate transporter K21395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 406.0
BYD3_k127_4542477_9 FCD K05799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 308.0
BYD3_k127_4546517_0 RESPONSE REGULATOR receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 393.0
BYD3_k127_4546517_1 SMART Extracellular solute-binding protein, family 3 K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 367.0
BYD3_k127_4546517_2 PFAM metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008095 313.0
BYD3_k127_4546517_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002155 286.0
BYD3_k127_4546517_4 PFAM 5-carboxymethyl-2-hydroxymuconate isomerase K01826 - 5.3.3.10 0.00001148 48.0
BYD3_k127_4547131_0 PFAM Phospholipase D Transphosphatidylase K06132 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 532.0
BYD3_k127_4547131_1 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005438 420.0
BYD3_k127_4547131_2 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006796 269.0
BYD3_k127_4547131_3 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000006817 240.0
BYD3_k127_4547131_4 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000001251 248.0
BYD3_k127_4547131_5 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000000000000000009019 205.0
BYD3_k127_4547131_6 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000001476 184.0
BYD3_k127_4547131_7 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000005087 140.0
BYD3_k127_4547131_8 Bacterial extracellular solute-binding protein K02055 - - 0.0000000000000000001474 103.0
BYD3_k127_4556145_0 Short-chain dehydrogenase reductase sdr K00034 - 1.1.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 372.0
BYD3_k127_4556145_1 - - - - 0.000000000000000000000000000004029 133.0
BYD3_k127_4556145_2 glutathione transferase activity - - - 0.00000000000000007635 92.0
BYD3_k127_4564463_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 2.908e-216 683.0
BYD3_k127_4564463_1 TIGRFAM phosphate regulon sensor kinase PhoR K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 514.0
BYD3_k127_4564463_2 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 297.0
BYD3_k127_4564463_3 Belongs to the bacterial ribosomal protein bL31 family K02909 - - 0.000000000000000000000000000000000000000000000004423 174.0
BYD3_k127_4564463_4 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000008286 73.0
BYD3_k127_4566862_0 Belongs to the IlvD Edd family K01690 - 4.2.1.12 1.994e-305 945.0
BYD3_k127_4566862_1 Glycosyl hydrolases family 43 K01198 - 3.2.1.37 5.787e-262 839.0
BYD3_k127_4566862_2 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 381.0
BYD3_k127_4566862_3 Protein conserved in bacteria K09992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006512 349.0
BYD3_k127_4566862_4 2-dehydro-3-deoxyphosphogluconate aldolase 4-hydroxy-2-oxoglutarate aldolase K01625 - 4.1.2.14,4.1.3.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006853 325.0
BYD3_k127_4566862_5 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004478 280.0
BYD3_k127_4566862_6 Peptidase_C39 like family - - - 0.00000000000000000000000000000002166 130.0
BYD3_k127_4571191_0 Belongs to the ParA family K04562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 370.0
BYD3_k127_4571191_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 340.0
BYD3_k127_4571191_2 Smr domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002122 244.0
BYD3_k127_4571191_3 Bacterial-like globin K06886 - - 0.0000000000000000000000000000000000000000000000000000001147 210.0
BYD3_k127_4582498_0 Cytochrome C biogenesis protein transmembrane region K04084,K08344 - 1.8.1.8 7.773e-239 762.0
BYD3_k127_4582498_1 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 400.0
BYD3_k127_4582498_2 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003728 266.0
BYD3_k127_4582498_3 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000002191 167.0
BYD3_k127_4582498_4 heme binding - - - 0.0002915 50.0
BYD3_k127_4594027_0 Flagellar protein export ATPase FliI K02412 - 3.6.3.14 2.839e-234 731.0
BYD3_k127_4594027_1 The M ring may be actively involved in energy transduction K02409 - - 3.101e-213 677.0
BYD3_k127_4594027_10 Type II transport protein GspH K08084,K08085 - - 0.000000000000000000000273 103.0
BYD3_k127_4594027_11 flagellar export protein FliJ K02413 - - 0.000000000000000000005258 106.0
BYD3_k127_4594027_12 Flagellar biosynthesis protein, FliO K02418 - - 0.000000004104 69.0
BYD3_k127_4594027_13 Type IV minor pilin ComP, DNA uptake sequence receptor - - - 0.0000002273 58.0
BYD3_k127_4594027_2 Flagellar motor switch K02416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 543.0
BYD3_k127_4594027_3 flagellar motor switch protein K02410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 538.0
BYD3_k127_4594027_4 Flagellar motor switch protein fliN K02417,K03225 - - 0.00000000000000000000000000000000000000000000000003217 179.0
BYD3_k127_4594027_5 flagellar assembly protein FliH K02411 - - 0.000000000000000000000000000000000000000000000002627 181.0
BYD3_k127_4594027_6 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000000000001612 171.0
BYD3_k127_4594027_7 Flagellar hook-basal body complex protein FliE K02408 - - 0.0000000000000000000000000000000006283 134.0
BYD3_k127_4594027_8 Flagellar hook-length control protein K02414 - - 0.00000000000000000000000000000001916 142.0
BYD3_k127_4594027_9 Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility - - - 0.0000000000000000000000009633 104.0
BYD3_k127_459847_0 Molecular chaperone. Has ATPase activity K04079 - - 0.0 1034.0
BYD3_k127_459847_1 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000000003993 222.0
BYD3_k127_459847_2 Sodium hydrogen exchanger - - - 0.0000000000000000000000000000000000000000000000000000000419 203.0
BYD3_k127_459847_3 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.00000000000001533 76.0
BYD3_k127_4609534_0 D-aminoacylase domain protein K06015 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.5.1.81 8.489e-260 809.0
BYD3_k127_4609534_1 Saccharopine dehydrogenase NADP binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007466 385.0
BYD3_k127_4609534_2 Serine threonine protein kinase involved in cell cycle control - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 368.0
BYD3_k127_4609534_3 Binding-protein-dependent transport system inner membrane component K02054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 338.0
BYD3_k127_4609534_4 Binding-protein-dependent transport system inner membrane component K02053 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 333.0
BYD3_k127_4609534_5 Protein of unknown function (DUF3037) - - - 0.00000000000000000000000000000000000000154 155.0
BYD3_k127_4609534_6 Bacterial extracellular solute-binding protein K02055 - - 0.00000000000000000000002393 100.0
BYD3_k127_4616569_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000925 587.0
BYD3_k127_4616569_1 Domain of unknown function (DUF3482) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 553.0
BYD3_k127_4616569_2 Protein of unknown function (DUF2868) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007438 346.0
BYD3_k127_4616569_3 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005558 281.0
BYD3_k127_4616569_4 PAS fold - - - 0.000000000000000000000000000000000000000000000000000009174 211.0
BYD3_k127_4616569_5 cheY-homologous receiver domain K11443 - - 0.000000000000000000000000000000000008709 139.0
BYD3_k127_4621788_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0 1018.0
BYD3_k127_4621788_1 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 1.588e-263 831.0
BYD3_k127_4621788_10 - - - - 0.0000000000000000000000001584 118.0
BYD3_k127_4621788_11 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000001322 80.0
BYD3_k127_4621788_2 Belongs to the cysteine synthase cystathionine beta- synthase family K01697,K01738 - 2.5.1.47,4.2.1.22 5.495e-228 713.0
BYD3_k127_4621788_3 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01739,K01758,K01760,K01761 - 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 1.933e-198 634.0
BYD3_k127_4621788_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 2.269e-196 616.0
BYD3_k127_4621788_5 Phosphoglycerate mutase family K15634 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003498 283.0
BYD3_k127_4621788_6 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000006074 249.0
BYD3_k127_4621788_7 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000001 233.0
BYD3_k127_4621788_8 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000000000006556 203.0
BYD3_k127_4621788_9 Thioredoxin K00384 - 1.8.1.9 0.00000000000000000000000000001762 121.0
BYD3_k127_4621876_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 4.779e-281 876.0
BYD3_k127_4621876_1 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000001953 169.0
BYD3_k127_4621876_2 Phosphotransferase system, mannose fructose-specific component IIA K02821 - 2.7.1.194 0.000000000000000000000000000000000000003624 158.0
BYD3_k127_4621876_3 TIGRFAM phosphocarrier, HPr family K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000001156 109.0
BYD3_k127_4630817_0 Alcohol dehydrogenase GroES-like domain - - - 1.57e-215 677.0
BYD3_k127_4630817_1 glycosyl transferase group 1 K00696 - 2.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006242 502.0
BYD3_k127_4630817_10 D,D-heptose 1,7-bisphosphate phosphatase - - - 0.000000000000000000000000000000000000000000000000000000001595 208.0
BYD3_k127_4630817_11 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon K00966,K03273,K15669 - 2.7.7.13,2.7.7.71,3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000005083 192.0
BYD3_k127_4630817_12 Right handed beta helix region - - - 0.000000000000000000000000000000000000000000000002382 194.0
BYD3_k127_4630817_13 Glycosyl transferase 4-like - - - 0.00000000000000000000000000000000000000000000004175 188.0
BYD3_k127_4630817_14 - - - - 0.000000000000000000000000000000000000007817 161.0
BYD3_k127_4630817_15 Cyclase dehydrase - - - 0.00000000000000000000000000000000000003774 152.0
BYD3_k127_4630817_16 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.0004391 52.0
BYD3_k127_4630817_2 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 374.0
BYD3_k127_4630817_3 protein involved in exopolysaccharide biosynthesis K16692 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002719 368.0
BYD3_k127_4630817_4 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009617 317.0
BYD3_k127_4630817_5 Bacterial sugar transferase K00996 - 2.7.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000002318 265.0
BYD3_k127_4630817_6 TupA-like ATPgrasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003037 287.0
BYD3_k127_4630817_7 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003506 273.0
BYD3_k127_4630817_8 PFAM glycosyl transferase family 9 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000525 261.0
BYD3_k127_4630817_9 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000004135 246.0
BYD3_k127_4635359_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 414.0
BYD3_k127_4635359_1 protein conserved in bacteria K09990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 365.0
BYD3_k127_4635359_2 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 346.0
BYD3_k127_4635359_3 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 318.0
BYD3_k127_4635359_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K16871 - 2.6.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 289.0
BYD3_k127_4635359_5 Esterase PHB depolymerase K03932 - - 0.000000000000000000000000000000000000000000000000000000000000004165 228.0
BYD3_k127_4635359_6 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000049 194.0
BYD3_k127_4635359_7 Protein of unknown function (DUF3297) - - - 0.000000000000000000000000000000000000000616 149.0
BYD3_k127_4635359_8 - - - - 0.00000000000000009983 85.0
BYD3_k127_4635359_9 - - - - 0.00000000001395 68.0
BYD3_k127_4642227_0 AMP-binding enzyme K12508 - 6.2.1.34 1.905e-273 866.0
BYD3_k127_4642227_1 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 363.0
BYD3_k127_4642227_2 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000005504 185.0
BYD3_k127_4642227_3 - - - - 0.0000000002053 68.0
BYD3_k127_4647803_0 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 507.0
BYD3_k127_4647803_1 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 381.0
BYD3_k127_4647803_2 ThiF family K22132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 351.0
BYD3_k127_4647803_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 298.0
BYD3_k127_4647803_4 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000002291 178.0
BYD3_k127_4654086_0 Methionine gamma-lyase K01761 - 4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 468.0
BYD3_k127_4654086_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002082 308.0
BYD3_k127_4654086_2 LytTr DNA-binding domain K08083 - - 0.00000000000000000000000000000000000000000000000000000000000000000002226 242.0
BYD3_k127_4654086_3 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001457 236.0
BYD3_k127_4654086_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000001522 79.0
BYD3_k127_4657025_0 Belongs to the argininosuccinate synthase family. Type 2 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 4.793e-261 809.0
BYD3_k127_4657025_1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 359.0
BYD3_k127_4657025_2 Protein of unknown function (DUF1624) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009381 347.0
BYD3_k127_4657025_3 COG1073 hydrolases of the alpha beta superfamily K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006384 267.0
BYD3_k127_4657025_4 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000002428 191.0
BYD3_k127_4662175_0 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.0 1155.0
BYD3_k127_4662175_1 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 1.093e-266 832.0
BYD3_k127_4662175_10 Belongs to the SUA5 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 359.0
BYD3_k127_4662175_11 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 314.0
BYD3_k127_4662175_12 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006181 259.0
BYD3_k127_4662175_13 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001834 241.0
BYD3_k127_4662175_14 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000000000000000000000000002049 240.0
BYD3_k127_4662175_15 Copper chaperone PCu(A)C K09796 - - 0.0000000000000000000000000000000000000000000000000000009583 196.0
BYD3_k127_4662175_16 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000001046 175.0
BYD3_k127_4662175_17 - - - - 0.0000000000000000000006154 98.0
BYD3_k127_4662175_18 Belongs to the glycosyl hydrolase family 6 K19668 - 3.2.1.91 0.0005027 53.0
BYD3_k127_4662175_2 formate hydrogenlyase subunit 3 multisubunit Na H antiporter, MnhD subunit K05568,K12137 - - 1.445e-249 781.0
BYD3_k127_4662175_3 COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005366 572.0
BYD3_k127_4662175_4 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 513.0
BYD3_k127_4662175_5 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 424.0
BYD3_k127_4662175_6 SMART phosphoesterase PHP domain protein K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009448 405.0
BYD3_k127_4662175_7 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 398.0
BYD3_k127_4662175_8 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 385.0
BYD3_k127_4662175_9 Glucose sorbosone K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007154 373.0
BYD3_k127_4663385_0 Malate/L-lactate dehydrogenase K16844 - 1.1.1.338 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006681 511.0
BYD3_k127_4663385_1 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 442.0
BYD3_k127_4663385_2 ATPase MipZ K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001152 286.0
BYD3_k127_4663385_3 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000116 213.0
BYD3_k127_4663385_4 LysE type translocator K03329 - - 0.000000000000000000000000000000000000000000000000001762 189.0
BYD3_k127_4663385_5 Tautomerase enzyme - - - 0.00000000000000000000000000000000000000000002621 168.0
BYD3_k127_4663385_6 acetyltransferase - - - 0.0000000000000000000000000000000000000007471 153.0
BYD3_k127_4663385_7 Domain of unknown function (DUF4864) - - - 0.0000000000000000000000000001318 121.0
BYD3_k127_4665534_0 Indolepyruvate ferredoxin oxidoreductase K00179 - 1.2.7.8 0.0 1168.0
BYD3_k127_4665534_1 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 7.049e-198 634.0
BYD3_k127_4665534_2 PFAM glycosyl transferase family 2 K03669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007768 618.0
BYD3_k127_4665534_3 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 595.0
BYD3_k127_4665534_4 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001206 293.0
BYD3_k127_4665534_5 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006631 257.0
BYD3_k127_4721951_0 Amylo-alpha-1,6-glucosidase - - - 5.379e-284 893.0
BYD3_k127_4721951_1 peptidase dimerisation domain protein K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 524.0
BYD3_k127_4721951_10 Tellurite resistance protein TerB - - - 0.000000000000000000000000000000000000000008273 158.0
BYD3_k127_4721951_2 transmembrane transporter activity K18138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 501.0
BYD3_k127_4721951_3 Outer membrane efflux protein K18139,K18323 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005445 524.0
BYD3_k127_4721951_4 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000863 496.0
BYD3_k127_4721951_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008952 377.0
BYD3_k127_4721951_6 Nucleotidyl transferase of unknown function (DUF2204) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003538 322.0
BYD3_k127_4721951_7 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 291.0
BYD3_k127_4721951_8 deoxyhypusine monooxygenase activity K05384,K05386 - - 0.00000000000000000000000000000000000000000000000002979 186.0
BYD3_k127_4721951_9 - - - - 0.0000000000000000000000000000000000000000000001489 176.0
BYD3_k127_4766633_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0 1123.0
BYD3_k127_4766633_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1121.0
BYD3_k127_4766633_10 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000001626 246.0
BYD3_k127_4766633_11 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000000000000000000000000000000000000000000000009297 215.0
BYD3_k127_4766633_12 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000000000003622 211.0
BYD3_k127_4766633_13 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000000000000000000000000002165 211.0
BYD3_k127_4766633_14 RDD family - - - 0.0000000000000000000000000000000000000000000000000000000003316 210.0
BYD3_k127_4766633_15 regulatory protein, MerR - - - 0.00000000000000000000000000000000000000000000004114 173.0
BYD3_k127_4766633_16 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.000000000000000000000000000000000000000000004522 170.0
BYD3_k127_4766633_17 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000000000000000001841 127.0
BYD3_k127_4766633_18 Protein of unknown function (DUF3106) - - - 0.0000000000122 66.0
BYD3_k127_4766633_2 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1107.0
BYD3_k127_4766633_3 Insulinase (Peptidase family M16) K07263 - - 0.0 1043.0
BYD3_k127_4766633_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 6.875e-274 857.0
BYD3_k127_4766633_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 580.0
BYD3_k127_4766633_6 Domain of unknown function (DUF4331) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007182 569.0
BYD3_k127_4766633_7 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007466 537.0
BYD3_k127_4766633_8 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006061 333.0
BYD3_k127_4766633_9 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005011 322.0
BYD3_k127_4771831_0 Pfam:HipA_N K07154 - 2.7.11.1 1.41e-213 671.0
BYD3_k127_4771831_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006033 610.0
BYD3_k127_4771831_10 transcriptional regulators - - - 0.0000000000000000000000000000000000000000000004494 169.0
BYD3_k127_4771831_2 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 559.0
BYD3_k127_4771831_3 PFAM FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005988 548.0
BYD3_k127_4771831_4 PFAM ABC transporter related K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008493 481.0
BYD3_k127_4771831_5 inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 460.0
BYD3_k127_4771831_6 binding-protein-dependent transport systems inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 360.0
BYD3_k127_4771831_7 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 289.0
BYD3_k127_4771831_8 MafB19-like deaminase - - - 0.000000000000000000000000000000000000000000000000000000000000000000007115 237.0
BYD3_k127_4771831_9 - - - - 0.000000000000000000000000000000000000000000000000000007899 194.0
BYD3_k127_4773350_0 Pyrrolo-quinoline quinone - - - 0.0 1202.0
BYD3_k127_4773350_1 Transcriptional regulator K13641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 400.0
BYD3_k127_4773350_2 Trehalose utilisation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008844 368.0
BYD3_k127_4786243_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1316.0
BYD3_k127_4786243_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 1.841e-231 723.0
BYD3_k127_4786243_10 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000000000000000000001311 199.0
BYD3_k127_4786243_11 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000003683 181.0
BYD3_k127_4786243_12 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.7.2.4 0.0000000000000000000000000001238 117.0
BYD3_k127_4786243_13 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000000002147 116.0
BYD3_k127_4786243_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006306 567.0
BYD3_k127_4786243_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004564 465.0
BYD3_k127_4786243_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 459.0
BYD3_k127_4786243_5 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003885 367.0
BYD3_k127_4786243_6 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 335.0
BYD3_k127_4786243_7 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 292.0
BYD3_k127_4786243_8 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000001713 265.0
BYD3_k127_4786243_9 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000002347 271.0
BYD3_k127_47882_0 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 487.0
BYD3_k127_47882_1 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 316.0
BYD3_k127_47882_2 Regulatory protein GntR HTH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 289.0
BYD3_k127_47882_3 PFAM Fatty acid hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000002598 230.0
BYD3_k127_47882_4 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000183 145.0
BYD3_k127_47882_5 TIGRFAM TRAP dicarboxylate transporter, DctP subunit - - - 0.0000000000000000003432 89.0
BYD3_k127_481276_0 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 472.0
BYD3_k127_481276_1 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 439.0
BYD3_k127_481276_2 Membrane protein involved in the export of O-antigen and teichoic acid K03328 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 313.0
BYD3_k127_481276_3 Pkd domain containing protein - - - 0.00000000000007416 81.0
BYD3_k127_4846366_0 Belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 2.027e-274 850.0
BYD3_k127_4846366_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 5.475e-244 785.0
BYD3_k127_4846366_2 acyl-CoA transferases carnitine dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 458.0
BYD3_k127_4846366_3 Diguanylate cyclase, GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 315.0
BYD3_k127_4846366_4 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 302.0
BYD3_k127_4846366_5 acyl-CoA dehydrogenase K00252 - 1.3.8.6 0.00000000000000000000000000000000000000001666 153.0
BYD3_k127_4869224_0 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000856 477.0
BYD3_k127_4869224_1 Beta-ketoacyl synthase, C-terminal domain K00647,K09458 - 2.3.1.179,2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 462.0
BYD3_k127_4869224_10 esterase - - - 0.000000000000000000000000000000000000000005617 171.0
BYD3_k127_4869224_11 dehydratase - - - 0.00000000000000000000000000000000000000006198 168.0
BYD3_k127_4869224_12 Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively K18916 - 1.20.1.1 0.0000000008232 61.0
BYD3_k127_4869224_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006175 462.0
BYD3_k127_4869224_3 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 368.0
BYD3_k127_4869224_4 NmrA-like family K07118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003925 276.0
BYD3_k127_4869224_5 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001172 270.0
BYD3_k127_4869224_6 polysaccharide deacetylase K01452 - 3.5.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000006707 255.0
BYD3_k127_4869224_7 Beta-ketoacyl synthase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001109 261.0
BYD3_k127_4869224_8 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000019 203.0
BYD3_k127_4869224_9 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000479 203.0
BYD3_k127_4874591_0 Protein of unknown function (DUF521) K09123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 432.0
BYD3_k127_4874591_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007053 268.0
BYD3_k127_4874591_2 Protein of unknown function DUF126 K09128 - - 0.0000000000000000000000000000000000000000000000000000000000000008635 229.0
BYD3_k127_4874591_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000003744 163.0
BYD3_k127_4874591_4 lactoylglutathione lyase activity - - - 0.000000000000000000000000008814 116.0
BYD3_k127_4876747_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009439 571.0
BYD3_k127_4876747_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 371.0
BYD3_k127_4876747_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004695 366.0
BYD3_k127_4876747_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001669 252.0
BYD3_k127_4876747_4 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000004642 220.0
BYD3_k127_4894327_0 glutaminyl-tRNA synthetase K01886 - 6.1.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006408 600.0
BYD3_k127_4894327_1 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 552.0
BYD3_k127_4894327_2 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000002929 241.0
BYD3_k127_4894327_3 Phosphopantetheine attachment site K02078 - - 0.0000000000000000000001589 99.0
BYD3_k127_4905289_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 536.0
BYD3_k127_4905289_1 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002325 274.0
BYD3_k127_4905289_2 cell septum assembly - - - 0.00000000000000000000000000000000000000000000000000000000000000001688 239.0
BYD3_k127_4905289_3 FMN binding K00484,K14482 - 1.5.1.36 0.00000000000000000000000000000000000000000001011 172.0
BYD3_k127_4905289_4 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000006399 134.0
BYD3_k127_4905289_5 EthD domain - - - 0.00000000000000000000000003978 113.0
BYD3_k127_4905289_6 - - - - 0.00000000000000000000005937 108.0
BYD3_k127_4905289_8 - - - - 0.000455 49.0
BYD3_k127_4927912_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.036e-310 972.0
BYD3_k127_4927912_1 Histidine kinase K07638 - 2.7.13.3 2.789e-215 677.0
BYD3_k127_4927912_10 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000006414 75.0
BYD3_k127_4927912_12 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.0005285 46.0
BYD3_k127_4927912_2 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 531.0
BYD3_k127_4927912_3 PFAM response regulator receiver K02483,K07659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 472.0
BYD3_k127_4927912_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K00019 - 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 417.0
BYD3_k127_4927912_5 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 417.0
BYD3_k127_4927912_6 Protein of unknown function (DUF541) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004217 263.0
BYD3_k127_4927912_7 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000001277 233.0
BYD3_k127_4927912_8 - - - - 0.00000000000000000000000000000000000000001644 160.0
BYD3_k127_4927912_9 polysaccharide catabolic process K02388,K02396 - - 0.0000000000000007812 83.0
BYD3_k127_4932060_0 Belongs to the 5'-nucleotidase family K01081,K17224 - 3.1.3.5 1.741e-248 777.0
BYD3_k127_4932060_1 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00758 - 2.4.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005138 443.0
BYD3_k127_4932060_2 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783,K03815 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 310.0
BYD3_k127_4932060_3 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000009679 224.0
BYD3_k127_4932060_4 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000246 186.0
BYD3_k127_4932060_5 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.00000000000000000000000000000000000000001505 158.0
BYD3_k127_4947035_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1130.0
BYD3_k127_4947035_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 1.026e-228 730.0
BYD3_k127_4947035_10 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000000000000000195 86.0
BYD3_k127_4947035_2 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 592.0
BYD3_k127_4947035_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 559.0
BYD3_k127_4947035_4 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 545.0
BYD3_k127_4947035_5 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 529.0
BYD3_k127_4947035_6 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 468.0
BYD3_k127_4947035_7 Phosphoribosyl transferase domain K07101 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 328.0
BYD3_k127_4947035_8 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000000000000000000000000008215 157.0
BYD3_k127_4947035_9 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.000000000000000000000000000000000001093 143.0
BYD3_k127_4953376_0 Strictosidine synthase K10440 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 527.0
BYD3_k127_4953376_1 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 486.0
BYD3_k127_4953376_2 Belongs to the GST superfamily K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 330.0
BYD3_k127_4953376_3 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 313.0
BYD3_k127_4953376_4 infection protein K07052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001638 267.0
BYD3_k127_4953376_5 Glycine zipper 2TM domain - - - 0.000000000000000000000000000000000000000000000000001362 194.0
BYD3_k127_4953376_6 - - - - 0.00000000000000000000000000000000000000005044 163.0
BYD3_k127_4953376_7 PFAM helix-turn-helix- domain containing protein, AraC type K07506 - - 0.000000000000000000000000000003235 138.0
BYD3_k127_4953376_8 Lysylphosphatidylglycerol synthase TM region K07027,K14205 - 2.3.2.3 0.00000000000000000000000009247 122.0
BYD3_k127_4953376_9 Tannase and feruloyl esterase - - - 0.0000000000000000007127 98.0
BYD3_k127_4957234_0 ABC-type dipeptide transport system, periplasmic component K02035 - - 1.868e-250 782.0
BYD3_k127_4957234_1 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 8.183e-215 697.0
BYD3_k127_4957234_10 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 303.0
BYD3_k127_4957234_11 DsbA oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004481 283.0
BYD3_k127_4957234_12 Adenylate cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000002772 187.0
BYD3_k127_4957234_13 dihydrofolate reductase activity - - - 0.00000000000000000000000000000000000000000007328 168.0
BYD3_k127_4957234_14 Arac family - - - 0.0000000000000000000000000000000002588 144.0
BYD3_k127_4957234_15 Ring hydroxylating subunit beta family protein 1 - - - 0.000000000000000000007415 108.0
BYD3_k127_4957234_16 MarR family - - - 0.00000000003629 72.0
BYD3_k127_4957234_2 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 512.0
BYD3_k127_4957234_3 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006657 445.0
BYD3_k127_4957234_4 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 431.0
BYD3_k127_4957234_5 nitrilase K01501,K01502 - 3.5.5.1,3.5.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006775 414.0
BYD3_k127_4957234_6 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 406.0
BYD3_k127_4957234_7 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007771 388.0
BYD3_k127_4957234_8 leucine import across plasma membrane K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 379.0
BYD3_k127_4957234_9 ATPases associated with a variety of cellular activities K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 379.0
BYD3_k127_4957508_0 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 431.0
BYD3_k127_4957508_1 Thioesterase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002107 288.0
BYD3_k127_4957508_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000319 117.0
BYD3_k127_4957508_3 Protein of unknown function (DUF3072) - - - 0.000000000000000002415 86.0
BYD3_k127_4970617_0 Glucose dehydrogenase C-terminus K08322 - 1.1.1.380 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 505.0
BYD3_k127_4970617_1 PFAM Mannitol dehydrogenase K00041 - 1.1.1.58 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 469.0
BYD3_k127_4970617_2 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 340.0
BYD3_k127_4970617_3 FCD K05799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001487 269.0
BYD3_k127_4970617_4 COG1247 Sortase and related acyltransferases K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000004759 182.0
BYD3_k127_5004802_0 Diguanylate cyclase - - - 4.103e-202 657.0
BYD3_k127_5004802_1 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 430.0
BYD3_k127_5004802_2 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0017076,GO:0017111,GO:0019001,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046906,GO:0047727,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564 5.4.99.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 411.0
BYD3_k127_5004802_3 helix_turn_helix ASNC type - - - 0.00000000000000000000000000000000000000000000000000000000000000009717 223.0
BYD3_k127_5016757_0 NADH-quinone oxidoreductase K00336 - 1.6.5.3 0.0 1150.0
BYD3_k127_5016757_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 7.507e-267 825.0
BYD3_k127_5016757_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 4.934e-259 805.0
BYD3_k127_5016757_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009229 571.0
BYD3_k127_5016757_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 338.0
BYD3_k127_5016757_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 326.0
BYD3_k127_5016757_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 313.0
BYD3_k127_5016757_7 NADH dehydrogenase K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000005561 271.0
BYD3_k127_5016757_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000001578 221.0
BYD3_k127_5016757_9 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000001037 186.0
BYD3_k127_5028310_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1849.0
BYD3_k127_5028310_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 6.852e-262 816.0
BYD3_k127_5028310_2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000001244 130.0
BYD3_k127_5028310_3 Protein of unknown function (DUF2933) - - - 0.000000001678 63.0
BYD3_k127_5028407_0 ABC transporter substrate-binding protein PnrA-like K02058,K07335 - - 2.639e-197 621.0
BYD3_k127_5028407_1 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 566.0
BYD3_k127_5028407_2 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 439.0
BYD3_k127_5028407_3 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 426.0
BYD3_k127_5028407_4 Nitrile hydratase, alpha chain K01721 - 4.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 342.0
BYD3_k127_5028407_5 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000009419 273.0
BYD3_k127_5028407_6 Nitrile hydratase beta subunit - - - 0.00000000000000000000000000000000000000003297 161.0
BYD3_k127_5028407_7 Cobalt uptake substrate-specific transmembrane region - - - 0.000000000000002162 77.0
BYD3_k127_5113154_0 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 484.0
BYD3_k127_5113154_1 Flotillin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005614 299.0
BYD3_k127_5113154_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001999 271.0
BYD3_k127_5113154_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000001242 227.0
BYD3_k127_5113154_4 Glyoxalase bleomycin resistance - - - 0.00000000000000000000000000000000000000000000000000007544 189.0
BYD3_k127_5113154_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000003183 151.0
BYD3_k127_5119594_0 TonB dependent receptor K02014 - - 7.106e-240 771.0
BYD3_k127_5119594_1 TonB-dependent siderophore receptor K16088 - - 9.566e-238 756.0
BYD3_k127_5119594_2 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000000000000023 115.0
BYD3_k127_5119594_3 Iron permease FTR1 K07243 - - 0.0000000000007527 71.0
BYD3_k127_5163252_0 Molybdopterin oxidoreductase Fe4S4 domain K21307 - 1.8.5.6 0.0 1728.0
BYD3_k127_5163252_1 4Fe-4S binding domain K21308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 448.0
BYD3_k127_5163252_2 Rhodanese Homology Domain - - - 0.000000000000000000005776 96.0
BYD3_k127_5199824_0 Pfam Sulfatase K01133 - 3.1.6.6 1.336e-296 918.0
BYD3_k127_5199824_1 Aldehyde dehydrogenase family K00128 - 1.2.1.3 2.433e-270 837.0
BYD3_k127_5199824_10 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 334.0
BYD3_k127_5199824_11 Amidase K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000001639 205.0
BYD3_k127_5199824_12 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000000006359 174.0
BYD3_k127_5199824_13 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000006297 165.0
BYD3_k127_5199824_14 Transcriptional regulator - - - 0.0000000000000000000000001514 111.0
BYD3_k127_5199824_15 - - - - 0.0000000000000000000007789 98.0
BYD3_k127_5199824_16 - - - - 0.00000000000000002851 92.0
BYD3_k127_5199824_17 - - - - 0.000000000009607 72.0
BYD3_k127_5199824_2 CoA-transferase family III K07749 - 2.8.3.16 3.251e-205 644.0
BYD3_k127_5199824_3 Aldolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 463.0
BYD3_k127_5199824_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 450.0
BYD3_k127_5199824_5 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 451.0
BYD3_k127_5199824_6 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 417.0
BYD3_k127_5199824_7 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 385.0
BYD3_k127_5199824_8 mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 379.0
BYD3_k127_5199824_9 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 354.0
BYD3_k127_5201251_0 Tripartite tricarboxylate transporter TctA family K07793 - - 4.881e-272 842.0
BYD3_k127_5201251_1 Oxidoreductase domain protein - - - 3.777e-255 809.0
BYD3_k127_5201251_10 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000002963 123.0
BYD3_k127_5201251_11 phosphonoacetaldehyde hydrolase activity - - - 0.0000000005978 71.0
BYD3_k127_5201251_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007637 598.0
BYD3_k127_5201251_3 Transcriptional regulator K21703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 435.0
BYD3_k127_5201251_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004149 403.0
BYD3_k127_5201251_5 Belongs to the TPP enzyme family K01577 - 4.1.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009882 349.0
BYD3_k127_5201251_6 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 329.0
BYD3_k127_5201251_7 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005708 280.0
BYD3_k127_5201251_8 Domain of unknown function (DUF374) K09778 - - 0.00000000000000000000000000000000000000000000000000000000000000000004256 239.0
BYD3_k127_5201251_9 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000000000000000000000000003115 181.0
BYD3_k127_5205985_0 Diguanylate cyclase - - - 2.437e-227 737.0
BYD3_k127_5205985_1 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 8.654e-219 686.0
BYD3_k127_5205985_2 PFAM peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 493.0
BYD3_k127_5205985_3 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 434.0
BYD3_k127_5205985_4 PFAM Phosphoglycerate mutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004369 296.0
BYD3_k127_5205985_5 CitB domain protein K13795 - - 0.00000000000000001374 82.0
BYD3_k127_5244280_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005182 464.0
BYD3_k127_5244280_1 PFAM Cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 349.0
BYD3_k127_5244280_2 Transcriptional regulatory protein, C terminal K11329 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 329.0
BYD3_k127_5244280_3 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000006843 169.0
BYD3_k127_5244280_4 LTXXQ motif family protein - - - 0.00000000000000000000000000000000000000000197 162.0
BYD3_k127_5244280_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000006911 121.0
BYD3_k127_5244280_6 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000001897 87.0
BYD3_k127_5245737_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009885 559.0
BYD3_k127_5245737_1 3-beta hydroxysteroid dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 501.0
BYD3_k127_5245737_2 UbiA prenyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 392.0
BYD3_k127_5245737_3 - - - - 0.00000000000000000005934 90.0
BYD3_k127_5245737_4 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000002343 51.0
BYD3_k127_5245737_5 Sulfatase-modifying factor enzyme 1 - - - 0.0007898 52.0
BYD3_k127_5246476_0 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 6.267e-237 749.0
BYD3_k127_5246476_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 417.0
BYD3_k127_5246476_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009056 276.0
BYD3_k127_5246476_3 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000000000000000000000000000002654 225.0
BYD3_k127_5246476_4 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000004511 162.0
BYD3_k127_5246476_5 Bacteriophage replication gene A protein (GPA) - - - 0.00000000002966 64.0
BYD3_k127_5248805_0 PFAM extracellular solute-binding protein, family 5 K02035 - - 2.998e-252 788.0
BYD3_k127_5248805_1 cytochrome P450 - - - 7.557e-205 653.0
BYD3_k127_5248805_2 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005827 490.0
BYD3_k127_5248805_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 431.0
BYD3_k127_5248805_4 Helix-turn-helix domain, rpiR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000088 385.0
BYD3_k127_5248805_5 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K18954 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003885 293.0
BYD3_k127_5248805_6 Zn-dependent proteases and their inactivated homologs K03592 - - 0.0000000004954 60.0
BYD3_k127_5248805_7 D-aminoacylase domain protein K01461,K06015 - 3.5.1.81,3.5.1.82 0.0009509 51.0
BYD3_k127_5253574_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0017076,GO:0017111,GO:0019001,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046906,GO:0047727,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564 5.4.99.13 0.0 1562.0
BYD3_k127_5253574_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1224.0
BYD3_k127_5253574_2 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 343.0
BYD3_k127_5253574_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005458 306.0
BYD3_k127_5253574_4 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000004093 206.0
BYD3_k127_5253574_5 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000000000000004834 134.0
BYD3_k127_5253574_6 Domain of unknown function (DUF4398) - - - 0.00000000008134 69.0
BYD3_k127_5256820_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1359.0
BYD3_k127_5256820_1 PFAM alpha beta hydrolase fold K00433 - 1.11.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 317.0
BYD3_k127_5256820_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000009157 192.0
BYD3_k127_5266454_0 Tetratricopeptide repeat - - - 0.0 1247.0
BYD3_k127_5266454_1 belongs to the aldehyde dehydrogenase family K00151 - 1.2.1.60 4.733e-274 848.0
BYD3_k127_5266454_10 Fumarylacetoacetate (FAA) hydrolase family K05921 - 4.1.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000577 273.0
BYD3_k127_5266454_11 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003454 267.0
BYD3_k127_5266454_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004052 250.0
BYD3_k127_5266454_13 Glutathione peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004984 252.0
BYD3_k127_5266454_14 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000002456 243.0
BYD3_k127_5266454_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001753 239.0
BYD3_k127_5266454_16 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000000000000000000006232 205.0
BYD3_k127_5266454_17 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000000000000000000000004838 200.0
BYD3_k127_5266454_18 Protein of unknown function (DUF2889) - - - 0.000000000000000000000000000000000000000000000001193 180.0
BYD3_k127_5266454_19 - - - - 0.00000000000000000000000000000000000000206 153.0
BYD3_k127_5266454_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 604.0
BYD3_k127_5266454_20 - - - - 0.000000000000000000000000000002733 130.0
BYD3_k127_5266454_3 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 - 1.13.11.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 534.0
BYD3_k127_5266454_4 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 462.0
BYD3_k127_5266454_5 TIGRFAM 4-hydroxyphenylacetate degradation bifunctional isomerase decarboxylase,HpaG2 subunit K05921 - 4.1.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 420.0
BYD3_k127_5266454_6 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 413.0
BYD3_k127_5266454_7 Bacterial SH3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007349 370.0
BYD3_k127_5266454_8 MotA/TolQ/ExbB proton channel family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 352.0
BYD3_k127_5266454_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 284.0
BYD3_k127_5271164_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 2.57e-280 869.0
BYD3_k127_5271164_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 1.94e-239 743.0
BYD3_k127_5271164_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006855 385.0
BYD3_k127_5271164_11 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 346.0
BYD3_k127_5271164_12 Protein of unknown function, DUF484 K09921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 304.0
BYD3_k127_5271164_13 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 287.0
BYD3_k127_5271164_14 helix_turn_helix ASNC type K03719 - - 0.000000000000000000000000000000000000000000000000000000000000002681 221.0
BYD3_k127_5271164_15 - - - - 0.0000000000000000000000000000000000000004021 159.0
BYD3_k127_5271164_2 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 2.047e-194 613.0
BYD3_k127_5271164_3 Winged helix DNA-binding domain K09927 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008014 490.0
BYD3_k127_5271164_4 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 437.0
BYD3_k127_5271164_5 Lipid A biosynthesis acyltransferase K02517,K12974 - 2.3.1.241,2.3.1.242 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009302 429.0
BYD3_k127_5271164_6 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 413.0
BYD3_k127_5271164_7 Protein of unknown function (DUF2167) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 401.0
BYD3_k127_5271164_8 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 405.0
BYD3_k127_5271164_9 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 382.0
BYD3_k127_5275950_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 1.426e-313 964.0
BYD3_k127_5275950_1 Putative diguanylate phosphodiesterase - - - 3.974e-194 634.0
BYD3_k127_5275950_10 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001186 276.0
BYD3_k127_5275950_11 2OG-Fe(II) oxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000004836 235.0
BYD3_k127_5275950_12 Cytochrome c - - - 0.000000000000000000000000000000000000000000000004024 174.0
BYD3_k127_5275950_13 rRNA (guanine-N2-)-methyltransferase activity K09846,K13604,K21460 GO:0003674,GO:0003824,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009987,GO:0015994,GO:0015995,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0030493,GO:0030494,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0036067,GO:0036069,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.210,2.1.1.304,2.1.1.333 0.00000000000000000000000000000000000003148 155.0
BYD3_k127_5275950_14 helix_turn_helix, Lux Regulon K03556 - - 0.00000000000000000000000278 108.0
BYD3_k127_5275950_2 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009118 479.0
BYD3_k127_5275950_3 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 386.0
BYD3_k127_5275950_4 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 334.0
BYD3_k127_5275950_5 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 335.0
BYD3_k127_5275950_6 Transcriptional regulator K07734 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 308.0
BYD3_k127_5275950_7 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 300.0
BYD3_k127_5275950_8 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008904 286.0
BYD3_k127_5275950_9 uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006442 279.0
BYD3_k127_5280618_0 PFAM Extracellular ligand-binding receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 393.0
BYD3_k127_5280618_1 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 378.0
BYD3_k127_5280618_2 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000143 111.0
BYD3_k127_5280618_3 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000001803 85.0
BYD3_k127_5318455_0 Transporter, hydrophobe amphiphile efflux-1 (HAE1) family K18138 - - 0.0 1505.0
BYD3_k127_5318455_1 alcohol dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003193 499.0
BYD3_k127_5318455_10 - - - - 0.000000000000000000000000001407 117.0
BYD3_k127_5318455_11 Fatty acid hydroxylase - - - 0.0000000000000000000002508 97.0
BYD3_k127_5318455_12 - - - - 0.000000000001493 78.0
BYD3_k127_5318455_13 - - - - 0.0000323 54.0
BYD3_k127_5318455_2 Thioredoxin-like K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 431.0
BYD3_k127_5318455_3 Outer membrane efflux protein K18139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 460.0
BYD3_k127_5318455_4 Berberine and berberine like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 413.0
BYD3_k127_5318455_5 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006933 394.0
BYD3_k127_5318455_6 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 391.0
BYD3_k127_5318455_7 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 361.0
BYD3_k127_5318455_8 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000008057 147.0
BYD3_k127_5318455_9 Putative prokaryotic signal transducing protein - - - 0.00000000000000000000000000000000004861 149.0
BYD3_k127_5336315_0 Glutathione S-transferase, C-terminal domain K11209 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 507.0
BYD3_k127_5336315_1 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 440.0
BYD3_k127_5336315_2 Belongs to the GST superfamily K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 333.0
BYD3_k127_5336315_3 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001339 282.0
BYD3_k127_5336315_4 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity K01118 - - 0.00000000000000000000000000000000000000000000000000006879 189.0
BYD3_k127_5336315_5 Saccharopine dehydrogenase NADP binding domain - - - 0.00000000000000000007025 90.0
BYD3_k127_5336315_6 Protein of unknown function (DUF3096) - - - 0.00000000000001833 75.0
BYD3_k127_5375497_0 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 526.0
BYD3_k127_5375497_1 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006631 420.0
BYD3_k127_5375497_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 390.0
BYD3_k127_5375497_3 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 316.0
BYD3_k127_5375497_4 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000002188 264.0
BYD3_k127_5375497_5 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003066 248.0
BYD3_k127_5375497_6 Protein of unknown function (DUF1631) - - - 0.000000000000000000000000000000000000000000000000003333 183.0
BYD3_k127_5399017_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 6.313e-272 841.0
BYD3_k127_5399017_1 COG3170 Tfp pilus assembly protein FimV K08086 - - 1.172e-242 775.0
BYD3_k127_5399017_2 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 2.115e-201 638.0
BYD3_k127_5399017_3 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 613.0
BYD3_k127_5399017_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 417.0
BYD3_k127_5399017_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007622 409.0
BYD3_k127_5405061_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.432e-233 728.0
BYD3_k127_5405061_1 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008315 552.0
BYD3_k127_5405061_2 Enoyl-CoA hydratase/isomerase K20036 - 4.2.1.155 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 425.0
BYD3_k127_5405061_3 - - - - 0.0000000000003062 70.0
BYD3_k127_5406960_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 4.076e-200 632.0
BYD3_k127_5406960_1 AsmA family K07289,K07290 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 571.0
BYD3_k127_5406960_10 Transglycosylase associated protein - - - 0.000000000000000000000000000000001502 130.0
BYD3_k127_5406960_11 BON domain K04065 - - 0.00000000000000000000000000000003256 136.0
BYD3_k127_5406960_12 Cytochrome c - - - 0.00000000000000000000000000000006412 132.0
BYD3_k127_5406960_13 - - - - 0.0000000000000000000000008046 107.0
BYD3_k127_5406960_14 Hemerythrin HHE cation binding domain - - - 0.00000000000000000001013 100.0
BYD3_k127_5406960_15 PAS fold - - - 0.00000000000000004579 88.0
BYD3_k127_5406960_17 - - - - 0.0000001106 62.0
BYD3_k127_5406960_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 418.0
BYD3_k127_5406960_3 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 356.0
BYD3_k127_5406960_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006377 270.0
BYD3_k127_5406960_5 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002788 249.0
BYD3_k127_5406960_6 Protein of unknown function (DUF421) - - - 0.000000000000000000000000000000000000000000000000000000004141 211.0
BYD3_k127_5406960_7 Cysteine-rich secretory protein family - - - 0.00000000000000000000000000000000000000000000001926 181.0
BYD3_k127_5406960_8 Pfam Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000538 177.0
BYD3_k127_5406960_9 Phospholipase D Active site motif K06131 - - 0.00000000000000000000000000000000000002132 159.0
BYD3_k127_5407598_0 GTP-binding protein K06207 - - 0.0 1043.0
BYD3_k127_5407598_1 Di-haem cytochrome c peroxidase K00428 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 481.0
BYD3_k127_5407598_10 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.00000000000000000000000000000000000000000000000000000000001225 210.0
BYD3_k127_5407598_11 Polynucleotide kinase 3 phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000001994 197.0
BYD3_k127_5407598_12 transcriptional regulatory protein Btr K01420 - - 0.00000000000000000000000000000000000000001866 166.0
BYD3_k127_5407598_13 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000001128 101.0
BYD3_k127_5407598_2 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007771 448.0
BYD3_k127_5407598_3 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 456.0
BYD3_k127_5407598_4 Phosphomethylpyrimidine kinase K03272,K21344 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 430.0
BYD3_k127_5407598_5 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 400.0
BYD3_k127_5407598_6 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006344 358.0
BYD3_k127_5407598_7 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005367 338.0
BYD3_k127_5407598_8 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006877 278.0
BYD3_k127_5407598_9 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000001173 246.0
BYD3_k127_5424516_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1154.0
BYD3_k127_5424516_1 ABC transporter substrate-binding protein PnrA-like K02058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 438.0
BYD3_k127_5424516_2 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 323.0
BYD3_k127_5424516_3 Protein conserved in bacteria K09984 - - 0.000000000000000000000000000000003113 142.0
BYD3_k127_5431028_0 Dehydrogenase reductase SDR family member - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009059 404.0
BYD3_k127_5431028_1 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006228 273.0
BYD3_k127_5431028_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000001455 225.0
BYD3_k127_5446438_0 Rieske [2Fe-2S] domain K21323 - 1.14.13.229,1.14.19.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 568.0
BYD3_k127_5446438_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007417 417.0
BYD3_k127_5446438_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000375 283.0
BYD3_k127_5446438_3 PFAM acyl-CoA dehydrogenase domain protein K00252 - 1.3.8.6 0.0000000000000000000758 90.0
BYD3_k127_5464426_0 carboxylase K01968 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.4.1.4 7.28e-316 978.0
BYD3_k127_5464426_1 Carboxyl transferase domain K01969 - 6.4.1.4 1.318e-299 937.0
BYD3_k127_5464426_10 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005838 432.0
BYD3_k127_5464426_11 enoyl-CoA hydratase K13766,K15312 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007994 407.0
BYD3_k127_5464426_12 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 334.0
BYD3_k127_5464426_13 YsiA-like protein, C-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008631 326.0
BYD3_k127_5464426_14 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 312.0
BYD3_k127_5464426_15 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 308.0
BYD3_k127_5464426_16 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 292.0
BYD3_k127_5464426_17 auxin efflux carrier K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003508 287.0
BYD3_k127_5464426_18 2-hydroxychromene-2-carboxylate isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007538 281.0
BYD3_k127_5464426_19 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000002372 244.0
BYD3_k127_5464426_2 Acyl-CoA dehydrogenase, C-terminal domain K00253 - 1.3.8.4 6.23e-217 679.0
BYD3_k127_5464426_20 YbaK prolyl-tRNA synthetase associated - - - 0.00000000000000000000000000000000000000000000000000000000000000003796 240.0
BYD3_k127_5464426_21 PFAM DinB family protein - - - 0.000000000000000000000000000000000000000000000000000000000005662 212.0
BYD3_k127_5464426_22 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000000000001513 212.0
BYD3_k127_5464426_23 glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.00000000000000000000000000000000000000000000000000001015 194.0
BYD3_k127_5464426_24 Membrane K15977 - - 0.000000000000000000000000000000000000000000000002492 186.0
BYD3_k127_5464426_25 YCII-related domain - - - 0.000000000000000000000000000000000000000000005717 168.0
BYD3_k127_5464426_26 - - - - 0.0000000000000000000000022 114.0
BYD3_k127_5464426_27 Protein of unknown function (DUF1289) K06938 - - 0.00000000000000006876 92.0
BYD3_k127_5464426_28 Peptidoglycan-binding domain 1 protein - - - 0.0000000001112 74.0
BYD3_k127_5464426_3 CoA-transferase family III - - - 9.943e-194 629.0
BYD3_k127_5464426_31 tetratricopeptide repeat - - - 0.00008891 54.0
BYD3_k127_5464426_4 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 604.0
BYD3_k127_5464426_5 RNA polymerase sigma factor, sigma-70 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 574.0
BYD3_k127_5464426_6 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006915 524.0
BYD3_k127_5464426_7 PFAM Pyruvate carboxyltransferase K01640 GO:0000287,GO:0003674,GO:0003824,GO:0004419,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006091,GO:0006520,GO:0006551,GO:0006552,GO:0006605,GO:0006625,GO:0006629,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009063,GO:0009081,GO:0009083,GO:0009987,GO:0015031,GO:0015833,GO:0016043,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0017144,GO:0019752,GO:0022607,GO:0030145,GO:0031907,GO:0031974,GO:0033036,GO:0033365,GO:0034613,GO:0042579,GO:0042802,GO:0042803,GO:0042886,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046395,GO:0046872,GO:0046907,GO:0046914,GO:0046950,GO:0046951,GO:0046983,GO:0051179,GO:0051234,GO:0051259,GO:0051262,GO:0051641,GO:0051649,GO:0065003,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072662,GO:0072663,GO:1901564,GO:1901565,GO:1901568,GO:1901570,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1902224 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 503.0
BYD3_k127_5464426_8 Belongs to the alpha-IPM synthase homocitrate synthase family K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 478.0
BYD3_k127_5464426_9 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005088 429.0
BYD3_k127_5475745_0 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 375.0
BYD3_k127_5475745_1 Acyclic terpene utilisation family protein AtuA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006507 367.0
BYD3_k127_5475745_2 diguanylate cyclase - - - 0.0000000000000000000004873 107.0
BYD3_k127_5505073_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.0 1004.0
BYD3_k127_5505073_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 6.672e-200 628.0
BYD3_k127_5505073_10 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000003876 171.0
BYD3_k127_5505073_11 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000000000000000000116 148.0
BYD3_k127_5505073_2 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009371 420.0
BYD3_k127_5505073_3 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008917 414.0
BYD3_k127_5505073_4 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 308.0
BYD3_k127_5505073_5 Methyltransferase domain K02169 - 2.1.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 311.0
BYD3_k127_5505073_6 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001625 249.0
BYD3_k127_5505073_7 PFAM Phosphoribosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000001131 234.0
BYD3_k127_5505073_8 Integral membrane protein (DUF2244) - - - 0.00000000000000000000000000000000000000000000000000000000000026 216.0
BYD3_k127_5505073_9 SpoU rRNA Methylase family K03216 GO:0001510,GO:0002128,GO:0002130,GO:0002131,GO:0002132,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000005863 206.0
BYD3_k127_5514354_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 6.368e-267 829.0
BYD3_k127_5514354_1 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 7.209e-201 634.0
BYD3_k127_5514354_2 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 568.0
BYD3_k127_5514354_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 319.0
BYD3_k127_5514354_4 Colicin V production protein K03558 - - 0.00000000000000000000000000000000000000000000000000001297 205.0
BYD3_k127_5514354_5 Sporulation related domain K03749 - - 0.00000000000000000000000000000000000000000000000000066 195.0
BYD3_k127_5517509_0 PFAM aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 - 1.3.99.16 6.996e-286 902.0
BYD3_k127_5517509_1 Dak1 domain K05878 - 2.7.1.121 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 486.0
BYD3_k127_5517509_2 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000007086 234.0
BYD3_k127_5517509_3 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000001493 196.0
BYD3_k127_5517509_4 integral membrane protein - - - 0.000000000000000000000000000000000000000000004236 172.0
BYD3_k127_5517509_5 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000002613 160.0
BYD3_k127_5517509_6 Dak2 - - - 0.00000000004284 64.0
BYD3_k127_5517509_7 PFAM NmrA family protein - - - 0.00000001716 58.0
BYD3_k127_55180_0 Prolyl oligopeptidase family - - - 8.37e-246 779.0
BYD3_k127_55180_1 ATPase associated with various cellular activities, AAA_5 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 535.0
BYD3_k127_55180_2 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006212 331.0
BYD3_k127_55180_3 Acetyltransferase (GNAT) domain K22479 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003096 323.0
BYD3_k127_55180_4 cytochrome C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001624 258.0
BYD3_k127_55180_5 TIGRFAM Cu(I)-responsive transcriptional regulator K19591 - - 0.00000000000000000000000000000000000000000000000005865 188.0
BYD3_k127_5532106_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 4.726e-262 810.0
BYD3_k127_5532106_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005972 289.0
BYD3_k127_5532106_2 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000000000000000000000000199 235.0
BYD3_k127_5532106_3 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000000000000000000000000000000000000000000008239 216.0
BYD3_k127_5532106_4 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000000000000000000000178 183.0
BYD3_k127_5532106_5 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.00000000000000000000000000215 115.0
BYD3_k127_555567_0 VWA domain containing CoxE-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009128 343.0
BYD3_k127_555567_1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141,K19190 - 1.1.1.328,2.7.7.76 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 291.0
BYD3_k127_555567_2 AAA domain (dynein-related subfamily) - - - 0.000000000000000000002795 94.0
BYD3_k127_5616571_0 Protein conserved in bacteria K13735 - - 4.27e-235 772.0
BYD3_k127_5616571_1 Mannitol dehydrogenase C-terminal domain K00040 - 1.1.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009215 518.0
BYD3_k127_5616571_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009775 409.0
BYD3_k127_5616571_3 PFAM Inner membrane CreD family protein K06143 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002794 379.0
BYD3_k127_5616571_4 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003515 282.0
BYD3_k127_5616571_5 - - - - 0.00000000000000000000000000000000000000000000000000000000004496 211.0
BYD3_k127_5616571_6 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000002596 176.0
BYD3_k127_5616571_7 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000002483 158.0
BYD3_k127_5616571_8 - - - - 0.000000000832 68.0
BYD3_k127_5616571_9 Transcriptional - - - 0.000000003677 65.0
BYD3_k127_5617555_0 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 515.0
BYD3_k127_5617555_1 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007279 378.0
BYD3_k127_5617555_2 Histone family protein nucleoid-structuring protein H-NS K03746 - - 0.0000000000000000000000000000000000009439 141.0
BYD3_k127_5647891_0 oligoendopeptidase F K08602 - - 1.203e-297 923.0
BYD3_k127_5647891_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 426.0
BYD3_k127_5647891_2 ABC transporter transmembrane region - - - 0.000000000000000000000000000000000000000000000001552 180.0
BYD3_k127_5651099_0 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 536.0
BYD3_k127_5651099_1 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006596 388.0
BYD3_k127_5651099_2 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007006 344.0
BYD3_k127_5651099_3 Domain of unknown function (DUF1840) - - - 0.00000000000000000000003038 104.0
BYD3_k127_5651099_4 Transglycosylase associated protein - - - 0.0000000000000000000456 93.0
BYD3_k127_565869_0 Peptidase M61 - - - 5.945e-207 656.0
BYD3_k127_565869_1 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 398.0
BYD3_k127_565869_2 MOSC domain protein beta barrel domain protein K07140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 349.0
BYD3_k127_565869_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 327.0
BYD3_k127_565869_4 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000001403 240.0
BYD3_k127_5668318_0 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 507.0
BYD3_k127_5668318_1 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000412 232.0
BYD3_k127_5668318_2 Belongs to the P(II) protein family K04751,K04752 - - 0.000000000000000000000000000000000000000000000000000000000000008761 217.0
BYD3_k127_5668318_3 magnesium chelatase K07391 - - 0.0000000000002116 70.0
BYD3_k127_5672833_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 2.099e-307 956.0
BYD3_k127_5672833_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 8.091e-293 912.0
BYD3_k127_5672833_10 Transcriptional regulatory protein, C terminal K07663 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 349.0
BYD3_k127_5672833_11 PFAM glycosyl transferase, family 51 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 329.0
BYD3_k127_5672833_12 Transmembrane exosortase (Exosortase_EpsH) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001482 262.0
BYD3_k127_5672833_13 - - - - 0.0000000000000000000000000000000000000000000000000000000002933 207.0
BYD3_k127_5672833_14 membrane - - - 0.000000000000000000000000000000000000000000000000000001945 199.0
BYD3_k127_5672833_2 von Willebrand factor type A domain K07114 - - 4.625e-274 861.0
BYD3_k127_5672833_3 Tripartite ATP-independent periplasmic transporter, DctM component - - - 4.419e-209 655.0
BYD3_k127_5672833_4 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 2.946e-199 634.0
BYD3_k127_5672833_5 His Kinase A (phosphoacceptor) domain K07641 - 2.7.13.3 5.741e-196 621.0
BYD3_k127_5672833_6 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 550.0
BYD3_k127_5672833_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 502.0
BYD3_k127_5672833_8 Response regulator of the LytR AlgR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 415.0
BYD3_k127_5672833_9 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 398.0
BYD3_k127_5678498_0 Biotin carboxylase K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 1.129e-268 829.0
BYD3_k127_5678498_1 Lytic transglycosylase catalytic K08309 - - 2.065e-241 766.0
BYD3_k127_5678498_10 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 334.0
BYD3_k127_5678498_11 5-formyltetrahydrofolate cyclo-ligase K01934 - 6.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203 346.0
BYD3_k127_5678498_12 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 317.0
BYD3_k127_5678498_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003136 282.0
BYD3_k127_5678498_14 short-chain K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000038 285.0
BYD3_k127_5678498_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000002733 237.0
BYD3_k127_5678498_16 Domain of unknown function (DUF4136) - - - 0.0000000000000000000000000000000000000000000000000000000000000000007216 233.0
BYD3_k127_5678498_17 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000000000003001 206.0
BYD3_k127_5678498_18 TIGRFAM MJ0042 family finger-like - - - 0.00000000000000000000000000000000000000000000000000000002043 216.0
BYD3_k127_5678498_19 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000004335 193.0
BYD3_k127_5678498_2 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 488.0
BYD3_k127_5678498_20 - - - - 0.00000000000000000000000000000000000003866 147.0
BYD3_k127_5678498_21 TfoX N-terminal domain K07343 - - 0.00000000000000000000000000000001222 140.0
BYD3_k127_5678498_22 RNB K01147 - 3.1.13.1 0.00000000000000000008232 91.0
BYD3_k127_5678498_23 Dihydroneopterin aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000004743 100.0
BYD3_k127_5678498_24 Protein of unknown function (DUF2905) - - - 0.0000000000000003726 79.0
BYD3_k127_5678498_25 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000002645 63.0
BYD3_k127_5678498_3 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 494.0
BYD3_k127_5678498_4 pfkB family carbohydrate kinase K00852,K00856 - 2.7.1.15,2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008187 471.0
BYD3_k127_5678498_5 TonB C terminal K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 437.0
BYD3_k127_5678498_6 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009466 408.0
BYD3_k127_5678498_7 LysR family K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 391.0
BYD3_k127_5678498_8 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 368.0
BYD3_k127_5678498_9 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006443 356.0
BYD3_k127_5679417_0 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 1.763e-285 887.0
BYD3_k127_5679417_1 PFAM AMP-dependent synthetase and ligase K08295 - 6.2.1.32 8.221e-232 739.0
BYD3_k127_5679417_2 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 2.692e-194 625.0
BYD3_k127_5679417_3 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007625 552.0
BYD3_k127_5679417_4 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation K07130 GO:0003674,GO:0003824,GO:0004061,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043167,GO:0043169,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006977 336.0
BYD3_k127_5679417_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 315.0
BYD3_k127_5679417_6 ROK family K00845,K00847,K00884 - 2.7.1.2,2.7.1.4,2.7.1.59 0.000000000000000000000000000000000000000000000005403 177.0
BYD3_k127_5679417_7 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K00797,K01611 - 2.5.1.16,4.1.1.50 0.000000000000000000000000000000000002812 141.0
BYD3_k127_5709853_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 1.819e-221 697.0
BYD3_k127_5709853_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 458.0
BYD3_k127_5709853_2 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 383.0
BYD3_k127_5709853_3 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000000000000000000001087 155.0
BYD3_k127_5709853_4 Protein of unknown function (DUF3579) - - - 0.000000000000000000000000000000000000104 147.0
BYD3_k127_5742008_0 FAD dependent oxidoreductase K13796 - - 9.815e-256 794.0
BYD3_k127_5742008_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000862 574.0
BYD3_k127_5742008_2 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 449.0
BYD3_k127_5742008_3 CitB domain protein K13795 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 318.0
BYD3_k127_5742008_4 [2Fe-2S] binding domain K18029 - 1.17.2.1 0.00000000000000000000000000000000000000000000000000009794 196.0
BYD3_k127_5747635_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005864 529.0
BYD3_k127_5747635_1 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 431.0
BYD3_k127_5750544_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 1.573e-253 786.0
BYD3_k127_5750544_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 477.0
BYD3_k127_5750544_2 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 430.0
BYD3_k127_5750544_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 381.0
BYD3_k127_5750544_4 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000004193 248.0
BYD3_k127_5750544_5 Isocitrate lyase K01637 - 4.1.3.1 0.000000000000000000000000000007971 119.0
BYD3_k127_575779_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.818e-258 803.0
BYD3_k127_575779_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835,K01840,K15778 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.2,5.4.2.8 2.349e-243 759.0
BYD3_k127_575779_2 AlkA N-terminal domain K13529 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 608.0
BYD3_k127_575779_3 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008554 543.0
BYD3_k127_575779_4 Cys/Met metabolism PLP-dependent enzyme K01760 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 537.0
BYD3_k127_575779_5 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 356.0
BYD3_k127_575779_6 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 347.0
BYD3_k127_575779_7 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001472 289.0
BYD3_k127_575779_8 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000000464 186.0
BYD3_k127_5771022_0 PFAM AMP-dependent synthetase and ligase K00666 - - 1.279e-310 957.0
BYD3_k127_5771022_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.223e-305 943.0
BYD3_k127_5771022_10 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000000000000000002089 115.0
BYD3_k127_5771022_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.18e-268 831.0
BYD3_k127_5771022_3 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 515.0
BYD3_k127_5771022_4 Sugar (and other) transporter K08151 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 505.0
BYD3_k127_5771022_5 enoyl-CoA hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 373.0
BYD3_k127_5771022_6 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002698 269.0
BYD3_k127_5771022_7 cyclase dehydrase - - - 0.0000000000000000000000000000000000000000000000000000000000000000007716 231.0
BYD3_k127_5771022_8 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000007915 141.0
BYD3_k127_5771022_9 Domain of unknown function (DUF4124) - - - 0.00000000000000000000000000000000001029 156.0
BYD3_k127_5771485_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 1.259e-210 673.0
BYD3_k127_5771485_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 569.0
BYD3_k127_5771485_2 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 524.0
BYD3_k127_5771485_3 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009144 481.0
BYD3_k127_5771485_4 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007965 477.0
BYD3_k127_5771485_5 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001591 271.0
BYD3_k127_5771485_6 PepSY-associated TM region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002452 247.0
BYD3_k127_5771485_7 MarR family - - - 0.000000000000000002267 91.0
BYD3_k127_5771485_8 - - - - 0.000000000000002088 88.0
BYD3_k127_5803737_0 Acetyl-coenzyme A transporter 1 K08218 - - 3.302e-231 726.0
BYD3_k127_5803737_1 Peptidase M48 Ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 408.0
BYD3_k127_5803737_2 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 289.0
BYD3_k127_5803737_3 transmembrane transcriptional regulator (anti-sigma factor) - - - 0.0000003243 53.0
BYD3_k127_581081_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 2.5e-323 1006.0
BYD3_k127_581081_1 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 1.756e-310 957.0
BYD3_k127_581081_10 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 359.0
BYD3_k127_581081_11 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006583 350.0
BYD3_k127_581081_12 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 345.0
BYD3_k127_581081_13 Protein of unknown function (DUF3445) K22342 - 1.14.13.238 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 331.0
BYD3_k127_581081_14 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000993 318.0
BYD3_k127_581081_15 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 307.0
BYD3_k127_581081_16 Belongs to the UPF0502 family K09915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000982 257.0
BYD3_k127_581081_17 Thioesterase superfamily protein K07107 - - 0.0000000000000000000000000000000000000000000000000000004606 195.0
BYD3_k127_581081_18 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000000000000003892 167.0
BYD3_k127_581081_19 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000000000008278 150.0
BYD3_k127_581081_2 Gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 2.285e-234 740.0
BYD3_k127_581081_20 PFAM thioesterase superfamily protein - - - 0.0000000000000000000000000000000000000009081 152.0
BYD3_k127_581081_21 PFAM regulatory protein TetR K22294 - - 0.0005692 43.0
BYD3_k127_581081_3 peptidylprolyl isomerase K03770 - 5.2.1.8 1.871e-219 699.0
BYD3_k127_581081_4 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 557.0
BYD3_k127_581081_5 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 535.0
BYD3_k127_581081_6 TIGRFAM 3-oxoacid CoA-transferase, A subunit K01028 - 2.8.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007156 418.0
BYD3_k127_581081_7 short-chain dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004463 441.0
BYD3_k127_581081_8 Uncharacterized protein conserved in bacteria (DUF2331) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008831 399.0
BYD3_k127_581081_9 3-oxoacid CoA-transferase, B subunit K01029 - 2.8.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 381.0
BYD3_k127_58652_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006603 595.0
BYD3_k127_58652_1 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 439.0
BYD3_k127_5870070_0 Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system K10441 - 3.6.3.17 1.492e-240 756.0
BYD3_k127_5870070_1 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 1.524e-223 707.0
BYD3_k127_5870070_10 Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 503.0
BYD3_k127_5870070_11 Binding-protein-dependent transport system inner membrane component K02026,K10229 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008603 485.0
BYD3_k127_5870070_12 ABC-type sugar transport system periplasmic component K10439 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 471.0
BYD3_k127_5870070_13 Belongs to the binding-protein-dependent transport system permease family K10440 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 451.0
BYD3_k127_5870070_14 Belongs to the binding-protein-dependent transport system permease family K02057,K10440 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 440.0
BYD3_k127_5870070_15 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 439.0
BYD3_k127_5870070_16 ABC-type sugar transport systems permease components K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003662 428.0
BYD3_k127_5870070_17 TOBE domain K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002727 428.0
BYD3_k127_5870070_18 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 400.0
BYD3_k127_5870070_19 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007604 391.0
BYD3_k127_5870070_2 belongs to the aldehyde dehydrogenase family K00146 - 1.2.1.39 1.959e-211 676.0
BYD3_k127_5870070_20 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 404.0
BYD3_k127_5870070_21 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00004,K07538 - 1.1.1.303,1.1.1.368,1.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 417.0
BYD3_k127_5870070_22 Xylose isomerase-like TIM barrel K18910 GO:0003674,GO:0003824,GO:0005488,GO:0016853,GO:0016854,GO:0016857,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0050897 5.1.3.30,5.1.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000906 386.0
BYD3_k127_5870070_23 Belongs to the ABC transporter superfamily K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 390.0
BYD3_k127_5870070_24 Belongs to the binding-protein-dependent transport system permease family K02057,K10440 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 380.0
BYD3_k127_5870070_25 regulatory protein GntR HTH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 346.0
BYD3_k127_5870070_26 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 346.0
BYD3_k127_5870070_27 Cupin 2, conserved barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 331.0
BYD3_k127_5870070_28 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006462 304.0
BYD3_k127_5870070_29 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009707 295.0
BYD3_k127_5870070_3 AP endonuclease 2 domain protein - - - 2.831e-210 658.0
BYD3_k127_5870070_30 TIGRFAM intracellular protease, PfpI family K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004029 271.0
BYD3_k127_5870070_31 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003918 273.0
BYD3_k127_5870070_32 FCD K05799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001085 269.0
BYD3_k127_5870070_33 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007999 271.0
BYD3_k127_5870070_34 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001498 271.0
BYD3_k127_5870070_35 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000104 254.0
BYD3_k127_5870070_36 AraC-binding-like domain - - - 0.000000000000000000000000000000000000000000000000000000000002059 221.0
BYD3_k127_5870070_37 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000008502 161.0
BYD3_k127_5870070_38 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.00000000000000000000000000000000005648 145.0
BYD3_k127_5870070_39 monooxygenase activity - - - 0.000000000000000000000000000000002216 134.0
BYD3_k127_5870070_4 Extracellular solute-binding protein K02027 - - 3.161e-209 659.0
BYD3_k127_5870070_40 amidohydrolase - - - 0.0000000000000000000001918 98.0
BYD3_k127_5870070_41 LysR family transcriptional regulator - - - 0.000000000000000001408 87.0
BYD3_k127_5870070_5 ABC transporter K10439 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005584 604.0
BYD3_k127_5870070_6 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007646 578.0
BYD3_k127_5870070_7 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K20023 - 4.2.1.156,4.2.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 546.0
BYD3_k127_5870070_8 Gluconolactonase K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 512.0
BYD3_k127_5870070_9 Periplasmic binding protein K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004856 508.0
BYD3_k127_587924_0 PFAM surface antigen (D15) K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 535.0
BYD3_k127_587924_1 pfkB family carbohydrate kinase K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000384 246.0
BYD3_k127_587924_2 protein conserved in bacteria K09800 - - 0.00000000000000000000000006396 125.0
BYD3_k127_587924_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000003158 55.0
BYD3_k127_5895512_0 Thioredoxin-like - - - 7.575e-196 644.0
BYD3_k127_5895512_1 Membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 393.0
BYD3_k127_5895512_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009967 254.0
BYD3_k127_5895512_3 - - - - 0.000000000000001054 81.0
BYD3_k127_590154_0 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 4.129e-194 625.0
BYD3_k127_590154_2 - - - - 0.0000002489 58.0
BYD3_k127_5910336_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.438e-304 938.0
BYD3_k127_5910336_1 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 365.0
BYD3_k127_5910336_2 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 344.0
BYD3_k127_5910336_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 323.0
BYD3_k127_5910336_4 Protein of unknown function (DUF1631) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008627 264.0
BYD3_k127_5910336_5 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000002579 194.0
BYD3_k127_5910336_6 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000000000000002237 186.0
BYD3_k127_5910336_7 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000002265 167.0
BYD3_k127_5910336_8 tryptophan synthase subunit beta - - - 0.00000000000000000000000000000000002677 138.0
BYD3_k127_5910336_9 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000004667 81.0
BYD3_k127_5911639_0 Peptidase C39 family K13409 - - 3.502e-289 907.0
BYD3_k127_5911639_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 299.0
BYD3_k127_5911639_2 HlyD family secretion protein K13408 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002079 264.0
BYD3_k127_5920032_0 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 374.0
BYD3_k127_5920032_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00646,K00647,K09458 - 2.3.1.179,2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 280.0
BYD3_k127_5920032_2 OmpW family K07275 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002422 266.0
BYD3_k127_5920032_3 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000004629 201.0
BYD3_k127_5927024_0 Phosphoribosyltransferase K00768 - 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 524.0
BYD3_k127_5927024_1 PFAM General secretion pathway protein K K02460 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 326.0
BYD3_k127_5927024_2 Prokaryotic N-terminal methylation motif K02459 - - 0.00000000000000000000000000000000000000000000000000000000000000000001182 241.0
BYD3_k127_5927024_3 general secretion pathway protein K02456 - - 0.000000000000000000000000000000000000000000000000000000000000000000153 237.0
BYD3_k127_5927024_4 general secretion pathway protein K02458 - - 0.00000000000000000000000000000000000000003091 163.0
BYD3_k127_5927024_5 general secretion pathway protein H K02457 - - 0.0000000000000000000000000000000000004458 146.0
BYD3_k127_5927024_6 General secretion pathway K02461 - - 0.000000000000000000000000000005094 122.0
BYD3_k127_5927024_7 general secretion pathway protein K02452 - - 0.0000000000000000000000000002732 129.0
BYD3_k127_5940632_0 Bacterial protein of unknown function (DUF853) K06915 - - 2.113e-265 841.0
BYD3_k127_5940632_1 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000794 535.0
BYD3_k127_5940632_2 Peptidase M14, carboxypeptidase A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006749 527.0
BYD3_k127_5940632_3 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 411.0
BYD3_k127_5940632_4 Protein of unknown function (DUF1499) - - - 0.0000000000000000000000000000000000000000000000000002359 201.0
BYD3_k127_5940632_5 - - - - 0.000000000000000000000000000001275 125.0
BYD3_k127_5966944_0 ABC transporter transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 449.0
BYD3_k127_5966944_1 Belongs to the amidase family K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 423.0
BYD3_k127_5966944_2 UDP-glucoronosyl and UDP-glucosyl transferase - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008194,GO:0008610,GO:0009058,GO:0009247,GO:0009405,GO:0009605,GO:0009607,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0020012,GO:0030682,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044464,GO:0046467,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071704,GO:0071944,GO:0075136,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 305.0
BYD3_k127_5966944_3 - - - - 0.000000000000000006061 88.0
BYD3_k127_5966944_4 helix_turn_helix multiple antibiotic resistance protein - - - 0.000001185 57.0
BYD3_k127_598246_0 AMP-binding enzyme C-terminal domain K00666 - - 5.539e-290 899.0
BYD3_k127_598246_1 Prolyl oligopeptidase K01322 - 3.4.21.26 5.992e-199 627.0
BYD3_k127_598246_2 Protein kinase domain K08282 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006574 432.0
BYD3_k127_598246_3 Bacterial protein of unknown function (DUF924) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001937 238.0
BYD3_k127_598246_4 GCN5-related N-acetyl-transferase K06975 - - 0.0000000000000000000000000000006098 124.0
BYD3_k127_5984901_0 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 554.0
BYD3_k127_5984901_1 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 383.0
BYD3_k127_5984901_2 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.000000000000000000000000000000000000007996 165.0
BYD3_k127_5984901_3 - - - - 0.0000000000000000000000000000000164 130.0
BYD3_k127_5984901_4 cheY-homologous receiver domain K11443 - - 0.0000000000000000000000000005205 117.0
BYD3_k127_5993280_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0 1008.0
BYD3_k127_5993280_1 Aromatic amino acid lyase K01745 - 4.3.1.3 2.042e-213 674.0
BYD3_k127_5993280_2 Amidohydrolase family K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 560.0
BYD3_k127_5993280_3 Amidohydrolase family K05603 - 3.5.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000747 561.0
BYD3_k127_5993280_4 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 460.0
BYD3_k127_5993280_5 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 415.0
BYD3_k127_5993280_6 N-formylglutamate amidohydrolase K01458,K01479 - 3.5.1.68,3.5.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 364.0
BYD3_k127_5993280_7 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000003801 153.0
BYD3_k127_5993280_8 HutD K09975 - - 0.00000000000000000000000008308 125.0
BYD3_k127_5993280_9 diguanylate cyclase - - - 0.000001431 57.0
BYD3_k127_5993463_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 6.215e-284 881.0
BYD3_k127_5993463_1 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 544.0
BYD3_k127_5993463_2 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008585 549.0
BYD3_k127_5993463_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 389.0
BYD3_k127_5993463_4 Nudix N-terminal K03426 - 3.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 287.0
BYD3_k127_5993463_5 Eukaryotic integral membrane protein (DUF1751) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008215 302.0
BYD3_k127_5993463_6 Belongs to the sulfur carrier protein TusA family K04085 - - 0.000000000000000000000000000000004074 128.0
BYD3_k127_5997649_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1039.0
BYD3_k127_5997649_1 PFAM acyl-CoA dehydrogenase domain protein K20035 - - 4.261e-313 966.0
BYD3_k127_5997649_10 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 394.0
BYD3_k127_5997649_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 2.54e-254 787.0
BYD3_k127_5997649_3 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000935 606.0
BYD3_k127_5997649_4 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 531.0
BYD3_k127_5997649_5 Electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 509.0
BYD3_k127_5997649_6 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 489.0
BYD3_k127_5997649_7 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 461.0
BYD3_k127_5997649_8 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 428.0
BYD3_k127_5997649_9 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 421.0
BYD3_k127_6057280_0 Protein of unknown function (DUF1214) - - - 2.269e-195 620.0
BYD3_k127_6057280_1 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 597.0
BYD3_k127_6057280_10 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000007449 123.0
BYD3_k127_6057280_11 - - - - 0.0000000000000000000000005288 111.0
BYD3_k127_6057280_12 Domain of unknown function (DUF1127) - - - 0.00000006968 57.0
BYD3_k127_6057280_2 PFAM Phospholipase D Transphosphatidylase K06132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 434.0
BYD3_k127_6057280_3 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003534 382.0
BYD3_k127_6057280_4 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006452 362.0
BYD3_k127_6057280_5 Cupin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 321.0
BYD3_k127_6057280_6 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 311.0
BYD3_k127_6057280_7 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 321.0
BYD3_k127_6057280_8 PFAM Restriction endonuclease K07448 - - 0.000000000000000000000000000000000000000000000000000000000000001601 229.0
BYD3_k127_6057280_9 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000378 178.0
BYD3_k127_6092356_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1114.0
BYD3_k127_6092356_1 AMP-binding enzyme C-terminal domain K00666 - - 9.201e-268 832.0
BYD3_k127_6092356_2 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 1.159e-203 636.0
BYD3_k127_6092356_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 286.0
BYD3_k127_6092356_4 PFAM Lytic transglycosylase catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000000002743 235.0
BYD3_k127_6123278_0 acyl-CoA dehydrogenase - - - 7.908e-200 630.0
BYD3_k127_6123278_1 Amidase K21801 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 459.0
BYD3_k127_6123278_2 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006141 369.0
BYD3_k127_6134730_0 PFAM Patatin K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 460.0
BYD3_k127_6134730_1 Sulphur transport K07112,K19168 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 292.0
BYD3_k127_6134730_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000007717 258.0
BYD3_k127_6134730_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00019 - 1.1.1.30 0.00001094 48.0
BYD3_k127_6143132_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1212.0
BYD3_k127_6143132_1 Transcriptional regulator MerR family - - - 0.000000000000000000000000000000000000000000000001073 178.0
BYD3_k127_6143132_2 SnoaL-like domain K06893 - - 0.0000000000000000000000000000000004064 136.0
BYD3_k127_6143132_3 Lysyl oxidase - - - 0.000000000000000000007804 105.0
BYD3_k127_6143132_5 helix_turn_helix, Lux Regulon K03556 - - 0.00000000007479 70.0
BYD3_k127_6155704_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 516.0
BYD3_k127_6155704_1 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 506.0
BYD3_k127_6155704_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 418.0
BYD3_k127_6155704_3 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 418.0
BYD3_k127_6155704_4 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004407 274.0
BYD3_k127_6155704_5 - - - - 0.00000000000000000000000000000000000000000000000000000001808 207.0
BYD3_k127_6155704_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.000000000000000000000000000002707 123.0
BYD3_k127_6155704_7 - - - - 0.00000000000000000000000001301 119.0
BYD3_k127_6155704_8 - - - - 0.0000006176 57.0
BYD3_k127_6155704_9 dienelactone hydrolase - - - 0.00009995 51.0
BYD3_k127_6166087_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 3.241e-229 716.0
BYD3_k127_6166087_1 NMT1-like family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002105 241.0
BYD3_k127_6166087_2 Helix-turn-helix domain, rpiR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002186 248.0
BYD3_k127_6166087_3 coa-binding K06929 - - 0.00000000000000000000000000000000000000000000000000009066 190.0
BYD3_k127_6166087_4 CoA-binding protein K06929 - - 0.000003172 49.0
BYD3_k127_6238246_0 Protein of unknown function (DUF1302) - - - 6.699e-198 634.0
BYD3_k127_6238246_1 PFAM AMP-dependent synthetase and ligase K12508 - 6.2.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 577.0
BYD3_k127_6238246_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 411.0
BYD3_k127_6238246_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 382.0
BYD3_k127_6238246_4 Protein of unknown function (DUF1329) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008768 348.0
BYD3_k127_6238246_5 Enoyl-CoA hydratase/isomerase K20036 - 4.2.1.155 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 318.0
BYD3_k127_6238246_6 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000992 249.0
BYD3_k127_6238246_7 COG1846 Transcriptional regulators - - - 0.00000000000000000000000000000006544 130.0
BYD3_k127_6249704_0 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 372.0
BYD3_k127_6249704_1 TAP-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004299 269.0
BYD3_k127_6249704_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007263 264.0
BYD3_k127_6249704_3 phosphorelay signal transduction system - - - 0.00000000000000000004371 95.0
BYD3_k127_626348_0 Amidohydrolase family K00200 - 1.2.7.12 9.869e-299 936.0
BYD3_k127_626348_1 dihydropteroate synthase - - - 1.446e-200 630.0
BYD3_k127_626348_2 formylmethanofuran dehydrogenase K00201 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006745 471.0
BYD3_k127_626348_3 Hydantoinase/oxoprolinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 454.0
BYD3_k127_626348_4 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009667 299.0
BYD3_k127_626348_5 aspartate glutamate uridylate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001515 278.0
BYD3_k127_626348_6 Protein of unknown function (DUF447) K09154 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001258 275.0
BYD3_k127_626348_7 Pfam:DUF556 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001056 252.0
BYD3_k127_6276607_0 ROK family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 543.0
BYD3_k127_6276607_1 PFAM ABC transporter related K10554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 437.0
BYD3_k127_6276607_2 Cobalt uptake substrate-specific transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000006723 237.0
BYD3_k127_6302079_0 dehydrogenase, E1 component K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 431.0
BYD3_k127_6302079_1 L-asparaginase II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 416.0
BYD3_k127_6302079_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008214 287.0
BYD3_k127_6302079_3 Transketolase, pyrimidine binding domain K00162,K21417 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000002572 237.0
BYD3_k127_6302079_4 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000009421 181.0
BYD3_k127_6333289_0 Activator of aromatic catabolism - - - 7.953e-210 683.0
BYD3_k127_6333289_1 belongs to the aldehyde dehydrogenase family K00141 - 1.2.1.28 1.818e-204 649.0
BYD3_k127_6333289_2 Periplasmic binding protein K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007388 524.0
BYD3_k127_6333289_3 SMART ATPase, AAA type, core K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001588 270.0
BYD3_k127_6333289_4 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002817 254.0
BYD3_k127_6333289_5 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000003118 83.0
BYD3_k127_6342901_0 ATPases associated with a variety of cellular activities K03701 - - 8.252e-310 970.0
BYD3_k127_6342901_1 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 541.0
BYD3_k127_6342901_2 Virulence factor membrane-bound polymerase, C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 317.0
BYD3_k127_6342901_3 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000005366 234.0
BYD3_k127_6342901_4 SWI complex, BAF60b domains - - - 0.00000000000000000000000000000000000000000000000002785 185.0
BYD3_k127_6342901_5 PFAM Membrane protein of K08972 - - 0.0000000000000000000000000000000000000000000005939 171.0
BYD3_k127_6357738_0 Belongs to the DEAD box helicase family K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 1.214e-226 710.0
BYD3_k127_6357738_1 Glycosyl transferase, family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 490.0
BYD3_k127_6357738_2 Uroporphyrin-iii c tetrapyrrole (Corrin porphyrin) methyltransferase K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000008951 267.0
BYD3_k127_6357738_3 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001843 259.0
BYD3_k127_6357738_4 VanZ like family - - - 0.000000000000009505 83.0
BYD3_k127_638716_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1096.0
BYD3_k127_638716_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 317.0
BYD3_k127_638716_10 Biotin-requiring enzyme - - - 0.0000000001858 67.0
BYD3_k127_638716_11 PFAM peptidase S1 and S6, chymotrypsin Hap - - - 0.0005002 48.0
BYD3_k127_638716_2 Helix-hairpin-helix domain K04477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006728 290.0
BYD3_k127_638716_3 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000001651 184.0
BYD3_k127_638716_4 Belongs to the CDS family - - - 0.00000000000000000000000000000000000000000000001077 176.0
BYD3_k127_638716_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.00000000000000000000000000000001154 134.0
BYD3_k127_638716_6 'Cold-shock' DNA-binding domain - - - 0.00000000000000000000000000000008691 128.0
BYD3_k127_638716_7 - - - - 0.0000000000000000000000000003156 121.0
BYD3_k127_638716_8 - - - - 0.00000000000000000000004906 102.0
BYD3_k127_638716_9 Protein required for attachment to host cells - - - 0.00000000000000000005493 93.0
BYD3_k127_639127_0 Aminotransferase K14267 - 2.6.1.17 3.274e-206 648.0
BYD3_k127_639127_1 twitching motility protein K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 604.0
BYD3_k127_639127_2 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 585.0
BYD3_k127_639127_3 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007648 459.0
BYD3_k127_639127_4 Belongs to the protein N5-glutamine methyltransferase family K07320 - 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006248 383.0
BYD3_k127_639127_5 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772,K03815 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 379.0
BYD3_k127_639127_6 ABC transporter K06158 - - 0.000000000000000000000000000007752 120.0
BYD3_k127_6405782_0 2-dehydropantoate 2-reductase K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007071 422.0
BYD3_k127_6405782_1 Transcriptional regulator, LysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 402.0
BYD3_k127_6405782_10 Protein of unknown function (DUF3149) - - - 0.000000000001478 69.0
BYD3_k127_6405782_2 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 313.0
BYD3_k127_6405782_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 305.0
BYD3_k127_6405782_4 Belongs to the GST superfamily K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008477 286.0
BYD3_k127_6405782_5 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000211 251.0
BYD3_k127_6405782_6 protein domain associated with - - - 0.000000000000000000000000000000000000000000000000000000000000000001816 230.0
BYD3_k127_6405782_7 membrane - - - 0.0000000000000000000000000000000000000000000000005925 183.0
BYD3_k127_6405782_8 Protein of unknown function, DUF255 - - - 0.000000000000000000000000000000000000001768 152.0
BYD3_k127_6405782_9 Putative lumazine-binding - - - 0.000000000000000000000000000000000000002552 162.0
BYD3_k127_6469280_0 Belongs to the xylose isomerase family K01805 - 5.3.1.5 2.455e-226 723.0
BYD3_k127_6469280_1 ABC transporter K10441 - 3.6.3.17 6.744e-216 681.0
BYD3_k127_6469280_10 Sugar ABC transporter ATP-binding protein K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 376.0
BYD3_k127_6469280_11 Branched-chain amino acid transport system / permease component K10440 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 352.0
BYD3_k127_6469280_2 FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 4.79e-207 655.0
BYD3_k127_6469280_3 Bacterial regulatory proteins, lacI family K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 535.0
BYD3_k127_6469280_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 518.0
BYD3_k127_6469280_5 Periplasmic binding protein domain K10439 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 505.0
BYD3_k127_6469280_6 sugar ABC transporter substrate-binding protein K10439 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 463.0
BYD3_k127_6469280_7 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 442.0
BYD3_k127_6469280_8 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 420.0
BYD3_k127_6469280_9 Belongs to the binding-protein-dependent transport system permease family K10440 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008535 412.0
BYD3_k127_65006_0 PFAM amidohydrolase K01464,K01466 - 3.5.2.2,3.5.2.5 1.393e-277 860.0
BYD3_k127_65006_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 606.0
BYD3_k127_65006_10 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 328.0
BYD3_k127_65006_11 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 298.0
BYD3_k127_65006_12 B3/4 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000011 267.0
BYD3_k127_65006_13 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002372 232.0
BYD3_k127_65006_14 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003565 235.0
BYD3_k127_65006_15 Belongs to the LeuD family K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000004263 226.0
BYD3_k127_65006_17 plastoquinol--plastocyanin reductase activity - - - 0.00000000000000000000000000000000000000000000000003507 187.0
BYD3_k127_65006_18 - - - - 0.000000000000000000000000000000006777 136.0
BYD3_k127_65006_19 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000001759 87.0
BYD3_k127_65006_2 Homoaconitate hydratase family protein K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 600.0
BYD3_k127_65006_3 fumarate reductase succinate dehydrogenase flavoprotein domain protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008785 587.0
BYD3_k127_65006_4 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 570.0
BYD3_k127_65006_5 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 492.0
BYD3_k127_65006_6 Isocitrate lyase and phosphorylmutase K01841 - 5.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005484 454.0
BYD3_k127_65006_7 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 427.0
BYD3_k127_65006_8 PFAM ABC transporter related K01995,K10822 - 3.6.3.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003565 376.0
BYD3_k127_65006_9 PFAM ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 344.0
BYD3_k127_6507374_0 fumarate reductase succinate dehydrogenase flavoprotein domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 597.0
BYD3_k127_6507374_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 522.0
BYD3_k127_6507374_10 Type II secretion system protein B K02451 - - 0.000000000000000000000000000002997 133.0
BYD3_k127_6507374_11 Belongs to the UPF0337 (CsbD) family - - - 0.0000000000000000000000000001278 116.0
BYD3_k127_6507374_12 Involved in sulfation activity towards typical ceramide glycolipids and trehalose glycolipids K01014 - 2.8.2.1 0.000000000000000000000000009742 121.0
BYD3_k127_6507374_13 Short-chain dehydrogenase reductase sdr K00059 - 1.1.1.100 0.0000000000000000002331 89.0
BYD3_k127_6507374_15 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0009868 47.0
BYD3_k127_6507374_2 Type II secretory pathway, component ExeA K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 411.0
BYD3_k127_6507374_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009156 400.0
BYD3_k127_6507374_4 PFAM Extracellular ligand-binding receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 382.0
BYD3_k127_6507374_5 helix-turn-helix- domain containing protein, AraC type K13652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 338.0
BYD3_k127_6507374_6 Adenylylsulphate kinase K00955 - 2.7.1.25,2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000687 270.0
BYD3_k127_6507374_7 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002192 268.0
BYD3_k127_6507374_8 PFAM acyltransferase 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000008773 239.0
BYD3_k127_6507374_9 Protein of unknown function (DUF1304) K08987 - - 0.000000000000000000000000000000000000000000000003584 175.0
BYD3_k127_6509412_0 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003543 527.0
BYD3_k127_6509412_1 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006351 340.0
BYD3_k127_6509412_2 PFAM UspA domain protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000074 251.0
BYD3_k127_6509412_3 Cytochrome c, class I - - - 0.0000000000000000000185 93.0
BYD3_k127_651955_0 transmembrane transporter activity K18138 - - 0.0 1114.0
BYD3_k127_651955_1 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 385.0
BYD3_k127_651955_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000002756 199.0
BYD3_k127_6522715_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.0 1026.0
BYD3_k127_6522715_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 1.398e-250 781.0
BYD3_k127_6522715_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000006322 246.0
BYD3_k127_6522715_11 PFAM response regulator receiver K02483,K07666,K07774 - - 0.00000000000000000000000000000000000000000005226 160.0
BYD3_k127_6522715_12 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000001458 158.0
BYD3_k127_6522715_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 4.323e-242 756.0
BYD3_k127_6522715_3 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 1.938e-216 674.0
BYD3_k127_6522715_4 two-component sensor kinase K07649 - 2.7.13.3 2.417e-212 669.0
BYD3_k127_6522715_5 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 3.164e-202 635.0
BYD3_k127_6522715_6 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000524 395.0
BYD3_k127_6522715_7 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 331.0
BYD3_k127_6522715_8 Rod shape-determining protein mreD K03571 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007506 269.0
BYD3_k127_6522715_9 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020,K08319 - 1.1.1.31,1.1.1.411 0.000000000000000000000000000000000000000000000000000000000000000000000000000001456 288.0
BYD3_k127_6546500_0 type VI secretion protein K11891 - - 1.634e-236 777.0
BYD3_k127_6546500_1 Forkhead-associated protein - - - 4.816e-224 723.0
BYD3_k127_6546500_10 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000002786 231.0
BYD3_k127_6546500_11 Forkhead associated domain K07169,K11913 - - 0.000000000000000000000000000000000000000000000000000002707 205.0
BYD3_k127_6546500_12 - - - - 0.00000000000000000000000000000000000000000005087 172.0
BYD3_k127_6546500_13 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000154 155.0
BYD3_k127_6546500_14 Uncharacterized protein conserved in bacteria (DUF2094) K11890 - - 0.00000000000000000000000000000000000008859 150.0
BYD3_k127_6546500_15 - - - - 0.000000000000000000001298 107.0
BYD3_k127_6546500_2 PFAM secretion protein HlyD family protein K02022 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 612.0
BYD3_k127_6546500_3 Peptidase C39 family K06147,K11004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000507 596.0
BYD3_k127_6546500_4 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006365 574.0
BYD3_k127_6546500_5 Protein of unknown function (DUF3365) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 362.0
BYD3_k127_6546500_6 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 352.0
BYD3_k127_6546500_7 peptidylprolyl isomerase K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 338.0
BYD3_k127_6546500_8 TIGRFAM type IV VI secretion system protein, DotU family K11892 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001455 295.0
BYD3_k127_6546500_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006607 249.0
BYD3_k127_656540_0 Belongs to the IlvD Edd family K01687,K13875,K22186 - 4.2.1.25,4.2.1.82,4.2.1.9 0.0 1029.0
BYD3_k127_656540_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005903 458.0
BYD3_k127_656540_2 Aldolase/RraA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 413.0
BYD3_k127_656540_3 Belongs to the LDH2 MDH2 oxidoreductase family K00016 - 1.1.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003102 409.0
BYD3_k127_656540_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 314.0
BYD3_k127_656540_5 Regulatory protein GntR HTH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002037 265.0
BYD3_k127_656540_6 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000329 236.0
BYD3_k127_656540_7 Pyridoxamine 5'-phosphate oxidase like - - - 0.0000000000000000000000000000000000000000000000000008283 186.0
BYD3_k127_656540_8 Protein of unknown function (DUF1428) - - - 0.0000000000000000000000000000000000000000000000002649 179.0
BYD3_k127_656540_9 PFAM SNARE associated Golgi protein - - - 0.000005576 58.0
BYD3_k127_6580337_0 Belongs to the UbiD family K03182 - 4.1.1.98 8.912e-269 833.0
BYD3_k127_6580337_1 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 342.0
BYD3_k127_6580337_2 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 344.0
BYD3_k127_6580337_3 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 321.0
BYD3_k127_6580337_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007791 286.0
BYD3_k127_6580337_5 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000122 244.0
BYD3_k127_6580337_6 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.0000000000000000000000000000000000000000000000000000000000000000000007447 244.0
BYD3_k127_6580337_7 PFAM Lytic transglycosylase catalytic - - - 0.0000000000000000000000000000000000000000000000000009488 188.0
BYD3_k127_6619004_0 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 403.0
BYD3_k127_6619004_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 397.0
BYD3_k127_6619004_2 peptidase K06194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 318.0
BYD3_k127_6619004_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002538 294.0
BYD3_k127_6619775_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261 - 1.4.1.2,1.4.1.3 2.292e-240 748.0
BYD3_k127_6619775_1 twitching motility protein K02670 - - 2.546e-221 689.0
BYD3_k127_6619775_10 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001371 241.0
BYD3_k127_6619775_11 BON domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001869 243.0
BYD3_k127_6619775_12 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000002282 220.0
BYD3_k127_6619775_13 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000000000000000000009529 170.0
BYD3_k127_6619775_2 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 5.231e-221 694.0
BYD3_k127_6619775_3 twitching motility protein K02669,K12203 - - 2.012e-210 656.0
BYD3_k127_6619775_4 hmm pf00501 K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 555.0
BYD3_k127_6619775_5 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006520,GO:0006573,GO:0006574,GO:0006807,GO:0008150,GO:0008152,GO:0008442,GO:0009056,GO:0009063,GO:0009081,GO:0009083,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0055114,GO:0070013,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 509.0
BYD3_k127_6619775_6 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 474.0
BYD3_k127_6619775_7 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 368.0
BYD3_k127_6619775_8 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 361.0
BYD3_k127_6619775_9 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 325.0
BYD3_k127_6622287_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K02182 - 6.2.1.48 4.832e-258 804.0
BYD3_k127_6622287_1 acetyl-coa acetyltransferase - - - 7.588e-208 662.0
BYD3_k127_6622287_2 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K14748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 287.0
BYD3_k127_6622287_3 2'-aminobiphenyl-2,3-diol 1,2-dioxygenase, CarBa. Involved in the aerobic degradation of carbazole by P.resinovorans sp. strain CA10 K14749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001271 259.0
BYD3_k127_6630934_0 PFAM cyclase family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 515.0
BYD3_k127_6630934_1 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 428.0
BYD3_k127_6630934_2 regulatory protein TetR - - - 0.0000000000000000000000000000000000000000000000000000000001972 225.0
BYD3_k127_6630934_3 PFAM fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 0.000000000000000000000000000000000000000000000001044 179.0
BYD3_k127_6630934_4 Tannase and feruloyl esterase - - - 0.0000000000000000000000002204 115.0
BYD3_k127_6630934_5 helix_turn_helix, arabinose operon control protein K07506 - - 0.0000000000000000000001538 109.0
BYD3_k127_6648175_0 Threonine synthase K01733 - 4.2.3.1 8.087e-232 728.0
BYD3_k127_6648175_1 homoserine dehydrogenase K00003 - 1.1.1.3 7.75e-226 706.0
BYD3_k127_6648175_2 Molybdenum cofactor synthesis domain protein K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 520.0
BYD3_k127_6648175_3 Molybdopterin biosynthesis MoaE protein K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000003703 250.0
BYD3_k127_6648175_4 PFAM Aminotransferase class I and II K14260 - 2.6.1.2,2.6.1.66 0.000000000000000000000000000000000000000000000000000000000425 202.0
BYD3_k127_6648175_5 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000002475 139.0
BYD3_k127_6648175_6 Flavin reductase like domain - - - 0.00000000000000000000000000000000106 139.0
BYD3_k127_6648175_7 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.00000000000000000000000004191 115.0
BYD3_k127_6661015_0 Belongs to the radical SAM superfamily. PqqE family K06139 - - 1.404e-207 650.0
BYD3_k127_6661015_1 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 368.0
BYD3_k127_6661015_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007157 357.0
BYD3_k127_6661015_3 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000003595 210.0
BYD3_k127_6661015_4 Sulphur oxidation protein SoxZ K17226 - - 0.00000000000636 66.0
BYD3_k127_6680377_0 LD-carboxypeptidase K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004355 381.0
BYD3_k127_6680377_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000006055 259.0
BYD3_k127_6680377_2 SURF4 family K15977 - - 0.0000000000000000000000000000000000000000000005242 173.0
BYD3_k127_6680377_3 PFAM regulatory protein TetR - - - 0.000000000005337 72.0
BYD3_k127_6680377_4 - - - - 0.00005114 50.0
BYD3_k127_6680595_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 292.0
BYD3_k127_6680595_1 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001021 282.0
BYD3_k127_6680595_2 Doubled CXXCH motif (Paired_CXXCH_1) K08354 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008848 277.0
BYD3_k127_6688943_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.688e-307 947.0
BYD3_k127_6688943_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.068e-283 876.0
BYD3_k127_6688943_10 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 318.0
BYD3_k127_6688943_11 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 310.0
BYD3_k127_6688943_12 cytochrome - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003592 276.0
BYD3_k127_6688943_13 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002358 250.0
BYD3_k127_6688943_14 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003487 242.0
BYD3_k127_6688943_15 TPM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000006752 234.0
BYD3_k127_6688943_16 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000000000000000000000006657 230.0
BYD3_k127_6688943_17 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000000000000000000007071 234.0
BYD3_k127_6688943_18 PFAM cytochrome c - - - 0.00000000000000000000000000000000000000000000000000498 187.0
BYD3_k127_6688943_19 ATP synthase I chain K02116 - - 0.00000000000000000000000000000000000000000000000002279 184.0
BYD3_k127_6688943_2 PFAM Aminotransferase class I and II K05825 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 602.0
BYD3_k127_6688943_20 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000000000002369 145.0
BYD3_k127_6688943_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 483.0
BYD3_k127_6688943_4 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 486.0
BYD3_k127_6688943_5 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006902 419.0
BYD3_k127_6688943_6 Polyphosphate kinase 2 (PPK2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 385.0
BYD3_k127_6688943_7 related to alanyl-tRNA synthetase HxxxH domain K07050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 374.0
BYD3_k127_6688943_8 Aldose 1-epimerase K01785 - 5.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 369.0
BYD3_k127_6688943_9 phenazine biosynthesis protein PhzF family K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 361.0
BYD3_k127_670982_0 TIGRFAM type I secretion outer membrane protein, TolC family K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 488.0
BYD3_k127_670982_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006704 429.0
BYD3_k127_670982_2 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 314.0
BYD3_k127_670982_3 Bacterial transcriptional repressor C-terminal K09017 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002725 281.0
BYD3_k127_6718662_0 PQQ enzyme repeat - - - 0.0 1157.0
BYD3_k127_6718662_1 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 443.0
BYD3_k127_6718662_2 SMART Extracellular solute-binding protein, family 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008187 433.0
BYD3_k127_6718662_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002811 231.0
BYD3_k127_6718662_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000639 196.0
BYD3_k127_6718662_5 - - - - 0.000000000000000000000000000000004084 141.0
BYD3_k127_6718662_6 Sulphur oxidation protein SoxZ K17226 - - 0.000000009352 64.0
BYD3_k127_6737794_0 cytochrome C peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 387.0
BYD3_k127_6737794_1 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000001122 169.0
BYD3_k127_6737794_2 Electron transport protein SCO1 SenC K07152 - - 0.000000000000000000000000000834 120.0
BYD3_k127_6737794_3 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000007188 99.0
BYD3_k127_6737794_4 cytochrome c K00406 - - 0.000000000000003305 82.0
BYD3_k127_6774331_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000005252 259.0
BYD3_k127_6774331_1 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000001414 228.0
BYD3_k127_6774331_2 synthetase K16029 - - 0.00000000000000000000000000000000000000002533 172.0
BYD3_k127_681025_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1091.0
BYD3_k127_681025_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14392 - - 1.273e-228 717.0
BYD3_k127_681025_10 Regulatory protein, FmdB family - - - 0.0000000000000000000000000001317 122.0
BYD3_k127_681025_2 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 7.75e-217 677.0
BYD3_k127_681025_3 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 555.0
BYD3_k127_681025_4 Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003838 408.0
BYD3_k127_681025_5 FAD binding domain K00480,K20940 - 1.14.13.1,1.14.13.218 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 363.0
BYD3_k127_681025_6 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 299.0
BYD3_k127_681025_7 Nudix hydrolase K08310 - 3.6.1.67 0.000000000000000000000000000000000000000000000000000000000000000000000000007549 254.0
BYD3_k127_681025_8 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000001146 227.0
BYD3_k127_681025_9 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000005142 222.0
BYD3_k127_6815965_0 belongs to the aldehyde dehydrogenase family K00130,K00146 - 1.2.1.39,1.2.1.8 2.745e-267 833.0
BYD3_k127_6815965_1 ABC transporter substrate-binding protein K01999 - - 1.216e-242 752.0
BYD3_k127_6815965_10 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 406.0
BYD3_k127_6815965_11 ATPases associated with a variety of cellular activities K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 374.0
BYD3_k127_6815965_12 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 350.0
BYD3_k127_6815965_13 helix_turn_helix, arabinose operon control protein K07506 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007232 308.0
BYD3_k127_6815965_14 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008016 286.0
BYD3_k127_6815965_15 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 300.0
BYD3_k127_6815965_16 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005046 254.0
BYD3_k127_6815965_17 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008736 270.0
BYD3_k127_6815965_18 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000007812 161.0
BYD3_k127_6815965_19 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000001879 93.0
BYD3_k127_6815965_2 Transporter associated domain K11105 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008225 600.0
BYD3_k127_6815965_20 Stress responsive A/B Barrel Domain - - - 0.000000000000000000005875 96.0
BYD3_k127_6815965_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 570.0
BYD3_k127_6815965_4 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 542.0
BYD3_k127_6815965_5 PFAM iron-containing alcohol dehydrogenase K00217 - 1.3.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009568 479.0
BYD3_k127_6815965_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007231 460.0
BYD3_k127_6815965_7 AAA domain, putative AbiEii toxin, Type IV TA system K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008643 433.0
BYD3_k127_6815965_8 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 416.0
BYD3_k127_6815965_9 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 406.0
BYD3_k127_6819569_0 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005231 401.0
BYD3_k127_6819569_1 TonB-dependent Receptor Plug Domain K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 396.0
BYD3_k127_6819569_2 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005875 314.0
BYD3_k127_6819569_3 ABC transporter K02013 - 3.6.3.34 0.000000000000000000000005616 116.0
BYD3_k127_6823552_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.039e-225 707.0
BYD3_k127_6823552_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 537.0
BYD3_k127_6823552_2 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 416.0
BYD3_k127_683149_0 Bacterial protein of unknown function (DUF839) K07093 - - 1.03e-303 956.0
BYD3_k127_683149_1 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 518.0
BYD3_k127_683149_2 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 458.0
BYD3_k127_683149_3 SMART AAA ATPase K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000414 434.0
BYD3_k127_683149_4 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002314 290.0
BYD3_k127_683149_5 Protein of unknown function (DUF3237) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001115 237.0
BYD3_k127_683149_6 Universal stress protein family - - - 0.0000000000000000000000000000009437 125.0
BYD3_k127_6833234_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.0 1066.0
BYD3_k127_6833234_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 5.521e-269 831.0
BYD3_k127_6833234_10 Succinate dehydrogenase cytochrome b556 subunit K00241 - - 0.000000000000000000000000000000000000000000000000003505 185.0
BYD3_k127_6833234_11 monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000009247 188.0
BYD3_k127_6833234_12 Flavinator of succinate dehydrogenase K09159 - - 0.000000000000000000000000000001886 123.0
BYD3_k127_6833234_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 578.0
BYD3_k127_6833234_3 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 490.0
BYD3_k127_6833234_4 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 450.0
BYD3_k127_6833234_5 Patatin-like phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 360.0
BYD3_k127_6833234_6 UTRA K03710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 345.0
BYD3_k127_6833234_7 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 289.0
BYD3_k127_6833234_8 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001387 280.0
BYD3_k127_6833234_9 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 - - 0.00000000000000000000000000000000000000000000000000000002499 198.0
BYD3_k127_6849838_0 - - - - 1.662e-253 798.0
BYD3_k127_6849838_1 serine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 397.0
BYD3_k127_6849838_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000008044 229.0
BYD3_k127_6849838_3 - - - - 0.00000000000000000000000001812 118.0
BYD3_k127_6849838_4 Bacterial protein of unknown function (Gcw_chp) - - - 0.0000000000000001023 90.0
BYD3_k127_6856961_0 peptidase S45, penicillin amidase K01434 - 3.5.1.11 4e-323 1007.0
BYD3_k127_6856961_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 567.0
BYD3_k127_6856961_10 Lysine exporter protein LysE K11250 - - 0.00000000000000000000000000008768 118.0
BYD3_k127_6856961_11 PFAM Cytochrome c, class I - - - 0.000000000242 71.0
BYD3_k127_6856961_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 398.0
BYD3_k127_6856961_3 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006143 379.0
BYD3_k127_6856961_4 Asparaginase K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007328 335.0
BYD3_k127_6856961_5 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007076 323.0
BYD3_k127_6856961_6 Domain of unknown function (DUF1993) K09983 - - 0.00000000000000000000000000000000000000000000000000000000001663 211.0
BYD3_k127_6856961_7 Chromate transporter K07240 - - 0.0000000000000000000000000000000000000000000000000000000005731 223.0
BYD3_k127_6856961_8 chromate transporter K07240 - - 0.000000000000000000000000000000000000000000000002964 188.0
BYD3_k127_6856961_9 Pathogenicity locus K07343 - - 0.0000000000000000000000000000000000000002034 155.0
BYD3_k127_6873042_0 Helicase K03724 - - 0.0 1762.0
BYD3_k127_6873042_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 574.0
BYD3_k127_6873042_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009458 565.0
BYD3_k127_6873042_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 503.0
BYD3_k127_6873042_4 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005936 466.0
BYD3_k127_6873042_5 Serves to protect cells from the toxic effects of hydrogen peroxide K03781 - 1.11.1.6 0.0000000000000000000000008046 107.0
BYD3_k127_6882489_0 GTP cyclohydrolase N terminal - - - 1.736e-221 691.0
BYD3_k127_6882489_1 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 574.0
BYD3_k127_6882489_2 GGDEF domain - - - 0.00000000000000000000000000000006711 137.0
BYD3_k127_6888807_0 to Mus musculus sphingosine-1-phosphate lyase Sgpl1 SWALL O54955 (EMBL AF036894) (568 aa) fasta scores E() K01634 - 4.1.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005069 594.0
BYD3_k127_6888807_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 441.0
BYD3_k127_6888807_2 Bacterial extracellular solute-binding protein K02055 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 382.0
BYD3_k127_6888807_3 FCD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 300.0
BYD3_k127_6890152_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 5.833e-231 723.0
BYD3_k127_6890152_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.586e-229 722.0
BYD3_k127_6890152_10 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 300.0
BYD3_k127_6890152_11 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 304.0
BYD3_k127_6890152_12 Protein of unknown function (DUF2726) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000324 239.0
BYD3_k127_6890152_13 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000000000000025 184.0
BYD3_k127_6890152_14 - - - - 0.0000000000000000000000000000000000000007227 152.0
BYD3_k127_6890152_15 - - - - 0.000000000000000000000000003456 118.0
BYD3_k127_6890152_16 - - - - 0.0000000000000005096 81.0
BYD3_k127_6890152_17 - K06950 - - 0.00000000000002 76.0
BYD3_k127_6890152_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 6.611e-216 681.0
BYD3_k127_6890152_3 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 3.374e-208 665.0
BYD3_k127_6890152_4 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 9.545e-195 612.0
BYD3_k127_6890152_5 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 547.0
BYD3_k127_6890152_6 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 454.0
BYD3_k127_6890152_7 response regulator K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 391.0
BYD3_k127_6890152_8 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 317.0
BYD3_k127_6890152_9 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006299 313.0
BYD3_k127_6897401_0 TonB dependent receptor K02014 - - 0.0 1078.0
BYD3_k127_6897401_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 549.0
BYD3_k127_6897401_2 PFAM ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002214 249.0
BYD3_k127_6897401_3 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000000000000000000000000000000000008315 207.0
BYD3_k127_6897401_4 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000001816 138.0
BYD3_k127_6897962_0 DNA ligase N terminus K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 7.141e-234 736.0
BYD3_k127_6897962_1 Exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006425 476.0
BYD3_k127_6897962_2 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 402.0
BYD3_k127_6897962_3 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003426 282.0
BYD3_k127_6897962_4 Peptidyl-prolyl cis-trans K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000002411 201.0
BYD3_k127_6897962_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000007204 188.0
BYD3_k127_6897962_6 - - - - 0.000000000000000000000000000006043 127.0
BYD3_k127_6897962_7 Aldolase/RraA K02553 - - 0.0000005395 62.0
BYD3_k127_6910638_0 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 451.0
BYD3_k127_6910638_1 Phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 357.0
BYD3_k127_6910638_2 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001131 266.0
BYD3_k127_6910638_3 Sortase and related acyltransferases K03823 - 2.3.1.183 0.000000000000000000000000000000000000000000000000000000000000000000000001279 247.0
BYD3_k127_691248_0 PFAM Basic membrane lipoprotein K02058 - - 5.509e-204 639.0
BYD3_k127_691248_1 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K21053 - 3.5.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 526.0
BYD3_k127_691248_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 298.0
BYD3_k127_691248_3 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000005959 264.0
BYD3_k127_691248_4 Phosphoenolpyruvate phosphomutase - - - 0.000000000000000001756 95.0
BYD3_k127_691248_5 - - - - 0.000000000008141 72.0
BYD3_k127_6912784_0 Domain of unknown function (DUF4113) K03502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 500.0
BYD3_k127_6912784_1 Peptidase S24-like K03503 - - 0.00000000000000000000000000000000000004067 149.0
BYD3_k127_6916810_0 Transport of potassium into the cell K03549 - - 0.0 1049.0
BYD3_k127_6916810_1 Ammonium Transporter K03320 - - 2.211e-256 799.0
BYD3_k127_6916810_2 Glutamate-cysteine ligase K01919 - 6.3.2.2 9.197e-251 777.0
BYD3_k127_6916810_3 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 402.0
BYD3_k127_6961108_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1306.0
BYD3_k127_6961108_1 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 5.772e-285 884.0
BYD3_k127_6961108_10 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 301.0
BYD3_k127_6961108_11 Methionine aminopeptidase K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000003559 256.0
BYD3_k127_6961108_12 Protein of unknown function (DUF2788) - - - 0.000000000000000000000000000001244 121.0
BYD3_k127_6961108_2 Belongs to the thiolase family K00626 - 2.3.1.9 1.117e-217 683.0
BYD3_k127_6961108_3 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 495.0
BYD3_k127_6961108_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.1.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 447.0
BYD3_k127_6961108_5 TIGRFAM type I secretion system ATPase K12541 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 411.0
BYD3_k127_6961108_6 fumarylacetoacetate (FAA) hydrolase K16165 - 3.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 366.0
BYD3_k127_6961108_7 maleylacetoacetate isomerase K01800,K01801 - 5.2.1.2,5.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 362.0
BYD3_k127_6961108_8 Predicted integral membrane protein (DUF2189) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 327.0
BYD3_k127_6961108_9 Nudix hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 304.0
BYD3_k127_6965816_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 593.0
BYD3_k127_6965816_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 529.0
BYD3_k127_6965816_10 Transcriptional regulator IclR K02624 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 363.0
BYD3_k127_6965816_11 Shikimate dehydrogenase substrate binding domain protein K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 353.0
BYD3_k127_6965816_12 oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 324.0
BYD3_k127_6965816_13 carbohydrate transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001111 292.0
BYD3_k127_6965816_14 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006254 250.0
BYD3_k127_6965816_15 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000004352 248.0
BYD3_k127_6965816_16 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000001238 183.0
BYD3_k127_6965816_17 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000004668 178.0
BYD3_k127_6965816_18 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000006092 142.0
BYD3_k127_6965816_19 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.0000000000000000000000000000004897 133.0
BYD3_k127_6965816_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 486.0
BYD3_k127_6965816_3 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 469.0
BYD3_k127_6965816_4 Xylose isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 451.0
BYD3_k127_6965816_5 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 438.0
BYD3_k127_6965816_6 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004675 430.0
BYD3_k127_6965816_7 mannitol 2-dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 447.0
BYD3_k127_6965816_8 abc transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000608 391.0
BYD3_k127_6965816_9 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 385.0
BYD3_k127_702086_0 GAF domain K21405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 483.0
BYD3_k127_702086_1 Formaldehyde-activating enzyme (Fae) K10713 - 4.2.1.147 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 309.0
BYD3_k127_702086_2 ATP:dephospho-CoA triphosphoribosyl transferase K05966 - 2.4.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 299.0
BYD3_k127_702086_3 Dihydroneopterin aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000000000000000000000000000000000275 201.0
BYD3_k127_7022155_0 von willebrand factor, type A K20276 - - 0.0 1114.0
BYD3_k127_7022155_1 Dehydrogenase K00382 - 1.8.1.4 1.134e-311 962.0
BYD3_k127_7022155_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00382,K00627 - 1.8.1.4,2.3.1.12 9.714e-234 734.0
BYD3_k127_7022155_3 LapD/MoxY periplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005299 539.0
BYD3_k127_7022155_4 TIGRFAM type I secretion outer membrane protein, TolC family K12543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006074 537.0
BYD3_k127_7022155_5 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 GO:0000287,GO:0003674,GO:0003824,GO:0004738,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0019842,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363,GO:1901681 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 495.0
BYD3_k127_7022155_6 von Willebrand factor, type A K12549 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 511.0
BYD3_k127_7022155_7 PFAM 20S proteasome, A and B subunits K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 317.0
BYD3_k127_7022155_8 Bacterial transglutaminase-like cysteine proteinase BTLCP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001305 284.0
BYD3_k127_705862_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009673 557.0
BYD3_k127_705862_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 522.0
BYD3_k127_705862_2 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 365.0
BYD3_k127_705862_3 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 287.0
BYD3_k127_705862_4 COG2199 FOG GGDEF domain - - - 0.0000000000000000000000000000000000000000357 162.0
BYD3_k127_7073373_0 branched-chain amino acid permease (azaleucine resistance) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 315.0
BYD3_k127_7073373_1 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000694 229.0
BYD3_k127_7073373_2 Putative auto-transporter adhesin, head GIN domain - - - 0.0000000000000000000000000000000001203 142.0
BYD3_k127_7073373_3 - - - - 0.00000000000000000000000003428 119.0
BYD3_k127_7073373_4 PFAM branched-chain amino acid transport - - - 0.000000000000000000001312 96.0
BYD3_k127_7080017_0 Exporters of the RND superfamily K07003 - - 0.0 1096.0
BYD3_k127_7080017_1 Carboxylesterase family K01066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006746 289.0
BYD3_k127_7080017_2 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000000000000000000001203 228.0
BYD3_k127_7082688_0 PFAM Cys Met metabolism K01740 - 2.5.1.49 8.109e-250 776.0
BYD3_k127_7082688_1 Periplasmic binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006457 557.0
BYD3_k127_7082688_2 PFAM Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 524.0
BYD3_k127_7082688_3 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 413.0
BYD3_k127_7082688_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009673 377.0
BYD3_k127_7102706_0 AAA domain - - - 3.658e-240 769.0
BYD3_k127_7102706_1 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 419.0
BYD3_k127_7102706_2 3-beta hydroxysteroid dehydrogenase - - - 0.000000000000000000000000829 117.0
BYD3_k127_7102706_3 - - - - 0.000000000000000000176 90.0
BYD3_k127_7102706_4 Histidine kinase - - - 0.0000000000000002294 84.0
BYD3_k127_7147646_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11745,K11747 - - 2.251e-252 792.0
BYD3_k127_7147646_1 ABC-type dipeptide transport system, periplasmic component K02035 - - 2.57e-214 670.0
BYD3_k127_7147646_2 ATPase MipZ K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008555 305.0
BYD3_k127_7147646_3 Flavodoxin-like fold K00355,K11746,K11748 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 298.0
BYD3_k127_7147646_4 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002159 278.0
BYD3_k127_7147646_5 PFAM MaoC domain protein dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000004377 217.0
BYD3_k127_7147646_6 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000002086 211.0
BYD3_k127_7147646_7 Domain of unknown function (DUF1841) - - - 0.000000000000000000000000000000000000000000000000000000000003798 211.0
BYD3_k127_7156583_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1088.0
BYD3_k127_7156583_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 364.0
BYD3_k127_7156583_2 Formate/nitrite transporter K02598,K06212 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 353.0
BYD3_k127_7156583_3 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 305.0
BYD3_k127_7156583_4 PFAM Bacterial regulatory protein, arsR family K22298 - - 0.0000000000000000000000000000000000000000000000622 172.0
BYD3_k127_7156583_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000005094 93.0
BYD3_k127_7156699_0 Amidase, hydantoinase carbamoylase family K02083,K06016 - 3.5.1.6,3.5.1.87,3.5.3.9 9.87e-290 901.0
BYD3_k127_7156699_1 FAD binding domain - - - 2.421e-226 714.0
BYD3_k127_7156699_10 Alanine acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000008335 234.0
BYD3_k127_7156699_11 AraC-binding-like domain - - - 0.000000000000000000000000000000000000000000000000000001783 196.0
BYD3_k127_7156699_12 Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily K07127 - 3.5.2.17 0.00000000000000000000000000000000000000000005164 170.0
BYD3_k127_7156699_13 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.0000000000000000000003838 108.0
BYD3_k127_7156699_2 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 597.0
BYD3_k127_7156699_3 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 623.0
BYD3_k127_7156699_4 deacetylase K01452 - 3.5.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 588.0
BYD3_k127_7156699_5 NMT1/THI5 like K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 572.0
BYD3_k127_7156699_6 Carbon-nitrogen hydrolase K01502 - 3.5.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003419 569.0
BYD3_k127_7156699_7 Haem-containing dehydratase K13028 - 4.99.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 502.0
BYD3_k127_7156699_8 regulatory protein GntR HTH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 309.0
BYD3_k127_7156699_9 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002819 259.0
BYD3_k127_7160478_0 Ammonium Transporter K03320,K06580 - - 5.944e-232 722.0
BYD3_k127_7160478_1 Cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004144 466.0
BYD3_k127_7160478_10 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000003233 216.0
BYD3_k127_7160478_11 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000003067 175.0
BYD3_k127_7160478_12 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000001505 154.0
BYD3_k127_7160478_13 regulator - - - 0.000000000000000000000000000000009254 136.0
BYD3_k127_7160478_14 Family of unknown function (DUF5329) - - - 0.0000000000000000000000000000116 122.0
BYD3_k127_7160478_15 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000003358 117.0
BYD3_k127_7160478_16 helix_turn_helix, Arsenical Resistance Operon Repressor - GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043254,GO:0044087,GO:0044212,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0090034,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000001256 104.0
BYD3_k127_7160478_17 - - - - 0.000642 49.0
BYD3_k127_7160478_2 DNA alkylation repair - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 445.0
BYD3_k127_7160478_3 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 450.0
BYD3_k127_7160478_4 AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 411.0
BYD3_k127_7160478_5 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 354.0
BYD3_k127_7160478_6 aconitate hydratase K01681 - 4.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008669 321.0
BYD3_k127_7160478_7 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 294.0
BYD3_k127_7160478_8 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005519 280.0
BYD3_k127_7160478_9 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000122 230.0
BYD3_k127_7198095_0 FtsX-like permease family K02004 - - 1.562e-319 997.0
BYD3_k127_7198095_1 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 583.0
BYD3_k127_7198095_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 596.0
BYD3_k127_7198095_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 458.0
BYD3_k127_7198095_4 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 346.0
BYD3_k127_7198095_5 acetylesterase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000804 327.0
BYD3_k127_7198095_6 HlyD family secretion protein K02005 - - 0.0000000000000000000000000000000000000000000000000000001783 201.0
BYD3_k127_7198095_7 AMP binding - - - 0.0000000000000000001824 93.0
BYD3_k127_7220181_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 2.624e-273 846.0
BYD3_k127_7220181_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 3.219e-199 627.0
BYD3_k127_7220181_2 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005076 602.0
BYD3_k127_7220181_3 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K05816,K10111,K10112 - 3.6.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008211 548.0
BYD3_k127_7220181_4 probably responsible for the translocation of the substrate across the membrane K02026,K05815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 478.0
BYD3_k127_7220181_5 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 325.0
BYD3_k127_7220181_6 PFAM binding-protein-dependent transport systems inner membrane component K05814 - - 0.00000000000000000000000000000000000000000000000000000000000001448 216.0
BYD3_k127_7220181_7 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.0000000000000000000000000000000000000000000000000000002003 209.0
BYD3_k127_7268421_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 GO:0000287,GO:0003674,GO:0003824,GO:0004738,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0019842,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363,GO:1901681 1.2.4.1 0.0 1240.0
BYD3_k127_7268421_1 Histidine kinase - - - 0.0 1210.0
BYD3_k127_7268421_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 431.0
BYD3_k127_7268421_3 Regulator K13041 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 395.0
BYD3_k127_7268421_4 Peptidase family M3 K01414 - 3.4.24.70 0.000000000000000000000000000000000000000000000000000000006356 204.0
BYD3_k127_7285508_0 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K12132 - 2.7.11.1,3.1.3.16 2.671e-250 784.0
BYD3_k127_7285508_1 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362,K05297 - 1.18.1.1,1.7.1.15 8.255e-241 756.0
BYD3_k127_7285508_2 Major Facilitator Superfamily K02575 - - 3.53e-224 705.0
BYD3_k127_7285508_3 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K15578 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008488 595.0
BYD3_k127_7285508_4 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362,K05297 - 1.18.1.1,1.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 604.0
BYD3_k127_7285508_5 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 506.0
BYD3_k127_7285508_6 ANTAR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002253 266.0
BYD3_k127_7285508_7 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000007137 241.0
BYD3_k127_7285508_8 Belongs to the globin family - - - 0.000000000000000000000000000000000000000000002672 173.0
BYD3_k127_7285508_9 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.0000000000000003215 90.0
BYD3_k127_7289211_0 MlaD protein K06192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007651 481.0
BYD3_k127_7289211_1 PFAM Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007217 431.0
BYD3_k127_7289211_2 paraquat-inducible protein A K03808 - - 0.00000000000000000000000000000000000000000000000000000000245 216.0
BYD3_k127_7289211_3 paraquat-inducible protein A K03808 - - 0.00000000000000000000000000000001506 135.0
BYD3_k127_7289211_4 ABC-type transport auxiliary lipoprotein component K09857 - - 0.0000000000000000001322 104.0
BYD3_k127_729955_0 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007868 386.0
BYD3_k127_729955_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 295.0
BYD3_k127_729955_2 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005864 299.0
BYD3_k127_729955_3 branched-chain amino acid K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004095 276.0
BYD3_k127_729955_4 Aminotransferase class I and II K00832 - 2.6.1.57 0.0000000000000000000000000000000000000001013 152.0
BYD3_k127_731585_0 Histidine kinase - - - 1.597e-207 674.0
BYD3_k127_731585_1 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 347.0
BYD3_k127_731585_10 CreA protein K05805 - - 0.0000000000000000000000000000000000000001318 154.0
BYD3_k127_731585_11 Domain of unknown function (DUF4397) - - - 0.0000000000000000000172 103.0
BYD3_k127_731585_12 - - - - 0.0000000000000001776 89.0
BYD3_k127_731585_13 Domain of unknown function (DUF4397) - - - 0.0005536 46.0
BYD3_k127_731585_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 321.0
BYD3_k127_731585_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K05962 - 2.7.13.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 315.0
BYD3_k127_731585_4 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000001315 233.0
BYD3_k127_731585_5 FCD domain - - - 0.00000000000000000000000000000000000000000000000000000000000002301 222.0
BYD3_k127_731585_6 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000454 209.0
BYD3_k127_731585_7 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000001112 214.0
BYD3_k127_731585_8 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000001466 198.0
BYD3_k127_731585_9 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000000000002421 176.0
BYD3_k127_7328389_0 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003717 460.0
BYD3_k127_7328389_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000544 449.0
BYD3_k127_7328389_2 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 300.0
BYD3_k127_7380800_0 PFAM NnrS family protein K07234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007007 501.0
BYD3_k127_7380800_1 Virulence factor BrkB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007156 413.0
BYD3_k127_7380800_2 Vitamin k epoxide reductase - - - 0.00000000000000000000000000000000000000000000001469 174.0
BYD3_k127_7380800_3 SMART Transport-associated and nodulation region K04065 - - 0.00000000000000000000000000000000004595 139.0
BYD3_k127_7380800_4 Transposase K00507 - 1.14.19.1 0.000001995 50.0
BYD3_k127_7380800_5 - - - - 0.00001734 49.0
BYD3_k127_7380800_6 Virulence factor BrkB K07058 - - 0.00007547 49.0
BYD3_k127_7390897_0 Bacterial protein of unknown function (DUF885) - - - 1.148e-217 694.0
BYD3_k127_7390897_1 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 496.0
BYD3_k127_7390897_10 deoxyhypusine monooxygenase activity K05384,K05386 - - 0.0000000000000000000000000000000000000000000000000002183 202.0
BYD3_k127_7390897_11 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000001884 188.0
BYD3_k127_7390897_12 - - - - 0.000000000000000000000000000000000000000000002281 174.0
BYD3_k127_7390897_13 phosphohistidine phosphatase, SixA K08296 - - 0.00000000000000000000000000000000000000000001414 169.0
BYD3_k127_7390897_14 Protein of unknown function (DUF423) - - - 0.000000000000000000000000000000000000000001208 162.0
BYD3_k127_7390897_15 Secretion system type I outer membrane efflux pump lipoprotein NodT K18139 - - 0.0000000000000000000000000000000000001605 147.0
BYD3_k127_7390897_16 - - - - 0.00000000000000000000000000000005685 135.0
BYD3_k127_7390897_17 - - - - 0.000000000000000000000000000003886 125.0
BYD3_k127_7390897_18 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000005258 92.0
BYD3_k127_7390897_19 - - - - 0.00000000000000001121 91.0
BYD3_k127_7390897_2 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 443.0
BYD3_k127_7390897_3 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007918 438.0
BYD3_k127_7390897_4 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004139 396.0
BYD3_k127_7390897_5 Transcriptional regulator, LysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991 376.0
BYD3_k127_7390897_6 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005388 336.0
BYD3_k127_7390897_7 WYL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 303.0
BYD3_k127_7390897_8 NnrU protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001917 226.0
BYD3_k127_7390897_9 YHS domain protein - - - 0.0000000000000000000000000000000000000000000000000000005314 197.0
BYD3_k127_7420568_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 3.799e-222 695.0
BYD3_k127_7420568_1 Alanine dehydrogenase/PNT, C-terminal domain K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 543.0
BYD3_k127_7420568_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002768 267.0
BYD3_k127_7420568_11 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001107 253.0
BYD3_k127_7420568_12 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000002407 224.0
BYD3_k127_7420568_13 NmrA family - - - 0.000000000000000000000000000000000000000000000000005567 194.0
BYD3_k127_7420568_14 NUDIX domain - - - 0.000000000000000000000000000000000000000000000007392 176.0
BYD3_k127_7420568_15 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000002947 171.0
BYD3_k127_7420568_16 Phosphotransferase enzyme family - - - 0.000000000000000000000206 97.0
BYD3_k127_7420568_17 Ketosteroid isomerase-related protein - - - 0.0000000000002016 83.0
BYD3_k127_7420568_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 518.0
BYD3_k127_7420568_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004815 418.0
BYD3_k127_7420568_4 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 425.0
BYD3_k127_7420568_5 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 402.0
BYD3_k127_7420568_6 Belongs to the UDP-glycosyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 322.0
BYD3_k127_7420568_7 short-chain dehydrogenase reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004596 298.0
BYD3_k127_7420568_8 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 298.0
BYD3_k127_7420568_9 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002362 299.0
BYD3_k127_7437191_0 Male sterility protein - - - 0.0 1150.0
BYD3_k127_7437191_1 FtsX-like permease family K02004 - - 4.617e-313 980.0
BYD3_k127_7437191_10 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009564 353.0
BYD3_k127_7437191_11 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 344.0
BYD3_k127_7437191_12 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003416 355.0
BYD3_k127_7437191_13 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 286.0
BYD3_k127_7437191_14 Poly(hydroxyalcanoate) granule associated protein (phasin) - - - 0.00000000000000000000000000000000000000000000000000000007509 203.0
BYD3_k127_7437191_15 Belongs to the transcriptional regulatory Fis family K03557 - - 0.0000000000000000000000000000000001285 133.0
BYD3_k127_7437191_16 Major facilitator Superfamily - - - 0.000000000000000000000002033 113.0
BYD3_k127_7437191_17 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress - - - 0.000000000000000000004304 105.0
BYD3_k127_7437191_19 Protein of unknown function (DUF2933) - - - 0.00000000000001464 76.0
BYD3_k127_7437191_2 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 1.762e-247 773.0
BYD3_k127_7437191_20 Major Facilitator Superfamily - - - 0.00000000008091 70.0
BYD3_k127_7437191_21 nitric oxide dioxygenase activity K13735 - - 0.00001018 53.0
BYD3_k127_7437191_3 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00758 - 2.4.2.4 6.503e-227 716.0
BYD3_k127_7437191_4 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 3.056e-223 705.0
BYD3_k127_7437191_5 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 527.0
BYD3_k127_7437191_6 N-terminal domain of oxidoreductase K07119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007896 522.0
BYD3_k127_7437191_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 421.0
BYD3_k127_7437191_8 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 365.0
BYD3_k127_7437191_9 Isoprenylcysteine carboxyl methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 359.0
BYD3_k127_7455353_0 Putative nucleotide-binding of sugar-metabolising enzyme K21948 - 2.7.1.217 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 572.0
BYD3_k127_7455353_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K08319 - 1.1.1.31,1.1.1.411 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 471.0
BYD3_k127_7455353_2 Belongs to the hyi family K01816,K22131 - 5.3.1.22,5.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 456.0
BYD3_k127_7455353_3 Class II Aldolase and Adducin N-terminal domain K01628,K22130 - 4.1.1.104,4.1.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 333.0
BYD3_k127_7455353_4 7TMR-DISM extracellular 2 - - - 0.00000000000000000000000000000000000000000000000000000000000005362 222.0
BYD3_k127_7455353_5 Haloacid dehalogenase, type II K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000000007894 167.0
BYD3_k127_7465857_0 General secretory system II, protein E domain protein K02454,K02652 - - 4.828e-273 878.0
BYD3_k127_7465857_1 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 1.797e-214 672.0
BYD3_k127_7465857_2 PFAM TRAP dicarboxylate transporter- DctP subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 485.0
BYD3_k127_7465857_3 extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004919 444.0
BYD3_k127_7465857_4 Belongs to the D-glutamate cyclase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 368.0
BYD3_k127_7465857_5 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051 340.0
BYD3_k127_7465857_6 transcription regulator, contains HTH domain (MarR family) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 282.0
BYD3_k127_7465857_7 racemase activity, acting on amino acids and derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008946 278.0
BYD3_k127_7465857_8 Tripartite ATP-independent periplasmic transporter DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000009841 229.0
BYD3_k127_7465857_9 COG4665 TRAP-type mannitol chloroaromatic compound transport system small permease component - - - 0.00000000000000000000000358 117.0
BYD3_k127_7465953_0 AAA domain - - - 0.0 1204.0
BYD3_k127_7465953_1 serine protease K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007345 447.0
BYD3_k127_7465953_2 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000002961 157.0
BYD3_k127_7469295_0 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 1.614e-242 771.0
BYD3_k127_7469295_1 NMT1-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287 558.0
BYD3_k127_7469295_10 TonB dependent receptor - - - 0.0000000000000000000001919 96.0
BYD3_k127_7469295_11 - - - - 0.0000000000000000164 90.0
BYD3_k127_7469295_2 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 504.0
BYD3_k127_7469295_3 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 465.0
BYD3_k127_7469295_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 337.0
BYD3_k127_7469295_5 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008566 292.0
BYD3_k127_7469295_6 Domain of unknown function (DUF4439) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001909 239.0
BYD3_k127_7469295_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000004099 235.0
BYD3_k127_7469295_8 Domain of unknown function (DUF4198) - - - 0.00000000000000000000000000000000000000000000000000000000000105 224.0
BYD3_k127_7469295_9 ligase activity - - - 0.00000000000000000000000000000002458 128.0
BYD3_k127_7500671_0 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 453.0
BYD3_k127_7500671_1 AraC-binding-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006949 403.0
BYD3_k127_7500671_10 Carbon-nitrogen hydrolase K01502 - 3.5.5.7 0.0000000000000000001353 91.0
BYD3_k127_7500671_11 PFAM Amidase - - - 0.0000008271 54.0
BYD3_k127_7500671_2 Aldolase/RraA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 363.0
BYD3_k127_7500671_3 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 327.0
BYD3_k127_7500671_4 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005083 252.0
BYD3_k127_7500671_5 MaoC family - - - 0.000000000000000000000000000000000000000000000009319 177.0
BYD3_k127_7500671_6 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000001018 169.0
BYD3_k127_7500671_7 - - - - 0.000000000000000000000000000000000000000000008672 169.0
BYD3_k127_7500671_8 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000002752 169.0
BYD3_k127_7500671_9 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000000000000000000000000003297 139.0
BYD3_k127_7515139_0 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 2.822e-268 855.0
BYD3_k127_7515139_1 Domain of unknown function (DUF1705) K03760,K12975 - 2.7.8.42,2.7.8.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 589.0
BYD3_k127_7515139_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 415.0
BYD3_k127_7515139_3 Two component transcriptional regulator, winged helix family K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 319.0
BYD3_k127_7515139_4 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000001577 240.0
BYD3_k127_7515139_5 AAA domain K07028 - - 0.000000000000000000000005396 106.0
BYD3_k127_752969_0 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006278 548.0
BYD3_k127_752969_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 387.0
BYD3_k127_752969_2 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008355 355.0
BYD3_k127_752969_3 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 295.0
BYD3_k127_752969_4 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003015 244.0
BYD3_k127_752969_5 sigma 54 modulation protein ribosomal protein S30EA K05808 - - 0.000000000000000000000000000000000000000000000000000000002586 202.0
BYD3_k127_752969_6 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000003631 194.0
BYD3_k127_7548369_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1096.0
BYD3_k127_7548369_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008134 589.0
BYD3_k127_7548369_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 529.0
BYD3_k127_7548369_3 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007382 432.0
BYD3_k127_7548369_4 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 358.0
BYD3_k127_7548369_5 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000001172 221.0
BYD3_k127_7548369_6 Domain of unknown function (DUF4845) - - - 0.000000000000000000000000000000000000000000000006823 175.0
BYD3_k127_7558532_0 Extracellular liganD-binding receptor K01999 - - 4.297e-221 690.0
BYD3_k127_7558532_1 Amidohydrolase family - - - 2.395e-210 671.0
BYD3_k127_7558532_10 RNA-binding protein - - - 0.0000000000000000000000000000000000000006735 156.0
BYD3_k127_7558532_11 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000000001069 144.0
BYD3_k127_7558532_12 - - - - 0.0000000000000000002917 93.0
BYD3_k127_7558532_13 Bacterial regulatory proteins, tetR family - - - 0.0000000002703 70.0
BYD3_k127_7558532_2 Glycosyl Transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 612.0
BYD3_k127_7558532_3 Peptidase family S41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 359.0
BYD3_k127_7558532_4 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 353.0
BYD3_k127_7558532_5 methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 340.0
BYD3_k127_7558532_6 UbiC transcription regulator-associated K03710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 308.0
BYD3_k127_7558532_7 demethylmenaquinone methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 299.0
BYD3_k127_7558532_8 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000009313 177.0
BYD3_k127_7558532_9 Helix-turn-helix domain protein - - - 0.0000000000000000000000000000000000000000003429 167.0
BYD3_k127_7566442_0 PFAM CHAD domain containing protein K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001365 263.0
BYD3_k127_7566442_1 COG1960 Acyl-CoA dehydrogenases K00252 - 1.3.8.6 0.000000000000000000000000000000000000000008005 153.0
BYD3_k127_7571209_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 8.387e-306 947.0
BYD3_k127_7571209_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 311.0
BYD3_k127_7571209_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000000000000000000000007093 210.0
BYD3_k127_7580171_0 Hydantoinase/oxoprolinase N-terminal region K01469 - 3.5.2.9 0.0 1956.0
BYD3_k127_7580171_1 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000809 555.0
BYD3_k127_7580171_10 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000007335 93.0
BYD3_k127_7580171_11 - - - - 0.0000000000004363 73.0
BYD3_k127_7580171_2 Protein of unknown function (DUF692) K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007708 366.0
BYD3_k127_7580171_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002232 275.0
BYD3_k127_7580171_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002405 243.0
BYD3_k127_7580171_5 Protein of unknown function (DUF2848) - - - 0.000000000000000000000000000000000000000000000000000000000000454 235.0
BYD3_k127_7580171_6 Putative DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000001242 213.0
BYD3_k127_7580171_7 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000000001863 192.0
BYD3_k127_7580171_8 Resistance to Hg(2 ) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) K00520 - 1.16.1.1 0.0000000000000000000000000000000000000000004918 160.0
BYD3_k127_7580171_9 Predicted integral membrane protein (DUF2282) - - - 0.000000000000000000000000000000002823 133.0
BYD3_k127_7581725_0 Histidine kinase K11527 - 2.7.13.3 1.768e-194 641.0
BYD3_k127_7581725_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 572.0
BYD3_k127_7581725_2 PFAM Basic membrane lipoprotein K02058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005857 452.0
BYD3_k127_7581725_3 amine oxidase K00276 - 1.4.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 454.0
BYD3_k127_7581725_4 Protein of unknown function (DUF1298) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 317.0
BYD3_k127_7581725_5 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000007684 243.0
BYD3_k127_7581725_6 Phytochelatin synthase - - - 0.0000000000000000000000000000000000000000000000000000000002165 211.0
BYD3_k127_7585228_0 Bacterial transcriptional activator domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 615.0
BYD3_k127_7585228_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 287.0
BYD3_k127_7585228_2 Domain of unknown function (DUF4136) - - - 0.0000000000000000000000248 107.0
BYD3_k127_7585228_3 YMGG-like Gly-zipper - - - 0.00000000000000000002384 98.0
BYD3_k127_7585228_5 Peptidase family M23 - - - 0.000000002804 66.0
BYD3_k127_7592121_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1368.0
BYD3_k127_7592121_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 3.626e-241 752.0
BYD3_k127_7592121_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 2.763e-211 675.0
BYD3_k127_7592121_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 6.953e-201 629.0
BYD3_k127_7592121_4 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 579.0
BYD3_k127_7592121_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005351 258.0
BYD3_k127_7592121_6 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000000000000000000000001856 147.0
BYD3_k127_7592121_7 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000000000008577 139.0
BYD3_k127_7592121_8 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000000002655 84.0
BYD3_k127_7624522_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1184.0
BYD3_k127_7624522_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 1.563e-229 719.0
BYD3_k127_7624522_10 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 422.0
BYD3_k127_7624522_11 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 414.0
BYD3_k127_7624522_12 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007289 407.0
BYD3_k127_7624522_13 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 412.0
BYD3_k127_7624522_14 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 332.0
BYD3_k127_7624522_15 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 313.0
BYD3_k127_7624522_16 rRNA methyltransferase K03437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 308.0
BYD3_k127_7624522_17 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001953 285.0
BYD3_k127_7624522_18 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001421 272.0
BYD3_k127_7624522_19 Belongs to the skp family K06142 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006545 241.0
BYD3_k127_7624522_2 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 601.0
BYD3_k127_7624522_20 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000005438 226.0
BYD3_k127_7624522_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004923 532.0
BYD3_k127_7624522_4 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 529.0
BYD3_k127_7624522_5 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 531.0
BYD3_k127_7624522_6 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 526.0
BYD3_k127_7624522_7 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 471.0
BYD3_k127_7624522_8 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 440.0
BYD3_k127_7624522_9 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 430.0
BYD3_k127_7712464_0 PFAM Extracellular ligand-binding receptor K01999 - - 4.603e-199 627.0
BYD3_k127_7712464_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007241 489.0
BYD3_k127_7712464_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 482.0
BYD3_k127_7712464_3 Benzoate-CoA ligase family K04110 - 6.2.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003888 410.0
BYD3_k127_7712464_4 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 368.0
BYD3_k127_7712464_5 PFAM ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000001794 198.0
BYD3_k127_7713098_0 TIGRFAM ATP-dependent helicase HrpA K03578 - 3.6.4.13 0.0 2062.0
BYD3_k127_7713098_1 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 8.579e-251 780.0
BYD3_k127_7713098_2 Extracellular solute-binding protein K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 396.0
BYD3_k127_7713098_3 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000000000000003269 165.0
BYD3_k127_7713098_4 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.0000000000000000000000000000000000000000974 156.0
BYD3_k127_7713098_5 Transglycosylase associated protein - - - 0.0000000000000000000000000000001495 126.0
BYD3_k127_7713812_0 PFAM extracellular solute-binding protein family 1 K02027 - - 1.771e-246 766.0
BYD3_k127_7713812_1 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 GO:0000271,GO:0005575,GO:0005623,GO:0005975,GO:0005976,GO:0006073,GO:0006109,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009311,GO:0009312,GO:0009889,GO:0009987,GO:0010556,GO:0010675,GO:0010962,GO:0016051,GO:0019222,GO:0030288,GO:0030313,GO:0031323,GO:0031326,GO:0031975,GO:0032881,GO:0032885,GO:0032950,GO:0032951,GO:0033692,GO:0034637,GO:0034645,GO:0042597,GO:0043170,GO:0043255,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0050789,GO:0050794,GO:0051273,GO:0051274,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1901576,GO:2000112 - 2.766e-197 628.0
BYD3_k127_7713812_2 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K10111,K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 518.0
BYD3_k127_7713812_3 Binding-protein-dependent transport system inner membrane component K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006438 494.0
BYD3_k127_7713812_4 Binding-protein-dependent transport system inner membrane component K02026,K17323 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 469.0
BYD3_k127_7713812_5 regulatory protein GntR HTH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008664 361.0
BYD3_k127_7713812_6 Shikimate dehydrogenase substrate binding domain protein K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 360.0
BYD3_k127_7713812_7 Protein of unknown function (DUF229) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006111 361.0
BYD3_k127_7713812_8 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001156 258.0
BYD3_k127_7723088_0 MMPL family - - - 7.76e-255 811.0
BYD3_k127_7723088_1 polysaccharide deacetylase K01452 - 3.5.1.41 0.00000000000000000000000000000000131 132.0
BYD3_k127_7723088_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000002521 80.0
BYD3_k127_773835_0 His Kinase A (phosphoacceptor) domain - - - 5.415e-205 662.0
BYD3_k127_773835_1 TonB dependent receptor K02014,K16089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 577.0
BYD3_k127_773835_2 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 546.0
BYD3_k127_773835_3 B12 binding domain K22491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 359.0
BYD3_k127_773835_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002918 261.0
BYD3_k127_773835_5 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001982 254.0
BYD3_k127_773835_6 Beta-Ig-H3 fasciclin - - - 0.00000000000000000000000000000000000000000000000000000000001458 211.0
BYD3_k127_773835_7 Histidine phosphatase superfamily (branch 1) - - - 0.00000000000000000000000000000000000003801 151.0
BYD3_k127_773835_8 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000000001119 134.0
BYD3_k127_7743930_0 Major facilitator Superfamily K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008839 353.0
BYD3_k127_7743930_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000009868 187.0
BYD3_k127_7743930_2 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000006424 162.0
BYD3_k127_7743930_3 - - - - 0.000000000000000000000000000000000002091 142.0
BYD3_k127_7743930_4 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000007941 101.0
BYD3_k127_7750848_0 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 579.0
BYD3_k127_7750848_1 Sulphur transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 503.0
BYD3_k127_7750848_2 GTP cyclohydrolase K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000869 411.0
BYD3_k127_7750848_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 391.0
BYD3_k127_7750848_4 Domain of unknown function (DUF4390) - - - 0.000000000000000000000000000000000000000000000000000000000000000000505 235.0
BYD3_k127_7750848_5 Sensors of blue-light using FAD - - - 0.0000000000000000000000000000000000000000000000000000000003573 205.0
BYD3_k127_7750848_6 Haem-degrading - - - 0.00000000000000000000000000000000000000000000000000002262 193.0
BYD3_k127_7750848_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000009667 176.0
BYD3_k127_7750848_8 Histidine kinase - - - 0.00000000000000000000000000000000000000000002506 164.0
BYD3_k127_7755875_0 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 6.189e-277 881.0
BYD3_k127_7755875_1 PFAM AMP-dependent synthetase and ligase K02182 - 6.2.1.48 1.091e-241 761.0
BYD3_k127_7755875_2 NADH:flavin oxidoreductase / NADH oxidase family K00219,K09461 - 1.14.13.40,1.3.1.34 3.445e-227 707.0
BYD3_k127_7755875_3 PFAM Extracellular ligand-binding receptor - - - 7.365e-201 631.0
BYD3_k127_7755875_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 526.0
BYD3_k127_7755875_5 PFAM ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008744 375.0
BYD3_k127_7755875_6 PFAM NADH flavin oxidoreductase NADH oxidase K00219,K09461 - 1.14.13.40,1.3.1.34 0.00000000000000000000000000000000000000000000000000000000001163 207.0
BYD3_k127_7755875_7 PFAM aromatic-ring-hydroxylating dioxygenase beta subunit - - - 0.000000000000000000000000000000000005563 139.0
BYD3_k127_7761640_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.0 1106.0
BYD3_k127_7761640_1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 4.436e-242 758.0
BYD3_k127_7761640_10 pilus assembly K02676 - - 0.000000000000000000000000000000000000000000000000000000002945 201.0
BYD3_k127_7761640_11 - - - - 0.0000000000000000000000000000000000000002356 164.0
BYD3_k127_7761640_12 - - - - 0.000000000000000000000000000000000008335 141.0
BYD3_k127_7761640_13 Protein of unknown function (DUF1353) - - - 0.000000000007684 74.0
BYD3_k127_7761640_14 - - - - 0.00000000006736 65.0
BYD3_k127_7761640_15 OsmC-like protein K06889,K07397 - - 0.000007822 48.0
BYD3_k127_7761640_2 Alcohol dehydrogenase GroES-like domain K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 451.0
BYD3_k127_7761640_3 Involved in chromosome partitioning - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 363.0
BYD3_k127_7761640_4 KR domain K00034,K00046,K00059,K00216 - 1.1.1.100,1.1.1.47,1.1.1.69,1.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 331.0
BYD3_k127_7761640_5 PFAM Uracil-DNA glycosylase superfamily K10800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 329.0
BYD3_k127_7761640_6 ChrR Cupin-like domain K05913 - 1.13.11.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 306.0
BYD3_k127_7761640_7 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 297.0
BYD3_k127_7761640_8 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002816 223.0
BYD3_k127_7769117_0 heavy metal translocating P-type ATPase K01533 - 3.6.3.4 1.551e-242 769.0
BYD3_k127_7769117_1 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006994 572.0
BYD3_k127_7769117_2 HlyD family secretion protein K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002221 246.0
BYD3_k127_7769117_3 PFAM Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000003473 207.0
BYD3_k127_7769117_4 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000008184 159.0
BYD3_k127_7769117_5 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000003009 160.0
BYD3_k127_7769117_6 Heavy-metal-associated domain K07213 - - 0.0000000000000000002228 90.0
BYD3_k127_7769117_7 TIGRFAM cytochrome oxidase maturation protein, cbb3-type - - - 0.0000000000007326 72.0
BYD3_k127_7769117_8 Uncharacterized conserved protein (DUF2249) - - - 0.00000000005579 69.0
BYD3_k127_7791724_0 Tetratricopeptide repeat - - - 2.324e-215 696.0
BYD3_k127_7791724_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004588 479.0
BYD3_k127_7791724_2 Clostripain family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 456.0
BYD3_k127_7791724_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000001507 235.0
BYD3_k127_7796436_0 Belongs to the arginase family K01476,K01480,K12255,K18459 - 3.5.3.1,3.5.3.11,3.5.3.17,3.5.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 528.0
BYD3_k127_7796436_1 FAD dependent oxidoreductase K19746 - 1.4.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 461.0
BYD3_k127_7796436_2 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 406.0
BYD3_k127_7796436_3 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 356.0
BYD3_k127_7796436_4 Methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000003364 220.0
BYD3_k127_7799028_0 Extracellular ligand-binding receptor K01999 - - 1.31e-212 669.0
BYD3_k127_7799028_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 479.0
BYD3_k127_7799028_2 abc transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 400.0
BYD3_k127_7799028_3 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007006 393.0
BYD3_k127_7799028_4 PFAM Fibronectin type III domain protein K05973 - 3.1.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 369.0
BYD3_k127_7799028_5 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000003434 130.0
BYD3_k127_7820117_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1172.0
BYD3_k127_7820117_1 PFAM 20S proteasome, A and B subunits K07395 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 460.0
BYD3_k127_7820117_10 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000007049 100.0
BYD3_k127_7820117_2 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005034 459.0
BYD3_k127_7820117_3 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009231 416.0
BYD3_k127_7820117_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 424.0
BYD3_k127_7820117_5 helix_turn_helix gluconate operon transcriptional repressor K00375 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 314.0
BYD3_k127_7820117_6 Extracellular liganD-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006509 292.0
BYD3_k127_7820117_7 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004166 267.0
BYD3_k127_7820117_8 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000002607 252.0
BYD3_k127_7820117_9 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07661 - - 0.0000000000000000000000000000003221 133.0
BYD3_k127_7823875_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 5.675e-272 847.0
BYD3_k127_7823875_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 7.747e-208 660.0
BYD3_k127_7823875_10 Sporulation related domain - - - 0.0000000000000000000000000000000000000000000000000000000000132 221.0
BYD3_k127_7823875_11 Predicted membrane protein (DUF2214) K08983 - - 0.000000000000000000000000000002157 132.0
BYD3_k127_7823875_2 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 632.0
BYD3_k127_7823875_3 Belongs to the methyltransferase superfamily K07444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 544.0
BYD3_k127_7823875_4 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 529.0
BYD3_k127_7823875_5 ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 420.0
BYD3_k127_7823875_6 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 402.0
BYD3_k127_7823875_7 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 330.0
BYD3_k127_7823875_8 Thiol disulfide interchange protein K03673 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 296.0
BYD3_k127_7823875_9 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.000000000000000000000000000000000000000000000000000000000000000000002297 241.0
BYD3_k127_7847220_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 2.852e-211 661.0
BYD3_k127_7847220_1 Signal peptide protein - - - 0.0000000000000000000000000000000000002071 146.0
BYD3_k127_7847220_2 Signal peptide protein - - - 0.0000000000000000000000000000000000003011 147.0
BYD3_k127_7847220_3 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.000000000000000000000004429 102.0
BYD3_k127_7848988_0 basic membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 552.0
BYD3_k127_7848988_1 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 496.0
BYD3_k127_7848988_2 Phytanoyl-CoA dioxygenase (PhyH) K00477 - 1.14.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 395.0
BYD3_k127_7848988_3 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000001673 138.0
BYD3_k127_7848988_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000001254 65.0
BYD3_k127_7852661_0 Putative amidoligase enzyme (DUF2126) - - - 0.0 1933.0
BYD3_k127_7852661_1 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0 1161.0
BYD3_k127_7852661_2 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 560.0
BYD3_k127_7852661_3 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000008717 191.0
BYD3_k127_7852688_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1076.0
BYD3_k127_7852688_1 Flagellar hook protein FlgE K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 588.0
BYD3_k127_7852688_10 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 370.0
BYD3_k127_7852688_11 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000292 292.0
BYD3_k127_7852688_12 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007472 268.0
BYD3_k127_7852688_13 bacterial-type flagellum organization K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000006812 236.0
BYD3_k127_7852688_14 Belongs to the flagella basal body rod proteins family K02388 - - 0.00000000000000000000000000000000000000000000000000000000000005372 215.0
BYD3_k127_7852688_15 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.000000000000000000000000000000000000000000000000000000000003848 216.0
BYD3_k127_7852688_16 Flagellar basal body rod protein FlgB-like - - - 0.00000000000000000000000000000000000000000000000000006323 196.0
BYD3_k127_7852688_17 - - - - 0.0000000000000000003021 89.0
BYD3_k127_7852688_18 anti-sigma-28 factor K02398 - - 0.0000000006438 64.0
BYD3_k127_7852688_2 GTP-binding signal recognition particle K02404 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 545.0
BYD3_k127_7852688_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 498.0
BYD3_k127_7852688_4 JmjC domain, hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 494.0
BYD3_k127_7852688_5 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008011 478.0
BYD3_k127_7852688_6 flagellar basal-body rod protein K02392 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 438.0
BYD3_k127_7852688_7 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005158 428.0
BYD3_k127_7852688_8 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008235 389.0
BYD3_k127_7852688_9 Flagellar basal-body rod protein FlgF K02391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 377.0
BYD3_k127_7856689_0 ATP-binding region, ATPase domain protein - - - 7.929e-241 765.0
BYD3_k127_7856689_1 Nitronate monooxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 582.0
BYD3_k127_7856689_2 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101 - 1.13.11.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 439.0
BYD3_k127_7856689_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000708 282.0
BYD3_k127_7856689_4 Regulator K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003278 282.0
BYD3_k127_7856689_5 Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - 0.00000000000000000000000000000000000000000000000000001382 197.0
BYD3_k127_7856689_6 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04100 - 1.13.11.8 0.00000000000000000000000000000000000000000000000000004743 189.0
BYD3_k127_787677_0 Metallo-beta-lactamase superfamily - - - 8.442e-213 675.0
BYD3_k127_787677_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 9.211e-210 664.0
BYD3_k127_787677_2 FAD binding domain K00480,K22270 - 1.14.13.1,1.14.13.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 587.0
BYD3_k127_787677_3 CoA-transferase family III K01796 - 5.1.99.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 552.0
BYD3_k127_787677_4 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005691 501.0
BYD3_k127_787677_5 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008345 452.0
BYD3_k127_787677_6 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991 323.0
BYD3_k127_787677_7 Gentisate 1,2-dioxygenase K00450 - 1.13.11.4 0.000000000000000000000000000000000000000000000000000000000000000000004572 245.0
BYD3_k127_787677_8 Required for insertion of 4Fe-4S clusters K15724 - - 0.0000000000000000000000000000000000000000000021 164.0
BYD3_k127_787677_9 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000004613 108.0
BYD3_k127_7906233_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.0 1159.0
BYD3_k127_7906233_1 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 520.0
BYD3_k127_7906233_2 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000076 476.0
BYD3_k127_7906233_3 peptidase S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 411.0
BYD3_k127_7906233_4 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 361.0
BYD3_k127_7906233_5 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 320.0
BYD3_k127_7906233_6 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000000000000000000000245 184.0
BYD3_k127_7906233_7 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000001257 179.0
BYD3_k127_7906233_8 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000001775 51.0
BYD3_k127_7920646_0 TAP-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 505.0
BYD3_k127_7920646_1 ABC-2 family transporter protein K09696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005581 487.0
BYD3_k127_7920646_2 Autoinducer binding domain K07782 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 356.0
BYD3_k127_7920646_3 ATPases associated with a variety of cellular activities K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 342.0
BYD3_k127_7920646_4 HlyD family secretion protein K13408 - - 0.000000000000000000000000000000000000000000003414 170.0
BYD3_k127_7922695_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 5.494e-242 753.0
BYD3_k127_7922695_1 D-amino acid K00285 - 1.4.5.1 1.178e-205 653.0
BYD3_k127_7922695_10 Uncharacterised protein family (UPF0149) K07039 - - 0.000000000000000000000000000000000000000000000000000000000000000000008876 242.0
BYD3_k127_7922695_11 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000005491 213.0
BYD3_k127_7922695_12 Acetyltransferase (GNAT) domain K03825 - - 0.00000000000000000000000000000000000000000000000000017 195.0
BYD3_k127_7922695_13 Redoxin domain protein - - - 0.00000000000000000000000000000000000000000001499 168.0
BYD3_k127_7922695_14 - - - - 0.000000000000000000004543 99.0
BYD3_k127_7922695_2 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006124 606.0
BYD3_k127_7922695_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 602.0
BYD3_k127_7922695_4 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 562.0
BYD3_k127_7922695_5 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 498.0
BYD3_k127_7922695_6 NlpB/DapX lipoprotein K07287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006839 459.0
BYD3_k127_7922695_7 SMART transcription factor jumonji jmjC K18850 - 1.14.11.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009638 436.0
BYD3_k127_7922695_8 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000001053 257.0
BYD3_k127_7922695_9 peptidylprolyl isomerase K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000158 250.0
BYD3_k127_7927917_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 2.44e-299 946.0
BYD3_k127_7927917_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 543.0
BYD3_k127_7927917_10 Sulphur oxidation protein SoxZ K17227 - - 0.00000000000000000000000000000000000000000002767 162.0
BYD3_k127_7927917_11 VanZ like family - - - 0.00000000000000000000000000000000000000135 166.0
BYD3_k127_7927917_2 PFAM Phospholipase D Transphosphatidylase K06132 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000732 516.0
BYD3_k127_7927917_3 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006218 309.0
BYD3_k127_7927917_4 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001116 294.0
BYD3_k127_7927917_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001226 245.0
BYD3_k127_7927917_6 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000001502 204.0
BYD3_k127_7927917_7 Sulfur oxidation protein SoxY K17226 - - 0.0000000000000000000000000000000000000000000002392 171.0
BYD3_k127_7927917_8 Cytochrome c K17223 - - 0.000000000000000000000000000000000000000000001007 169.0
BYD3_k127_7927917_9 Protein of unknown function (DUF1810) - - - 0.00000000000000000000000000000000000000000000405 168.0
BYD3_k127_7929336_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 6.106e-268 864.0
BYD3_k127_7929336_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 7.141e-219 682.0
BYD3_k127_7929336_2 HDOD domain K08282 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 621.0
BYD3_k127_7929336_3 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 549.0
BYD3_k127_7929336_4 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 499.0
BYD3_k127_7929336_5 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000000000000007372 212.0
BYD3_k127_7929932_0 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases - - - 6.654e-194 617.0
BYD3_k127_7929932_1 4-hydroxybenzoate 3-monooxygenase K00481 - 1.14.13.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 579.0
BYD3_k127_7929932_2 Saccharopine dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 519.0
BYD3_k127_7929932_3 PFAM Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 496.0
BYD3_k127_7929932_4 Domain of unknown function (DUF3391) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 500.0
BYD3_k127_7929932_5 helix_turn_helix, arabinose operon control protein K18954 - - 0.000000000000000000000000000000000000000000000000000000000000000001699 237.0
BYD3_k127_7929932_6 AsnC family - - - 0.0000000000000000000000000000000000000000000000000002241 188.0
BYD3_k127_7929932_7 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000000000000000849 178.0
BYD3_k127_7929932_8 Cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.000002557 51.0
BYD3_k127_793437_0 Amidohydrolase family - - - 2.812e-239 754.0
BYD3_k127_793437_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 582.0
BYD3_k127_793437_10 Belongs to the UPF0337 (CsbD) family - - - 0.00000000000000000000000000000000005217 134.0
BYD3_k127_793437_11 - - - - 0.000000000000000000000000000426 116.0
BYD3_k127_793437_2 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 472.0
BYD3_k127_793437_3 Virulence factor BrkB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 408.0
BYD3_k127_793437_4 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 377.0
BYD3_k127_793437_5 cell septum assembly - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344 343.0
BYD3_k127_793437_6 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005147 299.0
BYD3_k127_793437_7 Glyoxalase-like domain K08234 - - 0.00000000000000000000000000000000000000000000000000000000001462 209.0
BYD3_k127_793437_8 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000002586 202.0
BYD3_k127_793437_9 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000001861 176.0
BYD3_k127_7941558_0 histidine kinase, dimerisation and phosphoacceptor region K07673 - 2.7.13.3 9.742e-201 651.0
BYD3_k127_7941558_1 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 511.0
BYD3_k127_7941558_2 Major Facilitator Superfamily K02575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 498.0
BYD3_k127_7941558_3 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 433.0
BYD3_k127_7941558_4 response regulator, receiver K07684 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001259 282.0
BYD3_k127_7941558_5 OsmC-like protein - - - 0.00000000000000000000000000000000000004214 149.0
BYD3_k127_7941558_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000001252 138.0
BYD3_k127_7941558_7 AMP binding - - - 0.000000000000000000000009578 115.0
BYD3_k127_7941558_8 - - - - 0.0000000000000000000005414 102.0
BYD3_k127_7950615_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1204.0
BYD3_k127_7950615_1 Belongs to the thiolase family K00632 - 2.3.1.16 1.211e-201 635.0
BYD3_k127_7950615_2 fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 500.0
BYD3_k127_7950615_3 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003583 393.0
BYD3_k127_7950615_4 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000001898 269.0
BYD3_k127_7950615_5 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000002063 194.0
BYD3_k127_7953004_0 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 343.0
BYD3_k127_7953004_1 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003077 325.0
BYD3_k127_7953004_2 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000963 272.0
BYD3_k127_7953004_3 translation initiation inhibitor, yjgF family - - - 0.0000000000000000000000000000000000000000000000000981 183.0
BYD3_k127_7961910_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 0.0 1083.0
BYD3_k127_7961910_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 8.537e-258 804.0
BYD3_k127_7961910_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 3.078e-218 687.0
BYD3_k127_7961910_3 Nudix hydrolase K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000008575 246.0
BYD3_k127_7961910_4 Protein of unknown function (DUF1178) - - - 0.0000000000000000000000000000000000000000000000000000000000002116 214.0
BYD3_k127_7961910_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000000000000001553 175.0
BYD3_k127_7961910_6 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000001579 153.0
BYD3_k127_7962527_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 1.741e-249 777.0
BYD3_k127_7962527_1 Glutathione S-transferase K03599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 404.0
BYD3_k127_7962527_2 Cytochrome C1 K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 376.0
BYD3_k127_7962527_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008439 342.0
BYD3_k127_7962527_4 Protein of unknown function (DUF1631) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009723 315.0
BYD3_k127_7962527_5 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000000000000000000000000000000002057 228.0
BYD3_k127_7962527_6 Starvation protein B K03600 - - 0.0000000000000000000000000000000000000000000000000000000000000006587 235.0
BYD3_k127_7976411_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 1e-322 1007.0
BYD3_k127_7976411_1 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 315.0
BYD3_k127_7976411_2 Bacterial transcriptional repressor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003384 278.0
BYD3_k127_7976411_3 Poly(hydroxyalcanoate) granule associated protein (phasin) - - - 0.0000000000000000002145 94.0
BYD3_k127_7977362_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 GO:0000003,GO:0001655,GO:0001822,GO:0001889,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004457,GO:0004611,GO:0004613,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006109,GO:0006111,GO:0006113,GO:0006139,GO:0006163,GO:0006464,GO:0006629,GO:0006631,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007028,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007610,GO:0008150,GO:0008152,GO:0008906,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009179,GO:0009185,GO:0009199,GO:0009205,GO:0009259,GO:0009410,GO:0009605,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010646,GO:0010647,GO:0010675,GO:0010906,GO:0014070,GO:0014074,GO:0015036,GO:0015980,GO:0016042,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016651,GO:0016667,GO:0016668,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018991,GO:0019098,GO:0019222,GO:0019249,GO:0019318,GO:0019319,GO:0019320,GO:0019362,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019516,GO:0019538,GO:0019541,GO:0019543,GO:0019563,GO:0019626,GO:0019637,GO:0019659,GO:0019660,GO:0019661,GO:0019666,GO:0019674,GO:0019693,GO:0019751,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023056,GO:0030145,GO:0030154,GO:0030703,GO:0030855,GO:0031323,GO:0031667,GO:0031960,GO:0031974,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032868,GO:0032869,GO:0032870,GO:0033993,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035690,GO:0036211,GO:0042221,GO:0042493,GO:0042594,GO:0042737,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043434,GO:0043436,GO:0043687,GO:0043900,GO:0043903,GO:0043949,GO:0043950,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045471,GO:0046031,GO:0046034,GO:0046164,GO:0046174,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0046434,GO:0046459,GO:0046483,GO:0046496,GO:0046677,GO:0046683,GO:0046700,GO:0046872,GO:0046914,GO:0047134,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048545,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051186,GO:0051384,GO:0051591,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0060429,GO:0061005,GO:0061008,GO:0062012,GO:0065007,GO:0070013,GO:0070365,GO:0070887,GO:0071236,GO:0071310,GO:0071361,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071548,GO:0071549,GO:0071704,GO:0071840,GO:0072001,GO:0072071,GO:0072329,GO:0072330,GO:0072521,GO:0072524,GO:0080090,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533 4.1.1.32 0.0 1060.0
BYD3_k127_7977362_1 methylmalonate-semialdehyde dehydrogenase K00140 - 1.2.1.18,1.2.1.27 1.639e-285 882.0
BYD3_k127_7977362_2 Cro/C1-type HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 404.0
BYD3_k127_7977362_3 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 365.0
BYD3_k127_7977362_4 Universal stress protein family - - - 0.000000000000000000005589 99.0
BYD3_k127_7977362_5 Amidohydrolase K01686 - 4.2.1.8 0.0000000000000002768 83.0
BYD3_k127_7978433_0 PFAM sigma-54 factor interaction domain-containing protein - - - 8.473e-206 652.0
BYD3_k127_7978433_1 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 498.0
BYD3_k127_7978433_2 6-phosphogluconate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 412.0
BYD3_k127_7978433_3 FCD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 354.0
BYD3_k127_7978433_4 lytic transglycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 310.0
BYD3_k127_8001842_0 - - - - 3.752e-215 694.0
BYD3_k127_8001842_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 368.0
BYD3_k127_8001842_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007294 249.0
BYD3_k127_8001842_3 - - - - 0.000000000000000000000000000000000000000000000002134 185.0
BYD3_k127_8001842_4 NADPH-dependent FMN reductase K19784 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006805,GO:0008150,GO:0008152,GO:0009410,GO:0009987,GO:0010181,GO:0016491,GO:0016645,GO:0016646,GO:0032553,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0050896,GO:0051716,GO:0052873,GO:0055114,GO:0070887,GO:0071466,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000001974 134.0
BYD3_k127_8001842_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000008983 96.0
BYD3_k127_8004240_0 Belongs to the sigma-70 factor family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 494.0
BYD3_k127_8004240_1 WYL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 398.0
BYD3_k127_8004240_10 YCII-related domain - - - 0.00000000000000000000000000000000000000000007217 164.0
BYD3_k127_8004240_11 SnoaL-like domain - - - 0.000000000005718 66.0
BYD3_k127_8004240_2 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 411.0
BYD3_k127_8004240_3 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004721 330.0
BYD3_k127_8004240_4 Pfam:Pyridox_oxidase K07006 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005349 331.0
BYD3_k127_8004240_5 - - - - 0.000000000000000000000000000000000000000000000000000000000002057 218.0
BYD3_k127_8004240_6 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000000000000000000000000000002687 218.0
BYD3_k127_8004240_7 NIPSNAP - - - 0.000000000000000000000000000000000000000000000000000008541 198.0
BYD3_k127_8004240_8 BON domain - - - 0.000000000000000000000000000000000000000000000001241 181.0
BYD3_k127_8004240_9 LysE type translocator - - - 0.000000000000000000000000000000000000000000000112 175.0
BYD3_k127_8006564_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K02021,K11085 - - 2.304e-242 762.0
BYD3_k127_8006564_1 Involved in the TonB-independent uptake of proteins K03641 - - 4.573e-207 653.0
BYD3_k127_8006564_2 Domain of Unknown Function (DUF748) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003683 533.0
BYD3_k127_8006564_3 KR domain K21883 - 1.1.1.401 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 384.0
BYD3_k127_8006564_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 335.0
BYD3_k127_8014552_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008711 391.0
BYD3_k127_8014552_1 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000000000000000000000000000000000000000000000000000000000000000000174 233.0
BYD3_k127_8014552_2 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001027 234.0
BYD3_k127_8014552_3 Lipocalin-like domain - - - 0.00000000000000000000000000000000000002949 148.0
BYD3_k127_8014552_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000001572 151.0
BYD3_k127_8014552_5 ABC transporter substrate binding protein K01989 - - 0.000000000000003941 78.0
BYD3_k127_8023177_0 Amidohydrolase family K01465 - 3.5.2.3 3.717e-219 689.0
BYD3_k127_8023177_1 Fumarylacetoacetate (FAA) hydrolase family K02509,K18364 - 4.2.1.132,4.2.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 446.0
BYD3_k127_8023177_2 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003361 263.0
BYD3_k127_8023177_3 5-carboxymethyl-2-hydroxymuconate isomerase K01826 - 5.3.3.10 0.0000000000000000000000000000000000003364 142.0
BYD3_k127_8023177_4 Acyltransferase family - - - 0.0000000000000000000000002713 112.0
BYD3_k127_8027965_0 AAA ATPase domain - - - 8.042e-277 923.0
BYD3_k127_8027965_1 TonB-dependent Receptor Plug Domain K02014 - - 3.359e-205 660.0
BYD3_k127_8027965_2 Ferredoxin--NADP reductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 552.0
BYD3_k127_8027965_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002457 282.0
BYD3_k127_8027965_4 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000009719 166.0
BYD3_k127_8027965_5 Pfam Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000001608 137.0
BYD3_k127_8027965_6 - - - - 0.0000000000005771 73.0
BYD3_k127_8029862_0 Belongs to the IlvD Edd family K01687,K13875 - 4.2.1.25,4.2.1.9 6.378e-220 687.0
BYD3_k127_8029862_1 PFAM Peptidoglycan-binding domain 1 protein K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 603.0
BYD3_k127_8029862_2 Dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000002517 266.0
BYD3_k127_8029862_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000107 217.0
BYD3_k127_8029862_4 Demethylmenaquinone methyltransferase - - - 0.0000000000000000002544 88.0
BYD3_k127_8046013_0 Fatty acid desaturase K00496 GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016491,GO:0016705,GO:0016713,GO:0018685,GO:0043446,GO:0043448,GO:0044237,GO:0044248,GO:0055114,GO:0071704,GO:1901575 1.14.15.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 505.0
BYD3_k127_8046013_1 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 378.0
BYD3_k127_8046013_2 Pilin (bacterial filament) K02650 - - 0.000000000000000000000000000000000000000004732 159.0
BYD3_k127_8046013_3 small integral membrane protein - - - 0.00000000000000000000000005412 108.0
BYD3_k127_8076892_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.491e-316 981.0
BYD3_k127_8076892_1 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005606 602.0
BYD3_k127_8076892_2 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 371.0
BYD3_k127_8076892_3 subfamily IA, variant 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001015 271.0
BYD3_k127_8076892_4 subfamily IA, variant 1 K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000207 245.0
BYD3_k127_8076892_5 PFAM MmgE PrpD family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000008365 228.0
BYD3_k127_8076892_6 Phosphoribulokinase K00855 - 2.7.1.19 0.00000000000000000000000000000000000000000004641 160.0
BYD3_k127_8080030_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 5.917e-265 827.0
BYD3_k127_8080030_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 GO:0003674,GO:0003824,GO:0004362,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009055,GO:0009636,GO:0009987,GO:0015036,GO:0015037,GO:0015038,GO:0015949,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0022900,GO:0031974,GO:0033554,GO:0034599,GO:0034641,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0055114,GO:0070013,GO:0070887,GO:0071704,GO:0097237,GO:0098754,GO:0098869,GO:1901360,GO:1990748 1.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008023 484.0
BYD3_k127_8080030_2 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 393.0
BYD3_k127_8106879_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006933 512.0
BYD3_k127_8106879_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K00019 GO:0000003,GO:0000166,GO:0001568,GO:0001676,GO:0001944,GO:0003674,GO:0003824,GO:0004888,GO:0004930,GO:0004953,GO:0004954,GO:0004955,GO:0004957,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006690,GO:0006692,GO:0006693,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0007186,GO:0007275,GO:0007276,GO:0007292,GO:0007565,GO:0007567,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009653,GO:0009719,GO:0009987,GO:0010033,GO:0016053,GO:0016404,GO:0016491,GO:0016614,GO:0016616,GO:0019372,GO:0019752,GO:0019953,GO:0022414,GO:0023052,GO:0030728,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0033559,GO:0035239,GO:0035295,GO:0036094,GO:0038023,GO:0042221,GO:0042759,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0045786,GO:0046394,GO:0046456,GO:0046983,GO:0048037,GO:0048514,GO:0048519,GO:0048523,GO:0048609,GO:0048731,GO:0048844,GO:0048856,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051287,GO:0051704,GO:0051716,GO:0051726,GO:0055114,GO:0060089,GO:0060840,GO:0065007,GO:0070013,GO:0070403,GO:0070493,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071559,GO:0071560,GO:0071704,GO:0072330,GO:0072358,GO:0072359,GO:0097070,GO:0097159,GO:1901265,GO:1901363,GO:1901568,GO:1901570,GO:1901576,GO:2001300,GO:2001301 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 405.0
BYD3_k127_8106879_2 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 368.0
BYD3_k127_8106879_3 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 353.0
BYD3_k127_8106879_4 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001477 229.0
BYD3_k127_8106879_5 FMN reductase (NADPH) activity K03809 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000001458 224.0
BYD3_k127_8106879_6 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000002566 181.0
BYD3_k127_8106879_7 Patatin phospholipase K07001 - - 0.00000000000000000000000000000000000000000001283 181.0
BYD3_k127_8126034_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 4.987e-281 896.0
BYD3_k127_8126034_1 PFAM Short-chain dehydrogenase reductase SDR K00059,K00076 - 1.1.1.100,1.1.1.159 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 449.0
BYD3_k127_8126034_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000003358 129.0
BYD3_k127_8126034_3 - - - - 0.00000000000005811 79.0
BYD3_k127_8126034_4 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000001636 70.0
BYD3_k127_8146987_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1488.0
BYD3_k127_8146987_1 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 312.0
BYD3_k127_8146987_2 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005039 256.0
BYD3_k127_8146987_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000003542 216.0
BYD3_k127_8146987_4 Cytochrome P460 - - - 0.0000000000000000000000000131 122.0
BYD3_k127_8146987_5 Cytochrome c - - - 0.0000000000000001139 92.0
BYD3_k127_8146987_6 - - - - 0.0000000000000001423 85.0
BYD3_k127_8146987_7 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000003635 83.0
BYD3_k127_8160383_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K22015 - 1.17.1.9,1.17.99.7 0.0 1510.0
BYD3_k127_8160383_1 4Fe-4S dicluster domain - - - 0.0 1091.0
BYD3_k127_8160383_2 PBP superfamily domain K07219 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 521.0
BYD3_k127_8160383_3 Nitrate reductase delta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005213 314.0
BYD3_k127_8160383_4 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 306.0
BYD3_k127_8160383_5 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007525 273.0
BYD3_k127_8160383_6 Protein of unknown function (DUF3305) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001449 233.0
BYD3_k127_8160383_7 Protein of unknown function (DUF3306) - - - 0.0000000000000000000000000000000008658 142.0
BYD3_k127_8160383_8 - - - - 0.00000000002077 66.0
BYD3_k127_8187567_0 ABC transporter K06147 - - 4.067e-295 920.0
BYD3_k127_8187567_1 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 1.771e-225 719.0
BYD3_k127_8187567_10 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008144 449.0
BYD3_k127_8187567_11 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 450.0
BYD3_k127_8187567_12 Eukaryotic-type carbonic anhydrase K01674 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 394.0
BYD3_k127_8187567_13 Enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003738 396.0
BYD3_k127_8187567_14 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 372.0
BYD3_k127_8187567_15 Short-chain dehydrogenase reductase (SDR) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 337.0
BYD3_k127_8187567_16 Dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002672 274.0
BYD3_k127_8187567_17 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002911 274.0
BYD3_k127_8187567_18 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000573 225.0
BYD3_k127_8187567_19 Thioesterase superfamily K10806 - - 0.00000000000000000000000000000000000000000000000000000000000002304 219.0
BYD3_k127_8187567_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 609.0
BYD3_k127_8187567_20 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000000000000000000000000001073 213.0
BYD3_k127_8187567_21 NYN domain - - - 0.000000000000000000000000000000000000000000000000000000000006342 229.0
BYD3_k127_8187567_23 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.000000000000000000001456 97.0
BYD3_k127_8187567_24 RES - - - 0.0000000000004767 79.0
BYD3_k127_8187567_3 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 575.0
BYD3_k127_8187567_4 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 561.0
BYD3_k127_8187567_5 Belongs to the ABC transporter superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 544.0
BYD3_k127_8187567_6 Belongs to the ABC transporter superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 522.0
BYD3_k127_8187567_7 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 507.0
BYD3_k127_8187567_8 TIGRFAM Drug resistance transporter Bcr CflA subfamily K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 498.0
BYD3_k127_8187567_9 KR domain K13775 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 462.0
BYD3_k127_8197000_0 benzoyl-CoA oxygenase K15512 - 1.14.13.208 5.56e-291 913.0
BYD3_k127_8197000_1 PFAM Enoyl-CoA hydratase isomerase K15513 - 4.1.2.44 1.468e-287 889.0
BYD3_k127_8197000_2 Oxidoreductase NAD-binding domain K00528,K02641,K15511 - 1.14.13.208,1.18.1.2,1.19.1.1 3.173e-217 679.0
BYD3_k127_8197000_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K15546 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 445.0
BYD3_k127_8197000_4 Benzoate-CoA ligase family K04110 - 6.2.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 420.0
BYD3_k127_8197000_5 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 402.0
BYD3_k127_8200514_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1147.0
BYD3_k127_8200514_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 6e-323 1002.0
BYD3_k127_8200514_10 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008823 432.0
BYD3_k127_8200514_11 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 436.0
BYD3_k127_8200514_12 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 419.0
BYD3_k127_8200514_13 Class II aldolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006244 375.0
BYD3_k127_8200514_14 Cyclic nucleotide-monophosphate binding domain K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 357.0
BYD3_k127_8200514_15 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 334.0
BYD3_k127_8200514_16 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 346.0
BYD3_k127_8200514_17 UPF0114 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 292.0
BYD3_k127_8200514_18 - - - - 0.000000000000000000000000000000000000000000000000000000001165 210.0
BYD3_k127_8200514_19 Prokaryotic N-terminal methylation motif K02655 - - 0.00000000000000000000000000000000000000003074 157.0
BYD3_k127_8200514_2 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 1.61e-291 906.0
BYD3_k127_8200514_20 Cytochrome c K08738 - - 0.0000000000000000000000000000000000003235 143.0
BYD3_k127_8200514_21 - - - - 0.0000000000000000000002275 102.0
BYD3_k127_8200514_22 Tfp pilus assembly protein FimV - - - 0.000000000000000216 86.0
BYD3_k127_8200514_3 acyl-CoA dehydrogenase K00249 - 1.3.8.7 4.021e-226 711.0
BYD3_k127_8200514_4 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 5.24e-200 633.0
BYD3_k127_8200514_5 Aminoglycoside phosphotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 571.0
BYD3_k127_8200514_6 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 540.0
BYD3_k127_8200514_7 associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009452 520.0
BYD3_k127_8200514_8 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005598 476.0
BYD3_k127_8200514_9 histone deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 482.0
BYD3_k127_8205209_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2575.0
BYD3_k127_8205209_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1120.0
BYD3_k127_8205209_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 293.0
BYD3_k127_8205209_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003483 241.0
BYD3_k127_8205209_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.00000000000000000000000000002612 116.0
BYD3_k127_8205209_5 PIN domain - - - 0.0000000000000000000000000002055 121.0
BYD3_k127_8217913_0 Sulfate transporter K03321 - - 2.899e-238 750.0
BYD3_k127_8217913_1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 1.294e-212 689.0
BYD3_k127_8217913_2 Proton-conducting membrane transporter K12141 - - 4.515e-200 625.0
BYD3_k127_8217913_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005905 406.0
BYD3_k127_8217913_4 ATPase, AAA superfamily K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 403.0
BYD3_k127_8217913_5 PFAM band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 323.0
BYD3_k127_8217913_6 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008585 274.0
BYD3_k127_8217913_7 Protein of unknown function (DUF3460) - - - 0.000000000000000000000009703 103.0
BYD3_k127_8246322_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 1.066e-315 971.0
BYD3_k127_8246322_1 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 1.04e-289 895.0
BYD3_k127_8246322_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 1.608e-264 820.0
BYD3_k127_8246322_3 Ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007504 421.0
BYD3_k127_8246322_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001883 291.0
BYD3_k127_8246322_5 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000281 275.0
BYD3_k127_8246322_6 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.000000000000000000000000005582 110.0
BYD3_k127_8258106_0 Belongs to the IlvD Edd family K13875 - 4.2.1.25 0.0 1008.0
BYD3_k127_8258106_1 MatE - - - 5.115e-244 760.0
BYD3_k127_8258106_2 SMP-30/Gluconolaconase/LRE-like region K14274 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 410.0
BYD3_k127_8258106_3 2-keto-3-deoxy-galactonokinase K00883 GO:0003674,GO:0003824,GO:0005975,GO:0006082,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008671,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019520,GO:0019583,GO:0019584,GO:0019752,GO:0032787,GO:0034192,GO:0034194,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046395,GO:0046835,GO:0071704,GO:0072329,GO:1901575 2.7.1.58 0.0000000000000000000001925 108.0
BYD3_k127_8292554_0 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 1.105e-217 704.0
BYD3_k127_8292554_1 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005647 432.0
BYD3_k127_8292554_2 Protein conserved in bacteria K09926 - - 0.00000000000000001277 84.0
BYD3_k127_8292554_3 PFAM Cbb3-type cytochrome oxidase component K00407 - - 0.000000000000003695 76.0
BYD3_k127_8297716_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 5.65e-212 666.0
BYD3_k127_8297716_1 TIGRFAM sugar transferase, PEP-CTERM system associated K21303 - 2.7.8.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 565.0
BYD3_k127_8297716_2 Belongs to the UDP-N-acetylglucosamine 2-epimerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 481.0
BYD3_k127_8297716_3 FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 436.0
BYD3_k127_8297716_4 3-beta hydroxysteroid dehydrogenase/isomerase family K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 439.0
BYD3_k127_8297716_5 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 396.0
BYD3_k127_8297716_6 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000000000000001215 206.0
BYD3_k127_8346706_0 AMP-binding enzyme C-terminal domain K02182 - 6.2.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006727 587.0
BYD3_k127_8346706_1 Cupin - - - 0.00000000000000000000000000000000000000000000000000000000000001167 215.0
BYD3_k127_8346706_2 Glutathione S-transferase - - - 0.000000000000000000000000000000000000000000000000000000000002146 216.0
BYD3_k127_8346706_3 Bacterial transcription activator, effector binding domain - - - 0.0000000000000000000000000000000000000000000000000000000725 205.0
BYD3_k127_8355312_0 FtsX-like permease family K02004 - - 0.0 1125.0
BYD3_k127_8355312_1 Histidine kinase K03407 GO:0003674,GO:0005488,GO:0005515,GO:0019904 2.7.13.3 1e-323 1010.0
BYD3_k127_8355312_10 Cache_2 - - - 0.00000000000000000000000000000000000000000000000000000000007502 222.0
BYD3_k127_8355312_11 - - - - 0.0000000000000000000000000000000000000000000001547 173.0
BYD3_k127_8355312_12 Response regulator receiver - - - 0.0001086 45.0
BYD3_k127_8355312_2 chemotaxis sensory transducer K03406,K03776,K05874 - - 4.582e-196 625.0
BYD3_k127_8355312_3 Four helix bundle sensory module for signal transduction K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 616.0
BYD3_k127_8355312_4 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006368 504.0
BYD3_k127_8355312_5 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006841 469.0
BYD3_k127_8355312_6 methyl-accepting chemotaxis K03406,K05874 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008058 440.0
BYD3_k127_8355312_7 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 398.0
BYD3_k127_8355312_8 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000000000000000000000000000000005032 238.0
BYD3_k127_8355312_9 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000000000000000000000000000004958 217.0
BYD3_k127_8379475_0 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 482.0
BYD3_k127_8379475_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009481 433.0
BYD3_k127_8379475_10 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.0006831 50.0
BYD3_k127_8379475_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 344.0
BYD3_k127_8379475_3 PFAM Cyclic nucleotide-binding K21563 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000259 273.0
BYD3_k127_8379475_4 Formylmethanofuran dehydrogenase, subunit e - - - 0.000000000000000000000000000000000000000000000000000000000000000000002683 244.0
BYD3_k127_8379475_5 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000003803 177.0
BYD3_k127_8379475_6 - - - - 0.000000000000000000000000000000000000000000114 164.0
BYD3_k127_8379475_7 - - - - 0.0000000000000000000000000000000000003008 147.0
BYD3_k127_8379475_8 Copper/zinc superoxide dismutase (SODC) K04565 - 1.15.1.1 0.000000000000000000000000009932 118.0
BYD3_k127_8379475_9 PFAM Transketolase central region K00162,K21417 - 1.2.4.1 0.0000000000000009852 78.0
BYD3_k127_8381618_0 Cytochrome C and Quinol oxidase polypeptide I K02274,K02298,K15408 - 1.10.3.10,1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 460.0
BYD3_k127_8381618_1 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 387.0
BYD3_k127_8381618_2 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 307.0
BYD3_k127_8381618_3 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002459 261.0
BYD3_k127_8381618_4 PAP2 superfamily K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000003092 170.0
BYD3_k127_8392034_0 RNA polymerase sigma factor RpoH K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006052 488.0
BYD3_k127_8392034_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 477.0
BYD3_k127_8392034_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006261 406.0
BYD3_k127_8392034_3 cytochrome oxidase assembly K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 357.0
BYD3_k127_8392034_4 signal sequence binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006949 263.0
BYD3_k127_8392034_5 Electron transport protein SCO1 SenC K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006221 264.0
BYD3_k127_8392034_6 SURF1-like protein K14998 - - 0.000000000000000000000000000000000000000000000000000000000000000000002739 246.0
BYD3_k127_8392034_7 Protein of unknown function (DUF2909) - - - 0.00000001646 58.0
BYD3_k127_8413770_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 4.575e-235 743.0
BYD3_k127_8413770_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 467.0
BYD3_k127_8413770_2 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 374.0
BYD3_k127_8413770_3 Archease protein family (MTH1598/TM1083) - - - 0.000000000000000000000000000000000000000000000000000000000217 209.0
BYD3_k127_8413770_4 Nitroreductase family - - - 0.000000000000000000000000000000000000000000003396 173.0
BYD3_k127_8442474_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1280.0
BYD3_k127_8442474_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.055e-319 989.0
BYD3_k127_8442474_10 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 431.0
BYD3_k127_8442474_11 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 427.0
BYD3_k127_8442474_12 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071 412.0
BYD3_k127_8442474_13 Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 399.0
BYD3_k127_8442474_14 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006443 356.0
BYD3_k127_8442474_15 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 335.0
BYD3_k127_8442474_16 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 335.0
BYD3_k127_8442474_17 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000000903 221.0
BYD3_k127_8442474_18 - - - - 0.000000000000000000000000000000000000000000000000000000000000003311 227.0
BYD3_k127_8442474_19 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000003081 212.0
BYD3_k127_8442474_2 TonB dependent receptor K02014 - - 3.736e-269 846.0
BYD3_k127_8442474_20 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000007227 152.0
BYD3_k127_8442474_21 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000000006397 98.0
BYD3_k127_8442474_22 TonB dependent receptor K02014 - - 0.000000000000002895 76.0
BYD3_k127_8442474_23 - - - - 0.00000000000001921 86.0
BYD3_k127_8442474_24 Histidine kinase K07675 - 2.7.13.3 0.000000008641 62.0
BYD3_k127_8442474_3 Rieske 2Fe-2S K00499 - 1.14.15.7 1.973e-195 616.0
BYD3_k127_8442474_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 508.0
BYD3_k127_8442474_5 ABC transporter substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005982 508.0
BYD3_k127_8442474_6 dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 484.0
BYD3_k127_8442474_7 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 487.0
BYD3_k127_8442474_8 TIGRFAM PQQ-dependent dehydrogenase, methanol ethanol family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005078 473.0
BYD3_k127_8442474_9 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 449.0
BYD3_k127_8455157_0 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003572 601.0
BYD3_k127_8455157_1 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000077 497.0
BYD3_k127_8455157_2 ATPases associated with a variety of cellular activities K02049,K15578 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005567 465.0
BYD3_k127_8455157_3 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000008421 272.0
BYD3_k127_8455157_4 Protein of unknown function (DUF1499) - - - 0.00000000000000000000000000000000000000000000000002547 191.0
BYD3_k127_8455157_5 Tripartite ATP-independent periplasmic transporter, DctQ - - - 0.0000000000000000000000000000000000000000001909 167.0
BYD3_k127_8475000_0 TIGRFAM PQQ-dependent dehydrogenase, methanol ethanol family K00114 - 1.1.2.8 0.0 1091.0
BYD3_k127_8475000_1 belongs to the aldehyde dehydrogenase family K00138 - - 1.326e-295 913.0
BYD3_k127_8475000_2 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 - - 2.733e-287 904.0
BYD3_k127_8475000_3 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 5.447e-202 638.0
BYD3_k127_8475000_4 extracellular solute-binding protein, family 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 357.0
BYD3_k127_8475000_5 Transcriptional regulator crp fnr family K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 327.0
BYD3_k127_8475000_6 NapC/NirT cytochrome c family, N-terminal region K02569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 309.0
BYD3_k127_8475000_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001418 250.0
BYD3_k127_8475000_8 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000008898 98.0
BYD3_k127_8492893_0 TIGRFAM PQQ-dependent dehydrogenase, methanol ethanol family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 413.0
BYD3_k127_8492893_1 Bacterial extracellular solute-binding proteins, family 3 - - - 0.00000000000000000000000000134 121.0
BYD3_k127_8492893_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000007915 101.0
BYD3_k127_8492893_3 Bacterial extracellular solute-binding proteins, family 3 - - - 0.0000000000000000001824 93.0
BYD3_k127_8497519_0 Major Facilitator Superfamily K07552,K18552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 408.0
BYD3_k127_8497519_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 391.0
BYD3_k127_8497519_2 Peptidase_C39 like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002957 283.0
BYD3_k127_8497519_3 Protein of unknown function (DUF3014) - - - 0.000000000000000000000000000000000000000000000004044 180.0
BYD3_k127_8497519_4 - - - - 0.0000000000000000000000000003886 123.0
BYD3_k127_849880_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 3.658e-237 739.0
BYD3_k127_849880_1 MreB/Mbl protein K04046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 358.0
BYD3_k127_849880_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000002521 205.0
BYD3_k127_849880_3 RF-1 domain K15034 - - 0.000000000000000000000000000000000000000002472 159.0
BYD3_k127_849880_4 - - - - 0.000000000000000000000000000000000000001026 156.0
BYD3_k127_849880_5 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000006297 162.0
BYD3_k127_849880_6 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000003245 94.0
BYD3_k127_8516076_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1259.0
BYD3_k127_8516076_1 Poly-beta-hydroxybutyrate polymerase K03821 - - 3.156e-220 704.0
BYD3_k127_8516076_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 512.0
BYD3_k127_8516076_3 Transcriptional regulator crp fnr family K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004274 267.0
BYD3_k127_8516076_4 bacterial OsmY and nodulation domain K04065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005901 248.0
BYD3_k127_8516076_5 ribosome binding - - - 0.0000000000000000000000002845 110.0
BYD3_k127_8516076_6 Fructose-bisphosphate aldolase class-I K01623 - 4.1.2.13 0.00000000000003135 73.0
BYD3_k127_8516076_7 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00000000000003822 78.0
BYD3_k127_855913_0 COG1180 Pyruvate-formate lyase-activating enzyme K20449 - 1.3.7.1 1.549e-237 742.0
BYD3_k127_855913_1 amidohydrolase K15358 - 3.5.2.18 5.461e-229 712.0
BYD3_k127_855913_2 Animal haem peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 477.0
BYD3_k127_855913_3 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007113 451.0
BYD3_k127_855913_4 PFAM regulatory protein TetR K22294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 306.0
BYD3_k127_855913_5 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000004899 204.0
BYD3_k127_855913_6 - - - - 0.000000000000000000000000000000000002224 145.0
BYD3_k127_855913_7 pfkB family carbohydrate kinase K00847 - 2.7.1.4 0.000000000000000000000000004045 114.0
BYD3_k127_8629458_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 582.0
BYD3_k127_8629458_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 479.0
BYD3_k127_8629458_2 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 466.0
BYD3_k127_8629458_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004161 274.0
BYD3_k127_8629458_4 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000000000000000002589 149.0
BYD3_k127_8629458_5 Protein conserved in bacteria - - - 0.0000000000000000000000000000000007799 134.0
BYD3_k127_8631566_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1103.0
BYD3_k127_8631566_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 2.849e-295 912.0
BYD3_k127_8631566_10 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 432.0
BYD3_k127_8631566_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005122 421.0
BYD3_k127_8631566_12 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 393.0
BYD3_k127_8631566_13 LysR substrate binding domain K19338 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 394.0
BYD3_k127_8631566_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007141 394.0
BYD3_k127_8631566_15 Aldolase/RraA K10218 - 4.1.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 364.0
BYD3_k127_8631566_16 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003775 367.0
BYD3_k127_8631566_17 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000267 287.0
BYD3_k127_8631566_18 Aromatic-ring-opening dioxygenase LigAB, LigA subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000148 266.0
BYD3_k127_8631566_19 Flavin reductase like domain - - - 0.0000008969 51.0
BYD3_k127_8631566_2 Belongs to the TPP enzyme family K01652 - 2.2.1.6 7.688e-291 900.0
BYD3_k127_8631566_3 PFAM amidohydrolase 2 K10220,K14333 - 4.1.1.46,4.2.1.83 5.934e-202 634.0
BYD3_k127_8631566_4 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 1.459e-196 618.0
BYD3_k127_8631566_5 Amidohydrolase K10221 - 3.1.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 589.0
BYD3_k127_8631566_6 Oxidoreductase K10219 - 1.1.1.312 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 561.0
BYD3_k127_8631566_7 Protocatechuate 4,5-dioxygenase K04099,K04101 - 1.13.11.57,1.13.11.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 522.0
BYD3_k127_8631566_8 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 444.0
BYD3_k127_8631566_9 Domain of unknown function (DUF1932) K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 430.0
BYD3_k127_8633356_0 cytochrome C K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 522.0
BYD3_k127_8633356_1 Cytochrome c-type biogenesis protein K02200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008424 326.0
BYD3_k127_8633356_2 Periplasmic protein thiol K02199 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004874 253.0
BYD3_k127_8633356_3 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000000000000002732 165.0
BYD3_k127_8655748_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 377.0
BYD3_k127_8655748_1 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002603 252.0
BYD3_k127_8655748_2 ATP-independent chaperone mediated protein folding - - - 0.000000000000000000000000000000000000002574 154.0
BYD3_k127_8655748_3 PFAM Methyltransferase type 11 - - - 0.0000000000000000003581 93.0
BYD3_k127_8655748_4 - - - - 0.000000000000009835 89.0
BYD3_k127_8683006_0 Sulfite reductase K00381,K00392 - 1.8.1.2,1.8.7.1 3.562e-285 895.0
BYD3_k127_8683006_1 Peptidase family M3 K01414 - 3.4.24.70 4.508e-276 863.0
BYD3_k127_8683006_10 Glutaredoxin - - - 0.0000000000000000000000000000000000000000000000000000113 196.0
BYD3_k127_8683006_11 Bacterial protein of unknown function (DUF934) - - - 0.000000000000000000000000000000000000000000000000008963 186.0
BYD3_k127_8683006_2 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 555.0
BYD3_k127_8683006_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 477.0
BYD3_k127_8683006_4 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 406.0
BYD3_k127_8683006_5 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 373.0
BYD3_k127_8683006_6 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008691 358.0
BYD3_k127_8683006_7 Sulfate adenylyltransferase K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000109 251.0
BYD3_k127_8683006_8 TIGRFAM phasin family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000276 251.0
BYD3_k127_8683006_9 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000000000000000000000001323 227.0
BYD3_k127_869274_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1056.0
BYD3_k127_869274_1 Sigma-70 region 2 K03088 - - 0.000000000000000003646 86.0
BYD3_k127_869274_2 - - - - 0.0000000000000001317 93.0
BYD3_k127_8728901_0 Belongs to the ABC transporter superfamily K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 581.0
BYD3_k127_8728901_1 Tripartite tricarboxylate transporter TctA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 534.0
BYD3_k127_8728901_2 PFAM Binding-protein-dependent transport system inner membrane component K02026,K10238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 481.0
BYD3_k127_8728901_3 regulatory protein GntR HTH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 345.0
BYD3_k127_8728901_4 Gluconokinase K00851 - 2.7.1.12 0.0000000000000000000000000000000000000000000000003268 180.0
BYD3_k127_8728901_5 PFAM binding-protein-dependent transport systems inner membrane component K02025 - - 0.0000000000000000000427 89.0
BYD3_k127_8765827_0 May be involved in the transport of PQQ or its precursor to the periplasm K06136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 523.0
BYD3_k127_8765827_1 Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT) K00672 - 2.3.1.101 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 475.0
BYD3_k127_8765827_2 Histidine kinase K07675 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 451.0
BYD3_k127_8765827_3 chemotaxis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 398.0
BYD3_k127_8765827_4 GXGXG motif K00202 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 342.0
BYD3_k127_8765827_5 helix_turn_helix, Lux Regulon K07689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 331.0
BYD3_k127_8765827_6 Belongs to the peptidase M48B family - - - 0.000000000000000000000000000000000000000000000000000000000008761 214.0
BYD3_k127_8765827_7 Histidine kinase K07675 - 2.7.13.3 0.00000000000000000000000000000000006037 136.0
BYD3_k127_8784721_0 alpha/beta hydrolase fold K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 546.0
BYD3_k127_8784721_1 III protein, CoA-transferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 534.0
BYD3_k127_8784721_10 Lysin motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002604 256.0
BYD3_k127_8784721_11 Tripartite tricarboxylate transporter family receptor K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000000001681 247.0
BYD3_k127_8784721_12 membrane K07794 - - 0.00000006489 60.0
BYD3_k127_8784721_2 Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005428 489.0
BYD3_k127_8784721_3 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 392.0
BYD3_k127_8784721_4 peptidase S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 383.0
BYD3_k127_8784721_5 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 323.0
BYD3_k127_8784721_6 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 322.0
BYD3_k127_8784721_7 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 291.0
BYD3_k127_8784721_8 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002222 273.0
BYD3_k127_8784721_9 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001689 262.0
BYD3_k127_8787226_0 PepSY-associated TM region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 457.0
BYD3_k127_8787226_1 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 443.0
BYD3_k127_8787226_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 419.0
BYD3_k127_8787226_3 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006898 355.0
BYD3_k127_8787226_4 Lactonase, 7-bladed beta-propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 351.0
BYD3_k127_8787226_5 Bacterial extracellular solute-binding protein K02020 - - 0.000000000000000000000000000000000000000000000002286 188.0
BYD3_k127_8787226_6 Protein of unknown function (DUF3325) - - - 0.0000000000000000000000000003566 119.0
BYD3_k127_8787226_7 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 - 3.1.3.7 0.0000002394 62.0
BYD3_k127_8794960_0 His Kinase A (phospho-acceptor) domain - - - 0.0 1164.0
BYD3_k127_8794960_1 DNA polymerase III K02342 - 2.7.7.7 2.934e-201 649.0
BYD3_k127_8794960_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 437.0
BYD3_k127_8794960_3 CBS domain containing protein K07182 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 411.0
BYD3_k127_8794960_4 Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000004485 175.0
BYD3_k127_8794960_5 - - - - 0.000000000005559 68.0
BYD3_k127_8795110_0 TonB dependent receptor - - - 6.115e-267 838.0
BYD3_k127_8795110_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 440.0
BYD3_k127_8795110_2 PFAM Ornithine cyclodeaminase mu-crystallin K01750,K19743 - 1.5.1.1,4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 345.0
BYD3_k127_8795110_3 Uncharacterised MFS-type transporter YbfB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 353.0
BYD3_k127_8795110_4 - - - - 0.000000000000000000000000000000000000000004153 162.0
BYD3_k127_8807182_0 aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 540.0
BYD3_k127_8807182_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 456.0
BYD3_k127_8807182_2 PFAM MotA TolQ ExbB proton channel K03561,K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 334.0
BYD3_k127_8807182_3 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000000000000006735 232.0
BYD3_k127_8807182_4 PFAM thioesterase superfamily protein K07107 - - 0.000000000000000000000000000000000000000000007073 168.0
BYD3_k127_8807182_5 Type IV pilus biogenesis stability protein PilW - - - 0.00000000000000000000000000000000000001094 148.0
BYD3_k127_8807182_6 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000003326 111.0
BYD3_k127_8840654_0 PFAM Cyclopropane-fatty-acyl-phospholipid synthase K00574 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008168,GO:0008610,GO:0008757,GO:0009058,GO:0009059,GO:0009273,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0030312,GO:0032259,GO:0032787,GO:0034645,GO:0042546,GO:0043170,GO:0043436,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070589,GO:0071554,GO:0071704,GO:0071766,GO:0071767,GO:0071768,GO:0071840,GO:0071944,GO:0072330,GO:1901576 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 547.0
BYD3_k127_8840654_1 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 354.0
BYD3_k127_8840654_2 phosphoglycerate mutase K15634 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000001014 246.0
BYD3_k127_8840654_3 Domain of unknown function (DUF1840) - - - 0.00000000000000000000000000007631 118.0
BYD3_k127_885106_0 His Kinase A (phosphoacceptor) domain - - - 2.575e-215 702.0
BYD3_k127_885106_1 Short-chain dehydrogenase reductase sdr - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 445.0
BYD3_k127_885106_2 PFAM sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 393.0
BYD3_k127_885106_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005715 296.0
BYD3_k127_885106_4 ABC-type sugar transport system periplasmic component K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000001779 234.0
BYD3_k127_885106_5 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000002619 235.0
BYD3_k127_885106_6 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000000000000000000000000000000000000000000000000001455 203.0
BYD3_k127_885106_7 LysR substrate binding domain K21703 - - 0.0000000000000000000000000000000002079 144.0
BYD3_k127_8862105_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 5.83e-304 938.0
BYD3_k127_8862105_1 DctM subunit - - - 1.765e-216 687.0
BYD3_k127_8862105_2 PFAM Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005612 507.0
BYD3_k127_8862105_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000005676 218.0
BYD3_k127_8862105_4 tryptophan synthase subunit beta - - - 0.0000000000000007035 78.0
BYD3_k127_8868876_0 FAD linked oxidases, C-terminal domain - - - 5.4e-231 722.0
BYD3_k127_8868876_1 COG1593 TRAP-type C4-dicarboxylate transport system large permease component K21393 - - 2.259e-216 688.0
BYD3_k127_8868876_10 Protein conserved in bacteria K09984 - - 0.0000000000000000000001528 97.0
BYD3_k127_8868876_2 Bacterial extracellular solute-binding protein, family 7 K21395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 555.0
BYD3_k127_8868876_3 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 299.0
BYD3_k127_8868876_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003367 284.0
BYD3_k127_8868876_5 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004412 271.0
BYD3_k127_8868876_6 Transcriptional - - - 0.00000000000000000000000000000000000000000000000000000000000000002686 250.0
BYD3_k127_8868876_7 Tripartite ATP-independent periplasmic transporters, DctQ component K21394 - - 0.00000000000000000000000000000000000000000000000000000000000001624 239.0
BYD3_k127_8868876_8 NIPSNAP family containing protein - - - 0.0000000000000000000000000000000000000000000000000000006678 194.0
BYD3_k127_8868876_9 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000005846 165.0
BYD3_k127_8925003_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 4.77e-227 709.0
BYD3_k127_8925003_1 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000758 482.0
BYD3_k127_8925003_2 Thioredoxin K05838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 451.0
BYD3_k127_8925003_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 388.0
BYD3_k127_8925003_4 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000002441 244.0
BYD3_k127_8925003_5 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000000000000000000000000000000005641 177.0
BYD3_k127_8935731_0 3-isopropylmalate dehydratase large subunit K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 500.0
BYD3_k127_8935731_1 Phospholipase/Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 303.0
BYD3_k127_8935731_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 299.0
BYD3_k127_8936150_0 TonB dependent receptor K02014 - - 1.036e-217 685.0
BYD3_k127_8936150_1 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 4.377e-215 681.0
BYD3_k127_8936150_2 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 491.0
BYD3_k127_8936150_3 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 499.0
BYD3_k127_8936150_4 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K01488 - 3.5.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008564 378.0
BYD3_k127_8936150_5 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 284.0
BYD3_k127_8968733_0 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 529.0
BYD3_k127_8968733_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000979 386.0
BYD3_k127_8968733_2 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 365.0
BYD3_k127_8968733_3 Bacterial lipid A biosynthesis acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006183 363.0
BYD3_k127_8968733_4 membrane - - - 0.000000000000000000000000000000000000000000000000006192 188.0
BYD3_k127_8968733_5 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000006507 172.0
BYD3_k127_8968733_6 Predicted membrane protein (DUF2306) - - - 0.0000000000000000000000000005167 120.0
BYD3_k127_8968733_7 Phosphopantetheine attachment site K02078 - - 0.000000000000000000000000005583 115.0
BYD3_k127_8968733_8 FabA-like domain - - - 0.000000000003249 78.0
BYD3_k127_8968733_9 - - - - 0.0003276 44.0
BYD3_k127_8971978_0 Diguanylate cyclase - - - 4.945e-231 762.0
BYD3_k127_8971978_1 helix_turn_helix gluconate operon transcriptional repressor K00375 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006429 415.0
BYD3_k127_8971978_10 MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000000000007348 210.0
BYD3_k127_8971978_11 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000001062 137.0
BYD3_k127_8971978_12 oxidation-reduction process K09022 - 3.5.99.10 0.0000000000000000000000000000006028 134.0
BYD3_k127_8971978_13 oxidation-reduction process K09022 - 3.5.99.10 0.0000000000000000000000000004898 117.0
BYD3_k127_8971978_14 Dodecin K09165 - - 0.0000000000000000000005658 108.0
BYD3_k127_8971978_15 - - - - 0.000000000000002283 78.0
BYD3_k127_8971978_16 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.000000000000676 72.0
BYD3_k127_8971978_17 Protein of unknown function (DUF3606) - - - 0.000000000001625 69.0
BYD3_k127_8971978_18 Bacterial inner membrane protein - - - 0.00002579 57.0
BYD3_k127_8971978_19 NlpE C-terminal OB domain K06079 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0010810,GO:0016020,GO:0019867,GO:0030155,GO:0030312,GO:0030313,GO:0031975,GO:0042802,GO:0044462,GO:0044464,GO:0050789,GO:0065007,GO:0071944 - 0.00004585 53.0
BYD3_k127_8971978_2 Glutathione S-transferase K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 386.0
BYD3_k127_8971978_3 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 380.0
BYD3_k127_8971978_4 Lipase (class 2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 387.0
BYD3_k127_8971978_5 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 354.0
BYD3_k127_8971978_6 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 338.0
BYD3_k127_8971978_7 Phospholipase A1 K01058 - 3.1.1.32,3.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005108 334.0
BYD3_k127_8971978_8 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009508 321.0
BYD3_k127_8971978_9 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000000000000002607 208.0
BYD3_k127_8994629_0 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 442.0
BYD3_k127_8994629_1 KR domain K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 360.0
BYD3_k127_8994629_11 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) - - - 0.0000000000000003057 80.0
BYD3_k127_8994629_12 Protein of unknown function (DUF2845) - - - 0.000000000157 67.0
BYD3_k127_8994629_2 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 331.0
BYD3_k127_8994629_3 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 300.0
BYD3_k127_8994629_4 Belongs to the aspartate glutamate racemases family K01779 - 5.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003983 293.0
BYD3_k127_8994629_5 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000001824 210.0
BYD3_k127_8994629_6 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000000002988 207.0
BYD3_k127_8994629_7 Protein of unknown function (DUF3303) - - - 0.00000000000000000000000000000000000000002369 156.0
BYD3_k127_8994629_8 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000000000000000000000000004248 137.0
BYD3_k127_8994629_9 - - - - 0.000000000000000000000000000008978 122.0
BYD3_k127_8995885_0 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K01555 - 3.7.1.2 1.31e-197 624.0
BYD3_k127_8995885_1 Rieske [2Fe-2S] domain K03862,K18068 - 1.14.12.7,1.14.13.82 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 581.0
BYD3_k127_8995885_2 FCD K11475 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003727 265.0
BYD3_k127_8995885_3 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000000000004202 191.0
BYD3_k127_9001664_0 Transcriptional regulator - - - 9.774e-207 657.0
BYD3_k127_9001664_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 313.0
BYD3_k127_9001664_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002226 293.0
BYD3_k127_9001664_3 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K03790 - 2.3.1.128 0.000000000000000000000000000000000002575 147.0
BYD3_k127_9001664_4 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000463 139.0
BYD3_k127_9006765_0 Cysteine-rich domain - - - 8.319e-276 850.0
BYD3_k127_9006765_1 Carboxylesterase family K01432 - 3.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 447.0
BYD3_k127_9006765_10 serine-type endopeptidase activity K04771 - 3.4.21.107 0.00000000000000000000002358 106.0
BYD3_k127_9006765_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 389.0
BYD3_k127_9006765_3 Transcriptional regulator, MarR family with acetyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 368.0
BYD3_k127_9006765_4 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 332.0
BYD3_k127_9006765_5 Protein of unknown function (DUF3501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 313.0
BYD3_k127_9006765_6 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000195 271.0
BYD3_k127_9006765_7 Carboxylesterase family K01066 - - 0.00000000000000000000000000000000000000000000000000000000000000000001242 239.0
BYD3_k127_9006765_8 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K04756 - - 0.00000000000000000000000000000000000000000000000000000000000000000001561 238.0
BYD3_k127_9006765_9 - - - - 0.000000000000000000000000000000000000000000000000003362 193.0
BYD3_k127_9018316_0 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006898 375.0
BYD3_k127_9018316_1 Protein of unknown function (DUF2855) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005365 318.0
BYD3_k127_9018316_2 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 312.0
BYD3_k127_9018316_3 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 308.0
BYD3_k127_9018316_4 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 288.0
BYD3_k127_9018316_5 Small Multidrug Resistance protein K03297 - - 0.0000000000000000000000000000000000000000000158 164.0
BYD3_k127_9018316_6 - - - - 0.0000000000000002482 89.0
BYD3_k127_9036368_0 Dynamin family - - - 3.506e-282 881.0
BYD3_k127_9036368_1 Tetratricopeptide repeat - - - 2.712e-206 657.0
BYD3_k127_9036368_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006738 571.0
BYD3_k127_9036368_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000962 408.0
BYD3_k127_9036368_4 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 363.0
BYD3_k127_9036368_5 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004841 305.0
BYD3_k127_9036368_6 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002995 299.0
BYD3_k127_9036368_7 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.00000000000000000000000000000000000000000002565 184.0
BYD3_k127_937626_0 Belongs to the glutamate synthase family - - - 7.483e-265 821.0
BYD3_k127_937626_1 Amidohydrolase family K01485 - 3.5.4.1 7.708e-212 676.0
BYD3_k127_937626_2 Protein of unknown function (DUF1688) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 595.0
BYD3_k127_937626_3 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003975 328.0
BYD3_k127_937626_4 GTP cyclohydrolase N terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 300.0
BYD3_k127_937626_5 helix_turn_helix, Lux Regulon - - - 0.000000003428 66.0