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Overview

ID MAG00115
Name BYD3_bin.28
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota_B
Class Binatia
Order UBA9968
Family UBA9968
Genus DP-20
Species
Assembly information
Completeness (%) 74.26
Contamination (%) 3.32
GC content (%) 57.0
N50 (bp) 29,336
Genome size (bp) 3,645,087

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3208

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1013927_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1152.0
BYD3_k127_1013927_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 597.0
BYD3_k127_1013927_10 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 308.0
BYD3_k127_1013927_11 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003218 274.0
BYD3_k127_1013927_12 Acyl-CoA dehydrogenase, C-terminal domain K22027 - 1.14.13.235 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001081 280.0
BYD3_k127_1013927_13 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004382 286.0
BYD3_k127_1013927_14 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002806 241.0
BYD3_k127_1013927_15 AMP binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000007117 244.0
BYD3_k127_1013927_16 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001571 227.0
BYD3_k127_1013927_17 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000003155 205.0
BYD3_k127_1013927_18 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000006331 166.0
BYD3_k127_1013927_19 Cys-tRNA(Pro) hydrolase activity K03976,K19055 - - 0.000000000000000000000000000000000000001318 152.0
BYD3_k127_1013927_2 PFAM Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 459.0
BYD3_k127_1013927_20 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000002668 142.0
BYD3_k127_1013927_21 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000000000000000000000000007439 138.0
BYD3_k127_1013927_22 RNA recognition motif - - - 0.0000000000000000000000000000000002552 134.0
BYD3_k127_1013927_23 Universal stress protein - - - 0.000000000000000000000000000000003092 139.0
BYD3_k127_1013927_24 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000000000000000000000000000006287 137.0
BYD3_k127_1013927_25 Peptidase family M54 K06974 - - 0.000000000000000000000000000001865 128.0
BYD3_k127_1013927_26 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000001787 137.0
BYD3_k127_1013927_27 COG0589 Universal stress protein UspA and related K14055 - - 0.00000000000000000000000000003625 128.0
BYD3_k127_1013927_28 PFAM CBS domain K04767 - - 0.0000000000000000000000000065 114.0
BYD3_k127_1013927_29 BON domain - - - 0.000000000000000000000007935 104.0
BYD3_k127_1013927_3 Two component, sigma54 specific, transcriptional regulator, Fis family K02667,K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104 449.0
BYD3_k127_1013927_30 Protein of unknown function (DUF2868) - - - 0.000000000000000000000008264 117.0
BYD3_k127_1013927_31 PFAM zinc finger, DksA TraR C4-type K06204 - - 0.00000000000000000000002172 110.0
BYD3_k127_1013927_32 Glycine-zipper domain - - - 0.00000000000000000000006465 103.0
BYD3_k127_1013927_33 DNA primase activity - - - 0.00000000000000000004171 103.0
BYD3_k127_1013927_34 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000003293 92.0
BYD3_k127_1013927_35 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000005689 91.0
BYD3_k127_1013927_36 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000001485 86.0
BYD3_k127_1013927_37 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000001359 67.0
BYD3_k127_1013927_38 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000005064 64.0
BYD3_k127_1013927_39 Rubrerythrin - - - 0.000000006021 65.0
BYD3_k127_1013927_4 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009412 411.0
BYD3_k127_1013927_41 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.0000439 46.0
BYD3_k127_1013927_42 ferroxidase activity K03594 GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 0.00009145 53.0
BYD3_k127_1013927_43 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0002845 49.0
BYD3_k127_1013927_5 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 401.0
BYD3_k127_1013927_6 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 367.0
BYD3_k127_1013927_7 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 364.0
BYD3_k127_1013927_8 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 336.0
BYD3_k127_1013927_9 Protein of unknown function (DUF445) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 331.0
BYD3_k127_1023647_0 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 562.0
BYD3_k127_1023647_1 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006689 443.0
BYD3_k127_1023647_2 Bacterial extracellular solute-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 382.0
BYD3_k127_1023647_3 PFAM ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008013 351.0
BYD3_k127_1023647_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004261 279.0
BYD3_k127_1023647_5 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001832 256.0
BYD3_k127_1023647_6 Thioredoxin - - - 0.00000000000000000000000000000000000000000005637 164.0
BYD3_k127_1023647_7 Thioredoxin-like - - - 0.00000000000000000000000000008147 124.0
BYD3_k127_1023647_8 - - - - 0.0000000000000006957 84.0
BYD3_k127_1023647_9 GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000004239 52.0
BYD3_k127_1027006_0 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002293 248.0
BYD3_k127_1027006_1 TIM-barrel fold metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000003173 246.0
BYD3_k127_1027006_10 Evidence 4 Homologs of previously reported genes of K07145,K21481 - 1.14.99.48,1.14.99.57 0.00000000000000000000000001551 110.0
BYD3_k127_1027006_11 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000154 109.0
BYD3_k127_1027006_12 Belongs to the BolA IbaG family - - - 0.0000000000000000000001317 99.0
BYD3_k127_1027006_13 abc-type fe3 -hydroxamate transport system, periplasmic component - - - 0.0000000000000000002098 89.0
BYD3_k127_1027006_14 Redoxin - - - 0.0000001996 53.0
BYD3_k127_1027006_15 Belongs to the 5'(3')-deoxyribonucleotidase family K05967 - - 0.000001122 57.0
BYD3_k127_1027006_16 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.000004766 57.0
BYD3_k127_1027006_2 Enoyl-(Acyl carrier protein) reductase K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.000000000000000000000000000000000000000000000000000001945 199.0
BYD3_k127_1027006_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0008150,GO:0008152,GO:0009056,GO:0016491,GO:0044464,GO:0055114,GO:0071704,GO:1901575 - 0.000000000000000000000000000000000000000000000000000003642 199.0
BYD3_k127_1027006_4 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000001475 202.0
BYD3_k127_1027006_5 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls - - - 0.000000000000000000000000000000000000000000000000001621 201.0
BYD3_k127_1027006_6 Asp/Glu/Hydantoin racemase K01799 - 5.2.1.1 0.000000000000000000000000000000000000000000003023 172.0
BYD3_k127_1027006_7 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000000000000000306 151.0
BYD3_k127_1027006_8 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000000000157 124.0
BYD3_k127_1027006_9 Major Facilitator Superfamily - - - 0.0000000000000000000000000008903 127.0
BYD3_k127_1054965_0 dehydrogenase e1 component K00164 - 1.2.4.2 5.891e-293 926.0
BYD3_k127_1054965_1 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 7.514e-280 869.0
BYD3_k127_1054965_10 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008066 491.0
BYD3_k127_1054965_11 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 487.0
BYD3_k127_1054965_12 NmrA-like family K17947 - 5.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 488.0
BYD3_k127_1054965_13 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000941 458.0
BYD3_k127_1054965_14 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 452.0
BYD3_k127_1054965_15 PFAM Binding-protein-dependent transport system inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006017 438.0
BYD3_k127_1054965_16 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 433.0
BYD3_k127_1054965_17 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 433.0
BYD3_k127_1054965_18 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006454 439.0
BYD3_k127_1054965_19 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008327 396.0
BYD3_k127_1054965_2 PFAM NAD-dependent epimerase dehydratase K12454 - 5.1.3.10 2.557e-265 839.0
BYD3_k127_1054965_20 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 382.0
BYD3_k127_1054965_21 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 378.0
BYD3_k127_1054965_22 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009756 373.0
BYD3_k127_1054965_23 His Kinase A (phosphoacceptor) domain K02484,K07636,K07768 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 382.0
BYD3_k127_1054965_24 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 360.0
BYD3_k127_1054965_25 Phosphate transporter family K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 359.0
BYD3_k127_1054965_26 Protein of unknown function (DUF1698) K15257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 349.0
BYD3_k127_1054965_27 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008291 336.0
BYD3_k127_1054965_28 ABC transporter transmembrane region K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005573 344.0
BYD3_k127_1054965_29 dTDP biosynthetic process K00560,K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.1.1.45,2.7.4.9,4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 323.0
BYD3_k127_1054965_3 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 3.948e-261 822.0
BYD3_k127_1054965_30 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006672 276.0
BYD3_k127_1054965_31 PFAM CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004826 271.0
BYD3_k127_1054965_32 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005441 276.0
BYD3_k127_1054965_33 dTDP biosynthetic process K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.9,4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007089 271.0
BYD3_k127_1054965_34 PFAM response regulator receiver K07657,K07659,K07664,K11329 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001816 266.0
BYD3_k127_1054965_35 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008161 250.0
BYD3_k127_1054965_36 Protein of unknown function DUF47 K02039,K07220 - - 0.0000000000000000000000000000000000000000000000000000000000000000001092 237.0
BYD3_k127_1054965_37 mannose-1-phosphate guanylyltransferase activity K00971,K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000583 226.0
BYD3_k127_1054965_38 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000001931 214.0
BYD3_k127_1054965_39 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000000000000000000000000000000000000000000000003091 198.0
BYD3_k127_1054965_4 Alpha-amylase domain K01182,K01187,K01226 - 3.2.1.10,3.2.1.20,3.2.1.93 1.063e-241 758.0
BYD3_k127_1054965_40 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000023 186.0
BYD3_k127_1054965_41 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000001167 183.0
BYD3_k127_1054965_42 Belongs to the Dps family - - - 0.00000000000000000000000000000000000000000001385 173.0
BYD3_k127_1054965_43 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000001838 168.0
BYD3_k127_1054965_44 Haloacid dehalogenase-like hydrolase K07025 - - 0.0000000000000000000000000000000000000001336 158.0
BYD3_k127_1054965_45 SPTR MCP methyltransferase, CheR-type with PAS PAC sensor K00575,K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000406 128.0
BYD3_k127_1054965_46 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000002062 126.0
BYD3_k127_1054965_47 FRG - - - 0.0000000000000000000000000000006028 134.0
BYD3_k127_1054965_48 Cytidylate kinase-like family - - - 0.00000000000000000000000000005819 129.0
BYD3_k127_1054965_49 protein histidine kinase activity K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000002069 119.0
BYD3_k127_1054965_5 Myo-inositol-1-phosphate synthase K01858 GO:0003674,GO:0003824,GO:0004512,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009405,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016853,GO:0016872,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044272,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 609.0
BYD3_k127_1054965_50 - - - - 0.000000000000000000000000001198 117.0
BYD3_k127_1054965_51 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000274 117.0
BYD3_k127_1054965_52 BON domain - - - 0.000000000000000000000004162 111.0
BYD3_k127_1054965_53 - - - - 0.0000000000001255 72.0
BYD3_k127_1054965_54 - - - - 0.000000000001322 74.0
BYD3_k127_1054965_55 Response regulator, receiver K11443 - - 0.000000000001762 73.0
BYD3_k127_1054965_56 PFAM Glycosyl transferase, group 1 - - - 0.000000002566 59.0
BYD3_k127_1054965_57 Peptidoglycan-binding domain 1 protein K07273 - - 0.000000005381 66.0
BYD3_k127_1054965_58 Fibronectin type III domain - - - 0.0000008634 55.0
BYD3_k127_1054965_6 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 566.0
BYD3_k127_1054965_60 PFAM CHAD domain containing protein - - - 0.00001061 54.0
BYD3_k127_1054965_61 Pectate lyase superfamily protein - - - 0.0006191 46.0
BYD3_k127_1054965_7 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 509.0
BYD3_k127_1054965_8 TIGRFAM phosphate binding protein K02040 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 489.0
BYD3_k127_1054965_9 PFAM CheR methyltransferase, SAM binding domain K00575,K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004487 494.0
BYD3_k127_1089693_0 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03669 GO:0005575,GO:0016020 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 616.0
BYD3_k127_1089693_1 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 489.0
BYD3_k127_1089693_10 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K19647 - 1.1.1.291,1.1.1.31 0.000000000000000000000000000000000000000000000000000000003889 211.0
BYD3_k127_1089693_12 intermembrane phospholipid transfer K07323 - - 0.0000000000000000000000000000000000000000003382 166.0
BYD3_k127_1089693_13 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000009844 120.0
BYD3_k127_1089693_14 AAA domain K02450 - - 0.000000000000000000000001978 119.0
BYD3_k127_1089693_15 Maleate cis-trans isomerase K01799 - 5.2.1.1 0.00000000000000000001597 101.0
BYD3_k127_1089693_16 Transglycosylase SLT domain K08309 - - 0.00000000000000000007605 98.0
BYD3_k127_1089693_17 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000005943 91.0
BYD3_k127_1089693_18 peroxiredoxin activity K01607 - 4.1.1.44 0.00000000000000001522 86.0
BYD3_k127_1089693_19 Isochorismatase family K09020 - 3.5.1.110 0.0000000000000002554 85.0
BYD3_k127_1089693_2 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 432.0
BYD3_k127_1089693_20 NMT1/THI5 like K02051 - - 0.0000000000000003989 90.0
BYD3_k127_1089693_21 InterPro IPR007367 - - - 0.0000000000000009529 77.0
BYD3_k127_1089693_22 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000002157 74.0
BYD3_k127_1089693_23 - - - - 0.0000000000008714 73.0
BYD3_k127_1089693_24 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000001575 72.0
BYD3_k127_1089693_25 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000023 71.0
BYD3_k127_1089693_26 - - - - 0.0000004287 56.0
BYD3_k127_1089693_27 - - - - 0.000006514 53.0
BYD3_k127_1089693_3 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006146 359.0
BYD3_k127_1089693_4 PFAM ring hydroxylating dioxygenase, alpha subunit K00479 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002856 279.0
BYD3_k127_1089693_5 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008111 275.0
BYD3_k127_1089693_6 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007251 261.0
BYD3_k127_1089693_7 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008204 255.0
BYD3_k127_1089693_8 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000326 232.0
BYD3_k127_1089693_9 ornithine cyclodeaminase K01750,K19244 - 1.4.1.1,4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000004858 222.0
BYD3_k127_1106742_0 FAD binding domain K00480 - 1.14.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003888 599.0
BYD3_k127_1106742_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K00087 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 422.0
BYD3_k127_1106742_2 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007449 309.0
BYD3_k127_1106742_3 positive regulation of growth - GO:0008150,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0065007 - 0.00000006323 55.0
BYD3_k127_1154512_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead domain K03520,K11177 - 1.17.1.4,1.2.5.3 3.467e-213 686.0
BYD3_k127_1154512_1 5-oxoprolinase K01473 - 3.5.2.14 1.747e-202 651.0
BYD3_k127_1154512_10 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 293.0
BYD3_k127_1154512_11 Cupin 2, conserved barrel domain protein K00450,K11948 - 1.13.11.38,1.13.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002158 279.0
BYD3_k127_1154512_12 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000168 274.0
BYD3_k127_1154512_13 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001134 258.0
BYD3_k127_1154512_14 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003604 258.0
BYD3_k127_1154512_15 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000163 238.0
BYD3_k127_1154512_16 COGs COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000003535 250.0
BYD3_k127_1154512_17 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000002343 204.0
BYD3_k127_1154512_18 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000009851 196.0
BYD3_k127_1154512_19 Glycine/sarcosine/betaine reductase component B subunits - - - 0.0000000000000000000000000000000000000000000002125 183.0
BYD3_k127_1154512_2 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000574 565.0
BYD3_k127_1154512_20 Ring hydroxylating beta subunit - - - 0.000000000000000000000000000000000000000000000399 172.0
BYD3_k127_1154512_21 ABC transporter, phosphonate, periplasmic substrate-binding protein K02051 - - 0.0000000000000000000000000000000000000000001682 173.0
BYD3_k127_1154512_22 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000005997 141.0
BYD3_k127_1154512_23 NMT1-like family - - - 0.000000000000000000000000000001259 135.0
BYD3_k127_1154512_24 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000007654 113.0
BYD3_k127_1154512_25 PFAM Amidohydrolase 2 - - - 0.0000000000000001708 91.0
BYD3_k127_1154512_27 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000001206 59.0
BYD3_k127_1154512_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 550.0
BYD3_k127_1154512_4 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 485.0
BYD3_k127_1154512_5 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008413 457.0
BYD3_k127_1154512_6 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00479,K05708,K14748 - 1.14.12.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 382.0
BYD3_k127_1154512_7 PFAM Amidohydrolase 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004744 367.0
BYD3_k127_1154512_8 Selenoprotein B, glycine betaine sarcosine D-proline reductase family K10672 - 1.21.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 336.0
BYD3_k127_1154512_9 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 306.0
BYD3_k127_1160563_0 PFAM PrkA AAA K07180 - - 0.0 1007.0
BYD3_k127_1160563_1 SpoVR family K06415 - - 1.119e-199 632.0
BYD3_k127_1160563_10 Cytochrome c K17222 - - 0.000000000000000000000000000000003391 134.0
BYD3_k127_1160563_11 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000000000007296 139.0
BYD3_k127_1160563_12 protein conserved in bacteria - - - 0.0000000000000000000000000000008859 135.0
BYD3_k127_1160563_13 Transcription termination factor nusG - - - 0.000000000000000000001056 102.0
BYD3_k127_1160563_14 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000001395 100.0
BYD3_k127_1160563_15 uses NADH to detoxify nitric oxide (NO), protecting several 4Fe-4S NO-sensitive enzymes. Has at least 2 reductase partners, only one of which (NorW, flavorubredoxin reductase) has been identified. NO probably binds to the di-iron center - GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0043446,GO:0043448,GO:0044237,GO:0044248,GO:0071704,GO:1901575 - 0.0000000000002362 78.0
BYD3_k127_1160563_16 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.00000000001599 74.0
BYD3_k127_1160563_2 Belongs to the UPF0229 family K09786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 516.0
BYD3_k127_1160563_3 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 473.0
BYD3_k127_1160563_4 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001327 263.0
BYD3_k127_1160563_5 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005477 254.0
BYD3_k127_1160563_6 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.00000000000000000000000000000000000000000000000000002112 206.0
BYD3_k127_1160563_7 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000004127 197.0
BYD3_k127_1160563_8 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000001362 194.0
BYD3_k127_1160563_9 Histidine kinase - - - 0.000000000000000000000000000000000000000000268 182.0
BYD3_k127_1225112_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0030312,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 8.124e-218 705.0
BYD3_k127_1225112_1 ABC-type Fe3 transport system permease component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 528.0
BYD3_k127_1225112_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009625 377.0
BYD3_k127_1225112_3 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 361.0
BYD3_k127_1225112_4 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 340.0
BYD3_k127_1225112_5 ABC-type Fe3 transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003168 271.0
BYD3_k127_1225112_6 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000000000000000004037 169.0
BYD3_k127_1225112_7 CAAX protease self-immunity - - - 0.0000000000000000000000000008609 121.0
BYD3_k127_1284059_0 Conserved carboxylase domain K01571 - 4.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 377.0
BYD3_k127_1284059_1 - - - - 0.00000000000000000000000000000002057 128.0
BYD3_k127_1303396_0 dna ligase - - - 6.026e-233 726.0
BYD3_k127_1303396_1 ATP dependent DNA ligase C terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 580.0
BYD3_k127_1303396_10 Transcriptional regulator K20968 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006089,GO:0006355,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009438,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019172,GO:0019219,GO:0019222,GO:0019243,GO:0019249,GO:0019752,GO:0031323,GO:0031326,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046185,GO:0046394,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051596,GO:0060255,GO:0061727,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 295.0
BYD3_k127_1303396_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008626 290.0
BYD3_k127_1303396_12 Zinc-binding dehydrogenase K13979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000545 284.0
BYD3_k127_1303396_13 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009219 280.0
BYD3_k127_1303396_14 TIM-barrel fold metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006239 258.0
BYD3_k127_1303396_15 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004857 252.0
BYD3_k127_1303396_16 Alcohol dehydrogenase GroES-like domain K13979 - - 0.0000000000000000000000000000000000000000000000000000000002819 210.0
BYD3_k127_1303396_17 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000008605 210.0
BYD3_k127_1303396_18 Nitrile hydratase beta subunit - - - 0.0000000000000000000000000000000000000000000000000007893 186.0
BYD3_k127_1303396_19 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000361 178.0
BYD3_k127_1303396_2 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 490.0
BYD3_k127_1303396_20 - - - - 0.00000000000000000000000000000000000000000000005944 172.0
BYD3_k127_1303396_21 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000008296 171.0
BYD3_k127_1303396_22 - - - - 0.000000000000000000000000000000001491 135.0
BYD3_k127_1303396_23 - - - - 0.000000000000000000000000002423 118.0
BYD3_k127_1303396_24 Putative regulatory protein - - - 0.000000000000000000000002114 106.0
BYD3_k127_1303396_25 HicA toxin of bacterial toxin-antitoxin, - - - 0.00001405 48.0
BYD3_k127_1303396_26 Pfam Pyridoxamine 5'-phosphate - GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016627,GO:0030312,GO:0031406,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043177,GO:0044464,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0070967,GO:0071944,GO:0097159,GO:0097367,GO:1901363 - 0.00004968 51.0
BYD3_k127_1303396_3 Methionine synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 415.0
BYD3_k127_1303396_4 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007848 406.0
BYD3_k127_1303396_5 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000677 380.0
BYD3_k127_1303396_6 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009493 358.0
BYD3_k127_1303396_7 OpgC protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007055 333.0
BYD3_k127_1303396_8 Nitrile hydratase, alpha chain K01721 - 4.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 314.0
BYD3_k127_1303396_9 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 308.0
BYD3_k127_1344631_0 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 441.0
BYD3_k127_1344631_1 Inhibitor of apoptosis-promoting Bax1 - - - 0.000000004739 63.0
BYD3_k127_135950_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 451.0
BYD3_k127_135950_1 acetylesterase activity K01046 - 3.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000002552 236.0
BYD3_k127_135950_2 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000000001774 188.0
BYD3_k127_135950_3 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.0000000000000000000000000000000000000000000000009869 180.0
BYD3_k127_135950_4 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000007735 104.0
BYD3_k127_135950_5 Creatinase/Prolidase N-terminal domain - - - 0.0000000000000000007618 96.0
BYD3_k127_135950_6 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 GO:0003674,GO:0005215 - 0.000004152 58.0
BYD3_k127_1377124_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 5.533e-260 829.0
BYD3_k127_1377124_1 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 1.041e-250 783.0
BYD3_k127_1377124_10 MaoC like domain - - - 0.00000000000000000000000000000000000000000000000000000004472 199.0
BYD3_k127_1377124_11 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000004969 189.0
BYD3_k127_1377124_12 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.00000000000000000000000000000000000000000000029 174.0
BYD3_k127_1377124_13 TRAP transporter solute receptor TAXI family protein K07080 - - 0.00000000000000000000000000000000000003039 157.0
BYD3_k127_1377124_14 transmembrane transporter activity - - - 0.0000000000000000000000000000000000004119 155.0
BYD3_k127_1377124_15 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000000002245 126.0
BYD3_k127_1377124_16 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000002946 106.0
BYD3_k127_1377124_17 Protein of unknown function (DUF503) K09764 - - 0.000000000000000001179 89.0
BYD3_k127_1377124_18 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000001726 86.0
BYD3_k127_1377124_19 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms K07027 - - 0.00000000007124 66.0
BYD3_k127_1377124_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 4.009e-242 760.0
BYD3_k127_1377124_20 Protein of unknown function (DUF448) K07742 - - 0.000000004214 63.0
BYD3_k127_1377124_3 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005589 560.0
BYD3_k127_1377124_4 response regulator K07712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 509.0
BYD3_k127_1377124_5 transport system fused permease components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 492.0
BYD3_k127_1377124_6 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 459.0
BYD3_k127_1377124_7 FMN-dependent dehydrogenase K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000822 354.0
BYD3_k127_1377124_8 Nitrogen fixation master sensor histidine kinase, PAS domain-containing K02668,K07708,K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 306.0
BYD3_k127_1377124_9 Phenazine biosynthesis protein PhzF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008177 281.0
BYD3_k127_139223_0 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 1.136e-214 685.0
BYD3_k127_139223_1 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 8.594e-208 662.0
BYD3_k127_139223_2 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008313 618.0
BYD3_k127_139223_3 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 332.0
BYD3_k127_139223_4 AMP-binding enzyme C-terminal domain K02363 - 2.7.7.58,6.3.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003635 317.0
BYD3_k127_139223_5 Amidohydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000008847 134.0
BYD3_k127_139223_6 PFAM AzlC - - - 0.0000000000000000000003567 105.0
BYD3_k127_139223_7 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000001535 85.0
BYD3_k127_139808_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 9.932e-282 879.0
BYD3_k127_139808_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.075e-209 664.0
BYD3_k127_139808_10 SMART Elongator protein 3 MiaB NifB K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 398.0
BYD3_k127_139808_11 Lipocalin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005195 370.0
BYD3_k127_139808_12 gluconolactonase K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006075 350.0
BYD3_k127_139808_13 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009244 331.0
BYD3_k127_139808_14 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 285.0
BYD3_k127_139808_15 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002327 278.0
BYD3_k127_139808_16 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005154 271.0
BYD3_k127_139808_17 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075,K15780 - 2.4.2.8,6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000007315 278.0
BYD3_k127_139808_18 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000005258 266.0
BYD3_k127_139808_19 ABC-type nitrate sulfonate bicarbonate transport system ATPase component K02049,K15555 - - 0.000000000000000000000000000000000000000000000000000000000000000000000011 250.0
BYD3_k127_139808_2 COG1053 Succinate dehydrogenase fumarate reductase, flavoprotein subunit - - - 6.826e-196 631.0
BYD3_k127_139808_20 Rhodanese-like domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000004914 237.0
BYD3_k127_139808_21 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000002293 196.0
BYD3_k127_139808_22 - - - - 0.000000000000000000000000000000000000000000000000004234 189.0
BYD3_k127_139808_23 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000002026 194.0
BYD3_k127_139808_24 methyltransferase - - - 0.0000000000000000000000000000000000000000000003373 178.0
BYD3_k127_139808_25 ornithine cyclodeaminase mu-crystallin K01750 - 4.3.1.12 0.0000000000000000000000000000000000000000009968 169.0
BYD3_k127_139808_26 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000001291 160.0
BYD3_k127_139808_27 hydrolase, TatD family' K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000892 156.0
BYD3_k127_139808_28 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000007677 141.0
BYD3_k127_139808_29 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000001885 126.0
BYD3_k127_139808_3 PFAM tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 4.603e-195 618.0
BYD3_k127_139808_30 Cupin domain K11312 - - 0.000000000000000000000000309 108.0
BYD3_k127_139808_31 YbbR-like protein - - - 0.000000000000000000000001776 115.0
BYD3_k127_139808_32 Major facilitator Superfamily - - - 0.00000000000000000000005487 112.0
BYD3_k127_139808_33 Asp/Glu/Hydantoin racemase K01799 - 5.2.1.1 0.0000000000000000000003168 106.0
BYD3_k127_139808_34 - - - - 0.000000000000004191 76.0
BYD3_k127_139808_35 NMT1-like family K02051 - - 0.00000000001987 75.0
BYD3_k127_139808_36 gluconolactonase activity K01053 GO:0003674,GO:0003824,GO:0004341,GO:0016787,GO:0016788,GO:0052689 3.1.1.17 0.000006251 51.0
BYD3_k127_139808_4 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 559.0
BYD3_k127_139808_5 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 542.0
BYD3_k127_139808_6 radical SAM K06871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 518.0
BYD3_k127_139808_7 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00928,K12524 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.3,2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394 505.0
BYD3_k127_139808_8 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 415.0
BYD3_k127_139808_9 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 406.0
BYD3_k127_1419632_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009772 513.0
BYD3_k127_1419632_1 DHH family K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 503.0
BYD3_k127_1419632_10 Domain of unknown function (DUF4416) - - - 0.0000000000000000000000004082 111.0
BYD3_k127_1419632_11 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.000000000000000000000001095 111.0
BYD3_k127_1419632_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 454.0
BYD3_k127_1419632_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 441.0
BYD3_k127_1419632_4 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 361.0
BYD3_k127_1419632_5 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003792 346.0
BYD3_k127_1419632_6 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093 327.0
BYD3_k127_1419632_7 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006201 278.0
BYD3_k127_1419632_8 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000001107 264.0
BYD3_k127_1419632_9 SecD/SecF GG Motif K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000116 264.0
BYD3_k127_1565763_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 1.184e-269 844.0
BYD3_k127_1565763_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 3.536e-208 656.0
BYD3_k127_1565763_10 SMART PDZ DHR GLGF domain protein K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 347.0
BYD3_k127_1565763_11 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 336.0
BYD3_k127_1565763_12 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 325.0
BYD3_k127_1565763_13 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 300.0
BYD3_k127_1565763_14 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 292.0
BYD3_k127_1565763_15 abc transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000371 283.0
BYD3_k127_1565763_16 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003805 279.0
BYD3_k127_1565763_17 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000001043 266.0
BYD3_k127_1565763_18 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000002097 250.0
BYD3_k127_1565763_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 610.0
BYD3_k127_1565763_20 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000001016 243.0
BYD3_k127_1565763_21 ACT domain K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000001647 238.0
BYD3_k127_1565763_22 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000002073 226.0
BYD3_k127_1565763_23 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000001695 218.0
BYD3_k127_1565763_24 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000002683 193.0
BYD3_k127_1565763_25 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000001007 190.0
BYD3_k127_1565763_26 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000001649 177.0
BYD3_k127_1565763_27 PFAM phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000001888 171.0
BYD3_k127_1565763_28 - - - - 0.000000000000000000000000000000000000171 147.0
BYD3_k127_1565763_29 Universal bacterial protein YeaZ K14742 - - 0.000000000000000000000000000000006948 137.0
BYD3_k127_1565763_3 amino acid K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004298 554.0
BYD3_k127_1565763_30 Hemerythrin HHE cation binding domain - - - 0.00000000000004072 78.0
BYD3_k127_1565763_31 Transcription factor zinc-finger K09981 - - 0.0000000001072 67.0
BYD3_k127_1565763_32 - K09794 - - 0.0000000001722 64.0
BYD3_k127_1565763_33 DNA excision K02806 - - 0.000000001739 63.0
BYD3_k127_1565763_34 conserved protein, contains double-stranded beta-helix domain - - - 0.000000004474 59.0
BYD3_k127_1565763_4 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 487.0
BYD3_k127_1565763_5 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004497 467.0
BYD3_k127_1565763_6 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 452.0
BYD3_k127_1565763_7 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 425.0
BYD3_k127_1565763_8 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 372.0
BYD3_k127_1565763_9 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 359.0
BYD3_k127_1572806_0 PFAM Rhodanese domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 380.0
BYD3_k127_1572806_1 - - - - 0.00000000000000000000000000000000001359 140.0
BYD3_k127_1572806_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000001747 105.0
BYD3_k127_1592794_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 323.0
BYD3_k127_1592794_1 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002131 271.0
BYD3_k127_1592794_2 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000000000000000000000000000001166 166.0
BYD3_k127_1592794_3 NMT1-like family - - - 0.00000000000000000000000003415 120.0
BYD3_k127_1592794_4 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000123 111.0
BYD3_k127_1592794_5 Endoribonuclease L-PSP - - - 0.000000000000000000000007932 105.0
BYD3_k127_167318_0 ABC transporter K06147,K18890 - - 1.146e-207 656.0
BYD3_k127_167318_1 Methyltransferase domain - - - 0.00000000000000000000000000000009611 136.0
BYD3_k127_167318_2 Protein of unknown function (DUF1501) - - - 0.00000000000000008566 81.0
BYD3_k127_1677296_0 Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 539.0
BYD3_k127_1677296_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 422.0
BYD3_k127_1677296_2 Bacterial extracellular solute-binding protein, family 7 K21395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004273 334.0
BYD3_k127_1677296_3 C4-dicarboxylate transport system permease DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000106 195.0
BYD3_k127_1677296_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000166 101.0
BYD3_k127_1679968_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01006 - 2.7.9.1 0.0 1177.0
BYD3_k127_1679968_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.563e-317 992.0
BYD3_k127_1679968_10 PFAM 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 301.0
BYD3_k127_1679968_11 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000003756 255.0
BYD3_k127_1679968_12 PFAM S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000003165 217.0
BYD3_k127_1679968_13 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000003794 214.0
BYD3_k127_1679968_14 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000000005907 205.0
BYD3_k127_1679968_15 PFAM Dihydrodipicolinate synthetase K11946 - - 0.000000000000000000000000000000000000000000000000000000001872 212.0
BYD3_k127_1679968_16 Bacterial membrane protein, YfhO - - - 0.000000000000000000000000000000000000000000619 180.0
BYD3_k127_1679968_17 GrpE K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000004393 150.0
BYD3_k127_1679968_18 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000001353 134.0
BYD3_k127_1679968_19 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000000000001985 110.0
BYD3_k127_1679968_2 Heat shock 70 kDa protein K04043 - - 2.261e-310 961.0
BYD3_k127_1679968_20 Prokaryotic N-terminal methylation motif - - - 0.00000000000000449 80.0
BYD3_k127_1679968_21 PFAM Transposase, IS4-like - - - 0.000000004841 61.0
BYD3_k127_1679968_3 PFAM Type II secretion system protein E K02652 - - 2.073e-215 682.0
BYD3_k127_1679968_4 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 538.0
BYD3_k127_1679968_5 DnaJ central domain K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 474.0
BYD3_k127_1679968_6 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 460.0
BYD3_k127_1679968_7 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009734 396.0
BYD3_k127_1679968_8 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 368.0
BYD3_k127_1679968_9 Two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 333.0
BYD3_k127_170699_0 UPF0365 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 501.0
BYD3_k127_170699_1 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 441.0
BYD3_k127_170699_2 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 398.0
BYD3_k127_170699_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003683 275.0
BYD3_k127_170699_4 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000005925 194.0
BYD3_k127_170699_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000882 191.0
BYD3_k127_170699_6 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000003255 134.0
BYD3_k127_170699_7 PFAM amidohydrolase K07045 - - 0.0000000000000000000000000268 113.0
BYD3_k127_170699_8 oxidation-reduction process - - - 0.0000000000000000003568 92.0
BYD3_k127_170699_9 Belongs to the peptidase S41A family K03797 GO:0003674,GO:0003824,GO:0004175,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009653,GO:0009987,GO:0016787,GO:0019538,GO:0023052,GO:0030154,GO:0030288,GO:0030313,GO:0030435,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043603,GO:0043900,GO:0043902,GO:0043934,GO:0044237,GO:0044238,GO:0044464,GO:0046983,GO:0048518,GO:0048522,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0140096,GO:1900190,GO:1900192,GO:1901564 3.4.21.102 0.00007396 53.0
BYD3_k127_1725484_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520,K21739 - 1.16.1.1 2.109e-231 722.0
BYD3_k127_1725484_1 TIGRFAM phosphoenolpyruvate-protein phosphotransferase K08484 - 2.7.3.9 1.402e-197 643.0
BYD3_k127_1725484_10 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K15585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 330.0
BYD3_k127_1725484_11 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000825 315.0
BYD3_k127_1725484_12 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 287.0
BYD3_k127_1725484_13 Peptidase M16 inactive domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004651 262.0
BYD3_k127_1725484_14 Abc transporter K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001302 258.0
BYD3_k127_1725484_15 ABC transporter substrate-binding protein K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000001031 246.0
BYD3_k127_1725484_16 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13889 - - 0.0000000000000000000000000000000000000000000000000000000000000007089 239.0
BYD3_k127_1725484_17 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.000000000000000000000000000000000000000000000000000000000000003927 230.0
BYD3_k127_1725484_18 - - - - 0.000000000000000000000000000000000000000000000000000000000001685 213.0
BYD3_k127_1725484_19 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000003764 217.0
BYD3_k127_1725484_2 DNA polymerase beta thumb K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 616.0
BYD3_k127_1725484_20 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000002895 215.0
BYD3_k127_1725484_21 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000001529 203.0
BYD3_k127_1725484_22 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000009081 199.0
BYD3_k127_1725484_23 Pfam SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000001097 185.0
BYD3_k127_1725484_24 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000355 175.0
BYD3_k127_1725484_25 mandelate racemase muconate lactonizing K19802 - 5.1.1.20 0.0000000000000000000000000000000000000000001416 174.0
BYD3_k127_1725484_26 Pfam SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000001708 168.0
BYD3_k127_1725484_27 - - - - 0.000000000000000000000000000000000000000005158 165.0
BYD3_k127_1725484_28 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000001392 147.0
BYD3_k127_1725484_29 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000001787 138.0
BYD3_k127_1725484_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K15372 - 2.6.1.19,2.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 539.0
BYD3_k127_1725484_30 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000003446 136.0
BYD3_k127_1725484_31 Belongs to the enoyl-CoA hydratase isomerase family K18383 - 4.1.2.41,4.2.1.101 0.0000000000000000000000000000302 129.0
BYD3_k127_1725484_32 AsmA-like C-terminal region K07289,K09800 - - 0.00000000000000000000000003699 126.0
BYD3_k127_1725484_33 acetyltransferase - - - 0.000000000000000000000005416 109.0
BYD3_k127_1725484_35 PFAM Isochorismatase - - - 0.00000000000000000002881 99.0
BYD3_k127_1725484_36 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding K00335,K18331,K22339 - 1.12.1.3,1.17.1.11,1.6.5.3 0.000000000000008453 78.0
BYD3_k127_1725484_37 Amidohydrolase K07045 - - 0.000000000001866 68.0
BYD3_k127_1725484_38 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000001368 58.0
BYD3_k127_1725484_39 NHL repeat - - - 0.00001091 57.0
BYD3_k127_1725484_4 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 389.0
BYD3_k127_1725484_40 Alpha/beta hydrolase family - - - 0.00004887 55.0
BYD3_k127_1725484_5 PFAM Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 370.0
BYD3_k127_1725484_6 Phospholipase D Transphosphatidylase K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 362.0
BYD3_k127_1725484_7 Phospholipase D Transphosphatidylase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006477 361.0
BYD3_k127_1725484_8 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005819 358.0
BYD3_k127_1725484_9 Belongs to the peptidase S1C family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 340.0
BYD3_k127_1742807_0 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 506.0
BYD3_k127_1742807_1 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 441.0
BYD3_k127_1742807_10 membrane - - - 0.0005033 50.0
BYD3_k127_1742807_2 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 406.0
BYD3_k127_1742807_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000001244 201.0
BYD3_k127_1742807_4 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000002969 198.0
BYD3_k127_1742807_5 COG3209 Rhs family protein - - - 0.0000000000000000003964 102.0
BYD3_k127_1742807_6 NMT1-like family K02051 - - 0.00000000000000009546 91.0
BYD3_k127_1742807_7 Protein of unknown function (DUF2283) - - - 0.0000000438 57.0
BYD3_k127_1742807_8 Protein of unknown function (DUF2283) - - - 0.0000001389 53.0
BYD3_k127_1789466_0 Chemotaxis K13924 - 2.1.1.80,3.1.1.61 1.308e-255 831.0
BYD3_k127_1789466_1 COG0747 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 493.0
BYD3_k127_1789466_2 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.00000000000000000000000000000000000000000000000000000000000000000002957 240.0
BYD3_k127_1789466_3 Histidine kinase - - - 0.0000000000000000000005179 100.0
BYD3_k127_1789466_4 NMT1-like family K02051 - - 0.000000000000000000009531 104.0
BYD3_k127_1789466_5 Evidence 4 Homologs of previously reported genes of K07145,K21481 - 1.14.99.48,1.14.99.57 0.0000000000000000962 80.0
BYD3_k127_1789466_6 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.0000000000000008876 86.0
BYD3_k127_1792387_0 Sodium:sulfate symporter transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006455 264.0
BYD3_k127_1847611_0 C-terminus of AA_permease K03294 - - 3.539e-212 670.0
BYD3_k127_1847611_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000002327 183.0
BYD3_k127_1847611_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K21566 - - 0.00000000000000000000000000009894 132.0
BYD3_k127_1847611_3 Belongs to the enoyl-CoA hydratase isomerase family K08299 - 4.2.1.149 0.00000000000000000001746 98.0
BYD3_k127_1847611_4 Ferredoxin - - - 0.0000000000000000001637 96.0
BYD3_k127_1847611_6 dehalogenase - - - 0.000000004069 65.0
BYD3_k127_1847611_7 Haem-degrading - - - 0.000007581 49.0
BYD3_k127_1950671_0 dead deah K03724 - - 0.0 1439.0
BYD3_k127_1950671_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 2.246e-273 854.0
BYD3_k127_1950671_10 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 384.0
BYD3_k127_1950671_11 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 375.0
BYD3_k127_1950671_12 PFAM PfkB domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 374.0
BYD3_k127_1950671_13 Glycosyltransferase like family 2 K10012 - 2.4.2.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003278 373.0
BYD3_k127_1950671_14 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 355.0
BYD3_k127_1950671_15 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000384 343.0
BYD3_k127_1950671_16 Cytochrome C assembly protein K02195 GO:0001539,GO:0002048,GO:0002049,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006518,GO:0006629,GO:0006643,GO:0006664,GO:0006807,GO:0006810,GO:0006928,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009237,GO:0009247,GO:0009636,GO:0009987,GO:0015886,GO:0016020,GO:0016021,GO:0016209,GO:0016491,GO:0016684,GO:0019184,GO:0019290,GO:0019748,GO:0031224,GO:0031226,GO:0034641,GO:0040011,GO:0042221,GO:0043043,GO:0043107,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044425,GO:0044459,GO:0044464,GO:0044550,GO:0046467,GO:0048870,GO:0050896,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051674,GO:0051716,GO:0055114,GO:0070887,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0071973,GO:0071975,GO:0071977,GO:0071978,GO:0097237,GO:0097588,GO:0098754,GO:0098869,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901678,GO:1903509,GO:1990748 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001053 270.0
BYD3_k127_1950671_17 TIGRFAM signal peptidase I K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000001097 265.0
BYD3_k127_1950671_18 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001212 229.0
BYD3_k127_1950671_19 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000008162 197.0
BYD3_k127_1950671_2 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 6.003e-204 644.0
BYD3_k127_1950671_20 Thioredoxin-like K02199,K03671 - - 0.00000000000000000000000000000000000000000000000007963 183.0
BYD3_k127_1950671_21 CcmB protein K02193,K02194 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031224,GO:0031226,GO:0032991,GO:0042623,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.41 0.00000000000000000000000000000000000000000000008967 176.0
BYD3_k127_1950671_22 PFAM ABC transporter related K02193 - 3.6.3.41 0.00000000000000000000000000000000000000006482 161.0
BYD3_k127_1950671_23 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000004411 136.0
BYD3_k127_1950671_24 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 GO:0003674,GO:0003824,GO:0004143,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006654,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0045017,GO:0046473,GO:0046474,GO:0046486,GO:0050896,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.1.107 0.0000000000000000000000000000008281 125.0
BYD3_k127_1950671_25 PFAM Conserved TM helix - - - 0.000000000000000000000000000006498 127.0
BYD3_k127_1950671_26 subunit of a heme lyase K02198,K02200 - - 0.00000000000000000000000001012 117.0
BYD3_k127_1950671_27 Catalyzes the conversion of maleate to fumarate K01799 - 5.2.1.1 0.0000000000001302 81.0
BYD3_k127_1950671_28 - - - - 0.000000000005434 70.0
BYD3_k127_1950671_29 - - - - 0.00000004942 60.0
BYD3_k127_1950671_3 PFAM Cytochrome C assembly protein K02198 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 571.0
BYD3_k127_1950671_4 UDP binding domain K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 554.0
BYD3_k127_1950671_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 509.0
BYD3_k127_1950671_6 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006024 470.0
BYD3_k127_1950671_7 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007154 434.0
BYD3_k127_1950671_8 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead domain K03520 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 432.0
BYD3_k127_1950671_9 Belongs to the UbiD family K03182 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 421.0
BYD3_k127_2004916_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 9.166e-230 729.0
BYD3_k127_2004916_1 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004781 456.0
BYD3_k127_2004916_10 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000000000534 97.0
BYD3_k127_2004916_2 Sigma-54 interaction domain K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007945 431.0
BYD3_k127_2004916_3 PFAM Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 335.0
BYD3_k127_2004916_4 repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 334.0
BYD3_k127_2004916_5 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 301.0
BYD3_k127_2004916_6 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000006793 269.0
BYD3_k127_2004916_7 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005448 268.0
BYD3_k127_2004916_8 RNA recognition motif - - - 0.000000000000000000000000000002362 123.0
BYD3_k127_2004916_9 acylphosphatase activity K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.0000000000000000000002062 103.0
BYD3_k127_207520_0 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005045 507.0
BYD3_k127_207520_1 TIGRFAM sulfate adenylyltransferase, small subunit K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000744 344.0
BYD3_k127_207520_2 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005655 340.0
BYD3_k127_207520_3 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 346.0
BYD3_k127_207520_4 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 299.0
BYD3_k127_207520_5 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000005384 235.0
BYD3_k127_207520_6 inositol 2-dehydrogenase activity K00010 - 1.1.1.18,1.1.1.369 0.0000000000000000000000000000000000000000000000003774 189.0
BYD3_k127_207520_7 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000008933 146.0
BYD3_k127_207520_8 ATP-grasp domain - - - 0.000000000000000000000000000000003134 144.0
BYD3_k127_207520_9 RESPONSE REGULATOR receiver - - - 0.00000000008091 64.0
BYD3_k127_2141437_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 7.274e-274 862.0
BYD3_k127_2141437_1 Deoxyhypusine synthase K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 544.0
BYD3_k127_2141437_10 KH domain K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004793 302.0
BYD3_k127_2141437_11 PFAM 4-hydroxyphenylacetate 3-hydroxylase K00483 - 1.14.14.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004239 300.0
BYD3_k127_2141437_12 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003023 275.0
BYD3_k127_2141437_13 TIM-barrel fold metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001387 255.0
BYD3_k127_2141437_14 TIM-barrel fold metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002099 253.0
BYD3_k127_2141437_15 CoA-transferase family III K07749 GO:0003674,GO:0003824,GO:0008410,GO:0016740,GO:0016782,GO:0047369 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000001878 247.0
BYD3_k127_2141437_16 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000005344 237.0
BYD3_k127_2141437_17 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000006203 223.0
BYD3_k127_2141437_18 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000003453 206.0
BYD3_k127_2141437_19 Phosphoenolpyruvate phosphomutase K20454 - 4.1.3.32 0.000000000000000000000000000000000000000000000000005267 192.0
BYD3_k127_2141437_2 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 512.0
BYD3_k127_2141437_20 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000005183 194.0
BYD3_k127_2141437_21 Class ii aldolase K01628,K03077 - 4.1.2.17,5.1.3.4 0.000000000000000000000000000000000000000000000001689 182.0
BYD3_k127_2141437_22 Nuclear protein SET K07117 - - 0.000000000000000000000000000000000000000000002067 171.0
BYD3_k127_2141437_23 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000001029 134.0
BYD3_k127_2141437_24 RNA recognition motif - - - 0.00000000000000000000000000000001643 129.0
BYD3_k127_2141437_25 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000946 132.0
BYD3_k127_2141437_26 Thioesterase superfamily K10806 - - 0.000000000000000000000000000248 119.0
BYD3_k127_2141437_27 regulation of translation K03530,K05788 - - 0.000000000000000000000008034 104.0
BYD3_k127_2141437_28 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.000000000000000000000008953 112.0
BYD3_k127_2141437_29 carboxymuconolactone decarboxylase - - - 0.0000000000000000000008784 105.0
BYD3_k127_2141437_3 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 512.0
BYD3_k127_2141437_30 glyoxalase bleomycin resistance protein dioxygenase K01759,K08234 - 4.4.1.5 0.00000000000000000001655 96.0
BYD3_k127_2141437_31 peptidyl-tyrosine sulfation - - - 0.0000000000000004045 88.0
BYD3_k127_2141437_32 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000001059 83.0
BYD3_k127_2141437_33 - - - - 0.000000000001104 74.0
BYD3_k127_2141437_34 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000002845 59.0
BYD3_k127_2141437_35 - - - - 0.00000003936 61.0
BYD3_k127_2141437_36 Conserved carboxylase domain - - - 0.000455 49.0
BYD3_k127_2141437_37 Conserved carboxylase domain K01571 - 4.1.1.3 0.0007654 48.0
BYD3_k127_2141437_4 virulence factor MVIN family protein K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 501.0
BYD3_k127_2141437_5 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 431.0
BYD3_k127_2141437_6 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 417.0
BYD3_k127_2141437_7 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 386.0
BYD3_k127_2141437_8 esterase K01432 - 3.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 366.0
BYD3_k127_2141437_9 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 328.0
BYD3_k127_2202622_0 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000001156 124.0
BYD3_k127_2202622_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases K14733 - 1.14.13.107 0.000000000000000000000000006942 116.0
BYD3_k127_2202622_2 Belongs to the ompA family - - - 0.000000000002127 71.0
BYD3_k127_2202622_3 Domain of unknown function (DUF4398) - - - 0.0000000786 59.0
BYD3_k127_2226848_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 570.0
BYD3_k127_2226848_1 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 566.0
BYD3_k127_2226848_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009019 379.0
BYD3_k127_2226848_3 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 295.0
BYD3_k127_2226848_4 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000008768 241.0
BYD3_k127_2226848_5 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000003446 171.0
BYD3_k127_2226848_6 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.00000000000000000000000000000000000001821 155.0
BYD3_k127_2226848_7 Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase K07559 - - 0.00000000000000000000000000000000005557 139.0
BYD3_k127_2226848_8 AntiSigma factor K07167 - - 0.00000001619 61.0
BYD3_k127_2226848_9 Sporulation related domain - - - 0.0005033 50.0
BYD3_k127_2316428_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 1.157e-210 669.0
BYD3_k127_2316428_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0048033,GO:0048034,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 326.0
BYD3_k127_2316428_11 Copper resistance protein CopD K07245 - - 0.00000014 60.0
BYD3_k127_2316428_2 Cytochrome oxidase assembly protein K02259,K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002591 282.0
BYD3_k127_2316428_3 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000001218 250.0
BYD3_k127_2316428_4 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000006693 237.0
BYD3_k127_2316428_5 Cytochrome c oxidase, subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000001103 172.0
BYD3_k127_2316428_6 SCO1/SenC K07152,K08976 - - 0.000000000000000000000000000000000000000009982 162.0
BYD3_k127_2316428_7 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000003642 141.0
BYD3_k127_2316428_8 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000499 118.0
BYD3_k127_2316428_9 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000468 64.0
BYD3_k127_2317002_0 Belongs to the aldehyde dehydrogenase family K13821 - 1.2.1.88,1.5.5.2 1.296e-294 934.0
BYD3_k127_2317002_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 1.779e-233 734.0
BYD3_k127_2317002_10 Hydantoin racemase K16841 - 5.1.99.3 0.000000000000001245 87.0
BYD3_k127_2317002_12 Domain of unknown function (DUF4926) - - - 0.000008878 51.0
BYD3_k127_2317002_2 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 414.0
BYD3_k127_2317002_3 PFAM alpha beta hydrolase K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 368.0
BYD3_k127_2317002_4 HNH endonuclease K07454 - - 0.00000000000000000000000000000000000000000000000004781 188.0
BYD3_k127_2317002_5 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000001403 184.0
BYD3_k127_2317002_6 - - - - 0.00000000000000000000006526 102.0
BYD3_k127_2317002_7 InterPro IPR007367 - - - 0.000000000000000000001276 97.0
BYD3_k127_2317002_8 - - - - 0.00000000000000000000189 95.0
BYD3_k127_2317002_9 protein possibly involved in utilization of glycolate and propanediol - - - 0.0000000000000000001198 92.0
BYD3_k127_2317144_0 Type I phosphodiesterase / nucleotide pyrophosphatase K01130 - 3.1.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 580.0
BYD3_k127_2317144_1 all-trans-retinol 13,14-reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006629 412.0
BYD3_k127_2317144_10 TIGRFAM DNA binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005171 247.0
BYD3_k127_2317144_11 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001885 252.0
BYD3_k127_2317144_12 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000001774 246.0
BYD3_k127_2317144_13 Pfam:AmoA K07120 - - 0.000000000000000000000000000000000000000000000000000000000001066 223.0
BYD3_k127_2317144_14 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000001588 203.0
BYD3_k127_2317144_15 nUDIX hydrolase - GO:0003674,GO:0003824,GO:0016787,GO:0016817,GO:0016818 - 0.0000000000000000000000000000000000000000000000005346 181.0
BYD3_k127_2317144_16 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000007948 67.0
BYD3_k127_2317144_17 Belongs to the ompA family - - - 0.00001486 51.0
BYD3_k127_2317144_2 PBP superfamily domain K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 358.0
BYD3_k127_2317144_3 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009273 350.0
BYD3_k127_2317144_4 Binding-protein-dependent transport system inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 288.0
BYD3_k127_2317144_5 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K16874 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005959 290.0
BYD3_k127_2317144_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008663 282.0
BYD3_k127_2317144_7 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002052 275.0
BYD3_k127_2317144_8 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02045,K02049,K02068,K02071,K06857,K10112,K11072 - 3.6.3.25,3.6.3.30,3.6.3.31,3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000168 286.0
BYD3_k127_2317144_9 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000504 273.0
BYD3_k127_2352145_0 Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate K01612 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044464 4.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 533.0
BYD3_k127_2352145_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009189 477.0
BYD3_k127_2352145_10 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000008605 242.0
BYD3_k127_2352145_11 Belongs to the precorrin methyltransferase family K13542 - 2.1.1.107,4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000008431 228.0
BYD3_k127_2352145_12 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000008845 208.0
BYD3_k127_2352145_13 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000001102 202.0
BYD3_k127_2352145_14 NPCBM-associated, NEW3 domain of alpha-galactosidase - - - 0.00000000000000000000000000000000000000000000000000001359 208.0
BYD3_k127_2352145_15 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000001304 189.0
BYD3_k127_2352145_16 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000001977 184.0
BYD3_k127_2352145_17 response regulator K02479 - - 0.000000000000000000000000000000000000000000000001458 182.0
BYD3_k127_2352145_18 PFAM Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000007415 164.0
BYD3_k127_2352145_19 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000003072 139.0
BYD3_k127_2352145_2 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007877 480.0
BYD3_k127_2352145_20 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.0000000000000000000000000002644 121.0
BYD3_k127_2352145_21 oxidation-reduction process - - - 0.0000000000000000000000000004987 117.0
BYD3_k127_2352145_22 sulfopyruvate decarboxylase, alpha subunit K06034 - 4.1.1.79 0.000000000000000000000000001438 120.0
BYD3_k127_2352145_23 PFAM Glutathione S-transferase, N-terminal K00799 - 2.5.1.18 0.00000000000000000000000000237 122.0
BYD3_k127_2352145_24 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000002653 83.0
BYD3_k127_2352145_25 Cytochrome C' - - - 0.00000000000000007471 87.0
BYD3_k127_2352145_26 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000001429 85.0
BYD3_k127_2352145_27 carbon monoxide dehydrogenase K09386 - - 0.00000000000001908 79.0
BYD3_k127_2352145_28 Redoxin K03564 - 1.11.1.15 0.00000002709 57.0
BYD3_k127_2352145_29 PFAM AhpC TSA family K03564 - 1.11.1.15 0.00000007956 58.0
BYD3_k127_2352145_3 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 436.0
BYD3_k127_2352145_4 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 405.0
BYD3_k127_2352145_5 PFAM ABC transporter related K01990,K19340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 330.0
BYD3_k127_2352145_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 314.0
BYD3_k127_2352145_7 PFAM Binding-protein-dependent transport K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006932 295.0
BYD3_k127_2352145_8 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 301.0
BYD3_k127_2352145_9 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000366 280.0
BYD3_k127_241208_0 Thiamine pyrophosphate enzyme, central domain - - - 3.17e-239 752.0
BYD3_k127_241208_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 9.8e-236 741.0
BYD3_k127_241208_2 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 525.0
BYD3_k127_241208_3 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000003386 178.0
BYD3_k127_241208_4 Transcriptional regulator - - - 0.000000000000000000000000004805 117.0
BYD3_k127_241208_5 - - - - 0.000000000000000000001022 97.0
BYD3_k127_241208_6 - - - - 0.000000000000000000003958 95.0
BYD3_k127_241208_7 - - - - 0.0002915 50.0
BYD3_k127_2448545_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0 1110.0
BYD3_k127_2448545_1 CoA-binding domain protein - - - 0.0 1028.0
BYD3_k127_2448545_10 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 410.0
BYD3_k127_2448545_11 COG3653 N-acyl-D-aspartate D-glutamate deacylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004746 415.0
BYD3_k127_2448545_12 Sugar (and other) transporter K08178 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008093 405.0
BYD3_k127_2448545_13 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 400.0
BYD3_k127_2448545_14 Belongs to the UbiD family K16874 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 389.0
BYD3_k127_2448545_15 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 389.0
BYD3_k127_2448545_16 Zinc-binding dehydrogenase K00001,K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 359.0
BYD3_k127_2448545_17 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 354.0
BYD3_k127_2448545_18 nitrite transmembrane transporter activity K02575,K08223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007333 348.0
BYD3_k127_2448545_19 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009274 324.0
BYD3_k127_2448545_2 SNF2 family N-terminal domain - - - 5.19e-302 959.0
BYD3_k127_2448545_20 formate dehydrogenase (NAD+) activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007957 315.0
BYD3_k127_2448545_21 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007909 316.0
BYD3_k127_2448545_22 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009081 298.0
BYD3_k127_2448545_23 MgtC family K07507 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009288 289.0
BYD3_k127_2448545_24 Cell shape determining protein MreB Mrl K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002481 270.0
BYD3_k127_2448545_25 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000004905 256.0
BYD3_k127_2448545_26 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000002508 251.0
BYD3_k127_2448545_27 Carboxylesterase family K01432 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000008182 241.0
BYD3_k127_2448545_28 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000002475 232.0
BYD3_k127_2448545_29 lipid kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000001475 234.0
BYD3_k127_2448545_3 Belongs to the TPP enzyme family K01652 - 2.2.1.6 7.613e-271 844.0
BYD3_k127_2448545_30 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000002517 222.0
BYD3_k127_2448545_31 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000262 214.0
BYD3_k127_2448545_32 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000000000000000000000003008 207.0
BYD3_k127_2448545_33 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000004459 208.0
BYD3_k127_2448545_34 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000002311 196.0
BYD3_k127_2448545_35 PAS domain - - - 0.00000000000000000000000000000000000000000000000001129 184.0
BYD3_k127_2448545_36 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000005485 191.0
BYD3_k127_2448545_37 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000002729 181.0
BYD3_k127_2448545_38 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000004656 177.0
BYD3_k127_2448545_39 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000009173 167.0
BYD3_k127_2448545_4 acyl-CoA transferases carnitine dehydratase K07749 - 2.8.3.16 7.694e-201 632.0
BYD3_k127_2448545_40 Regulatory protein GntR HTH K05799 - - 0.0000000000000000000000000000000000000002378 161.0
BYD3_k127_2448545_41 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000004209 150.0
BYD3_k127_2448545_42 protein conserved in bacteria - - - 0.00000000000000000000000000000000000003155 151.0
BYD3_k127_2448545_43 Adenylate cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000001468 149.0
BYD3_k127_2448545_44 SWI complex, BAF60b domains - - - 0.0000000000000000000000000000000000768 134.0
BYD3_k127_2448545_45 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000005904 136.0
BYD3_k127_2448545_46 Protein of unknown function (DUF3175) - - - 0.0000000000000000000000000000002788 126.0
BYD3_k127_2448545_47 - - - - 0.00000000000000000000000000006888 117.0
BYD3_k127_2448545_48 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000001016 106.0
BYD3_k127_2448545_49 Voltage gated chloride channel K03281 - - 0.0000000000000000000001112 108.0
BYD3_k127_2448545_5 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 614.0
BYD3_k127_2448545_50 NMT1-like family K02051 - - 0.0000000000000000000001999 109.0
BYD3_k127_2448545_51 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.00000000000000000008586 101.0
BYD3_k127_2448545_53 ABC transporter, phosphonate, periplasmic substrate-binding protein K02051 - - 0.00000000000002423 84.0
BYD3_k127_2448545_54 Iron-binding zinc finger CDGSH type - - - 0.00000000000003872 76.0
BYD3_k127_2448545_55 Amidohydrolase - - - 0.0000000000000812 83.0
BYD3_k127_2448545_56 NMT1/THI5 like K02051 - - 0.0000002429 62.0
BYD3_k127_2448545_57 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000002875 54.0
BYD3_k127_2448545_58 conserved protein, contains double-stranded beta-helix domain - - - 0.000001383 55.0
BYD3_k127_2448545_59 NMT1/THI5 like - - - 0.0001731 53.0
BYD3_k127_2448545_6 COG0145 N-methylhydantoinase A acetone carboxylase, beta subunit K01473 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002636 592.0
BYD3_k127_2448545_60 peroxiredoxin activity K01607 - 4.1.1.44 0.0006968 44.0
BYD3_k127_2448545_7 Major Facilitator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 505.0
BYD3_k127_2448545_8 DEAD DEAH box helicase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 493.0
BYD3_k127_2448545_9 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00122,K00335 - 1.17.1.9,1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008246 489.0
BYD3_k127_246499_0 COG0526, thiol-disulfide isomerase and thioredoxins - - - 4.274e-202 637.0
BYD3_k127_246499_1 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004809 300.0
BYD3_k127_246499_2 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006281 274.0
BYD3_k127_246499_3 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000002112 206.0
BYD3_k127_246499_4 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000001897 198.0
BYD3_k127_246499_5 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000005789 127.0
BYD3_k127_246499_6 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000001696 88.0
BYD3_k127_246499_7 Prokaryotic N-terminal methylation motif K02456,K02650,K02655 - - 0.0000000000003593 76.0
BYD3_k127_246499_8 Tripartite tricarboxylate transporter family receptor - - - 0.0000004544 55.0
BYD3_k127_2588347_0 Domain of unknown function (DUF4143) - - - 8.659e-194 610.0
BYD3_k127_2588347_1 Glycosyl transferase family group 2 K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002936 254.0
BYD3_k127_2588347_2 PFAM NHL repeat containing protein - - - 0.000000000000000000000000001981 119.0
BYD3_k127_2588347_3 Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.0000000001269 64.0
BYD3_k127_25943_0 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 0.0 1153.0
BYD3_k127_25943_1 - - - - 0.0 1078.0
BYD3_k127_25943_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 494.0
BYD3_k127_25943_11 Phospholipase D. Active site motifs. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 426.0
BYD3_k127_25943_12 Pfam:UPF0118 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 389.0
BYD3_k127_25943_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 348.0
BYD3_k127_25943_14 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008409 319.0
BYD3_k127_25943_15 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 311.0
BYD3_k127_25943_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 299.0
BYD3_k127_25943_17 FAD dependent oxidoreductase K00244 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004497 308.0
BYD3_k127_25943_18 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008534 270.0
BYD3_k127_25943_19 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001448 257.0
BYD3_k127_25943_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 1.017e-300 929.0
BYD3_k127_25943_20 Lipoprotein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006266 259.0
BYD3_k127_25943_21 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002508 239.0
BYD3_k127_25943_22 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000001439 232.0
BYD3_k127_25943_23 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000006116 222.0
BYD3_k127_25943_24 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000000000000000000000000006061 233.0
BYD3_k127_25943_25 metal-dependent enzyme of the double-stranded beta helix superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000002459 217.0
BYD3_k127_25943_26 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000001515 226.0
BYD3_k127_25943_27 pfam nudix - - - 0.000000000000000000000000000000000000000000000000000000000002229 214.0
BYD3_k127_25943_28 AlkA N-terminal domain K13529,K13530 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000002566 229.0
BYD3_k127_25943_29 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000001337 224.0
BYD3_k127_25943_3 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 4.691e-242 764.0
BYD3_k127_25943_30 Belongs to the complex I subunit 6 family K00339 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000000000000000000000000000000004338 206.0
BYD3_k127_25943_31 AAA domain K02450 - - 0.0000000000000000000000000000000000000000000000000001421 203.0
BYD3_k127_25943_32 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000001014 186.0
BYD3_k127_25943_33 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000000004135 169.0
BYD3_k127_25943_34 - - - - 0.000000000000000000000000000000000000000000001403 170.0
BYD3_k127_25943_36 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.00000000000000000000000000000000000000006413 154.0
BYD3_k127_25943_37 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000000002893 154.0
BYD3_k127_25943_38 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000003536 151.0
BYD3_k127_25943_39 Thioesterase superfamily K01075 - 3.1.2.23 0.00000000000000000000000000000000000198 145.0
BYD3_k127_25943_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.97e-219 686.0
BYD3_k127_25943_40 - - - - 0.000000000000000000000000000000002381 130.0
BYD3_k127_25943_41 translation release factor activity K03265 - - 0.000000000000000000000000000001272 135.0
BYD3_k127_25943_42 - - - - 0.000000000000000000000000006658 111.0
BYD3_k127_25943_43 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.0000000000000000000000006108 116.0
BYD3_k127_25943_44 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000166 101.0
BYD3_k127_25943_45 Thiamine-binding protein - - - 0.000000000000000000004283 96.0
BYD3_k127_25943_46 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000007629 81.0
BYD3_k127_25943_47 Lysin motif - - - 0.000000001566 70.0
BYD3_k127_25943_48 Peptidoglycan-binding domain 1 protein K07273 - - 0.0000005034 61.0
BYD3_k127_25943_49 phosphoribosyl transferase K07100 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000007305 54.0
BYD3_k127_25943_5 Thiamine pyrophosphate enzyme, central domain - - - 4.057e-217 690.0
BYD3_k127_25943_50 - - - - 0.000008596 49.0
BYD3_k127_25943_6 cellulose binding - - - 1.58e-216 676.0
BYD3_k127_25943_7 Proton-conducting membrane transporter K00342 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1902600,GO:1990204 1.6.5.3 9.694e-200 635.0
BYD3_k127_25943_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009195 508.0
BYD3_k127_25943_9 Glucose / Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 503.0
BYD3_k127_2673208_0 ATPase associated with various cellular activities, AAA_5 K02584 - - 7.604e-214 683.0
BYD3_k127_2673208_1 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 310.0
BYD3_k127_2673208_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003916 278.0
BYD3_k127_2673208_3 ATPase associated with various cellular activities, AAA_5 K02584 - - 0.00000000000000000000000000009643 120.0
BYD3_k127_2673208_4 RESPONSE REGULATOR receiver K02658 - - 0.00000000000000001013 87.0
BYD3_k127_2673208_5 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.000000000000003573 87.0
BYD3_k127_2725758_0 Cache domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001019 267.0
BYD3_k127_2725758_1 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000001231 228.0
BYD3_k127_2725758_2 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000004789 173.0
BYD3_k127_2725758_3 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000008931 172.0
BYD3_k127_2725758_4 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000615 161.0
BYD3_k127_2739548_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 6.368e-230 727.0
BYD3_k127_2739548_1 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 8.057e-196 616.0
BYD3_k127_2739548_10 Major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000002068 188.0
BYD3_k127_2739548_11 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000254 181.0
BYD3_k127_2739548_12 membrane-associated protein K03975 - - 0.00000000000000000000000000001899 126.0
BYD3_k127_2739548_13 Belongs to the ompA family - - - 0.000000000000000005973 94.0
BYD3_k127_2739548_14 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.000000000000001141 82.0
BYD3_k127_2739548_15 Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.0000000000004866 72.0
BYD3_k127_2739548_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 431.0
BYD3_k127_2739548_3 Domain of unknown function (DUF4921) K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005426 350.0
BYD3_k127_2739548_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006207 280.0
BYD3_k127_2739548_5 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000007375 225.0
BYD3_k127_2739548_6 FAD metabolic process K00953,K15429 GO:0003674,GO:0003824,GO:0003919,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006747,GO:0006753,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0042726,GO:0042727,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046443,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0070566,GO:0071704,GO:0071944,GO:0072387,GO:0072388,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.228,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000007653 210.0
BYD3_k127_2739548_7 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.000000000000000000000000000000000000000000000000000000101 205.0
BYD3_k127_2739548_8 [2Fe-2S] binding domain - - - 0.0000000000000000000000000000000000000000000000000000001483 199.0
BYD3_k127_2739548_9 Subtilase family K01342 - 3.4.21.62 0.0000000000000000000000000000000000000000000000000009666 190.0
BYD3_k127_2763735_0 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000002899 233.0
BYD3_k127_2763735_1 Predicted permease K07089 - - 0.0000000000000000000000000000000000005642 146.0
BYD3_k127_2763735_2 Peptidase dimerisation domain K01751 - 4.3.1.15 0.0000000000000003013 85.0
BYD3_k127_2843234_0 GTP-binding protein TypA K06207 - - 6.461e-235 741.0
BYD3_k127_2843234_1 (ABC) transporter K06147,K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 568.0
BYD3_k127_2843234_10 Glycosyl transferases group 1 K12989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 292.0
BYD3_k127_2843234_11 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000006471 251.0
BYD3_k127_2843234_12 PFAM transglutaminase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001218 260.0
BYD3_k127_2843234_13 Putative aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000009302 236.0
BYD3_k127_2843234_14 Methyltransferase domain K00570 - 2.1.1.17,2.1.1.71 0.0000000000000000000000000000000000000000000000008757 182.0
BYD3_k127_2843234_15 Glyoxalase-like domain K06996 - - 0.000000000000000000000000000000000000001149 151.0
BYD3_k127_2843234_16 Mut7-C RNAse domain K09122 - - 0.00000000000000000000000000000001705 132.0
BYD3_k127_2843234_17 PFAM phospholipase Carboxylesterase K06999 - - 0.0000000000000000000000000000001253 136.0
BYD3_k127_2843234_18 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000004077 132.0
BYD3_k127_2843234_19 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000007407 76.0
BYD3_k127_2843234_2 ABC transporter transmembrane K18889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 482.0
BYD3_k127_2843234_20 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.0000000000001643 72.0
BYD3_k127_2843234_21 cell redox homeostasis K03671 - - 0.00000000000131 75.0
BYD3_k127_2843234_22 redox protein, regulator of disulfide bond formation - - - 0.00000005619 61.0
BYD3_k127_2843234_24 Protein involved in outer membrane biogenesis - - - 0.00001391 59.0
BYD3_k127_2843234_25 Helix-turn-helix domain - - - 0.0007807 45.0
BYD3_k127_2843234_3 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead domain K03520 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 426.0
BYD3_k127_2843234_4 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005218 377.0
BYD3_k127_2843234_5 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 380.0
BYD3_k127_2843234_6 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 369.0
BYD3_k127_2843234_7 Putative ATP-binding cassette K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 379.0
BYD3_k127_2843234_8 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 323.0
BYD3_k127_2843234_9 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 293.0
BYD3_k127_2912589_0 TRAP transporter, 4TM 12TM fusion protein - - - 2.958e-274 857.0
BYD3_k127_2912589_1 Tripartite tricarboxylate transporter TctA family K07793 - - 3.856e-243 758.0
BYD3_k127_2912589_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 472.0
BYD3_k127_2912589_3 TRAP transporter, solute receptor (TAXI family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 392.0
BYD3_k127_2912589_4 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000000000000000000000000000000000451 163.0
BYD3_k127_2912589_5 Amidohydrolase K07045 - - 0.0000000000000000000000000000000009795 136.0
BYD3_k127_2912589_6 Amidohydrolase K07045 - - 0.00000000001114 69.0
BYD3_k127_2946482_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 - 4.1.1.98 4.672e-250 780.0
BYD3_k127_2946482_1 spermidine synthase activity K00797 GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 447.0
BYD3_k127_2946482_10 - - - - 0.000000000000000000749 93.0
BYD3_k127_2946482_11 Cupin - - - 0.0009538 45.0
BYD3_k127_2946482_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008805 376.0
BYD3_k127_2946482_3 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000001559 231.0
BYD3_k127_2946482_4 dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000914 203.0
BYD3_k127_2946482_5 Domain of unknown function (DUF1956) - - - 0.000000000000000000000000000000000000000000000000000000136 200.0
BYD3_k127_2946482_6 proteolysis K21140,K21147 - 2.7.7.80,2.8.1.11,3.13.1.6 0.000000000000000000000000000000000000008018 150.0
BYD3_k127_2946482_7 - - - - 0.000000000000000000000000001963 120.0
BYD3_k127_2946482_8 Regulatory protein, FmdB family - - - 0.000000000000000000006134 96.0
BYD3_k127_2946482_9 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.00000000000000000004129 100.0
BYD3_k127_2978257_0 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007169 577.0
BYD3_k127_2978257_1 beta-1,4-mannooligosaccharide phosphorylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 509.0
BYD3_k127_2978257_2 Cyclic nucleotide-monophosphate binding domain K10914 - - 0.00000000000000000000000000000000000000000000000000000000004644 212.0
BYD3_k127_2978257_3 anaphase-promoting complex-dependent catabolic process - - - 0.000000000000000000000000000000000000000000000000002133 186.0
BYD3_k127_2978257_4 Transglycosylase associated protein - - - 0.00000002458 59.0
BYD3_k127_2978257_5 Transcription factor zinc-finger - - - 0.0006682 47.0
BYD3_k127_2991590_0 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009594 531.0
BYD3_k127_2991590_1 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 508.0
BYD3_k127_2991590_10 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000004648 253.0
BYD3_k127_2991590_11 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000008678 231.0
BYD3_k127_2991590_12 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000001493 208.0
BYD3_k127_2991590_13 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000000008067 194.0
BYD3_k127_2991590_14 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000000002016 158.0
BYD3_k127_2991590_15 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000000000000007136 138.0
BYD3_k127_2991590_16 Domain of unknown function (DUF1844) - - - 0.00000000000000000000000004981 113.0
BYD3_k127_2991590_17 peptidyl-tyrosine sulfation - - - 0.00021 52.0
BYD3_k127_2991590_2 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 484.0
BYD3_k127_2991590_3 protein conserved in bacteria K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 451.0
BYD3_k127_2991590_4 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 404.0
BYD3_k127_2991590_5 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005692 383.0
BYD3_k127_2991590_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 350.0
BYD3_k127_2991590_7 Zn-dependent hydrolases of the beta-lactamase fold K13985 - 3.1.4.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 323.0
BYD3_k127_2991590_8 PFAM asparagine synthase K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 302.0
BYD3_k127_2991590_9 major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003938 285.0
BYD3_k127_3003062_0 CHAT domain - - - 0.0 1717.0
BYD3_k127_3003062_1 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 430.0
BYD3_k127_3003062_10 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000003414 153.0
BYD3_k127_3003062_12 Amidohydrolase - - - 0.000000000000000000000000002072 125.0
BYD3_k127_3003062_13 IMP dehydrogenase activity K04767 - - 0.00000000000000000000000001678 114.0
BYD3_k127_3003062_14 Glutathione S-transferase, C-terminal domain - - - 0.0000000000000000000000003846 111.0
BYD3_k127_3003062_2 aldo-keto reductase (NADP) activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 406.0
BYD3_k127_3003062_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003255 269.0
BYD3_k127_3003062_4 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003771 274.0
BYD3_k127_3003062_5 Belongs to the peptidase S51 family K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000004334 270.0
BYD3_k127_3003062_6 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001195 232.0
BYD3_k127_3003062_7 epimerase K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000001434 214.0
BYD3_k127_3003062_8 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000005195 180.0
BYD3_k127_3003062_9 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000001572 141.0
BYD3_k127_3017982_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1802.0
BYD3_k127_3017982_1 Transglycosylase - - - 1.094e-238 773.0
BYD3_k127_3017982_10 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000167 256.0
BYD3_k127_3017982_11 PFAM FAD linked oxidase domain protein K11472 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004454 257.0
BYD3_k127_3017982_12 High-affinity nickel-transport protein K07241 - - 0.000000000000000000000000000000000000000000000000000000000000000000001071 247.0
BYD3_k127_3017982_13 Lysin motif - - - 0.00000000000000000000000000000000000000000000000000000000000000001181 239.0
BYD3_k127_3017982_14 - - - - 0.0000000000000000000000000000000000000000000000000000001941 206.0
BYD3_k127_3017982_15 COG2513 PEP phosphonomutase and related enzymes - - - 0.000000000000000000000000000000000000000000000002467 185.0
BYD3_k127_3017982_16 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000003937 170.0
BYD3_k127_3017982_17 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000001357 160.0
BYD3_k127_3017982_18 High-affinity nickel-transport protein K07241 - - 0.0000000000000000000000000000000000000008637 164.0
BYD3_k127_3017982_19 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000002765 149.0
BYD3_k127_3017982_2 PFAM FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 508.0
BYD3_k127_3017982_20 Amidohydrolase K07045 - - 0.00000000000000000000000000003206 130.0
BYD3_k127_3017982_21 positive regulation of type IV pilus biogenesis K07343 - - 0.000000000000000000000000000643 119.0
BYD3_k127_3017982_22 Protein of unknown function (DUF983) - - - 0.0000000000000000000006502 102.0
BYD3_k127_3017982_23 coenzyme F420-1:gamma-L-glutamate ligase activity K04719 - 1.13.11.79 0.0000000000000001416 85.0
BYD3_k127_3017982_24 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000006101 86.0
BYD3_k127_3017982_25 DNA mediated transformation K04096 - - 0.000000000000009275 83.0
BYD3_k127_3017982_26 Domain of unknown function (DUF4331) - - - 0.00000000000002156 83.0
BYD3_k127_3017982_27 - - - - 0.000000000007884 68.0
BYD3_k127_3017982_28 NMT1-like family - - - 0.00000000003832 74.0
BYD3_k127_3017982_29 Iron-containing redox enzyme K06137 - 1.3.3.11 0.000000001534 67.0
BYD3_k127_3017982_3 Binding-protein-dependent transport system inner membrane component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 494.0
BYD3_k127_3017982_30 NMT1-like family K02051 - - 0.00000000444 67.0
BYD3_k127_3017982_31 Right handed beta helix region - - - 0.00005664 53.0
BYD3_k127_3017982_32 PFAM Nitroreductase - - - 0.0003847 46.0
BYD3_k127_3017982_33 - - - - 0.0008741 42.0
BYD3_k127_3017982_4 ABC-type branched-chain amino acid transport K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007189 423.0
BYD3_k127_3017982_5 4Fe-4S dicluster domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 422.0
BYD3_k127_3017982_6 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 347.0
BYD3_k127_3017982_7 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 303.0
BYD3_k127_3017982_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009355 295.0
BYD3_k127_3017982_9 Domain of unknown function (DUF4331) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003874 290.0
BYD3_k127_3087994_0 Male sterility protein K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000006906 191.0
BYD3_k127_3087994_1 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000001347 180.0
BYD3_k127_3087994_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000009236 149.0
BYD3_k127_3087994_3 - - - - 0.0000000000000000000000000000000000006106 154.0
BYD3_k127_3087994_4 Amidohydrolase K07045 - - 0.0000000000000000000000000000000001535 145.0
BYD3_k127_3087994_5 response regulator - - - 0.0000000000000000003989 92.0
BYD3_k127_3087994_6 Protein of unknown function (DUF3108) - - - 0.00000000000000002911 92.0
BYD3_k127_3087994_7 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000003818 84.0
BYD3_k127_3087994_8 Protein of unknown function (DUF2510) - - - 0.0000000003177 70.0
BYD3_k127_3087994_9 ABC transporter, phosphonate, periplasmic substrate-binding protein K02051 - - 0.00000001192 64.0
BYD3_k127_3109486_0 SWIM zinc finger - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 516.0
BYD3_k127_3109486_1 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 376.0
BYD3_k127_3109486_10 TatD related DNase K03424 - - 0.000000000000000000000000001112 116.0
BYD3_k127_3109486_11 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000001778 104.0
BYD3_k127_3109486_12 EamA-like transporter family - - - 0.0000000000000000002742 98.0
BYD3_k127_3109486_13 COG0286 Type I restriction-modification system methyltransferase subunit K03427 - 2.1.1.72 0.0000000000001338 74.0
BYD3_k127_3109486_14 type I site-specific deoxyribonuclease activity K01153 - 3.1.21.3 0.000000000003325 68.0
BYD3_k127_3109486_15 Redoxin domain protein - - - 0.00000000252 61.0
BYD3_k127_3109486_16 EcoEI R protein C-terminal K01153 - 3.1.21.3 0.00000003134 60.0
BYD3_k127_3109486_18 TatD related DNase K03424 - - 0.0001484 47.0
BYD3_k127_3109486_2 COG0286 Type I restriction-modification system K03427 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009024 274.0
BYD3_k127_3109486_3 A G-specific K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001151 272.0
BYD3_k127_3109486_4 Mechanosensitive ion channel K22044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002714 264.0
BYD3_k127_3109486_5 Psort location CytoplasmicMembrane, score 10.00 - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000005949 207.0
BYD3_k127_3109486_6 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000007584 184.0
BYD3_k127_3109486_7 EcoEI R protein C-terminal K01153 - 3.1.21.3 0.00000000000000000000000000000000000000000000197 166.0
BYD3_k127_3109486_8 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000002441 149.0
BYD3_k127_3109486_9 AhpC/TSA family - - - 0.0000000000000000000000000000004045 124.0
BYD3_k127_3110120_0 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 334.0
BYD3_k127_3110120_1 PFAM Binding-protein-dependent transport K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005484 248.0
BYD3_k127_3110120_2 Ornithine cyclodeaminase K01750 - 4.3.1.12 0.00000000000000000000000000000000000000000006853 177.0
BYD3_k127_3110120_3 PFAM Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000008963 156.0
BYD3_k127_3131132_0 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 399.0
BYD3_k127_3131132_1 Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000008272 251.0
BYD3_k127_3131132_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000001859 177.0
BYD3_k127_3131132_3 CarD-like/TRCF domain K07736 - - 0.000000000000000001716 92.0
BYD3_k127_3144758_0 PFAM Amidohydrolase 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 375.0
BYD3_k127_3144758_1 Cupin 2, conserved barrel domain protein K00450,K11948 - 1.13.11.38,1.13.11.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000111 280.0
BYD3_k127_318502_0 Pfam:UPF0118 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 400.0
BYD3_k127_318502_1 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000005671 153.0
BYD3_k127_3252763_0 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 344.0
BYD3_k127_3252763_1 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000001408 146.0
BYD3_k127_326069_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 1.426e-207 660.0
BYD3_k127_326069_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 589.0
BYD3_k127_326069_10 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000002993 140.0
BYD3_k127_326069_11 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000004742 77.0
BYD3_k127_326069_2 acetolactate synthase K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287 367.0
BYD3_k127_326069_3 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0048033,GO:0048034,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009937 319.0
BYD3_k127_326069_4 Cytochrome oxidase assembly protein K02259,K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003138 284.0
BYD3_k127_326069_5 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000005703 241.0
BYD3_k127_326069_6 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000258 229.0
BYD3_k127_326069_7 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000001459 186.0
BYD3_k127_326069_8 Cytochrome c oxidase, subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000002807 175.0
BYD3_k127_326069_9 Protein of unknown function (DUF420) K08976 - - 0.00000000000000000000000000000000000000001977 158.0
BYD3_k127_3277069_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 6.628e-278 873.0
BYD3_k127_3277069_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.261e-233 737.0
BYD3_k127_3277069_10 Elongator protein 3, MiaB family, Radical SAM K11779 - 2.5.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 541.0
BYD3_k127_3277069_100 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.00004851 54.0
BYD3_k127_3277069_11 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 523.0
BYD3_k127_3277069_12 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 517.0
BYD3_k127_3277069_13 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K14161 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 490.0
BYD3_k127_3277069_14 general L-amino acid-binding periplasmic protein AapJ K09969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 477.0
BYD3_k127_3277069_15 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 476.0
BYD3_k127_3277069_16 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 437.0
BYD3_k127_3277069_17 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 451.0
BYD3_k127_3277069_18 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 434.0
BYD3_k127_3277069_19 COG0765 ABC-type amino acid transport system, permease component K09971 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 424.0
BYD3_k127_3277069_2 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 2.936e-226 712.0
BYD3_k127_3277069_20 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 406.0
BYD3_k127_3277069_21 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 395.0
BYD3_k127_3277069_22 ABC transporter K09013 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0071840 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008702 389.0
BYD3_k127_3277069_23 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 395.0
BYD3_k127_3277069_24 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 387.0
BYD3_k127_3277069_25 PFAM Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 376.0
BYD3_k127_3277069_26 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 372.0
BYD3_k127_3277069_27 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 362.0
BYD3_k127_3277069_28 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 361.0
BYD3_k127_3277069_29 Protein of unknown function (DUF5131) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003849 352.0
BYD3_k127_3277069_3 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 4.611e-211 670.0
BYD3_k127_3277069_30 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 353.0
BYD3_k127_3277069_31 Polysaccharide biosynthesis protein K01784,K08679 - 5.1.3.2,5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007121 347.0
BYD3_k127_3277069_32 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 341.0
BYD3_k127_3277069_33 Cobalamin synthesis protein cobW C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 342.0
BYD3_k127_3277069_34 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000779 336.0
BYD3_k127_3277069_35 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 343.0
BYD3_k127_3277069_36 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 321.0
BYD3_k127_3277069_37 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 319.0
BYD3_k127_3277069_38 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 315.0
BYD3_k127_3277069_39 ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 307.0
BYD3_k127_3277069_4 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008395 591.0
BYD3_k127_3277069_40 Binding-protein-dependent transport system inner membrane component K09970 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 308.0
BYD3_k127_3277069_41 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008595 302.0
BYD3_k127_3277069_42 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 297.0
BYD3_k127_3277069_43 Protein of unknown function (DUF1009) K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 287.0
BYD3_k127_3277069_44 von Willebrand factor (vWF) type A domain K07114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002283 297.0
BYD3_k127_3277069_45 Ornithine cyclodeaminase/mu-crystallin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004755 282.0
BYD3_k127_3277069_46 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005171 269.0
BYD3_k127_3277069_47 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000009383 268.0
BYD3_k127_3277069_48 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002208 257.0
BYD3_k127_3277069_49 PFAM glycosyl transferase family 9 K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006997 256.0
BYD3_k127_3277069_5 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 581.0
BYD3_k127_3277069_50 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000001308 248.0
BYD3_k127_3277069_51 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000006404 242.0
BYD3_k127_3277069_52 peptide deformylase activity K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000003231 237.0
BYD3_k127_3277069_53 O-methyltransferase K00588 - 2.1.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000944 237.0
BYD3_k127_3277069_54 PFAM Glycosyl transferase, group 1 K02844 - - 0.0000000000000000000000000000000000000000000000000000000000000000001101 244.0
BYD3_k127_3277069_55 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000145 217.0
BYD3_k127_3277069_56 Domain of unknown function (DUF1932) - - - 0.00000000000000000000000000000000000000000000000000000000000004507 224.0
BYD3_k127_3277069_57 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553,K14160 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000003782 214.0
BYD3_k127_3277069_58 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000004847 221.0
BYD3_k127_3277069_59 cytidylate kinase activity K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000002687 213.0
BYD3_k127_3277069_6 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003648 575.0
BYD3_k127_3277069_60 Enoyl-(Acyl carrier protein) reductase K00059,K18009,K19548 - 1.1.1.100,1.1.1.304,1.1.1.385,1.1.1.76 0.0000000000000000000000000000000000000000000000000000005535 201.0
BYD3_k127_3277069_61 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000001157 199.0
BYD3_k127_3277069_62 FeS assembly SUF system protein SufT - - - 0.000000000000000000000000000000000000000000000000000006991 195.0
BYD3_k127_3277069_63 Scavenger mRNA decapping enzyme C-term binding K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000001173 181.0
BYD3_k127_3277069_64 Catalyzes the phosphorylation of D-glycero-D-manno- heptose 7-phosphate at the C-1 position to selectively form D- glycero-beta-D-manno-heptose-1,7-bisphosphate K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000001666 181.0
BYD3_k127_3277069_65 tigr00255 - - - 0.0000000000000000000000000000000000000000000000003856 186.0
BYD3_k127_3277069_66 SUF system FeS assembly protein K04488 - - 0.0000000000000000000000000000000000000000000000008692 183.0
BYD3_k127_3277069_67 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000423 176.0
BYD3_k127_3277069_68 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.0000000000000000000000000000000000000000000001572 181.0
BYD3_k127_3277069_69 Phage integrase, N-terminal SAM-like domain - - - 0.000000000000000000000000000000000000000000000347 168.0
BYD3_k127_3277069_7 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 569.0
BYD3_k127_3277069_70 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000004662 175.0
BYD3_k127_3277069_71 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000005939 171.0
BYD3_k127_3277069_72 cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000499 172.0
BYD3_k127_3277069_73 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000002993 175.0
BYD3_k127_3277069_74 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.000000000000000000000000000000000000000001345 162.0
BYD3_k127_3277069_75 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000448 164.0
BYD3_k127_3277069_76 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000000001468 158.0
BYD3_k127_3277069_77 Pfam:DUF59 K02612 - - 0.00000000000000000000000000000000000000004974 153.0
BYD3_k127_3277069_78 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000004014 156.0
BYD3_k127_3277069_79 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000003022 151.0
BYD3_k127_3277069_8 Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 549.0
BYD3_k127_3277069_80 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000001039 151.0
BYD3_k127_3277069_81 3-demethylubiquinone-9 3-O-methyltransferase activity K20444 - - 0.00000000000000000000000000000000002843 143.0
BYD3_k127_3277069_82 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000003418 141.0
BYD3_k127_3277069_83 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000128 130.0
BYD3_k127_3277069_84 COG2346, Truncated hemoglobins K06886 - - 0.0000000000000000000000000002708 119.0
BYD3_k127_3277069_85 Glycosyl transferase family group 2 - - - 0.000000000000000000000000001357 123.0
BYD3_k127_3277069_86 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009889,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2001141 - 0.000000000000000000000000002347 115.0
BYD3_k127_3277069_87 kinase activity - - - 0.0000000000000000000000002216 116.0
BYD3_k127_3277069_88 cellular response to dsDNA K11211 - 2.7.1.166 0.0000000000000000000000002902 115.0
BYD3_k127_3277069_89 - - - - 0.000000000000000000000004474 111.0
BYD3_k127_3277069_9 Protein of unknown function (DUF1214) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 541.0
BYD3_k127_3277069_90 addiction module antidote protein HigA K21498 - - 0.0000000000000000000006487 98.0
BYD3_k127_3277069_91 Belongs to the UPF0434 family K09791 - - 0.00000000000000000000271 98.0
BYD3_k127_3277069_92 - - - - 0.0000000000000000009512 95.0
BYD3_k127_3277069_93 Transcriptional regulator - - - 0.00000000000000000271 94.0
BYD3_k127_3277069_94 Outer membrane protein (OmpH-like) K06142 - - 0.0000000000000351 79.0
BYD3_k127_3277069_95 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000004131 74.0
BYD3_k127_3277069_96 NMT1-like family K02051 - - 0.0000000001675 69.0
BYD3_k127_3277069_97 - - - - 0.0000000006541 64.0
BYD3_k127_3277069_99 Subtilase family - - - 0.000001239 59.0
BYD3_k127_3329062_0 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007529 533.0
BYD3_k127_3329062_1 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 541.0
BYD3_k127_3329062_2 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009743 360.0
BYD3_k127_3329062_3 SurA N-terminal domain K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000006698 269.0
BYD3_k127_3329062_4 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000002436 180.0
BYD3_k127_3329062_5 Belongs to the thioredoxin family K03671 - - 0.000000000001429 68.0
BYD3_k127_3329062_6 rod shape-determining protein MreD K03571 - - 0.00041 49.0
BYD3_k127_3435870_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000004418 115.0
BYD3_k127_3435870_1 PFAM phosphate-selective porin O and P K07221 - - 0.0006812 52.0
BYD3_k127_349755_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019904,GO:0022607,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043335,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 6.245e-194 616.0
BYD3_k127_349755_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 601.0
BYD3_k127_349755_10 Fibronectin type 3 domain - - - 0.000000003952 63.0
BYD3_k127_349755_2 PFAM fumarate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008571 571.0
BYD3_k127_349755_3 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008474 497.0
BYD3_k127_349755_4 Amino acid kinase family K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 384.0
BYD3_k127_349755_5 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 363.0
BYD3_k127_349755_6 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001674 273.0
BYD3_k127_349755_7 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000003024 262.0
BYD3_k127_349755_8 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000002057 160.0
BYD3_k127_349755_9 Alpha beta-Hydrolases superfamily protein K06889 - - 0.00000000000000000000000005144 117.0
BYD3_k127_3600865_0 PFAM major facilitator superfamily MFS_1 K03446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 361.0
BYD3_k127_3600865_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000355 123.0
BYD3_k127_3600865_2 Major facilitator Superfamily - - - 0.00000000000000000000000008267 121.0
BYD3_k127_3600865_3 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000006716 54.0
BYD3_k127_3620069_0 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 477.0
BYD3_k127_3620069_1 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007826 318.0
BYD3_k127_3620069_10 bleomycin resistance protein - - - 0.0000009965 56.0
BYD3_k127_3620069_11 amidohydrolase - - - 0.0001992 50.0
BYD3_k127_3620069_2 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004696 314.0
BYD3_k127_3620069_3 TIM-barrel fold metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001406 279.0
BYD3_k127_3620069_4 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000048 268.0
BYD3_k127_3620069_5 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000419 248.0
BYD3_k127_3620069_6 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000006366 248.0
BYD3_k127_3620069_7 PFAM amidohydrolase K07045 - - 0.000000000000000000000000000000001054 142.0
BYD3_k127_3620069_8 COG0346 Lactoylglutathione lyase and related lyases - - - 0.0000000000000003361 83.0
BYD3_k127_3620069_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000005747 79.0
BYD3_k127_3620175_0 UvrD/REP helicase N-terminal domain - - - 4.735e-294 942.0
BYD3_k127_3620175_1 xanthine dehydrogenase activity K03520 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005493 626.0
BYD3_k127_3620175_10 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 337.0
BYD3_k127_3620175_11 Alpha/beta hydrolase of unknown function (DUF1100) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 317.0
BYD3_k127_3620175_12 TIGRFAM LPPG domain protein containing protein K11212 - 2.7.8.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007738 309.0
BYD3_k127_3620175_13 Aldo/keto reductase family K00002 - 1.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004019 291.0
BYD3_k127_3620175_14 Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002825 251.0
BYD3_k127_3620175_15 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000017 244.0
BYD3_k127_3620175_16 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.000000000000000000000000000000000000000000000000000000000000000001649 235.0
BYD3_k127_3620175_17 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000001654 234.0
BYD3_k127_3620175_18 COGs COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS CutS homologs K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000003862 229.0
BYD3_k127_3620175_19 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000002413 202.0
BYD3_k127_3620175_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 559.0
BYD3_k127_3620175_20 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000004038 205.0
BYD3_k127_3620175_21 - - - - 0.00000000000000000000000000000000000000000000000000001045 192.0
BYD3_k127_3620175_22 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000002206 192.0
BYD3_k127_3620175_23 Transmembrane secretion effector K08225 - - 0.00000000000000000000000000000000000000000000000000284 198.0
BYD3_k127_3620175_24 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K00652,K01935 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004141,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017076,GO:0017144,GO:0018130,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.47,6.3.3.3 0.0000000000000000000000000000000000000000000000003118 184.0
BYD3_k127_3620175_25 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.0000000000000000000000000000000000000000000008478 171.0
BYD3_k127_3620175_26 NADPH-dependent f420 reductase K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000004727 167.0
BYD3_k127_3620175_27 TIM-barrel fold metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000002648 161.0
BYD3_k127_3620175_28 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00330 - 1.6.5.3 0.000000000000000000000000000000000000005344 149.0
BYD3_k127_3620175_29 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000006186 145.0
BYD3_k127_3620175_3 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 568.0
BYD3_k127_3620175_30 Amidohydrolase - - - 0.000000000000000000000000000000000008768 142.0
BYD3_k127_3620175_31 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000002249 129.0
BYD3_k127_3620175_32 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000005341 123.0
BYD3_k127_3620175_33 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000000000001037 113.0
BYD3_k127_3620175_34 Protein of unknown function (DUF3568) - - - 0.0000000000000000000007369 100.0
BYD3_k127_3620175_35 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000002749 99.0
BYD3_k127_3620175_36 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 - 2.7.7.68 0.000000000000000002235 94.0
BYD3_k127_3620175_38 - - - - 0.00000000000003768 75.0
BYD3_k127_3620175_39 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000008631 80.0
BYD3_k127_3620175_4 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 501.0
BYD3_k127_3620175_40 COG3857 ATP-dependent nuclease, subunit B K16899 - 3.6.4.12 0.0000000147 69.0
BYD3_k127_3620175_41 Putative zinc-finger - - - 0.00001692 55.0
BYD3_k127_3620175_42 iron ion binding - - - 0.00005303 47.0
BYD3_k127_3620175_43 Bacterial type II and III secretion system protein - - - 0.0001613 52.0
BYD3_k127_3620175_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 471.0
BYD3_k127_3620175_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 427.0
BYD3_k127_3620175_7 Elongator protein 3, MiaB family, Radical SAM K11779 - 2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006553 424.0
BYD3_k127_3620175_8 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652,K01906 - 2.3.1.29,2.3.1.47,6.2.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 399.0
BYD3_k127_3620175_9 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 380.0
BYD3_k127_374872_0 ATP-dependent helicase C-terminal K03579 - 3.6.4.13 7.52e-320 1001.0
BYD3_k127_374872_1 DNA topoisomerase II activity K03167 - 5.99.1.3 1.675e-299 933.0
BYD3_k127_374872_10 PFAM Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 466.0
BYD3_k127_374872_11 Binding-protein-dependent transport system inner membrane component K02033,K15585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 428.0
BYD3_k127_374872_12 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005848 428.0
BYD3_k127_374872_13 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007682 359.0
BYD3_k127_374872_14 PFAM Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005536 334.0
BYD3_k127_374872_15 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 314.0
BYD3_k127_374872_16 Amidohydrolase family K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000003226 272.0
BYD3_k127_374872_18 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000006223 237.0
BYD3_k127_374872_19 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000007247 228.0
BYD3_k127_374872_2 PFAM Prolyl oligopeptidase family - - - 1.701e-283 885.0
BYD3_k127_374872_20 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000006625 235.0
BYD3_k127_374872_21 Protein of unknown function (DUF3014) - - - 0.00000000000000000000000000000000000000000000000000000000000007629 222.0
BYD3_k127_374872_22 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000005746 226.0
BYD3_k127_374872_23 response to heat K07090 - - 0.00000000000000000000000000000000000000000000000000000001058 206.0
BYD3_k127_374872_24 AAA domain, putative AbiEii toxin, Type IV TA system K02028 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000006428 200.0
BYD3_k127_374872_25 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000004517 191.0
BYD3_k127_374872_26 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K07025 - - 0.0000000000000000000000000000000000000000000000000463 186.0
BYD3_k127_374872_27 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000001642 189.0
BYD3_k127_374872_28 RES - - - 0.0000000000000000000000000000000000000000000006108 170.0
BYD3_k127_374872_29 Phosphoesterase K07098 - - 0.000000000000000000000000000001292 134.0
BYD3_k127_374872_3 Bacterial protein of unknown function (DUF853) - - - 3.047e-224 703.0
BYD3_k127_374872_30 Protein of unknown function (DUF2384) - - - 0.000000000000000000000000000003143 124.0
BYD3_k127_374872_31 DNA repair exonuclease - - - 0.00000000000003214 82.0
BYD3_k127_374872_32 Acetyltransferase (GNAT) domain K03825 - - 0.0000000000003049 72.0
BYD3_k127_374872_33 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000001924 78.0
BYD3_k127_374872_34 NMT1-like family K02051 - - 0.0000000008662 70.0
BYD3_k127_374872_35 synthase K01719 - 4.2.1.75 0.00000006123 56.0
BYD3_k127_374872_4 DNA topoisomerase VI subunit A K03166 - 5.99.1.3 1.34e-202 635.0
BYD3_k127_374872_5 Protein of unknown function (DUF763) K09003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 599.0
BYD3_k127_374872_6 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 606.0
BYD3_k127_374872_7 Bacterial periplasmic substrate-binding proteins K02029,K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 570.0
BYD3_k127_374872_8 Animal haem peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006017 566.0
BYD3_k127_374872_9 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 484.0
BYD3_k127_3806234_0 glycosyl transferase family 8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 421.0
BYD3_k127_3806234_1 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 312.0
BYD3_k127_3806234_10 protein transport across the cell outer membrane K02246,K08084 - - 0.00000000007862 68.0
BYD3_k127_3806234_11 type IV pilus modification protein PilV K02458,K02671 - - 0.00000000012 70.0
BYD3_k127_3806234_12 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000001388 64.0
BYD3_k127_3806234_13 Protein of unknown function (DUF1232) - - - 0.0000000003068 64.0
BYD3_k127_3806234_14 pilus assembly protein PilW - - - 0.000000005089 65.0
BYD3_k127_3806234_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007124 321.0
BYD3_k127_3806234_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 292.0
BYD3_k127_3806234_4 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000007091 267.0
BYD3_k127_3806234_5 peptidoglycan biosynthetic process K03980,K21004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001741 263.0
BYD3_k127_3806234_6 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003748 252.0
BYD3_k127_3806234_7 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003878 253.0
BYD3_k127_3806234_8 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000001141 211.0
BYD3_k127_3806234_9 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000004068 81.0
BYD3_k127_3820806_0 Tripartite tricarboxylate transporter TctA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 470.0
BYD3_k127_3820806_1 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007073 466.0
BYD3_k127_3820806_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000002264 207.0
BYD3_k127_3820806_3 protein conserved in bacteria - - - 0.000000000000000000000000000000000000001262 158.0
BYD3_k127_3951217_0 Ion transport 2 domain protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 308.0
BYD3_k127_3955139_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 2.501e-291 900.0
BYD3_k127_3955139_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.333e-215 699.0
BYD3_k127_3955139_10 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000007941 223.0
BYD3_k127_3955139_11 Thiopurine S-methyltransferase (TPMT) - - - 0.000000000000000000000000000000000000000000000000000005693 196.0
BYD3_k127_3955139_12 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000006351 197.0
BYD3_k127_3955139_13 - - - - 0.00000000000000000000000000000000000000000000000486 174.0
BYD3_k127_3955139_14 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000001715 169.0
BYD3_k127_3955139_15 EamA-like transporter family - - - 0.00000000000000000000000000000000000001352 151.0
BYD3_k127_3955139_16 RNA recognition motif - - - 0.00000000000000000000000000000000000002442 145.0
BYD3_k127_3955139_17 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000211 140.0
BYD3_k127_3955139_18 PFAM Bacterial regulatory proteins, gntR family - - - 0.00000000000000000000000000000001399 136.0
BYD3_k127_3955139_19 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000000000000000003716 129.0
BYD3_k127_3955139_2 mechanosensitive ion channel activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005412 583.0
BYD3_k127_3955139_20 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000001236 123.0
BYD3_k127_3955139_21 EamA-like transporter family - - - 0.00000000000000000000000002583 116.0
BYD3_k127_3955139_23 AhpC/TSA antioxidant enzyme - - - 0.000000000000000000002604 98.0
BYD3_k127_3955139_24 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000002774 96.0
BYD3_k127_3955139_25 - - - - 0.00000000000000009939 84.0
BYD3_k127_3955139_27 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08234 - - 0.000000000000007962 79.0
BYD3_k127_3955139_28 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.0000000003366 65.0
BYD3_k127_3955139_29 ABC transporter, phosphonate, periplasmic substrate-binding protein K02051 - - 0.0000000479 64.0
BYD3_k127_3955139_3 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005665 346.0
BYD3_k127_3955139_30 EamA-like transporter family - - - 0.000001527 59.0
BYD3_k127_3955139_31 PFAM NMT1 THI5 like domain protein K02051 - - 0.00004753 55.0
BYD3_k127_3955139_32 conserved protein, contains double-stranded beta-helix domain - - - 0.00008006 51.0
BYD3_k127_3955139_4 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007705 346.0
BYD3_k127_3955139_5 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 325.0
BYD3_k127_3955139_6 Carbon-nitrogen hydrolase K11206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005379 291.0
BYD3_k127_3955139_7 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000007316 229.0
BYD3_k127_3955139_8 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000008098 223.0
BYD3_k127_3955139_9 arginyltransferase activity K21420 GO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019538,GO:0019941,GO:0030163,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000001656 216.0
BYD3_k127_3970302_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 7.066e-261 815.0
BYD3_k127_3970302_1 PFAM Aldehyde dehydrogenase family K00128,K00135,K00146,K22187 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.39,1.2.1.79 2.739e-223 701.0
BYD3_k127_3970302_10 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008864 317.0
BYD3_k127_3970302_11 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 304.0
BYD3_k127_3970302_12 PFAM Nucleotidyl transferase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006004 305.0
BYD3_k127_3970302_13 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 296.0
BYD3_k127_3970302_14 PFAM Nitrile hydratase alpha K01721 - 4.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001324 278.0
BYD3_k127_3970302_15 tRNA methyltransferase complex GCD14 subunit N-term K07442 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016426,GO:0016429,GO:0016740,GO:0016741,GO:0030488,GO:0031515,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.219,2.1.1.220 0.000000000000000000000000000000000000000000000000000000000000000000000000000001933 270.0
BYD3_k127_3970302_16 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002355 252.0
BYD3_k127_3970302_17 PAC2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001251 241.0
BYD3_k127_3970302_18 MlaA lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000000000000000002131 239.0
BYD3_k127_3970302_19 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000005624 230.0
BYD3_k127_3970302_2 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 4.987e-211 679.0
BYD3_k127_3970302_20 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000000000000000000000000000006212 219.0
BYD3_k127_3970302_21 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000302 206.0
BYD3_k127_3970302_22 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050 - - 0.00000000000000000000000000000000000000000000000000001904 198.0
BYD3_k127_3970302_23 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000004357 200.0
BYD3_k127_3970302_24 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000004816 194.0
BYD3_k127_3970302_25 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000001586 186.0
BYD3_k127_3970302_26 deacetylase K22278 - 3.5.1.104 0.00000000000000000000000000000000000000000001959 174.0
BYD3_k127_3970302_27 photosynthesis - - - 0.00000000000000000000000000000000000000000004971 165.0
BYD3_k127_3970302_28 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.00000000000000000000000002594 110.0
BYD3_k127_3970302_29 Response regulator receiver K02483,K07658,K07668 - - 0.000000000000000000000003781 106.0
BYD3_k127_3970302_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 517.0
BYD3_k127_3970302_30 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.00000000000000000000002009 104.0
BYD3_k127_3970302_31 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.00000000000000000009274 96.0
BYD3_k127_3970302_32 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 GO:0003674,GO:0005215 - 0.000000000004672 77.0
BYD3_k127_3970302_4 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 484.0
BYD3_k127_3970302_5 Tripartite tricarboxylate transporter TctA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 487.0
BYD3_k127_3970302_6 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 430.0
BYD3_k127_3970302_7 Belongs to the UbiD family K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 395.0
BYD3_k127_3970302_8 Peptidase M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 375.0
BYD3_k127_3970302_9 PFAM Chlorite dismutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008555 332.0
BYD3_k127_3991026_0 PFAM type II secretion system protein G K02456 - - 0.000000000000000000000000000000000000000000000001021 177.0
BYD3_k127_3991026_1 Type II secretion system (T2SS), protein K K02460 - - 0.0000000000000000000000000000000000000002841 163.0
BYD3_k127_3991026_2 Fimbrial assembly protein (PilN) K02461 - - 0.0000000000000000000000109 116.0
BYD3_k127_3991026_3 type II and III secretion system protein K02453 - - 0.00000000000000000002542 100.0
BYD3_k127_3991026_4 Type II transport protein GspH K02457 - - 0.0000000001969 69.0
BYD3_k127_3991026_5 Prokaryotic N-terminal methylation motif K02458 - - 0.000000004214 63.0
BYD3_k127_3991026_6 Type II secretion system (T2SS), protein M subtype b K02462 - - 0.0000008369 60.0
BYD3_k127_3991026_7 protein transport across the cell outer membrane K02246,K02457,K02459,K02672,K08084 - - 0.0001377 52.0
BYD3_k127_400783_0 protein involved in outer membrane biogenesis K07290 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 433.0
BYD3_k127_400783_1 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.000000000000000000000000000000000000000000000000000000000000000003733 229.0
BYD3_k127_405386_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537,K01539 - 3.6.3.8,3.6.3.9 0.0 1344.0
BYD3_k127_405386_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.034e-247 779.0
BYD3_k127_405386_10 3'-5' exonuclease K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000001125 246.0
BYD3_k127_405386_11 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000004328 217.0
BYD3_k127_405386_12 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000000000000001922 194.0
BYD3_k127_405386_13 - - - - 0.00000000000000000000000000000000000000000000000273 181.0
BYD3_k127_405386_14 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000000000000000000001882 173.0
BYD3_k127_405386_15 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000003419 161.0
BYD3_k127_405386_16 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000392 155.0
BYD3_k127_405386_17 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000009421 141.0
BYD3_k127_405386_18 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000146 146.0
BYD3_k127_405386_19 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000004319 136.0
BYD3_k127_405386_2 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain K00261,K00262 - 1.4.1.3,1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 512.0
BYD3_k127_405386_20 ribosomal large subunit export from nucleus - - - 0.000000000000000000000000000002539 128.0
BYD3_k127_405386_21 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.00000000000000000000000000005385 120.0
BYD3_k127_405386_22 Universal stress protein - - - 0.0000000000000000004144 92.0
BYD3_k127_405386_23 - - - - 0.000000000661 61.0
BYD3_k127_405386_3 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00169,K19070 GO:0003674,GO:0003824,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003803 480.0
BYD3_k127_405386_4 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00170 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005321 395.0
BYD3_k127_405386_5 PFAM Acyl-CoA dehydrogenase K16173 - 1.3.99.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004924 385.0
BYD3_k127_405386_6 PFAM formate nitrite transporter K06212,K21993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 349.0
BYD3_k127_405386_7 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 344.0
BYD3_k127_405386_8 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001819 285.0
BYD3_k127_405386_9 Adenosine specific kinase K09129 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000462 257.0
BYD3_k127_4237434_0 TIGRFAM molybdenum cofactor synthesis K03750,K07219 - 2.10.1.1 5.818e-205 656.0
BYD3_k127_4237434_1 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 562.0
BYD3_k127_4237434_10 NMT1-like family - - - 0.000000000000000000000000000000000000000001791 168.0
BYD3_k127_4237434_11 Pfam:DUF59 K02612 - - 0.000000000000000000000000000000000000422 145.0
BYD3_k127_4237434_12 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.0000000000000000000000000000000000008697 153.0
BYD3_k127_4237434_13 Belongs to the ompA family K03286 - - 0.0000000000000000000000005531 114.0
BYD3_k127_4237434_14 Glycine cleavage H-protein - - - 0.0000000000000000001032 91.0
BYD3_k127_4237434_2 Na+-transporting oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 519.0
BYD3_k127_4237434_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 398.0
BYD3_k127_4237434_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 378.0
BYD3_k127_4237434_5 TIGRFAM molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 362.0
BYD3_k127_4237434_6 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004426 286.0
BYD3_k127_4237434_7 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003187 254.0
BYD3_k127_4237434_8 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000002295 228.0
BYD3_k127_4237434_9 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000001274 177.0
BYD3_k127_4266783_0 Belongs to the UbiD family K01612 - 4.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 567.0
BYD3_k127_4266783_1 Belongs to the UbiD family K03182,K16874 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 459.0
BYD3_k127_4266783_2 Tripartite tricarboxylate transporter TctA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006571 433.0
BYD3_k127_4266783_3 Pfam Cupin K00450,K11948 - 1.13.11.38,1.13.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000346 273.0
BYD3_k127_4266783_4 Cupin domain - - - 0.000000000000000000000000000000001625 131.0
BYD3_k127_4266783_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000001152 125.0
BYD3_k127_4266783_6 NMT1-like family K15553 - - 0.000004444 58.0
BYD3_k127_4266783_7 Tripartite tricarboxylate transporter TctB family - - - 0.0002091 50.0
BYD3_k127_4266783_8 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0003691 51.0
BYD3_k127_4333473_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 593.0
BYD3_k127_4333473_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004771 525.0
BYD3_k127_4333473_10 Catalyzes the oxidation of methyl-H(4)MPT to methylene- H(4)MPT K00320 - 1.5.98.2 0.0000000000000000000001684 109.0
BYD3_k127_4333473_11 NMT1-like family K02051 - - 0.000000000000002193 88.0
BYD3_k127_4333473_12 D-alanyl-D-alanine carboxypeptidase K17733 - - 0.0000000000005382 79.0
BYD3_k127_4333473_13 LysM domain - - - 0.000000000009822 78.0
BYD3_k127_4333473_14 YCII-related domain K09780 - - 0.0000000001567 71.0
BYD3_k127_4333473_15 Cysteine dioxygenase type I - - - 0.00000008636 63.0
BYD3_k127_4333473_16 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08234 - - 0.0000001243 62.0
BYD3_k127_4333473_17 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.000004287 59.0
BYD3_k127_4333473_18 Belongs to the ompA family - - - 0.00004621 50.0
BYD3_k127_4333473_19 NMT1/THI5 like - - - 0.0001078 54.0
BYD3_k127_4333473_2 PFAM Cys Met metabolism pyridoxal-phosphate-dependent K01739 - 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 464.0
BYD3_k127_4333473_20 conserved protein, contains double-stranded beta-helix domain - - - 0.0001846 49.0
BYD3_k127_4333473_3 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 433.0
BYD3_k127_4333473_4 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 346.0
BYD3_k127_4333473_5 ornithine cyclodeaminase K01750 - 4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 337.0
BYD3_k127_4333473_6 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007874 252.0
BYD3_k127_4333473_7 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001388 231.0
BYD3_k127_4333473_8 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000002286 225.0
BYD3_k127_4333473_9 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000002202 176.0
BYD3_k127_4390867_0 protein histidine kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 439.0
BYD3_k127_4390867_1 PA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 366.0
BYD3_k127_4390867_10 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins - - - 0.0000000000001032 72.0
BYD3_k127_4390867_11 NMT1-like family K02051 - - 0.0002146 49.0
BYD3_k127_4390867_2 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 311.0
BYD3_k127_4390867_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001662 283.0
BYD3_k127_4390867_4 phosphatidylcholine synthase activity K01004,K17103 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050520,GO:0071704,GO:0090407,GO:1901576 2.7.8.24,2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000004535 238.0
BYD3_k127_4390867_5 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000134 210.0
BYD3_k127_4390867_6 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000001915 213.0
BYD3_k127_4390867_7 Glutathione S-transferase - - - 0.0000000000000000000000000000002294 130.0
BYD3_k127_4390867_8 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000003929 113.0
BYD3_k127_4390867_9 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000199 111.0
BYD3_k127_4421131_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1176.0
BYD3_k127_4421131_1 Leucyl-tRNA synthetase, Domain 2 K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1150.0
BYD3_k127_4421131_10 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 355.0
BYD3_k127_4421131_11 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 344.0
BYD3_k127_4421131_12 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 317.0
BYD3_k127_4421131_13 SMART Elongator protein 3 MiaB NifB K07139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 308.0
BYD3_k127_4421131_14 Phage integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007551 307.0
BYD3_k127_4421131_15 reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003188 273.0
BYD3_k127_4421131_16 ATP cone domain K07738 - - 0.000000000000000000000000000000000000000000000000000000000001614 213.0
BYD3_k127_4421131_17 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000459 198.0
BYD3_k127_4421131_18 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0040007,GO:0042886,GO:0042887,GO:0043953,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.000000000000000000000000000000000000000000000000000002363 199.0
BYD3_k127_4421131_19 Lumazine binding domain K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000002383 191.0
BYD3_k127_4421131_2 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 4.162e-303 943.0
BYD3_k127_4421131_20 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.000000000000000000000000000000000000000000000000435 181.0
BYD3_k127_4421131_21 TIGRFAM sugar-phosphate isomerase, RpiB LacA LacB family K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000009355 181.0
BYD3_k127_4421131_22 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000002868 178.0
BYD3_k127_4421131_23 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000005138 177.0
BYD3_k127_4421131_24 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000001154 166.0
BYD3_k127_4421131_25 Crossover junction endodeoxyribonuclease RuvC K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000000004213 158.0
BYD3_k127_4421131_26 acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.000000000000000000000000000000000001706 142.0
BYD3_k127_4421131_27 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000007954 130.0
BYD3_k127_4421131_28 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000003196 106.0
BYD3_k127_4421131_29 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000004132 112.0
BYD3_k127_4421131_3 histidine kinase, HAMP K13598 - 2.7.13.3 1.446e-209 674.0
BYD3_k127_4421131_30 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000000000141 96.0
BYD3_k127_4421131_31 Protein of unknown function (DUF2905) - - - 0.00000000000000000004297 91.0
BYD3_k127_4421131_32 Ribosomal L32p protein family K02911 - - 0.00000000000000004548 82.0
BYD3_k127_4421131_33 Lipopolysaccharide-assembly - - - 0.000000000004383 74.0
BYD3_k127_4421131_35 Binds directly to 16S ribosomal RNA K02968 - - 0.0000001777 56.0
BYD3_k127_4421131_36 thiamine-containing compound biosynthetic process K02051 - - 0.00003664 51.0
BYD3_k127_4421131_4 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.377e-196 620.0
BYD3_k127_4421131_5 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 479.0
BYD3_k127_4421131_6 Holliday junction DNA helicase ruvB C-terminus K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009944 467.0
BYD3_k127_4421131_7 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008631 464.0
BYD3_k127_4421131_8 UDP-3-O-acyl N-acetylglycosamine deacetylase K02535,K13599 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 390.0
BYD3_k127_4421131_9 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 362.0
BYD3_k127_4519507_0 PFAM FAD linked oxidase domain protein - - - 3e-323 1015.0
BYD3_k127_4519507_1 succinate dehydrogenase, flavoprotein subunit K00239 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4 3.309e-287 893.0
BYD3_k127_4519507_10 deaminated base DNA N-glycosylase activity K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033958,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005865 282.0
BYD3_k127_4519507_11 Ornithine cyclodeaminase/mu-crystallin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001737 286.0
BYD3_k127_4519507_12 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000001939 220.0
BYD3_k127_4519507_13 KR domain K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.0000000000000000000000000000000000000000000000000001277 195.0
BYD3_k127_4519507_14 arsenate reductase (glutaredoxin) activity K00537 - 1.20.4.1 0.000000000003932 70.0
BYD3_k127_4519507_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 4.424e-203 675.0
BYD3_k127_4519507_3 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 579.0
BYD3_k127_4519507_4 twitching motility protein K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 516.0
BYD3_k127_4519507_5 Belongs to the aldehyde dehydrogenase family K00135,K22445 - 1.2.1.16,1.2.1.20,1.2.1.79,1.2.99.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 466.0
BYD3_k127_4519507_6 Succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004964 381.0
BYD3_k127_4519507_7 SAICAR synthetase K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 347.0
BYD3_k127_4519507_8 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 340.0
BYD3_k127_4519507_9 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 288.0
BYD3_k127_4549113_0 KaiC K08482 - - 1.79e-230 726.0
BYD3_k127_4549113_1 glutamate--cysteine ligase K01919 - 6.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 402.0
BYD3_k127_4549113_10 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000008295 176.0
BYD3_k127_4549113_11 Protein of unknown function (DUF3568) - - - 0.000000000000000000000004445 106.0
BYD3_k127_4549113_12 - - - - 0.000000000000000000001181 99.0
BYD3_k127_4549113_13 - - - - 0.00000000000000000005153 100.0
BYD3_k127_4549113_14 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.000000002229 61.0
BYD3_k127_4549113_15 hmm pf01609 - - - 0.000003312 54.0
BYD3_k127_4549113_16 GTP binding - - - 0.0000168 52.0
BYD3_k127_4549113_17 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00003149 46.0
BYD3_k127_4549113_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 395.0
BYD3_k127_4549113_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 403.0
BYD3_k127_4549113_4 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008497 334.0
BYD3_k127_4549113_5 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 314.0
BYD3_k127_4549113_6 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006903 246.0
BYD3_k127_4549113_7 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000001722 251.0
BYD3_k127_4549113_8 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000002805 246.0
BYD3_k127_4549113_9 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000000002721 200.0
BYD3_k127_4626709_0 Type II IV secretion system protein K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000073 559.0
BYD3_k127_4626709_1 involved in lipopolysaccharide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 434.0
BYD3_k127_4626709_2 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009587 348.0
BYD3_k127_4626709_3 Type II secretion system K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006475 336.0
BYD3_k127_4626709_4 Mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000000000005721 148.0
BYD3_k127_4626709_5 Lipid A core - O-antigen ligase K18814 - - 0.00000000000000000007297 102.0
BYD3_k127_4626709_6 Type II secretion system (T2SS), protein G K02456 - - 0.0004874 46.0
BYD3_k127_4676670_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1071.0
BYD3_k127_4676670_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 3.422e-201 633.0
BYD3_k127_4676670_10 PFAM Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 366.0
BYD3_k127_4676670_11 Protein of unknown function (DUF3500) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255 342.0
BYD3_k127_4676670_12 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 346.0
BYD3_k127_4676670_13 Acetamidase/Formamidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 295.0
BYD3_k127_4676670_14 maleylacetoacetate isomerase K01800,K01801 - 5.2.1.2,5.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004991 278.0
BYD3_k127_4676670_15 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000228 280.0
BYD3_k127_4676670_16 protein related to plant photosystem II stability assembly factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005808 271.0
BYD3_k127_4676670_17 KR domain K03366 - 1.1.1.304,1.1.1.76 0.000000000000000000000000000000000000000000000000000000000000000000000000000166 265.0
BYD3_k127_4676670_18 3-demethylubiquinone-9 3-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000001001 230.0
BYD3_k127_4676670_19 Rieske [2Fe-2S] domain K15060 - - 0.000000000000000000000000000000000000000000000000000000000000002193 234.0
BYD3_k127_4676670_2 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01577,K01652,K03852 - 2.2.1.6,2.3.3.15,4.1.1.8 1.199e-194 621.0
BYD3_k127_4676670_20 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000603 195.0
BYD3_k127_4676670_21 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.000000000000000000000000000000000000000000000000000002011 196.0
BYD3_k127_4676670_22 Mycolic acid cyclopropane synthetase K00574,K20238 - 2.1.1.317,2.1.1.79 0.0000000000000000000000000000000000000000004279 161.0
BYD3_k127_4676670_23 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000002756 158.0
BYD3_k127_4676670_24 YCII-related domain - - - 0.0000000000000000000000000000000000001257 145.0
BYD3_k127_4676670_25 Mycolic acid cyclopropane synthetase K00574,K20238 - 2.1.1.317,2.1.1.79 0.0000000000000000000000000000000000008406 152.0
BYD3_k127_4676670_26 YCII-related domain - - - 0.000000000000000000000000000000000001706 142.0
BYD3_k127_4676670_27 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000006429 130.0
BYD3_k127_4676670_28 Isochorismatase family - - - 0.00000000000000000000000000007199 124.0
BYD3_k127_4676670_29 DUF218 domain - - - 0.00000000000000000000000000928 119.0
BYD3_k127_4676670_3 PFAM Alcohol dehydrogenase GroES-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 610.0
BYD3_k127_4676670_30 cellulose binding - - - 0.0000000000000000000000007997 116.0
BYD3_k127_4676670_31 YCII-related domain - - - 0.000000000000000000002043 95.0
BYD3_k127_4676670_32 acetyltransferase - - - 0.000000000000000000002704 106.0
BYD3_k127_4676670_33 Antibiotic biosynthesis monooxygenase K11530 - 5.3.1.32 0.000000000000000335 82.0
BYD3_k127_4676670_34 Protein of unknown function (DUF3500) - - - 0.0000000000000008686 80.0
BYD3_k127_4676670_35 protein conserved in bacteria - - - 0.00000000000009751 73.0
BYD3_k127_4676670_36 YCII-related domain - - - 0.0000000000003835 72.0
BYD3_k127_4676670_37 Dehydrogenase K17723 GO:0003674,GO:0003824,GO:0003954,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 0.0000006437 54.0
BYD3_k127_4676670_38 4Fe-4S dicluster domain K17723 GO:0003674,GO:0003824,GO:0003954,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 0.00007475 49.0
BYD3_k127_4676670_4 RNA polymerase sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 467.0
BYD3_k127_4676670_5 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 447.0
BYD3_k127_4676670_6 Binding-protein-dependent transport system inner membrane component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 442.0
BYD3_k127_4676670_7 PFAM YCII-related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 404.0
BYD3_k127_4676670_8 PFAM Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 388.0
BYD3_k127_4676670_9 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 376.0
BYD3_k127_47833_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 610.0
BYD3_k127_47833_1 Belongs to the Glu Leu Phe Val dehydrogenases family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003901 499.0
BYD3_k127_47833_10 Rieske 2Fe-2S - - - 0.00000000000000000000000001247 113.0
BYD3_k127_47833_11 Histidine kinase - - - 0.00000000000000000000009569 107.0
BYD3_k127_47833_12 Rieske [2Fe-2S] domain - - - 0.000000000000000008511 89.0
BYD3_k127_47833_13 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000004039 65.0
BYD3_k127_47833_14 Major Facilitator Superfamily - - - 0.00000000006466 69.0
BYD3_k127_47833_15 Major Facilitator Superfamily - - - 0.0006473 47.0
BYD3_k127_47833_2 Dihydrodipicolinate synthetase family K14585 - 4.1.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 336.0
BYD3_k127_47833_3 Sugar fermentation stimulation protein K06206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000258 270.0
BYD3_k127_47833_4 Isochorismatase family K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000004203 248.0
BYD3_k127_47833_5 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000005995 211.0
BYD3_k127_47833_6 PFAM Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000004009 204.0
BYD3_k127_47833_7 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.0000000000000000000000000000000000000000000000006909 187.0
BYD3_k127_47833_8 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000000000001752 174.0
BYD3_k127_47833_9 Histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000000000000000003865 160.0
BYD3_k127_4830377_0 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 484.0
BYD3_k127_4830377_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K00087 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006929 463.0
BYD3_k127_4830377_10 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000001344 113.0
BYD3_k127_4830377_11 Protein of unknown function (DUF2442) - - - 0.00000000000000002631 85.0
BYD3_k127_4830377_12 Domain of unknown function (DUF4160) - - - 0.000000000000001059 79.0
BYD3_k127_4830377_13 Belongs to the mandelate racemase muconate lactonizing enzyme family - - - 0.00000005025 55.0
BYD3_k127_4830377_2 PFAM oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008269 395.0
BYD3_k127_4830377_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 351.0
BYD3_k127_4830377_4 Rieske (2fe-2S) K15060 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008694 344.0
BYD3_k127_4830377_5 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000002314 228.0
BYD3_k127_4830377_6 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000002096 190.0
BYD3_k127_4830377_7 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000001106 132.0
BYD3_k127_4830377_8 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000001576 126.0
BYD3_k127_4830377_9 ABC-type Fe3 transport system permease component K02011 - - 0.0000000000000000000000006691 110.0
BYD3_k127_4890392_0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 332.0
BYD3_k127_4890392_1 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008913 289.0
BYD3_k127_4890392_3 COG2010 Cytochrome c, mono- and diheme variants - - - 0.000000000000000000000000002165 114.0
BYD3_k127_4890392_4 - - - - 0.00000003822 63.0
BYD3_k127_4910706_0 PFAM amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006731 262.0
BYD3_k127_4910706_1 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000002322 213.0
BYD3_k127_4910706_10 lactoylglutathione lyase activity - - - 0.000000000001838 78.0
BYD3_k127_4910706_11 4Fe-4S single cluster domain K05337 - - 0.00000000006757 65.0
BYD3_k127_4910706_2 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000001433 211.0
BYD3_k127_4910706_3 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000001279 205.0
BYD3_k127_4910706_4 FMN-dependent dehydrogenase K00101,K16422 - 1.1.2.3,1.1.3.46 0.000000000000000000000000000000000000000000000000002094 195.0
BYD3_k127_4910706_5 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000001612 171.0
BYD3_k127_4910706_6 SMART HNH nuclease K07451 - - 0.0000000000000000000000000000000006208 132.0
BYD3_k127_4910706_7 short-chain dehydrogenase K00059,K18337 - 1.1.1.100,1.1.1.173,1.1.1.377,1.1.1.378 0.0000000000000000000000001112 110.0
BYD3_k127_4910706_8 Transcription factor zinc-finger K09981 - - 0.00000000000000002782 89.0
BYD3_k127_4910706_9 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051301,GO:0051704,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.00000000000008405 79.0
BYD3_k127_4918685_0 ATP ADP translocase K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 548.0
BYD3_k127_4918685_1 serine-type endopeptidase activity K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 515.0
BYD3_k127_4918685_10 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000001854 144.0
BYD3_k127_4918685_11 ACT domain K03567 - - 0.000000000000000000000000000000005045 135.0
BYD3_k127_4918685_12 Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione K03396 - 4.4.1.22 0.0000000000000000000000000000002704 126.0
BYD3_k127_4918685_13 YCII-related domain - - - 0.0003912 43.0
BYD3_k127_4918685_2 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 400.0
BYD3_k127_4918685_3 COG0656 Aldo keto reductases, related to diketogulonate reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004974 384.0
BYD3_k127_4918685_4 4-phosphoerythronate dehydrogenase activity K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 382.0
BYD3_k127_4918685_5 Integral membrane sensor signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006776 348.0
BYD3_k127_4918685_6 response regulator, receiver K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 317.0
BYD3_k127_4918685_7 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000003035 267.0
BYD3_k127_4918685_8 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000004587 194.0
BYD3_k127_4918685_9 glycosyl transferase family 39 K00721 - 2.4.1.83 0.000000000000000000000000000000000001614 157.0
BYD3_k127_4933555_0 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005557 389.0
BYD3_k127_4933555_1 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007367 291.0
BYD3_k127_4933555_2 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.0000000000000000000000000001582 128.0
BYD3_k127_4942833_0 gluconolactonase activity K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 608.0
BYD3_k127_4942833_1 Cupin 2, conserved barrel domain protein K11477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005463 266.0
BYD3_k127_4942833_2 Cupin 2, conserved barrel domain protein K11477 - - 0.00000000000000000000000000000000000000000000000193 179.0
BYD3_k127_4967124_0 DNA ligase D, 3'-phosphoesterase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 305.0
BYD3_k127_4967124_1 - - - - 0.00000000000000001446 83.0
BYD3_k127_4967124_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000001254 87.0
BYD3_k127_4967124_3 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000261 74.0
BYD3_k127_4967124_4 photosynthesis - - - 0.0000000000001896 78.0
BYD3_k127_4967124_5 ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - 0.00000000001578 70.0
BYD3_k127_4967124_6 ABC transporter substrate binding protein K01989 - - 0.0000001998 56.0
BYD3_k127_5056273_0 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 0.0 1260.0
BYD3_k127_5056273_1 Cytochrome c - - - 0.0 1096.0
BYD3_k127_5056273_10 PFAM Glucose Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 535.0
BYD3_k127_5056273_11 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 522.0
BYD3_k127_5056273_12 Putative modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 512.0
BYD3_k127_5056273_13 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 446.0
BYD3_k127_5056273_14 GH3 auxin-responsive promoter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 453.0
BYD3_k127_5056273_15 Belongs to the UbiD family K03182,K16874 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003898 439.0
BYD3_k127_5056273_16 Glyceraldehyde-3-phosphate dehydrogenase K00150 - 1.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 429.0
BYD3_k127_5056273_17 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004408 396.0
BYD3_k127_5056273_18 ornithine cyclodeaminase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 351.0
BYD3_k127_5056273_19 Major Facilitator Superfamily K02575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 347.0
BYD3_k127_5056273_2 Animal haem peroxidase - - - 0.0 1092.0
BYD3_k127_5056273_20 MltA specific insert domain K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 317.0
BYD3_k127_5056273_21 regulatory protein IclR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008014 294.0
BYD3_k127_5056273_22 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002477 305.0
BYD3_k127_5056273_23 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01664 GO:0000162,GO:0003674,GO:0003824,GO:0004049,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009308,GO:0009309,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042398,GO:0042401,GO:0042430,GO:0042435,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001188 270.0
BYD3_k127_5056273_24 Belongs to the UbiD family K16874 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001308 274.0
BYD3_k127_5056273_25 cation diffusion facilitator family transporter K16264 GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003185 266.0
BYD3_k127_5056273_26 carboxylic acid catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008018 278.0
BYD3_k127_5056273_27 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000069 260.0
BYD3_k127_5056273_28 thiolester hydrolase activity K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000054 259.0
BYD3_k127_5056273_29 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001332 236.0
BYD3_k127_5056273_3 Fe-S oxidoreductase - - - 3.001e-309 959.0
BYD3_k127_5056273_30 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000375 236.0
BYD3_k127_5056273_31 Belongs to the multicopper oxidase YfiH RL5 family K05810 GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0030312,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0046983,GO:0055114,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000006094 219.0
BYD3_k127_5056273_32 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000001349 215.0
BYD3_k127_5056273_33 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000007137 214.0
BYD3_k127_5056273_34 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000002932 205.0
BYD3_k127_5056273_35 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050,K15554 - - 0.000000000000000000000000000000000000000000000000007891 191.0
BYD3_k127_5056273_36 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000007553 180.0
BYD3_k127_5056273_37 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000002658 166.0
BYD3_k127_5056273_38 - - - - 0.000000000000000000000000000000000001687 142.0
BYD3_k127_5056273_39 - - - - 0.000000000000000000000000000000000003466 142.0
BYD3_k127_5056273_4 Domain of Unknown Function (DUF748) - - - 7.972e-266 860.0
BYD3_k127_5056273_40 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000221 129.0
BYD3_k127_5056273_41 Iron-containing redox enzyme - - - 0.00000000000000000000000000001837 136.0
BYD3_k127_5056273_42 Zincin-like metallopeptidase - - - 0.000000000000000000000000001284 117.0
BYD3_k127_5056273_43 protein histidine kinase activity - - - 0.000000000000000000000000003756 130.0
BYD3_k127_5056273_44 COG0457 FOG TPR repeat - - - 0.00000000000000000000000001586 117.0
BYD3_k127_5056273_45 PFAM AIG2 family protein - - - 0.00000000000000000000000002175 115.0
BYD3_k127_5056273_46 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000009977 108.0
BYD3_k127_5056273_47 TIGRFAM competence protein ComEA helix-hairpin-helix repeat K02237 - - 0.0000000000000000000003346 100.0
BYD3_k127_5056273_48 Archaea-specific editing domain of threonyl-tRNA synthetase - - - 0.0000000000000000009136 91.0
BYD3_k127_5056273_49 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000001078 97.0
BYD3_k127_5056273_5 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 1.121e-258 814.0
BYD3_k127_5056273_50 PFAM UspA domain protein K06149 - - 0.000000000000000004177 89.0
BYD3_k127_5056273_51 Haem-degrading - - - 0.0000000000000183 78.0
BYD3_k127_5056273_52 SMART extracellular solute-binding protein family 3 K02051 - - 0.0000000001476 72.0
BYD3_k127_5056273_53 NMT1-like family K02051 - - 0.000000000181 72.0
BYD3_k127_5056273_54 SMART Transport-associated and nodulation region K04065 - - 0.0000000001911 65.0
BYD3_k127_5056273_55 thiamine-containing compound biosynthetic process K02051 - - 0.000000001144 68.0
BYD3_k127_5056273_56 Asp Glu racemase K01799 - 5.2.1.1 0.000000001572 67.0
BYD3_k127_5056273_57 COG3103 SH3 domain protein K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.000000001824 66.0
BYD3_k127_5056273_58 Endoribonuclease L-PSP - - - 0.00000001646 58.0
BYD3_k127_5056273_59 ABC transporter substrate-binding protein K02051 - - 0.00000858 54.0
BYD3_k127_5056273_6 cytochrome C peroxidase - - - 4.204e-234 732.0
BYD3_k127_5056273_60 conserved protein, contains double-stranded beta-helix domain - - - 0.0004608 48.0
BYD3_k127_5056273_7 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 1.323e-226 725.0
BYD3_k127_5056273_8 Putative modulator of DNA gyrase K03568 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564 - 2.314e-207 654.0
BYD3_k127_5056273_9 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005635 565.0
BYD3_k127_51614_0 RnfC Barrel sandwich hybrid domain K20140 - 6.4.1.7 1.466e-210 663.0
BYD3_k127_51614_1 peptidase S15 K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 567.0
BYD3_k127_51614_2 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 419.0
BYD3_k127_51614_3 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 409.0
BYD3_k127_51614_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000005187 126.0
BYD3_k127_51614_5 Major facilitator superfamily K05819 - - 0.000000000000000002017 98.0
BYD3_k127_5198916_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.774e-224 704.0
BYD3_k127_5198916_1 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121 422.0
BYD3_k127_5198916_10 Uncharacterized conserved protein (DUF2267) - - - 0.0000000000000000000000000000000000000000000662 164.0
BYD3_k127_5198916_11 Uncharacterised protein family UPF0066 - - - 0.000000000000000000000000000000000000000003864 162.0
BYD3_k127_5198916_12 PFAM Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000000000000000000000001015 166.0
BYD3_k127_5198916_13 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000000000004951 145.0
BYD3_k127_5198916_14 Mechanosensitive ion channel K03442 - - 0.000000000000000000000000001419 113.0
BYD3_k127_5198916_15 mechanosensitive ion channel K03442 - - 0.0000000000000000000000000614 112.0
BYD3_k127_5198916_16 methyltransferase activity K00587 - 2.1.1.100 0.0000000000003557 78.0
BYD3_k127_5198916_17 Multicopper oxidase K06324 - 1.16.3.3 0.00000000000159 67.0
BYD3_k127_5198916_18 ribonuclease BN K07058 - - 0.000000004826 59.0
BYD3_k127_5198916_2 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 382.0
BYD3_k127_5198916_3 Hydrogenase expression formation protein (HypE) K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 357.0
BYD3_k127_5198916_4 Abc transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 326.0
BYD3_k127_5198916_5 Malic enzyme, NAD binding domain K00027,K00029 - 1.1.1.38,1.1.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005475 318.0
BYD3_k127_5198916_6 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009396 314.0
BYD3_k127_5198916_7 ZIP Zinc transporter K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 287.0
BYD3_k127_5198916_8 Phenylacetate-CoA oxygenase K15512 - 1.14.13.208 0.00000000000000000000000000000000000000000000000000000000002619 219.0
BYD3_k127_5198916_9 ABC-type transport auxiliary lipoprotein component K18480 - - 0.0000000000000000000000000000000000000000000000001229 184.0
BYD3_k127_5200509_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.038e-310 977.0
BYD3_k127_5200509_1 TRCF K03723 - - 1.093e-298 958.0
BYD3_k127_5200509_10 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 317.0
BYD3_k127_5200509_11 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005384 308.0
BYD3_k127_5200509_12 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000002502 274.0
BYD3_k127_5200509_13 SelR domain K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000001974 240.0
BYD3_k127_5200509_14 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000002011 234.0
BYD3_k127_5200509_15 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000943 233.0
BYD3_k127_5200509_16 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000001054 233.0
BYD3_k127_5200509_17 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000005165 222.0
BYD3_k127_5200509_18 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000004602 226.0
BYD3_k127_5200509_19 TIR domain - - - 0.000000000000000000000000000000000000000000005532 182.0
BYD3_k127_5200509_2 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 2.638e-280 865.0
BYD3_k127_5200509_20 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000003729 157.0
BYD3_k127_5200509_21 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000001348 156.0
BYD3_k127_5200509_22 SurA N-terminal domain K03771 - 5.2.1.8 0.0000000000000000000000000000000000005357 155.0
BYD3_k127_5200509_23 Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate K02437 GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 - 0.000000000000000000000000000000001619 133.0
BYD3_k127_5200509_24 Iron-sulphur cluster biosynthesis - - - 0.000000000000000000000000000004233 123.0
BYD3_k127_5200509_25 transcriptional regulator, Rrf2 family - - - 0.000000000000000000000000001532 119.0
BYD3_k127_5200509_26 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K06034 - 4.1.1.79 0.000000000000000000000000006942 116.0
BYD3_k127_5200509_27 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.0000000000000000000000002051 113.0
BYD3_k127_5200509_28 FAD dependent oxidoreductase - - - 0.000000000000000000000005296 108.0
BYD3_k127_5200509_29 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000004093 109.0
BYD3_k127_5200509_3 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 546.0
BYD3_k127_5200509_30 Domain of unknown function (DUF309) K09763 - - 0.00000000001397 69.0
BYD3_k127_5200509_31 cell cycle K05589,K12065,K13052 - - 0.0000009396 57.0
BYD3_k127_5200509_32 Bacterial Ig-like domain 2 - - - 0.000005097 59.0
BYD3_k127_5200509_4 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 537.0
BYD3_k127_5200509_5 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 517.0
BYD3_k127_5200509_6 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 480.0
BYD3_k127_5200509_7 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008019 425.0
BYD3_k127_5200509_8 Binding-protein-dependent transport system inner membrane component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 415.0
BYD3_k127_5200509_9 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006424 338.0
BYD3_k127_5235061_0 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005561 453.0
BYD3_k127_5235061_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 399.0
BYD3_k127_5235061_10 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000004426 209.0
BYD3_k127_5235061_11 Protein of unknown function (DUF423) - - - 0.0000000000000000000000000000000000000000000003007 169.0
BYD3_k127_5235061_12 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.000000000000000000000000000000000000000000007074 172.0
BYD3_k127_5235061_13 PFAM binding-protein-dependent transport systems inner membrane component - - - 0.0000000000000000000004084 101.0
BYD3_k127_5235061_14 Domain of unknown function (DUF309) K09763 - - 0.000000000000000000986 91.0
BYD3_k127_5235061_15 Protein of unknown function (DUF861) - - - 0.0002967 48.0
BYD3_k127_5235061_2 Conserved carboxylase domain K01571 - 4.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000435 402.0
BYD3_k127_5235061_3 Conserved carboxylase domain K01571 - 4.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 379.0
BYD3_k127_5235061_4 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007478 292.0
BYD3_k127_5235061_5 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 289.0
BYD3_k127_5235061_6 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000121 277.0
BYD3_k127_5235061_7 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000002734 263.0
BYD3_k127_5235061_8 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005564 249.0
BYD3_k127_5235061_9 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000002666 237.0
BYD3_k127_5295989_0 lipopolysaccharide transport K22110 - - 0.0 1384.0
BYD3_k127_5295989_1 choline dehydrogenase activity - - - 2.307e-260 810.0
BYD3_k127_5295989_10 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 314.0
BYD3_k127_5295989_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 309.0
BYD3_k127_5295989_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 297.0
BYD3_k127_5295989_13 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 293.0
BYD3_k127_5295989_14 Periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001968 286.0
BYD3_k127_5295989_15 MOSC domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009223 279.0
BYD3_k127_5295989_16 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000001412 271.0
BYD3_k127_5295989_17 Mycolic acid cyclopropane synthetase K05928 - 2.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000006339 267.0
BYD3_k127_5295989_18 COG0665 Glycine D-amino acid oxidases (deaminating) K19746 - 1.4.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000005912 250.0
BYD3_k127_5295989_19 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000002683 232.0
BYD3_k127_5295989_2 Amylo-alpha-1,6-glucosidase - - - 2.676e-246 777.0
BYD3_k127_5295989_20 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000004838 212.0
BYD3_k127_5295989_21 Transglycosylase SLT domain K06381,K08309 - - 0.000000000000000000000000000000000000000000000000000000000002061 233.0
BYD3_k127_5295989_22 TraB family K09973 - - 0.00000000000000000000000000000000000000000000000000000000001161 219.0
BYD3_k127_5295989_23 4,5-dihydroxyphthalate decarboxylase K04102 - 4.1.1.55 0.00000000000000000000000000000000000000000000000000000001664 209.0
BYD3_k127_5295989_24 Glycine sarcosine betaine reductase K10671 - 1.21.4.2 0.00000000000000000000000000000000000000000000000000008414 202.0
BYD3_k127_5295989_25 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000000001443 194.0
BYD3_k127_5295989_26 GTP binding K09767 GO:0000049,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0009987,GO:0017076,GO:0019001,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033554,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000075 188.0
BYD3_k127_5295989_27 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K16843 - 1.1.1.310 0.000000000000000000000000000000000000000000000000001019 196.0
BYD3_k127_5295989_28 GAF domain - - - 0.000000000000000000000000000000000000000000000000001721 207.0
BYD3_k127_5295989_29 - - - - 0.00000000000000000000000000000000000000000000000006156 189.0
BYD3_k127_5295989_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007315 443.0
BYD3_k127_5295989_30 peptidase - - - 0.0000000000000000000000000000000000000000000000009985 189.0
BYD3_k127_5295989_31 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000000000004151 165.0
BYD3_k127_5295989_32 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000004859 161.0
BYD3_k127_5295989_33 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015,K00058 - 1.1.1.26,1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000001836 166.0
BYD3_k127_5295989_34 - - - - 0.00000000000000000000000000000000000000009379 162.0
BYD3_k127_5295989_35 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000003536 158.0
BYD3_k127_5295989_36 Alkylhydroperoxidase AhpD family core domain-containing protein 7 - - - 0.00000000000000000000000000000000000001324 150.0
BYD3_k127_5295989_37 major facilitator superfamily - - - 0.0000000000000000000000000000000000001146 157.0
BYD3_k127_5295989_38 FIST_C - - - 0.00000000000000000000000000000000000567 151.0
BYD3_k127_5295989_39 major facilitator superfamily - - - 0.000000000000000000000000000000003048 145.0
BYD3_k127_5295989_4 PhoPQ-activated pathogenicity-related protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006993 431.0
BYD3_k127_5295989_40 metal-dependent hydrolase of the TIM-barrel fold K07045 - - 0.000000000000000000000006631 114.0
BYD3_k127_5295989_41 PFAM CBS domain containing protein K04767 - - 0.00000000000000000008105 95.0
BYD3_k127_5295989_42 TLC ATP/ADP transporter K03301 - - 0.0000000000000000007171 100.0
BYD3_k127_5295989_43 ABC-type nitrate sulfonate bicarbonate transport - - - 0.0000000000000000009268 97.0
BYD3_k127_5295989_44 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000003151 94.0
BYD3_k127_5295989_45 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000004385 89.0
BYD3_k127_5295989_46 Selenoprotein B glycine betaine sarcosine D-proline reductase - - - 0.000000000001869 69.0
BYD3_k127_5295989_47 DoxX K16937 - 1.8.5.2 0.00000000003378 70.0
BYD3_k127_5295989_48 Pfam:N_methyl_2 K02650 - - 0.000000000141 66.0
BYD3_k127_5295989_49 Cupin domain - - - 0.000000001142 65.0
BYD3_k127_5295989_5 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004776 373.0
BYD3_k127_5295989_50 Rieske-like [2Fe-2S] domain - - - 0.000000002465 63.0
BYD3_k127_5295989_51 histidine kinase dimerisation and phosphoacceptor region - - - 0.0000007749 61.0
BYD3_k127_5295989_52 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00004799 55.0
BYD3_k127_5295989_53 of the double-stranded beta helix - - - 0.00006177 53.0
BYD3_k127_5295989_6 Conserved carboxylase domain K01571 - 4.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 370.0
BYD3_k127_5295989_7 Selenoprotein B, glycine betaine sarcosine D-proline reductase family K10672 - 1.21.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 351.0
BYD3_k127_5295989_8 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006347 335.0
BYD3_k127_5295989_9 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 329.0
BYD3_k127_5318522_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 592.0
BYD3_k127_5318522_1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 411.0
BYD3_k127_5318522_2 molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 358.0
BYD3_k127_5318522_3 Isochorismatase family K09020 - 3.5.1.110 0.00000000000000000000000000000000000000000000000000000001815 205.0
BYD3_k127_5318522_4 PFAM CBS domain K03699 - - 0.00000000000000000000000000000000000000000000000007167 181.0
BYD3_k127_5318522_5 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000137 133.0
BYD3_k127_5318522_6 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000005446 109.0
BYD3_k127_5344867_0 proline dipeptidase activity - - - 1.098e-234 730.0
BYD3_k127_5344867_1 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K21417 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 534.0
BYD3_k127_5344867_10 Hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001325 278.0
BYD3_k127_5344867_11 PFAM CBS domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001251 269.0
BYD3_k127_5344867_12 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000009886 217.0
BYD3_k127_5344867_13 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000003292 190.0
BYD3_k127_5344867_14 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000001145 163.0
BYD3_k127_5344867_15 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000001375 147.0
BYD3_k127_5344867_16 Smr domain K07456 GO:0000018,GO:0008150,GO:0009892,GO:0010605,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0045910,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0080090 - 0.000000000000000000000000000007834 125.0
BYD3_k127_5344867_17 membrane transporter protein K07090 - - 0.0000000000000000000000016 113.0
BYD3_k127_5344867_18 PFAM Peptidase family M48 - - - 0.000000000000002056 84.0
BYD3_k127_5344867_19 Belongs to the ompA family - - - 0.0005712 47.0
BYD3_k127_5344867_2 PFAM dehydrogenase E1 component K21416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009454 463.0
BYD3_k127_5344867_3 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003028 434.0
BYD3_k127_5344867_4 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008456 383.0
BYD3_k127_5344867_5 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 380.0
BYD3_k127_5344867_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005407 390.0
BYD3_k127_5344867_7 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 361.0
BYD3_k127_5344867_8 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 348.0
BYD3_k127_5344867_9 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 302.0
BYD3_k127_5524411_0 NAD(P)-binding Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005833 619.0
BYD3_k127_5524411_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 432.0
BYD3_k127_5524411_2 L-carnitine dehydratase bile acid-inducible protein F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001642 291.0
BYD3_k127_5524411_3 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000141 212.0
BYD3_k127_5524411_4 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000008223 190.0
BYD3_k127_5524411_5 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000008338 183.0
BYD3_k127_5524411_6 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000001814 181.0
BYD3_k127_5524411_7 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000004679 144.0
BYD3_k127_5524411_8 COG0500 SAM-dependent methyltransferases K07755 - 2.1.1.137 0.000000000000000000000000000000000609 133.0
BYD3_k127_5524411_9 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000002026 125.0
BYD3_k127_5530491_0 Domain of unknown function (DUF4105) - - - 1.506e-210 672.0
BYD3_k127_5530491_1 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 355.0
BYD3_k127_5530491_2 fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000004693 202.0
BYD3_k127_5530491_3 Cupin 2, conserved barrel domain protein K00452,K11312,K16953 - 1.13.11.6,4.4.1.3 0.0000000000000000000000000000000000000000000009325 172.0
BYD3_k127_5530491_4 Protein of unknown function (DUF3015) - - - 0.00000000000000000000000000000000000000000004011 167.0
BYD3_k127_5530491_5 ACT domain - - - 0.0000000000000000000000000000000329 130.0
BYD3_k127_5530491_6 TPM domain K06872 - - 0.00000000000000006754 91.0
BYD3_k127_5530491_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000004053 77.0
BYD3_k127_5541092_0 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 528.0
BYD3_k127_5541092_1 PFAM short chain dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004954 497.0
BYD3_k127_5541092_10 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000000000000000000000000000000000000000000003105 189.0
BYD3_k127_5541092_11 PFAM MgtC SapB transporter K07507 - - 0.0000000000000000000000000000000000000000000000000002787 189.0
BYD3_k127_5541092_12 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000001944 185.0
BYD3_k127_5541092_13 Cupin - - - 0.0000000000000000000000000000000000000000000000004522 179.0
BYD3_k127_5541092_14 Membrane - - - 0.000000000000000000000000000000000000000000000003864 178.0
BYD3_k127_5541092_15 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000002498 162.0
BYD3_k127_5541092_16 Protein of unknown function (DUF2442) - - - 0.0000000000000000000000000000000001247 135.0
BYD3_k127_5541092_17 - - - - 0.0000000000000000000000000000000001483 143.0
BYD3_k127_5541092_18 TIR domain - - - 0.00000000000000000000000000000001368 129.0
BYD3_k127_5541092_19 Stage II sporulation protein M K06384 - - 0.000000000000000000000000000003726 127.0
BYD3_k127_5541092_2 Major facilitator superfamily K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 389.0
BYD3_k127_5541092_20 Probable zinc-ribbon domain - - - 0.000000000000000000000000000004853 121.0
BYD3_k127_5541092_21 pyridoxamine 5'-phosphate K07005 - - 0.00000000000000000000000005878 116.0
BYD3_k127_5541092_22 PFAM Histidine triad (HIT) protein - - - 0.00000000000000000000000006021 111.0
BYD3_k127_5541092_23 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000000000000002182 105.0
BYD3_k127_5541092_24 LexA DNA binding domain - - - 0.00000000000000000000004695 102.0
BYD3_k127_5541092_25 Protein of unknown function (DUF1648) - - - 0.00000000000000000003142 99.0
BYD3_k127_5541092_26 dihydrofolate reductase activity - - - 0.0000000000000000003664 89.0
BYD3_k127_5541092_27 - - - - 0.0000000000001982 75.0
BYD3_k127_5541092_29 Domain of unknown function (DUF4160) - - - 0.0000000001461 64.0
BYD3_k127_5541092_3 DNA-3-methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007447 305.0
BYD3_k127_5541092_30 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000002301 62.0
BYD3_k127_5541092_31 - - - - 0.000000006614 59.0
BYD3_k127_5541092_32 Domain of unknown function (DUF4160) - - - 0.0000001968 55.0
BYD3_k127_5541092_34 Trypsin-like peptidase domain K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051603,GO:0061077,GO:0070011,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.107 0.0001065 53.0
BYD3_k127_5541092_4 Tryptophan-rich sensory protein K05770 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 297.0
BYD3_k127_5541092_5 Predicted integral membrane protein (DUF2269) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000115 276.0
BYD3_k127_5541092_6 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000001359 249.0
BYD3_k127_5541092_7 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781 - 5.1.2.2 0.000000000000000000000000000000000000000000000000000000000000007454 231.0
BYD3_k127_5541092_8 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000003325 223.0
BYD3_k127_5541092_9 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000002019 190.0
BYD3_k127_564050_0 mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth K15738 - - 1.425e-214 682.0
BYD3_k127_564050_1 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 312.0
BYD3_k127_564050_10 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding - - - 0.00000000000005891 75.0
BYD3_k127_564050_11 competence protein ComEA K02237 - - 0.000000004842 61.0
BYD3_k127_564050_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 GO:0003674,GO:0003824,GO:0004795,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008144,GO:0016829,GO:0016835,GO:0016838,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002157 283.0
BYD3_k127_564050_3 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001359 262.0
BYD3_k127_564050_4 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000000000000000000000000000000000000000000000000005814 232.0
BYD3_k127_564050_5 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.000000000000000000000000000000000000000000000000000006029 197.0
BYD3_k127_564050_6 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.00000000000000000000000000000000005507 139.0
BYD3_k127_564050_8 alpha beta - - - 0.000000000000000000000000001429 123.0
BYD3_k127_564050_9 hydrolase activity, acting on ester bonds K01187,K03466,K07017 - 3.2.1.20 0.000000000000001127 91.0
BYD3_k127_5713799_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 582.0
BYD3_k127_5713799_1 Amidohydrolase family K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006313 283.0
BYD3_k127_5713799_2 Belongs to the mandelate racemase muconate lactonizing enzyme family K01856 - 5.5.1.1 0.00000000000000000000000000000000000000002324 165.0
BYD3_k127_5713799_3 PFAM amidohydrolase K07045 - - 0.00000000000000000000000000000000001726 148.0
BYD3_k127_5713799_4 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000092 141.0
BYD3_k127_5713799_5 Lrp/AsnC ligand binding domain - - - 0.00000000000000000000000000000001907 130.0
BYD3_k127_5713799_6 PFAM amidohydrolase K07045 - - 0.0000000000000000000000000001624 127.0
BYD3_k127_5713799_7 Short-chain dehydrogenase reductase sdr - - - 0.00000000000000000516 91.0
BYD3_k127_5713799_8 - - - - 0.000000000000003999 82.0
BYD3_k127_5713799_9 Amidohydrolase - - - 0.0000123 52.0
BYD3_k127_5873317_0 Ion channel - - - 4.686e-200 638.0
BYD3_k127_5873317_1 Methyl-transferase K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006179 503.0
BYD3_k127_5873317_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009036 313.0
BYD3_k127_5873317_3 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway K03707 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.5.99.2 0.00000000000000000000000000000000000000000000000000000002745 203.0
BYD3_k127_5873317_4 Serine aminopeptidase, S33 K05714 - 3.7.1.14 0.0005539 47.0
BYD3_k127_5928289_0 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 493.0
BYD3_k127_5928289_1 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 364.0
BYD3_k127_5928289_2 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007953 280.0
BYD3_k127_5932482_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07306,K08352 - 1.8.5.3,1.8.5.5 7.575e-220 709.0
BYD3_k127_5932482_1 DNA photolyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008323 435.0
BYD3_k127_5932482_10 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00001147 49.0
BYD3_k127_5932482_2 Belongs to the MlaE permease family K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 408.0
BYD3_k127_5932482_3 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 339.0
BYD3_k127_5932482_4 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000003174 268.0
BYD3_k127_5932482_5 Mammalian cell entry related domain protein K02067,K06192 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006637 273.0
BYD3_k127_5932482_6 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000141 205.0
BYD3_k127_5932482_7 ABC-type transport auxiliary lipoprotein component K18480 - - 0.000000000000000000000000004932 119.0
BYD3_k127_5932482_8 FAD binding domain K07077 - - 0.000000000000000000000004554 114.0
BYD3_k127_5932482_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08234 - - 0.000000001316 64.0
BYD3_k127_5944751_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000007415 252.0
BYD3_k127_5944751_1 HWE histidine kinase - - - 0.00000000000000000000000000000009896 143.0
BYD3_k127_5944751_2 Rubrerythrin - - - 0.000006774 55.0
BYD3_k127_5979739_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 6.845e-214 678.0
BYD3_k127_5979739_1 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 584.0
BYD3_k127_5979739_10 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 387.0
BYD3_k127_5979739_11 ATPase associated with K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008286 372.0
BYD3_k127_5979739_12 quinone binding K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 361.0
BYD3_k127_5979739_13 ABC transporter K02049,K15555 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009113 356.0
BYD3_k127_5979739_14 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 353.0
BYD3_k127_5979739_15 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005051 331.0
BYD3_k127_5979739_16 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007793 331.0
BYD3_k127_5979739_17 PFAM phosphoesterase, RecJ domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 325.0
BYD3_k127_5979739_18 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003594 304.0
BYD3_k127_5979739_19 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 302.0
BYD3_k127_5979739_2 NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004186 560.0
BYD3_k127_5979739_20 thiolester hydrolase activity K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 286.0
BYD3_k127_5979739_21 FAH family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001123 288.0
BYD3_k127_5979739_22 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007373 282.0
BYD3_k127_5979739_23 YceG-like family K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007261 280.0
BYD3_k127_5979739_24 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002148 266.0
BYD3_k127_5979739_25 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000003021 236.0
BYD3_k127_5979739_26 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000000009967 221.0
BYD3_k127_5979739_27 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000008316 226.0
BYD3_k127_5979739_28 Cysteine-rich domain - - - 0.0000000000000000000000000000000000000000000000000000000004287 217.0
BYD3_k127_5979739_29 methyltransferase K22269 - 2.1.1.343 0.000000000000000000000000000000000000000000000000000000002155 213.0
BYD3_k127_5979739_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00334,K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 502.0
BYD3_k127_5979739_30 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 0.00000000000000000000000000000000000000000000000000000000952 216.0
BYD3_k127_5979739_31 reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000181 201.0
BYD3_k127_5979739_32 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000003532 196.0
BYD3_k127_5979739_33 PFAM cytochrome c, class I - - - 0.000000000000000000000000000000000000000000000000006649 193.0
BYD3_k127_5979739_34 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit K00334,K03943 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000004476 178.0
BYD3_k127_5979739_35 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000000004367 169.0
BYD3_k127_5979739_36 4'-phosphopantetheinyl transferase superfamily K00997,K06133 - 2.7.8.7 0.00000000000000000000000000000000000000000001011 172.0
BYD3_k127_5979739_37 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000005332 180.0
BYD3_k127_5979739_38 Uridine phosphorylase K00757 - 2.4.2.3 0.00000000000000000000000000000000000001121 153.0
BYD3_k127_5979739_39 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.0000000000000000000000000000000004004 141.0
BYD3_k127_5979739_4 NAD binding K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 479.0
BYD3_k127_5979739_40 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.6.5.3 0.000000000000000000000000000000005975 132.0
BYD3_k127_5979739_41 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000008281 125.0
BYD3_k127_5979739_42 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000009832 128.0
BYD3_k127_5979739_43 Tetratricopeptide repeat - - - 0.000000000000000000000000000001128 130.0
BYD3_k127_5979739_44 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000001973 125.0
BYD3_k127_5979739_45 DNA polymerase III, delta' K02340 - 2.7.7.7 0.00000000000000000000000000009518 131.0
BYD3_k127_5979739_46 SMART phospholipase D Transphosphatidylase - - - 0.000000000000000000000000002769 119.0
BYD3_k127_5979739_47 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000003736 112.0
BYD3_k127_5979739_48 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.00000000000000000000002063 115.0
BYD3_k127_5979739_49 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000001536 102.0
BYD3_k127_5979739_5 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 454.0
BYD3_k127_5979739_50 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.0000000000000000001915 100.0
BYD3_k127_5979739_51 PFAM regulatory protein MarR K15973 - - 0.0000000000000000004125 94.0
BYD3_k127_5979739_53 Phosphodiester glycosidase - - - 0.00000000000000002414 93.0
BYD3_k127_5979739_54 ThiS family - - - 0.0000000000000006415 79.0
BYD3_k127_5979739_55 - - - - 0.000000000000001946 83.0
BYD3_k127_5979739_56 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.000000000000001992 79.0
BYD3_k127_5979739_57 Belongs to the 'phage' integrase family K03733 - - 0.000000000000002843 82.0
BYD3_k127_5979739_58 Transcriptional regulator - - - 0.0000000002417 68.0
BYD3_k127_5979739_59 F420H(2)-dependent quinone reductase - - - 0.00000003955 60.0
BYD3_k127_5979739_6 formate dehydrogenase (NAD+) activity K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 442.0
BYD3_k127_5979739_60 TIGRFAM regulatory protein, FmdB family - - - 0.0000004489 52.0
BYD3_k127_5979739_61 EamA-like transporter family - - - 0.00001352 56.0
BYD3_k127_5979739_62 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway K03707 - 3.5.99.2 0.0006577 50.0
BYD3_k127_5979739_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 438.0
BYD3_k127_5979739_8 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009286 436.0
BYD3_k127_5979739_9 NMT1/THI5 like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 397.0
BYD3_k127_6013349_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1305.0
BYD3_k127_6013349_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.563e-261 831.0
BYD3_k127_6013349_10 lactate metabolic process K00113 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0045333,GO:0046872,GO:0048037,GO:0051536,GO:0051540,GO:0055114,GO:0071944 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 376.0
BYD3_k127_6013349_11 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 363.0
BYD3_k127_6013349_12 Iron-containing redox enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 324.0
BYD3_k127_6013349_13 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 315.0
BYD3_k127_6013349_14 VWA domain containing CoxE-like protein K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007601 325.0
BYD3_k127_6013349_15 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01576,K01652 - 2.2.1.6,4.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 316.0
BYD3_k127_6013349_16 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 311.0
BYD3_k127_6013349_17 integrase domain protein SAM domain protein K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008086 287.0
BYD3_k127_6013349_18 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000042 295.0
BYD3_k127_6013349_19 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009747 270.0
BYD3_k127_6013349_2 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 6.002e-218 707.0
BYD3_k127_6013349_20 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001103 265.0
BYD3_k127_6013349_21 Rieske [2Fe-2S] domain K19982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000271 264.0
BYD3_k127_6013349_22 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000001057 243.0
BYD3_k127_6013349_23 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000003043 237.0
BYD3_k127_6013349_24 Major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000481 244.0
BYD3_k127_6013349_25 Peptidase M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000002813 232.0
BYD3_k127_6013349_26 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000001702 228.0
BYD3_k127_6013349_27 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000003059 226.0
BYD3_k127_6013349_28 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000000000000000000007069 219.0
BYD3_k127_6013349_29 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000001504 211.0
BYD3_k127_6013349_3 DEAD DEAH box helicase K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 614.0
BYD3_k127_6013349_30 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000003169 194.0
BYD3_k127_6013349_31 Iron-containing redox enzyme K06137 - 1.3.3.11 0.00000000000000000000000000000000000000000002055 170.0
BYD3_k127_6013349_32 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00042 - 1.1.1.60 0.0000000000000000000000000000000000000000001083 171.0
BYD3_k127_6013349_33 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000812 162.0
BYD3_k127_6013349_34 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000001047 162.0
BYD3_k127_6013349_35 NUDIX hydrolase - - - 0.0000000000000000000000000000000000000004098 160.0
BYD3_k127_6013349_36 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000002661 135.0
BYD3_k127_6013349_37 - - - - 0.00000000000000000000000000001032 124.0
BYD3_k127_6013349_38 cellulose binding - - - 0.0000000000000000000000000004147 126.0
BYD3_k127_6013349_39 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding - - - 0.0000000000000000001363 94.0
BYD3_k127_6013349_4 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 GO:0000166,GO:0003674,GO:0003824,GO:0004362,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015036,GO:0015037,GO:0015038,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071949,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 561.0
BYD3_k127_6013349_40 NMT1-like family K02051 - - 0.0000000000000000007229 98.0
BYD3_k127_6013349_41 Bacterial regulatory protein, Fis family - - - 0.000000000000000002942 93.0
BYD3_k127_6013349_42 Iron-containing redox enzyme K06137 - 1.3.3.11 0.000000000000001726 87.0
BYD3_k127_6013349_44 Asp/Glu/Hydantoin racemase K01799 - 5.2.1.1 0.000000002646 67.0
BYD3_k127_6013349_45 protein trimerization K15368 - - 0.0002502 51.0
BYD3_k127_6013349_5 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008491 504.0
BYD3_k127_6013349_6 PFAM UBA THIF-type NAD FAD binding protein K21029,K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 496.0
BYD3_k127_6013349_7 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 458.0
BYD3_k127_6013349_8 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 438.0
BYD3_k127_6013349_9 PFAM ATPase associated with various cellular activities, AAA_5 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 384.0
BYD3_k127_6017057_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 4.713e-257 813.0
BYD3_k127_6017057_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K16877 - 1.3.99.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 344.0
BYD3_k127_6017057_10 PFAM Amidohydrolase 2 - - - 0.00000000000002756 85.0
BYD3_k127_6017057_11 - - - - 0.0000000004006 61.0
BYD3_k127_6017057_12 - - - - 0.0000001293 58.0
BYD3_k127_6017057_2 Rieske [2Fe-2S] domain K21323 - 1.14.13.229,1.14.19.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 312.0
BYD3_k127_6017057_3 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 297.0
BYD3_k127_6017057_4 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000002345 221.0
BYD3_k127_6017057_5 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000002567 228.0
BYD3_k127_6017057_6 tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000007439 224.0
BYD3_k127_6017057_7 [2Fe-2S] binding domain - - - 0.00000000000000000000000000000000000000000000000000000002813 205.0
BYD3_k127_6017057_8 PFAM YeeE YedE family (DUF395) K07112 - - 0.0000000000000000000000000000000000000000008026 166.0
BYD3_k127_6017057_9 transporter component K07112 - - 0.000000000000000000000000000000000000000003566 158.0
BYD3_k127_6027221_0 NAD(P)-binding Rossmann-like domain - - - 1.388e-198 634.0
BYD3_k127_6027221_1 PFAM aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 582.0
BYD3_k127_6027221_10 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007439 321.0
BYD3_k127_6027221_11 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009142 309.0
BYD3_k127_6027221_12 Homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000002863 250.0
BYD3_k127_6027221_13 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000001004 207.0
BYD3_k127_6027221_14 MEKHLA domain - - - 0.0000000000000000000000000000000000000000000000004615 180.0
BYD3_k127_6027221_15 maF-like protein K03215,K06287 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030145,GO:0030312,GO:0036218,GO:0036221,GO:0042802,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0047429,GO:0071944 2.1.1.190 0.000000000000000000000000000000000000000000001021 173.0
BYD3_k127_6027221_16 Conserved TM helix - - - 0.000000000000000000000000000000000000000000002136 175.0
BYD3_k127_6027221_17 NMT1-like family - - - 0.000000000000000000000000000000000003377 151.0
BYD3_k127_6027221_18 COGs COG0596 hydrolase or acyltransferase (alpha beta hydrolase superfamily) K01055 - 3.1.1.24 0.0000000000000000000000008065 115.0
BYD3_k127_6027221_19 NMT1-like family K02051 - - 0.00000000000000001637 94.0
BYD3_k127_6027221_2 transport system fused permease components - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008509 577.0
BYD3_k127_6027221_20 Acts as a magnesium transporter K06213 - - 0.0000000000000000385 92.0
BYD3_k127_6027221_21 NMT1-like family - - - 0.0000000000006121 79.0
BYD3_k127_6027221_22 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0000008143 59.0
BYD3_k127_6027221_3 Proposed homoserine kinase K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006585 458.0
BYD3_k127_6027221_4 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 438.0
BYD3_k127_6027221_5 TIGRFAM fructose-1,6-bisphosphatase, class II K02446 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 429.0
BYD3_k127_6027221_6 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 395.0
BYD3_k127_6027221_7 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 394.0
BYD3_k127_6027221_8 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05541 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 392.0
BYD3_k127_6027221_9 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000597 353.0
BYD3_k127_6069720_0 Hydantoinaseoxoprolinase domain protein K01469,K01473 - 3.5.2.14,3.5.2.9 3.652e-247 781.0
BYD3_k127_6069720_1 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 1.259e-213 677.0
BYD3_k127_6069720_10 KDPG and KHG aldolase K01625,K01631 GO:0003674,GO:0003824,GO:0005975,GO:0006082,GO:0008150,GO:0008152,GO:0008674,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0019520,GO:0019583,GO:0019584,GO:0019752,GO:0032787,GO:0034192,GO:0034194,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046395,GO:0071704,GO:0072329,GO:1901575 4.1.2.14,4.1.2.21,4.1.3.42 0.0000000000000000000000000000000000000003517 159.0
BYD3_k127_6069720_11 Domain of unknown function (DUF4154) - - - 0.00000000000000000000000000000000000001803 160.0
BYD3_k127_6069720_12 Zn-dependent hydrolases of the - - - 0.000000000000000000000000000000000002178 147.0
BYD3_k127_6069720_13 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.0000000000000000000000000000000001096 136.0
BYD3_k127_6069720_14 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000001296 132.0
BYD3_k127_6069720_15 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000009596 107.0
BYD3_k127_6069720_16 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C K06137 - 1.3.3.11 0.000000000000000000000006332 111.0
BYD3_k127_6069720_17 Polymer-forming cytoskeletal - - - 0.000000000000000000814 91.0
BYD3_k127_6069720_18 Helix-turn-helix domain - - - 0.00000002358 58.0
BYD3_k127_6069720_19 Redoxin - - - 0.00005305 49.0
BYD3_k127_6069720_2 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 396.0
BYD3_k127_6069720_3 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 384.0
BYD3_k127_6069720_4 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 383.0
BYD3_k127_6069720_5 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000563 380.0
BYD3_k127_6069720_6 ATPase activity K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000004242 236.0
BYD3_k127_6069720_7 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000001287 206.0
BYD3_k127_6069720_8 amidohydrolase K03392,K07045 - 4.1.1.45 0.00000000000000000000000000000000000000000003389 173.0
BYD3_k127_6069720_9 PFAM small multidrug resistance protein K11741 - - 0.000000000000000000000000000000000000000004943 156.0
BYD3_k127_6107912_0 Glycosyl hydrolase family 65, C-terminal domain - - - 0.0 1654.0
BYD3_k127_6107912_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.453e-287 899.0
BYD3_k127_6107912_2 PFAM phospholipase D Transphosphatidylase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003941 579.0
BYD3_k127_6107912_3 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 387.0
BYD3_k127_6107912_4 methylamine metabolic process K15977 - - 0.000000000000000000000000000000000000002939 150.0
BYD3_k127_6107912_5 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000003315 59.0
BYD3_k127_6128982_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 4.104e-226 708.0
BYD3_k127_6128982_1 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008353 584.0
BYD3_k127_6128982_2 S-adenosylmethionine synthetase (AdoMet synthetase) K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 432.0
BYD3_k127_6128982_3 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 357.0
BYD3_k127_6128982_4 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000001296 187.0
BYD3_k127_6128982_5 COG2010 Cytochrome c, mono- and diheme variants - - - 0.000000000000000000000003244 107.0
BYD3_k127_6128982_6 Sodium:sulfate symporter transmembrane region K11106,K14445 - - 0.00000004086 57.0
BYD3_k127_6128982_7 Phosphoribosyl synthetase-associated domain K00948 - 2.7.6.1 0.0000007529 52.0
BYD3_k127_6128982_8 ZIP Zinc transporter K07238 - - 0.0008264 43.0
BYD3_k127_6155020_0 Cytochrome C and Quinol oxidase polypeptide I K15408 - 1.9.3.1 0.0 1352.0
BYD3_k127_6155020_1 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004443 435.0
BYD3_k127_6155020_2 Putative integral membrane protein (DUF2391) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 306.0
BYD3_k127_6155020_3 - - - - 0.000000000000000000000000000000000000000000000001834 176.0
BYD3_k127_6155020_4 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000007721 181.0
BYD3_k127_6155020_5 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000000006285 115.0
BYD3_k127_6172076_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 9.163e-252 799.0
BYD3_k127_6172076_1 AMP-binding enzyme C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 479.0
BYD3_k127_6172076_10 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000003075 84.0
BYD3_k127_6172076_11 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.00000008228 61.0
BYD3_k127_6172076_12 Aldo/keto reductase family - - - 0.00004802 47.0
BYD3_k127_6172076_2 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K16874 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 447.0
BYD3_k127_6172076_3 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002451 283.0
BYD3_k127_6172076_4 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001814 271.0
BYD3_k127_6172076_5 membrane K02050 - - 0.000000000000000000000000000000000000000000000000000000000001611 219.0
BYD3_k127_6172076_6 2Fe-2S -binding domain protein K03518,K07302,K19819 - 1.2.5.3,1.3.99.16,1.5.99.4 0.0000000000000000000000000000000000000000000000000000000003306 209.0
BYD3_k127_6172076_7 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000416 194.0
BYD3_k127_6172076_8 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.0000000000000000000000000000000000000000000004504 179.0
BYD3_k127_6172076_9 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.00000000000002807 78.0
BYD3_k127_6252493_0 Amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 411.0
BYD3_k127_6252493_1 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000002898 243.0
BYD3_k127_6252493_2 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000004333 241.0
BYD3_k127_6252493_3 PFAM amidohydrolase 2 K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000135 209.0
BYD3_k127_6252493_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.0000000000002439 77.0
BYD3_k127_6372505_0 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009917 605.0
BYD3_k127_6372505_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 494.0
BYD3_k127_6372505_10 cytochrome c K00405,K07245 - - 0.000000000168 67.0
BYD3_k127_6372505_2 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 372.0
BYD3_k127_6372505_3 YmdB-like protein K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 294.0
BYD3_k127_6372505_4 ABC-3 protein K09816,K09819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003757 278.0
BYD3_k127_6372505_5 PFAM ABC transporter related K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000000002383 244.0
BYD3_k127_6372505_6 transcriptional regulator K07722 - - 0.000000000000000000000000000000000000001507 151.0
BYD3_k127_6372505_7 PFAM electron transport protein SCO1 SenC K07152 - - 0.000000000000000000000000000001622 128.0
BYD3_k127_6372505_8 PFAM 5-formyltetrahydrofolate cyclo-ligase K01934 - 6.3.3.2 0.00000000000000000000009813 107.0
BYD3_k127_6372505_9 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000001486 68.0
BYD3_k127_6415832_0 AMP-binding enzyme K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 454.0
BYD3_k127_6415832_1 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000168 264.0
BYD3_k127_6415832_2 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000279 242.0
BYD3_k127_6415832_3 leucine import across plasma membrane K01997 - - 0.0000000000000000000000000000000000000000000000000000000000002837 222.0
BYD3_k127_6415832_4 Belongs to the binding-protein-dependent transport system permease family - - - 0.00000000000000000000000000000000000000003149 170.0
BYD3_k127_6415832_5 PFAM Excinuclease ABC, C subunit K07461 - - 0.00000000000000000000000000000000000003154 145.0
BYD3_k127_6415832_6 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000001683 81.0
BYD3_k127_6506773_0 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 494.0
BYD3_k127_6506773_1 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 414.0
BYD3_k127_6506773_10 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005353 267.0
BYD3_k127_6506773_11 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007092 258.0
BYD3_k127_6506773_12 Sir2 family K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005078 248.0
BYD3_k127_6506773_13 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000005563 247.0
BYD3_k127_6506773_14 Bacterial protein of unknown function (DUF924) - - - 0.000000000000000000000000000000000000000000000000000000000000001641 227.0
BYD3_k127_6506773_15 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000002785 220.0
BYD3_k127_6506773_16 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000002349 216.0
BYD3_k127_6506773_17 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000173 196.0
BYD3_k127_6506773_18 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000008679 190.0
BYD3_k127_6506773_19 - - - - 0.00000000000000000000000000000000000000000007945 167.0
BYD3_k127_6506773_2 acetyl-coa acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 339.0
BYD3_k127_6506773_20 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000001096 169.0
BYD3_k127_6506773_21 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.00000000000000000000000000000000000003621 147.0
BYD3_k127_6506773_22 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.000000000000000000000000000000000005815 149.0
BYD3_k127_6506773_23 Protein of unknown function (DUF559) K07316 - 2.1.1.72 0.00000000000000000000000000000000001723 138.0
BYD3_k127_6506773_24 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.00000000000000000000000000000000009544 141.0
BYD3_k127_6506773_25 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000002651 139.0
BYD3_k127_6506773_26 Thioredoxin-like - - - 0.000000000000000000000000000003022 126.0
BYD3_k127_6506773_27 transport system periplasmic component K01989 - - 0.00000000000000000000001347 104.0
BYD3_k127_6506773_28 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000009247 109.0
BYD3_k127_6506773_29 NMT1-like family K02051 - - 0.00000000000000000001424 103.0
BYD3_k127_6506773_3 Glucose dehydrogenase C-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 325.0
BYD3_k127_6506773_30 TIGRFAM ABC transporter, substrate-binding protein, aliphatic sulfonates family K02051,K15553 - - 0.00000000000000008987 93.0
BYD3_k127_6506773_31 Redoxin - - - 0.00000000006455 65.0
BYD3_k127_6506773_32 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.00000002148 65.0
BYD3_k127_6506773_33 Alkyl hydroperoxide reductase thiol specific antioxidant Mal allergens family protein K03564 - 1.11.1.15 0.0000009194 55.0
BYD3_k127_6506773_34 tail specific protease K03797 GO:0003674,GO:0003824,GO:0004175,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009653,GO:0009987,GO:0016787,GO:0019538,GO:0023052,GO:0030154,GO:0030288,GO:0030313,GO:0030435,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043603,GO:0043900,GO:0043902,GO:0043934,GO:0044237,GO:0044238,GO:0044464,GO:0046983,GO:0048518,GO:0048522,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0140096,GO:1900190,GO:1900192,GO:1901564 3.4.21.102 0.0004793 45.0
BYD3_k127_6506773_4 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 340.0
BYD3_k127_6506773_5 Domain of unknown function (DUF427) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 297.0
BYD3_k127_6506773_6 TIM-barrel fold metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 298.0
BYD3_k127_6506773_7 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006073 287.0
BYD3_k127_6506773_8 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006939 277.0
BYD3_k127_6506773_9 Dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000003871 265.0
BYD3_k127_650987_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 364.0
BYD3_k127_650987_1 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000001545 243.0
BYD3_k127_650987_2 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000000008594 141.0
BYD3_k127_6544427_0 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008456 603.0
BYD3_k127_6544427_1 Belongs to the UbiD family K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 580.0
BYD3_k127_6544427_10 Monooxygenase K14733 - 1.14.13.107 0.000000000000000000000000000000000000000000000000000000000000348 219.0
BYD3_k127_6544427_11 [2Fe-2S] binding domain - - - 0.00000000000000000000000000000000000000000000000000000005604 199.0
BYD3_k127_6544427_12 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000003562 183.0
BYD3_k127_6544427_13 PFAM Endonuclease Exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000399 170.0
BYD3_k127_6544427_14 Reductive dehalogenase subunit - - - 0.0000000000000000000000000000000000000002699 161.0
BYD3_k127_6544427_15 Protein of unknown function (DUF664) - - - 0.0000000000000000000000000000000002898 138.0
BYD3_k127_6544427_16 restriction endonuclease K07448 - - 0.000000000000000000000000000000001298 142.0
BYD3_k127_6544427_17 FCD - - - 0.000000000000000000000000000006114 128.0
BYD3_k127_6544427_18 Putative addiction module component - - - 0.00000000000000000000000000001788 119.0
BYD3_k127_6544427_19 Plasmid stabilization system K19093 GO:0008150,GO:0040008,GO:0045926,GO:0048519,GO:0050789,GO:0065007 - 0.0000000000000000000000000001135 120.0
BYD3_k127_6544427_2 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 567.0
BYD3_k127_6544427_20 PA26 p53-induced protein (sestrin) - - - 0.000000000000002147 80.0
BYD3_k127_6544427_21 NMT1-like family K02051 - - 0.000000000000002575 83.0
BYD3_k127_6544427_22 Cupin - - - 0.00000000000001673 81.0
BYD3_k127_6544427_23 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000004083 81.0
BYD3_k127_6544427_24 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000003539 71.0
BYD3_k127_6544427_25 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000001406 63.0
BYD3_k127_6544427_26 hydroperoxide reductase activity - - - 0.00000002656 59.0
BYD3_k127_6544427_27 - - - - 0.00000006536 62.0
BYD3_k127_6544427_28 hydroperoxide reductase activity - - - 0.000008954 52.0
BYD3_k127_6544427_29 thiamine-containing compound biosynthetic process K02051 - - 0.00004968 51.0
BYD3_k127_6544427_3 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 555.0
BYD3_k127_6544427_4 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 396.0
BYD3_k127_6544427_5 PFAM Glutathione S-transferase, N-terminal domain K11209 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 351.0
BYD3_k127_6544427_6 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 334.0
BYD3_k127_6544427_7 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 325.0
BYD3_k127_6544427_8 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008249 251.0
BYD3_k127_6544427_9 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000001135 244.0
BYD3_k127_6578710_0 PFAM multicopper oxidase type K04753 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000617 482.0
BYD3_k127_6578710_1 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 468.0
BYD3_k127_6578710_2 cytochrome - - - 0.0000000000000000000000000000000000000000001873 165.0
BYD3_k127_6578710_3 ligase activity - - - 0.0000000000000000001413 96.0
BYD3_k127_6578710_4 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000588 56.0
BYD3_k127_6595920_0 Cache domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003053 451.0
BYD3_k127_6595920_1 PFAM S23 ribosomal protein - - - 0.00000000000000000000000000000000000000001735 156.0
BYD3_k127_6595920_2 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000003536 151.0
BYD3_k127_6595920_3 ABC transporter substrate binding protein K01989 - - 0.0000000000001547 70.0
BYD3_k127_661343_0 PD-(D/E)XK nuclease superfamily - - - 1.893e-235 774.0
BYD3_k127_661343_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 583.0
BYD3_k127_661343_10 Bacterial protein of unknown function (DUF883) - - - 0.0000000000000000000000002371 109.0
BYD3_k127_661343_11 DNA replication proofreading K02336,K06877,K07501 - 2.7.7.7 0.000000000000000000000001432 111.0
BYD3_k127_661343_12 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00000000004249 72.0
BYD3_k127_661343_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 572.0
BYD3_k127_661343_3 exonuclease activity K16899 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005611 565.0
BYD3_k127_661343_4 PFAM LOR SDH bifunctional - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 470.0
BYD3_k127_661343_5 Psort location Periplasmic, score 9.44 K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 473.0
BYD3_k127_661343_6 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 437.0
BYD3_k127_661343_8 Amidinotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 323.0
BYD3_k127_661343_9 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 315.0
BYD3_k127_6635550_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1138.0
BYD3_k127_6635550_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 624.0
BYD3_k127_6635550_10 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007854 395.0
BYD3_k127_6635550_11 COG3842 ABC-type spermidine putrescine transport systems, ATPase components K02010,K02017,K15497 - 3.6.3.29,3.6.3.30,3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 376.0
BYD3_k127_6635550_12 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007334 368.0
BYD3_k127_6635550_13 AAA domain (dynein-related subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 362.0
BYD3_k127_6635550_14 iron ion binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 337.0
BYD3_k127_6635550_15 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 337.0
BYD3_k127_6635550_16 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 340.0
BYD3_k127_6635550_17 Amidohydrolase K03392,K10220 - 4.1.1.45,4.2.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 334.0
BYD3_k127_6635550_18 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 338.0
BYD3_k127_6635550_19 Rieske (2fe-2S) K15060 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 331.0
BYD3_k127_6635550_2 Belongs to the thiolase family K00626,K02615 - 2.3.1.174,2.3.1.223,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 532.0
BYD3_k127_6635550_20 Peroxisomal (S)-2-hydroxy-acid oxidase. Source PGD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008352 313.0
BYD3_k127_6635550_21 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003102 308.0
BYD3_k127_6635550_22 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 304.0
BYD3_k127_6635550_23 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009756 297.0
BYD3_k127_6635550_24 VWA domain containing CoxE-like protein K07161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 297.0
BYD3_k127_6635550_25 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 288.0
BYD3_k127_6635550_26 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006847 282.0
BYD3_k127_6635550_27 3-carboxyethylcatechol 2,3-dioxygenase activity K05713 - 1.13.11.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004735 277.0
BYD3_k127_6635550_28 Conserved carboxylase domain K01571 - 4.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005282 278.0
BYD3_k127_6635550_29 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000002585 250.0
BYD3_k127_6635550_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 479.0
BYD3_k127_6635550_30 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000005349 243.0
BYD3_k127_6635550_31 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002292 229.0
BYD3_k127_6635550_32 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000008001 232.0
BYD3_k127_6635550_33 Rieske [2Fe-2S] domain K15060 - - 0.000000000000000000000000000000000000000000000000000000000000001292 234.0
BYD3_k127_6635550_34 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000009222 221.0
BYD3_k127_6635550_35 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.0000000000000000000000000000000000000000000000000000000000008541 214.0
BYD3_k127_6635550_36 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000001648 205.0
BYD3_k127_6635550_37 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000007627 200.0
BYD3_k127_6635550_38 Bacterial type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000006942 203.0
BYD3_k127_6635550_39 XanTHIne and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.000000000000000000000000000000000000000000000000421 184.0
BYD3_k127_6635550_4 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 472.0
BYD3_k127_6635550_40 EVE domain - - - 0.00000000000000000000000000000000000000006054 155.0
BYD3_k127_6635550_41 Bacterial regulatory proteins, tetR family K09017 - - 0.0000000000000000000000000000000000000001133 159.0
BYD3_k127_6635550_42 Pyridoxamine 5'-phosphate oxidase K09979 - - 0.000000000000000000000000000000000001319 143.0
BYD3_k127_6635550_43 Dihydrodipicolinate synthetase family K01714,K22397 - 4.1.2.28,4.3.3.7 0.00000000000000000000000000000000006065 145.0
BYD3_k127_6635550_44 - - - - 0.0000000000000000000000000000000002019 140.0
BYD3_k127_6635550_45 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.00000000000000000000000000000004102 133.0
BYD3_k127_6635550_46 molybdopterin cofactor binding K07402 - - 0.000000000000000000000000005856 114.0
BYD3_k127_6635550_47 VIT family - - - 0.00000000000000000000000234 111.0
BYD3_k127_6635550_48 - - - - 0.00000000000000000001508 93.0
BYD3_k127_6635550_49 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000007594 98.0
BYD3_k127_6635550_5 nitrite transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 458.0
BYD3_k127_6635550_50 Domain of unknown function DUF120 K07732 - 2.7.1.161 0.000000000000000006385 90.0
BYD3_k127_6635550_51 PFAM Amidohydrolase 2 - - - 0.00000000000000002622 94.0
BYD3_k127_6635550_52 Methyltransferase required for the conversion of 2- phytyl-1,4-beta-naphthoquinol to phylloquinol - - - 0.0000000000000004598 89.0
BYD3_k127_6635550_53 - - - - 0.00000000000002347 80.0
BYD3_k127_6635550_54 PFAM Xylose isomerase domain protein TIM barrel - - - 0.0000000000006314 78.0
BYD3_k127_6635550_55 phosphonopyruvate decarboxylase K09459 - 4.1.1.82 0.00000000001037 72.0
BYD3_k127_6635550_56 NMT1-like family K02051 - - 0.00000002339 65.0
BYD3_k127_6635550_57 AsmA family K07289 - - 0.00000002563 68.0
BYD3_k127_6635550_58 AMP binding - - - 0.00004539 53.0
BYD3_k127_6635550_59 peptidase U32 K08303 - - 0.0001427 48.0
BYD3_k127_6635550_6 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 451.0
BYD3_k127_6635550_7 Voltage-dependent anion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 425.0
BYD3_k127_6635550_8 PFAM binding-protein-dependent transport systems inner membrane component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004548 396.0
BYD3_k127_6635550_9 Belongs to the HpcH HpaI aldolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 374.0
BYD3_k127_669918_0 Response regulator receiver - - - 4.42e-219 702.0
BYD3_k127_669918_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 426.0
BYD3_k127_669918_11 Tripartite tricarboxylate transporter family receptor - - - 0.0003277 47.0
BYD3_k127_669918_2 PFAM Stage II sporulation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005912 346.0
BYD3_k127_669918_3 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K17763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 326.0
BYD3_k127_669918_4 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01003,K01841 - 4.1.1.3,5.4.2.9 0.0000000000000000000000000000000000000000000000000000001571 206.0
BYD3_k127_669918_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K17752 - 2.7.11.1 0.000000000000000000000000000000000000000000000000001034 186.0
BYD3_k127_669918_6 STAS domain K17762 - - 0.00000000000000000000000000000000000000000000000000937 183.0
BYD3_k127_669918_7 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000002686 183.0
BYD3_k127_669918_8 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000573 163.0
BYD3_k127_669918_9 DoxX K15977 - - 0.0000000000000000000003027 103.0
BYD3_k127_6739757_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537,K01539 - 3.6.3.8,3.6.3.9 0.0 1365.0
BYD3_k127_6739757_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002236 282.0
BYD3_k127_6739757_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. K02584,K12146,K15836 GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001150,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0042802,GO:0043170,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 0.000000000000000000000000000000000000004815 169.0
BYD3_k127_675562_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071 325.0
BYD3_k127_675562_1 amino acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 322.0
BYD3_k127_675562_2 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000006707 192.0
BYD3_k127_675562_3 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000000000000000009683 147.0
BYD3_k127_675562_4 LysR substrate binding domain - - - 0.0000000000000000000000002067 110.0
BYD3_k127_675562_5 Universal stress protein family - - - 0.000000000000000006819 90.0
BYD3_k127_675562_7 Transcriptional regulator - - - 0.000000000000008676 75.0
BYD3_k127_675562_8 LysR substrate binding domain - - - 0.000000000222 62.0
BYD3_k127_679124_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1222.0
BYD3_k127_679124_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 3.239e-199 645.0
BYD3_k127_679124_2 Biotin-lipoyl like K07799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 366.0
BYD3_k127_679124_3 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 296.0
BYD3_k127_679124_4 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000003794 246.0
BYD3_k127_679124_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000001123 143.0
BYD3_k127_679124_6 positive regulation of proteasomal protein catabolic process - - - 0.000008682 53.0
BYD3_k127_6820390_0 Pyridoxal-dependent decarboxylase conserved domain - - - 4.027e-207 657.0
BYD3_k127_6820390_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 306.0
BYD3_k127_6820390_2 COG2513 PEP phosphonomutase and related enzymes - - - 0.000000000000000000000000000000000000000000000003275 183.0
BYD3_k127_6820390_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000002531 157.0
BYD3_k127_6820390_4 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000001502 58.0
BYD3_k127_6853516_0 Belongs to the catalase family K03781 - 1.11.1.6 0.0 1209.0
BYD3_k127_6853516_1 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 1.801e-235 749.0
BYD3_k127_6853516_10 DNA ligase D, 3'-phosphoesterase domain - - - 0.00000000000000000003619 95.0
BYD3_k127_6853516_11 response regulator K02490 - - 0.00000000000000001047 88.0
BYD3_k127_6853516_12 amino acid activation for nonribosomal peptide biosynthetic process K06045 - 4.2.1.129,5.4.99.17 0.000000000001553 77.0
BYD3_k127_6853516_13 Anti-sigma regulatory factor Ser Thr protein kinase - - - 0.000000000008742 67.0
BYD3_k127_6853516_14 Virulence factor BrkB K07058 - - 0.00000000009315 66.0
BYD3_k127_6853516_15 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000008056 55.0
BYD3_k127_6853516_17 Sigma factor PP2C-like phosphatases - - - 0.00002116 50.0
BYD3_k127_6853516_18 - - - - 0.0001225 49.0
BYD3_k127_6853516_19 ABC transporter substrate binding protein K01989 - - 0.0002432 50.0
BYD3_k127_6853516_2 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000013 269.0
BYD3_k127_6853516_20 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0006341 44.0
BYD3_k127_6853516_3 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.000000000000000000000000000000000000000000000000000000000000000002841 230.0
BYD3_k127_6853516_4 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.000000000000000000000000000000000000000000000000000000000000001773 222.0
BYD3_k127_6853516_5 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000001634 172.0
BYD3_k127_6853516_6 DNA ligase D, 3'-phosphoesterase domain - - - 0.00000000000000000000000000000289 124.0
BYD3_k127_6853516_7 BON domain - - - 0.0000000000000000000000000002499 118.0
BYD3_k127_6853516_8 PFAM transport-associated - - - 0.000000000000000000000001261 108.0
BYD3_k127_6853516_9 Stage II sporulation protein E - - - 0.000000000000000000002649 99.0
BYD3_k127_6897568_0 Tripartite tricarboxylate transporter TctA family - - - 9.473e-200 633.0
BYD3_k127_6897568_1 aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 438.0
BYD3_k127_6897568_10 PFAM Cupin - - - 0.0000004418 59.0
BYD3_k127_6897568_2 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 349.0
BYD3_k127_6897568_3 Amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 351.0
BYD3_k127_6897568_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007481 338.0
BYD3_k127_6897568_5 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.000000000000000000000000000000000000000000002511 180.0
BYD3_k127_6897568_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000615 157.0
BYD3_k127_6897568_7 Conserved carboxylase domain K01571 - 4.1.1.3 0.000000000000000000000000000000000002315 144.0
BYD3_k127_6897568_8 nuclear chromosome segregation - - - 0.00000000000000000000002872 103.0
BYD3_k127_6898216_0 PFAM ABC transporter related K06147 - - 1.002e-214 682.0
BYD3_k127_6898216_1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 471.0
BYD3_k127_6898216_10 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000006955 214.0
BYD3_k127_6898216_11 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000003691 213.0
BYD3_k127_6898216_12 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000705 196.0
BYD3_k127_6898216_13 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress - - - 0.000000000000000000000000000000000000000000000000002542 190.0
BYD3_k127_6898216_14 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000001957 189.0
BYD3_k127_6898216_15 PFAM Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000001594 186.0
BYD3_k127_6898216_16 PAS PAC domain-containing protein - - - 0.0000000000000000000000000000000000000000005866 175.0
BYD3_k127_6898216_17 protein conserved in bacteria - - - 0.000000000000000000000000000000000000331 154.0
BYD3_k127_6898216_18 Evidence 4 Homologs of previously reported genes of K09700 - - 0.000000000000000000000000000000005882 132.0
BYD3_k127_6898216_19 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000003386 117.0
BYD3_k127_6898216_2 xanthine dehydrogenase activity K00087,K12528 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004772 447.0
BYD3_k127_6898216_20 response regulator - - - 0.00000000000000000000002042 104.0
BYD3_k127_6898216_21 Protein of unknown function (DUF3309) - - - 0.00000000000000000002712 92.0
BYD3_k127_6898216_22 - - - - 0.00000000000000000009861 91.0
BYD3_k127_6898216_23 Protein of unknown function (DUF1328) - - - 0.0000000000000006816 78.0
BYD3_k127_6898216_24 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000002765 75.0
BYD3_k127_6898216_26 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.0000000000001222 79.0
BYD3_k127_6898216_27 Protein of unknown function (DUF3096) - - - 0.0000000008426 60.0
BYD3_k127_6898216_28 - - - - 0.000000005254 61.0
BYD3_k127_6898216_29 NMT1-like family K15576,K22067 - - 0.00000004283 64.0
BYD3_k127_6898216_3 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 398.0
BYD3_k127_6898216_30 Putative peptidoglycan binding domain - - - 0.00001006 55.0
BYD3_k127_6898216_4 COG3653 N-acyl-D-aspartate D-glutamate deacylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 392.0
BYD3_k127_6898216_5 ATPase associated with various cellular activities AAA_5 K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 367.0
BYD3_k127_6898216_6 TIGRFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 362.0
BYD3_k127_6898216_7 Encapsulating protein for peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 311.0
BYD3_k127_6898216_8 von Willebrand factor (vWF) type A domain K02448 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005194 300.0
BYD3_k127_6898216_9 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000011 244.0
BYD3_k127_6906047_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 583.0
BYD3_k127_6906047_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 321.0
BYD3_k127_6906047_10 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000483 144.0
BYD3_k127_6906047_11 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) - - - 0.0000000000000000000000000000367 124.0
BYD3_k127_6906047_12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.00000000000000000000000006564 113.0
BYD3_k127_6906047_13 ankyrin 3, node of Ranvier (ankyrin G) - - - 0.00000000000000000003156 101.0
BYD3_k127_6906047_15 NMT1-like family - - - 0.00000000000004998 84.0
BYD3_k127_6906047_2 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 310.0
BYD3_k127_6906047_3 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 294.0
BYD3_k127_6906047_4 alkylbase DNA N-glycosylase activity K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000001398 229.0
BYD3_k127_6906047_5 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000002242 230.0
BYD3_k127_6906047_6 Isochorismatase hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000808 208.0
BYD3_k127_6906047_7 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000009263 196.0
BYD3_k127_6906047_8 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000002122 183.0
BYD3_k127_6906047_9 PFAM luciferase-like - - - 0.00000000000000000000000000000000000000000000002603 184.0
BYD3_k127_6911583_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 1.107e-315 977.0
BYD3_k127_6911583_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 6.383e-286 900.0
BYD3_k127_6911583_10 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.00000000000000000000000000000000000000000000000007372 182.0
BYD3_k127_6911583_11 Lysin motif K06194 - - 0.00000000000000000000000000000000000000000000003122 180.0
BYD3_k127_6911583_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000005491 170.0
BYD3_k127_6911583_13 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000002641 127.0
BYD3_k127_6911583_14 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000001955 107.0
BYD3_k127_6911583_15 Removes 5-oxoproline from various penultimate amino acid residues except L-proline K01304 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:1901564 3.4.19.3 0.000000000005806 74.0
BYD3_k127_6911583_2 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 3.43e-271 851.0
BYD3_k127_6911583_3 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 559.0
BYD3_k127_6911583_4 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009254 543.0
BYD3_k127_6911583_5 PFAM peptidase M16 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 417.0
BYD3_k127_6911583_6 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006474 362.0
BYD3_k127_6911583_7 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 291.0
BYD3_k127_6911583_8 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000001171 245.0
BYD3_k127_6911583_9 Phosphoribosyl transferase domain K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000003173 220.0
BYD3_k127_693896_0 PFAM 4-hydroxyphenylacetate 3-hydroxylase K00483 - 1.14.14.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 489.0
BYD3_k127_693896_1 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 488.0
BYD3_k127_693896_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000003076 139.0
BYD3_k127_693896_11 NMT1-like family K02051 - - 0.000000000000000000000000000009374 131.0
BYD3_k127_693896_13 Ndr family - - - 0.0000000000000000004047 97.0
BYD3_k127_693896_14 Cytidylyltransferase K07141 - 2.7.7.76 0.00000000000000004282 89.0
BYD3_k127_693896_15 - - - - 0.000000000000000888 81.0
BYD3_k127_693896_17 Putative zinc-finger - - - 0.00008862 53.0
BYD3_k127_693896_18 TadE-like protein - - - 0.0008753 49.0
BYD3_k127_693896_2 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 395.0
BYD3_k127_693896_3 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 348.0
BYD3_k127_693896_4 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00226,K00254 - 1.3.5.2,1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 347.0
BYD3_k127_693896_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009088 332.0
BYD3_k127_693896_6 Belongs to the peptidase S8 family K01342,K13275 - 3.4.21.62 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 317.0
BYD3_k127_693896_7 Aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000005752 229.0
BYD3_k127_693896_8 NIPSNAP - - - 0.0000000000000000000000000000000000000000000000000004515 192.0
BYD3_k127_693896_9 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000007295 145.0
BYD3_k127_6945301_0 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0 1044.0
BYD3_k127_6945301_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 551.0
BYD3_k127_6945301_10 type IV pilus secretin PilQ K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008548 273.0
BYD3_k127_6945301_11 PFAM glycosyl transferase family 39 - - - 0.000000000000000000000000000000000000000000000000000000000000006547 241.0
BYD3_k127_6945301_12 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000004409 196.0
BYD3_k127_6945301_13 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000007832 181.0
BYD3_k127_6945301_14 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000008396 170.0
BYD3_k127_6945301_15 Photosynthesis system II assembly factor YCF48 - - - 0.0000000000000000000000000000000000000516 155.0
BYD3_k127_6945301_16 Pilus assembly protein, PilO K02664 - - 0.000000000000000000000000000000001159 138.0
BYD3_k127_6945301_17 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000001172 136.0
BYD3_k127_6945301_18 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000001577 132.0
BYD3_k127_6945301_19 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000002831 116.0
BYD3_k127_6945301_2 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 543.0
BYD3_k127_6945301_20 repeat protein - - - 0.000000000000000000000007487 116.0
BYD3_k127_6945301_21 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.0000000000000000000001616 113.0
BYD3_k127_6945301_22 NMT1-like family K02051 - - 0.00000000000000000001001 104.0
BYD3_k127_6945301_23 Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000001033 96.0
BYD3_k127_6945301_24 PFAM helix-turn-helix domain protein - - - 0.0000000000000000004803 91.0
BYD3_k127_6945301_25 repeat protein - - - 0.0000000000000008215 89.0
BYD3_k127_6945301_26 Pilus assembly protein, PilP K02665 - - 0.00000000008636 72.0
BYD3_k127_6945301_27 PFAM Fimbrial assembly family protein K02663 - - 0.0000000001367 70.0
BYD3_k127_6945301_28 von Willebrand factor, type A - - - 0.0000005259 62.0
BYD3_k127_6945301_29 PFAM Gram-negative bacterial tonB protein K03832 - - 0.0001836 53.0
BYD3_k127_6945301_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 491.0
BYD3_k127_6945301_4 LVIVD repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006427 387.0
BYD3_k127_6945301_5 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 360.0
BYD3_k127_6945301_6 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 313.0
BYD3_k127_6945301_7 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000001125 268.0
BYD3_k127_6945301_8 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001261 273.0
BYD3_k127_6945301_9 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002793 264.0
BYD3_k127_6960618_0 2-methylcitrate dehydratase K01720 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0046459,GO:0047547,GO:0071704 4.2.1.79 8.817e-219 688.0
BYD3_k127_6960618_1 Citrate synthase, C-terminal domain K01659 - 2.3.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005736 523.0
BYD3_k127_6960618_2 Zinc-binding dehydrogenase K19745 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 406.0
BYD3_k127_6960618_3 Conserved carboxylase domain K01571 - 4.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 371.0
BYD3_k127_6960618_4 PFAM Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009293 355.0
BYD3_k127_6960618_5 Phosphoenolpyruvate phosphomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 292.0
BYD3_k127_6960618_6 Protein of unknown function (DUF2459) - - - 0.0000000000000000000000000000000003076 139.0
BYD3_k127_6960618_8 Cupin 2, conserved barrel domain protein - - - 0.000000000004059 76.0
BYD3_k127_7050801_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008439 459.0
BYD3_k127_7050801_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 319.0
BYD3_k127_7050801_2 TIM-barrel fold metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009822 249.0
BYD3_k127_7050801_3 Universal stress protein - - - 0.0000000000000000000819 94.0
BYD3_k127_7080231_0 Phosphoglucose isomerase K00616,K13810 - 2.2.1.2,5.3.1.9 2.316e-307 968.0
BYD3_k127_7080231_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 5.021e-250 789.0
BYD3_k127_7080231_10 Phosphate transporter family K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 337.0
BYD3_k127_7080231_11 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006564 286.0
BYD3_k127_7080231_12 PFAM glucosamine galactosamine-6-phosphate isomerase K01057 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000001102 235.0
BYD3_k127_7080231_13 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000001007 226.0
BYD3_k127_7080231_14 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000001385 201.0
BYD3_k127_7080231_15 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.00000000000000000000000000000000000000000000006062 177.0
BYD3_k127_7080231_16 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000002269 181.0
BYD3_k127_7080231_17 geranylgeranyl reductase activity K21401 - 1.3.99.38 0.000000000000000000000000000000000000000001115 172.0
BYD3_k127_7080231_18 xanthine phosphoribosyltransferase activity - - - 0.00000000000000000000000000000000000000009414 159.0
BYD3_k127_7080231_19 Methyltransferase domain - - - 0.00000000000000000000000000000000001811 144.0
BYD3_k127_7080231_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009512 612.0
BYD3_k127_7080231_20 peroxiredoxin activity K03386,K03564,K16922 - 1.11.1.15 0.0000000000000000000003567 99.0
BYD3_k127_7080231_21 peroxiredoxin activity K03386,K03564,K16922 - 1.11.1.15 0.000000000000007002 79.0
BYD3_k127_7080231_3 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008465 590.0
BYD3_k127_7080231_4 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007725 486.0
BYD3_k127_7080231_5 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 479.0
BYD3_k127_7080231_6 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 407.0
BYD3_k127_7080231_7 Methylase involved in ubiquinone menaquinone biosynthesis K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 405.0
BYD3_k127_7080231_8 TIGRFAM radical SAM Cys-rich domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 376.0
BYD3_k127_7080231_9 Glucokinase K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009353 347.0
BYD3_k127_7082043_0 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 366.0
BYD3_k127_7082043_1 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007225 361.0
BYD3_k127_7082043_10 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0009923 43.0
BYD3_k127_7082043_2 Cupin domain K00450 - 1.13.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005778 335.0
BYD3_k127_7082043_3 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 306.0
BYD3_k127_7082043_4 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002138 238.0
BYD3_k127_7082043_5 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000005931 223.0
BYD3_k127_7082043_6 Asp/Glu/Hydantoin racemase K01799 - 5.2.1.1 0.00000000000000000000000000000000000000003753 159.0
BYD3_k127_7082043_7 - - - - 0.0000000000000000000000000000002032 125.0
BYD3_k127_7082043_8 Putative cyclase - - - 0.00000000000000001766 90.0
BYD3_k127_7082043_9 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K00156,K01576,K01652 - 1.2.5.1,2.2.1.6,4.1.1.7 0.0000000003022 63.0
BYD3_k127_709953_0 RNA polymerase I subunit A N-terminus K03046 - 2.7.7.6 0.0 2090.0
BYD3_k127_709953_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1810.0
BYD3_k127_709953_10 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000003124 257.0
BYD3_k127_709953_11 Belongs to the universal ribosomal protein uS5 family K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000001051 228.0
BYD3_k127_709953_12 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000154 230.0
BYD3_k127_709953_13 With S4 and S5 plays an important role in translational accuracy K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000002171 225.0
BYD3_k127_709953_14 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000001162 216.0
BYD3_k127_709953_15 Forms part of the polypeptide exit tunnel K02926 - - 0.0000000000000000000000000000000000000000000000000000000000002131 217.0
BYD3_k127_709953_16 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000025 211.0
BYD3_k127_709953_17 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000009142 200.0
BYD3_k127_709953_18 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000001344 199.0
BYD3_k127_709953_19 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000007637 195.0
BYD3_k127_709953_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1087.0
BYD3_k127_709953_20 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000003669 181.0
BYD3_k127_709953_21 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000002884 174.0
BYD3_k127_709953_22 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000004643 174.0
BYD3_k127_709953_23 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000003707 156.0
BYD3_k127_709953_24 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000007633 147.0
BYD3_k127_709953_25 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000309 143.0
BYD3_k127_709953_26 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000007547 143.0
BYD3_k127_709953_27 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000008283 135.0
BYD3_k127_709953_28 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000002928 132.0
BYD3_k127_709953_29 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000007155 134.0
BYD3_k127_709953_3 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.231e-194 615.0
BYD3_k127_709953_30 Major Facilitator Superfamily - - - 0.00000000000000000000000000000006527 139.0
BYD3_k127_709953_31 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000003725 113.0
BYD3_k127_709953_32 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000006644 112.0
BYD3_k127_709953_33 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000605 90.0
BYD3_k127_709953_34 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000001516 67.0
BYD3_k127_709953_35 Ribosomal L29 protein K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000004651 57.0
BYD3_k127_709953_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 427.0
BYD3_k127_709953_5 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 350.0
BYD3_k127_709953_6 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 322.0
BYD3_k127_709953_7 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009902 325.0
BYD3_k127_709953_8 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 301.0
BYD3_k127_709953_9 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002787 273.0
BYD3_k127_7184225_0 PBP superfamily domain K03750,K07219 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 310.0
BYD3_k127_7184225_1 NMT1-like family - - - 0.000000000000000000000000000000000000000001688 168.0
BYD3_k127_7184225_2 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000002618 93.0
BYD3_k127_7209453_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 589.0
BYD3_k127_7209453_1 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000002933 223.0
BYD3_k127_7209453_2 Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family K10352,K17751 GO:0000003,GO:0001667,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003008,GO:0003012,GO:0003674,GO:0003774,GO:0003824,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005700,GO:0005703,GO:0005737,GO:0005856,GO:0005859,GO:0005863,GO:0006928,GO:0006936,GO:0006996,GO:0007010,GO:0007015,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007517,GO:0007525,GO:0007527,GO:0007610,GO:0007626,GO:0008150,GO:0008307,GO:0009653,GO:0009888,GO:0009987,GO:0010631,GO:0010927,GO:0014866,GO:0015629,GO:0016043,GO:0016459,GO:0016460,GO:0016462,GO:0016477,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0030016,GO:0030017,GO:0030029,GO:0030036,GO:0030154,GO:0030239,GO:0030241,GO:0030707,GO:0030855,GO:0030898,GO:0031032,GO:0031033,GO:0031034,GO:0031647,GO:0031672,GO:0032501,GO:0032502,GO:0032504,GO:0032956,GO:0032970,GO:0032982,GO:0032989,GO:0032991,GO:0033043,GO:0034622,GO:0036379,GO:0040011,GO:0042623,GO:0042692,GO:0042802,GO:0042803,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043292,GO:0043519,GO:0043520,GO:0043900,GO:0043902,GO:0043933,GO:0044085,GO:0044087,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0044703,GO:0045214,GO:0046983,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048609,GO:0048646,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050794,GO:0050821,GO:0051128,GO:0051146,GO:0051179,GO:0051239,GO:0051240,GO:0051493,GO:0051674,GO:0051704,GO:0055001,GO:0055002,GO:0060278,GO:0060279,GO:0060361,GO:0060429,GO:0061061,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071688,GO:0071689,GO:0071840,GO:0090130,GO:0090132,GO:0097435,GO:0098687,GO:0099080,GO:0099081,GO:0099512,GO:2000241,GO:2000243 - 0.000001073 62.0
BYD3_k127_7209453_3 [2Fe-2S] binding domain K18029 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016491,GO:0016725,GO:0019439,GO:0044237,GO:0044248,GO:0055114 1.17.2.1 0.0008316 44.0
BYD3_k127_723319_0 alcohol dehydrogenase K00001,K00008 - 1.1.1.1,1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005957 291.0
BYD3_k127_723319_1 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003353 283.0
BYD3_k127_723319_2 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000201 202.0
BYD3_k127_7251648_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 2.755e-275 856.0
BYD3_k127_7251648_1 Domain of unknown function (DUF4910) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007338 587.0
BYD3_k127_7251648_10 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 411.0
BYD3_k127_7251648_11 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000405 429.0
BYD3_k127_7251648_12 COG1682 ABC-type polysaccharide polyol phosphate export systems, permease component K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 378.0
BYD3_k127_7251648_13 Putative zinc binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008549 348.0
BYD3_k127_7251648_14 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 342.0
BYD3_k127_7251648_15 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 299.0
BYD3_k127_7251648_16 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001011 286.0
BYD3_k127_7251648_17 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001944 272.0
BYD3_k127_7251648_18 methyltransferase K15471 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0009273,GO:0009987,GO:0016020,GO:0016043,GO:0016740,GO:0016741,GO:0022607,GO:0032259,GO:0042546,GO:0044085,GO:0044464,GO:0071554,GO:0071766,GO:0071770,GO:0071840,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002026 266.0
BYD3_k127_7251648_19 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005943 248.0
BYD3_k127_7251648_2 Polysaccharide biosynthesis protein K01710,K15894,K15912,K19421 GO:0008150,GO:0043900,GO:0043902,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0065007,GO:1900190,GO:1900192 4.2.1.115,4.2.1.135,4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 550.0
BYD3_k127_7251648_20 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000925 260.0
BYD3_k127_7251648_21 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000823 263.0
BYD3_k127_7251648_22 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000001024 238.0
BYD3_k127_7251648_23 SIS domain K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000001398 229.0
BYD3_k127_7251648_24 undecaprenyl-phosphate glucose phosphotransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000003217 223.0
BYD3_k127_7251648_25 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000004081 211.0
BYD3_k127_7251648_26 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000006802 210.0
BYD3_k127_7251648_27 polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000000000000000000000000000000000000000000002264 209.0
BYD3_k127_7251648_28 - - - - 0.000000000000000000000000000000000000000000000000000008451 207.0
BYD3_k127_7251648_29 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000079 191.0
BYD3_k127_7251648_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 537.0
BYD3_k127_7251648_30 - - - - 0.000000000000000000000000000000000000000000001222 175.0
BYD3_k127_7251648_31 Nodulation protein S (NodS) - - - 0.000000000000000000000000000000000000000000002517 174.0
BYD3_k127_7251648_32 histidine kinase A domain protein domain protein - - - 0.0000000000000000000000000000000000000000003393 185.0
BYD3_k127_7251648_33 - K07275 - - 0.00000000000000000000000000000000000009671 151.0
BYD3_k127_7251648_34 hyperosmotic response - - - 0.00000000000000000000000000000001094 135.0
BYD3_k127_7251648_35 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000006099 114.0
BYD3_k127_7251648_36 PFAM Peptidase family M48 - - - 0.00000000000000006725 89.0
BYD3_k127_7251648_37 Putative peptidoglycan binding domain - - - 0.0000000002122 72.0
BYD3_k127_7251648_38 YtxH-like protein - - - 0.0000006536 54.0
BYD3_k127_7251648_4 PFAM ABC transporter related K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 520.0
BYD3_k127_7251648_5 HAD-hyrolase-like K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 511.0
BYD3_k127_7251648_6 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006133 512.0
BYD3_k127_7251648_7 GHMP kinases C terminal K07031 - 2.7.1.168 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 445.0
BYD3_k127_7251648_8 GDP-mannose 4,6 dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 445.0
BYD3_k127_7251648_9 Glyceraldehyde-3-phosphate dehydrogenase K00150 - 1.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 410.0
BYD3_k127_7328085_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 552.0
BYD3_k127_7328085_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 525.0
BYD3_k127_7328085_10 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009495 260.0
BYD3_k127_7328085_11 PFAM LemA family protein K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000002068 237.0
BYD3_k127_7328085_12 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.000000000000000000000000000000000000000000000000000000002789 208.0
BYD3_k127_7328085_13 TPM domain K06872 - - 0.000000000000000000000000000000000000000000000001829 184.0
BYD3_k127_7328085_14 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000000000000000000000004071 170.0
BYD3_k127_7328085_15 Pfam:TPM K08988 - - 0.000000000000000000000000000000000000000002135 163.0
BYD3_k127_7328085_16 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000000002211 155.0
BYD3_k127_7328085_17 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000006349 140.0
BYD3_k127_7328085_18 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000565 137.0
BYD3_k127_7328085_19 membrane - - - 0.00000000000000000000000000000004743 126.0
BYD3_k127_7328085_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 422.0
BYD3_k127_7328085_20 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000000000000006673 124.0
BYD3_k127_7328085_21 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000009741 128.0
BYD3_k127_7328085_22 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000000000001325 112.0
BYD3_k127_7328085_3 Succinyl-CoA ligase like flavodoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007774 396.0
BYD3_k127_7328085_4 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 357.0
BYD3_k127_7328085_5 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 366.0
BYD3_k127_7328085_6 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 349.0
BYD3_k127_7328085_7 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008528 334.0
BYD3_k127_7328085_8 COG0604 NADPH quinone reductase and related Zn-dependent K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007638 316.0
BYD3_k127_7328085_9 Extradiol ring-cleavage dioxygenase K04101,K05713 - 1.13.11.16,1.13.11.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000006096 271.0
BYD3_k127_7417666_0 ethanolamine utilization protein K04019 GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0030091,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009,GO:0071704,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007234 494.0
BYD3_k127_7417666_1 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 432.0
BYD3_k127_7417666_10 Major facilitator superfamily K05820 - - 0.00000000000000000000000000000000004459 149.0
BYD3_k127_7417666_11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000497 56.0
BYD3_k127_7417666_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008959 297.0
BYD3_k127_7417666_4 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000000002833 188.0
BYD3_k127_7417666_5 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.000000000000000000000000000000000000000000000000004324 191.0
BYD3_k127_7417666_6 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs K00087,K03519 - 1.17.1.4,1.2.5.3 0.000000000000000000000000000000000000000000000000004381 192.0
BYD3_k127_7417666_7 AMP-binding enzyme C-terminal domain K00666,K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000003533 183.0
BYD3_k127_7417666_8 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000005676 179.0
BYD3_k127_7417666_9 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000001314 180.0
BYD3_k127_7433707_0 Hexapeptide repeat of succinyl-transferase K13018 - 2.3.1.201 1.152e-202 644.0
BYD3_k127_7433707_1 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 533.0
BYD3_k127_7433707_10 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000245 241.0
BYD3_k127_7433707_11 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000000000124 220.0
BYD3_k127_7433707_12 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000009782 203.0
BYD3_k127_7433707_13 Transposase zinc-ribbon domain K07488 - - 0.00000000000000000000000000000000000000000001956 171.0
BYD3_k127_7433707_14 PFAM Spore coat protein CotH - - - 0.0000000000000000000000000000000000000000001396 179.0
BYD3_k127_7433707_15 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000000000000000000947 165.0
BYD3_k127_7433707_16 VTC domain - - - 0.0000000000000000000000000000000000002547 150.0
BYD3_k127_7433707_17 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000003048 124.0
BYD3_k127_7433707_18 O-Antigen ligase - - - 0.00000000000000000000000001751 124.0
BYD3_k127_7433707_19 Glycosyltransferase Family 4 K16697 - - 0.000000000000000000000003812 117.0
BYD3_k127_7433707_2 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 456.0
BYD3_k127_7433707_20 cellulase activity K01195,K01201 - 3.2.1.31,3.2.1.45 0.000000002831 70.0
BYD3_k127_7433707_3 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 408.0
BYD3_k127_7433707_4 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 310.0
BYD3_k127_7433707_5 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 294.0
BYD3_k127_7433707_6 polysaccharide catabolic process K03478 - 3.5.1.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000723 288.0
BYD3_k127_7433707_7 Glycosyltransferase like family 2 K16557 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001295 276.0
BYD3_k127_7433707_8 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000001623 252.0
BYD3_k127_7433707_9 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000004741 240.0
BYD3_k127_751222_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.49e-248 777.0
BYD3_k127_751222_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 611.0
BYD3_k127_751222_10 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 291.0
BYD3_k127_751222_11 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000002609 262.0
BYD3_k127_751222_12 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005539 258.0
BYD3_k127_751222_13 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.0000000000000000000000000000000000000000000000000000000005206 207.0
BYD3_k127_751222_14 CO dehydrogenase flavoprotein C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000001241 208.0
BYD3_k127_751222_15 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.00000000000000000000000000000000000000000000000000000002484 208.0
BYD3_k127_751222_16 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000003014 208.0
BYD3_k127_751222_17 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.0000000000000000000000000000000000000000000000007458 184.0
BYD3_k127_751222_18 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000002161 173.0
BYD3_k127_751222_19 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS - - - 0.000000000000000000000000000000000000000000002455 169.0
BYD3_k127_751222_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 549.0
BYD3_k127_751222_20 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000000000000000000000000832 164.0
BYD3_k127_751222_21 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000002067 160.0
BYD3_k127_751222_22 SCO1/SenC K07152 - - 0.000000000000000000000000000025 124.0
BYD3_k127_751222_23 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic K02051 - - 0.0000000000000000000000005139 117.0
BYD3_k127_751222_24 PTS HPr component phosphorylation site K11189 - - 0.0000000000000000000005109 99.0
BYD3_k127_751222_25 OstA-like protein K09774 - - 0.000000000000004177 83.0
BYD3_k127_751222_26 - - - - 0.00000003104 64.0
BYD3_k127_751222_27 NMT1-like family K02051 - - 0.000001662 59.0
BYD3_k127_751222_3 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 469.0
BYD3_k127_751222_4 SIS domain K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 385.0
BYD3_k127_751222_5 PFAM DAHP synthetase I KDSA K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 361.0
BYD3_k127_751222_6 Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate and vanillate K01612,K16874 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044464 4.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 355.0
BYD3_k127_751222_7 Belongs to the UbiD family K16874 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009747 342.0
BYD3_k127_751222_8 PFAM ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008697 304.0
BYD3_k127_751222_9 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 303.0
BYD3_k127_7515252_0 DNA binding domain - - - 0.0000009622 53.0
BYD3_k127_752645_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 4.625e-307 952.0
BYD3_k127_752645_1 Cytochrome c - - - 6.398e-222 717.0
BYD3_k127_752645_10 ABC-type branched-chain amino acid transport K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 427.0
BYD3_k127_752645_11 Belongs to the D-alanine--D-alanine ligase family K01921 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008716,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016020,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 421.0
BYD3_k127_752645_12 branched-chain amino acid transport system, permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 415.0
BYD3_k127_752645_13 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 393.0
BYD3_k127_752645_14 'glutamate synthase K00528,K03388 - 1.18.1.2,1.19.1.1,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 384.0
BYD3_k127_752645_15 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 344.0
BYD3_k127_752645_16 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 344.0
BYD3_k127_752645_17 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 337.0
BYD3_k127_752645_18 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 341.0
BYD3_k127_752645_19 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009209 328.0
BYD3_k127_752645_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 576.0
BYD3_k127_752645_20 Amidohydrolase K10220 - 4.2.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 327.0
BYD3_k127_752645_21 ribonuclease BN K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 324.0
BYD3_k127_752645_22 Protein of unknown function (DUF3750) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 295.0
BYD3_k127_752645_23 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 297.0
BYD3_k127_752645_24 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 291.0
BYD3_k127_752645_25 FAD linked oxidases, C-terminal domain K00803 - 2.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 297.0
BYD3_k127_752645_26 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008397 290.0
BYD3_k127_752645_27 PFAM ABC transporter related K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004642 275.0
BYD3_k127_752645_28 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002327 254.0
BYD3_k127_752645_29 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000002375 244.0
BYD3_k127_752645_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 547.0
BYD3_k127_752645_30 abc transporter atp-binding protein K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000004267 240.0
BYD3_k127_752645_31 oxidoreductase activity, acting on diphenols and related substances as donors K02636,K03886 - 1.10.9.1 0.000000000000000000000000000000000000000000000000000000002982 203.0
BYD3_k127_752645_32 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000007667 206.0
BYD3_k127_752645_33 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000013 193.0
BYD3_k127_752645_34 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000009659 203.0
BYD3_k127_752645_35 Reverse transcriptase-like K03469,K06864 - 3.1.26.4 0.0000000000000000000000000000000000001828 145.0
BYD3_k127_752645_36 POTRA domain, FtsQ-type K03589 - - 0.0000000000000000000000000000000000192 145.0
BYD3_k127_752645_37 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000008321 134.0
BYD3_k127_752645_38 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000003024 141.0
BYD3_k127_752645_39 amine dehydrogenase activity - - - 0.00000000000000000000000000000001021 143.0
BYD3_k127_752645_4 UDP-N-acetylmuramate-L-alanine ligase activity K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 545.0
BYD3_k127_752645_40 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000000000000000000004962 138.0
BYD3_k127_752645_41 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000001311 129.0
BYD3_k127_752645_42 Class II aldolase K18613 GO:0003674,GO:0003824,GO:0005488,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009111,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0017144,GO:0030145,GO:0034641,GO:0042365,GO:0042737,GO:0042816,GO:0042820,GO:0043167,GO:0043169,GO:0044237,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0047431,GO:0071704,GO:0072524,GO:0072526,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 4.1.1.51 0.000000000000000000000000001106 121.0
BYD3_k127_752645_43 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000009753 119.0
BYD3_k127_752645_44 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000001057 111.0
BYD3_k127_752645_45 AsmA-like C-terminal region K07289 - - 0.00000000000000005181 95.0
BYD3_k127_752645_46 - - - - 0.00000000000001289 79.0
BYD3_k127_752645_47 - - - - 0.0000000000002225 74.0
BYD3_k127_752645_49 antisigma factor binding K04749 - - 0.0000000005318 65.0
BYD3_k127_752645_5 PASTA domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 554.0
BYD3_k127_752645_50 Evidence 5 No homology to any previously reported sequences - - - 0.0000000106 61.0
BYD3_k127_752645_51 Glycosyltransferase family 87 - - - 0.000009517 58.0
BYD3_k127_752645_6 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 463.0
BYD3_k127_752645_7 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 449.0
BYD3_k127_752645_8 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 445.0
BYD3_k127_752645_9 Cytochrome b(N-terminal)/b6/petB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 426.0
BYD3_k127_7550076_0 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 458.0
BYD3_k127_7550076_1 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009154 442.0
BYD3_k127_7550076_10 PFAM secretion protein HlyD family protein K03543 - - 0.0000000000000000000000000000000000000000000001371 185.0
BYD3_k127_7550076_11 deacetylase K22278 - 3.5.1.104 0.0000000000000000000000000000000004738 146.0
BYD3_k127_7550076_12 Domain of unknown function (DUF1989) K09967 - - 0.0000000000000000000000000000005739 130.0
BYD3_k127_7550076_13 Protein of unknown function (DUF3891) - - - 0.000000000000000000000001929 113.0
BYD3_k127_7550076_14 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000005053 102.0
BYD3_k127_7550076_15 NMT1-like family K02051 - - 0.00000000000000000000005589 111.0
BYD3_k127_7550076_16 NMT1-like family K02051 - - 0.000000000000000000006023 104.0
BYD3_k127_7550076_17 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.000000000000000001378 94.0
BYD3_k127_7550076_18 DnaJ molecular chaperone homology domain K05516 - - 0.000000000001297 78.0
BYD3_k127_7550076_19 ABC transporter substrate-binding protein K02051 - - 0.000000000001409 78.0
BYD3_k127_7550076_2 Acetyl xylan esterase (AXE1) K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 357.0
BYD3_k127_7550076_20 nuclear chromosome segregation - - - 0.000000001216 68.0
BYD3_k127_7550076_3 PAS PAC sensor hybrid histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008742 342.0
BYD3_k127_7550076_4 TIGRFAM drug resistance transporter, EmrB QacA subfamily K03446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003502 291.0
BYD3_k127_7550076_5 TIM-barrel fold metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002732 267.0
BYD3_k127_7550076_6 PFAM ABC-2 type transporter K09694 - - 0.000000000000000000000000000000000000000000000000000002474 201.0
BYD3_k127_7550076_7 metal-dependent hydrolase of the TIM-barrel fold K07045 - - 0.0000000000000000000000000000000000000000000000000002251 199.0
BYD3_k127_7550076_8 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000002268 195.0
BYD3_k127_7550076_9 metal-dependent hydrolase of the TIM-barrel fold K07045 - - 0.00000000000000000000000000000000000000000000002853 183.0
BYD3_k127_7633491_0 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004757 477.0
BYD3_k127_7633491_1 Helix-turn-helix domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 412.0
BYD3_k127_7633491_10 positive regulation of growth - GO:0008150,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0065007 - 0.000009893 50.0
BYD3_k127_7633491_11 zinc ion binding - - - 0.0002478 46.0
BYD3_k127_7633491_12 Transcriptional regulator - GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010035,GO:0010038,GO:0010288,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032791,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046870,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097063,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0007856 46.0
BYD3_k127_7633491_2 acetyl-coa acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005691 313.0
BYD3_k127_7633491_3 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006585 298.0
BYD3_k127_7633491_4 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000002172 212.0
BYD3_k127_7633491_5 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.000000000000000000000000000000000000002833 150.0
BYD3_k127_7633491_6 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.00000000000000000000000000000003229 132.0
BYD3_k127_7633491_7 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000008648 95.0
BYD3_k127_7633491_8 NAD(P)H-binding - - - 0.0000000000000003667 78.0
BYD3_k127_7633491_9 - - - - 0.00000000003634 68.0
BYD3_k127_7686670_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03694,K03695 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.0 1169.0
BYD3_k127_7686670_1 Helix-hairpin-helix containing domain K03581 - 3.1.11.5 3.837e-209 673.0
BYD3_k127_7686670_10 Circadian clock protein KaiC K08482 - - 0.00000000000000000000000000000000000002879 153.0
BYD3_k127_7686670_11 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000001376 143.0
BYD3_k127_7686670_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K01719,K13542 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107,4.1.1.37,4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 457.0
BYD3_k127_7686670_3 Transporter associated domain K03699,K06189 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000791 417.0
BYD3_k127_7686670_4 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006577 374.0
BYD3_k127_7686670_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007621 372.0
BYD3_k127_7686670_6 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002108 287.0
BYD3_k127_7686670_7 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006939 278.0
BYD3_k127_7686670_8 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0046148,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000008085 262.0
BYD3_k127_7686670_9 Catalyzes the conversion of maleate to fumarate K01799,K06033 - 4.1.1.76,5.2.1.1 0.0000000000000000000000000000000000000000006178 166.0
BYD3_k127_7723296_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 583.0
BYD3_k127_7723296_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 459.0
BYD3_k127_7723296_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001648 228.0
BYD3_k127_7723296_11 metal-dependent hydrolase of the TIM-barrel fold - - - 0.000000000000000000000000000000000000000000000000000000000000001834 233.0
BYD3_k127_7723296_12 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000006021 205.0
BYD3_k127_7723296_13 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000002517 197.0
BYD3_k127_7723296_14 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000004083 194.0
BYD3_k127_7723296_15 PFAM Amidohydrolase 2 - - - 0.000000000000000000000000000000000000000000000004298 184.0
BYD3_k127_7723296_16 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000001469 174.0
BYD3_k127_7723296_17 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000002143 156.0
BYD3_k127_7723296_18 DNA helicase K03656,K03657 - 3.6.4.12 0.0000000000000000000000000000000111 146.0
BYD3_k127_7723296_19 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000000000000001468 85.0
BYD3_k127_7723296_2 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 433.0
BYD3_k127_7723296_20 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000003738 83.0
BYD3_k127_7723296_21 Arylsulfotransferase (ASST) - - - 0.0001514 48.0
BYD3_k127_7723296_3 COG0747 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 437.0
BYD3_k127_7723296_4 Rieske (2Fe-2S) domain-containing protein K15060 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 412.0
BYD3_k127_7723296_5 acetolactate synthase K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007414 377.0
BYD3_k127_7723296_6 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K15585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008949 350.0
BYD3_k127_7723296_7 Transcriptional regulator K03717 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 345.0
BYD3_k127_7723296_8 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 319.0
BYD3_k127_7723296_9 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002259 249.0
BYD3_k127_7813110_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 4.249e-270 843.0
BYD3_k127_7813110_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007663 526.0
BYD3_k127_7813110_10 PFAM Prenyltransferase squalene oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000001815 229.0
BYD3_k127_7813110_11 PFAM amidohydrolase 2 K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000008639 227.0
BYD3_k127_7813110_12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000001466 179.0
BYD3_k127_7813110_13 Zn-dependent hydrolases of the - - - 0.0000000000000000000000000000000000000000000008084 177.0
BYD3_k127_7813110_14 Domain of unknown function (DUF4175) - - - 0.0000000000000000000000000000000000147 155.0
BYD3_k127_7813110_15 - - - - 0.000000000000000000000000001326 121.0
BYD3_k127_7813110_16 Alpha beta hydrolase - - - 0.00000000000000000000000001333 120.0
BYD3_k127_7813110_17 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.00000000000000000000000001566 122.0
BYD3_k127_7813110_18 - - - - 0.00000000000000001239 88.0
BYD3_k127_7813110_19 Amidohydrolase - - - 0.00000000000000001412 95.0
BYD3_k127_7813110_2 ATPase associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000901 426.0
BYD3_k127_7813110_20 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000001682 68.0
BYD3_k127_7813110_22 Putative peptidoglycan binding domain - - - 0.000000008558 64.0
BYD3_k127_7813110_23 SOS response associated peptidase (SRAP) - - - 0.00001043 49.0
BYD3_k127_7813110_3 Putative glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 373.0
BYD3_k127_7813110_4 Belongs to the TPP enzyme family K04103 - 4.1.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008659 340.0
BYD3_k127_7813110_5 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004362 293.0
BYD3_k127_7813110_6 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001839 297.0
BYD3_k127_7813110_7 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007574 285.0
BYD3_k127_7813110_8 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002985 259.0
BYD3_k127_7813110_9 Aerotolerance regulator N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002651 272.0
BYD3_k127_7882766_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537,K01539 - 3.6.3.8,3.6.3.9 0.0 1231.0
BYD3_k127_7882766_1 Cbs domain K04767 - - 0.00000000000001752 76.0
BYD3_k127_7934169_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0 1382.0
BYD3_k127_7934169_1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 0.0 1085.0
BYD3_k127_7934169_10 Alpha amylase, catalytic domain K06044 - 5.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000685 456.0
BYD3_k127_7934169_11 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006948 460.0
BYD3_k127_7934169_12 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 445.0
BYD3_k127_7934169_13 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 344.0
BYD3_k127_7934169_14 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002196 276.0
BYD3_k127_7934169_15 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000006682 220.0
BYD3_k127_7934169_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.826e-320 991.0
BYD3_k127_7934169_3 Domain of unknown function (DUF3536) - - - 6.117e-302 946.0
BYD3_k127_7934169_4 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 3.882e-279 874.0
BYD3_k127_7934169_5 Alpha amylase, catalytic domain K06044 - 5.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 616.0
BYD3_k127_7934169_6 Sigma-54 interaction domain K07714,K07715 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 613.0
BYD3_k127_7934169_7 PFAM glycoside hydrolase family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 613.0
BYD3_k127_7934169_8 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 586.0
BYD3_k127_7934169_9 Elongation factor SelB, winged helix K03833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 505.0
BYD3_k127_7951174_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1080.0
BYD3_k127_7951174_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 3.677e-220 686.0
BYD3_k127_7951174_10 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000002583 196.0
BYD3_k127_7951174_11 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000001208 201.0
BYD3_k127_7951174_12 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000003165 181.0
BYD3_k127_7951174_13 Predicted permease YjgP/YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000003748 190.0
BYD3_k127_7951174_14 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000008042 154.0
BYD3_k127_7951174_15 RHS Repeat - - - 0.000000000000000000000000000000000000001862 151.0
BYD3_k127_7951174_16 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000209 130.0
BYD3_k127_7951174_17 Protein of unknown function (DUF971) K03593 - - 0.000000000000000000000001196 108.0
BYD3_k127_7951174_18 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000009978 77.0
BYD3_k127_7951174_19 - - - - 0.00000000001743 69.0
BYD3_k127_7951174_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 1.591e-197 623.0
BYD3_k127_7951174_20 - - - - 0.00000000001811 66.0
BYD3_k127_7951174_21 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000007037 64.0
BYD3_k127_7951174_22 -acetyltransferase - - - 0.000000001261 58.0
BYD3_k127_7951174_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000477 519.0
BYD3_k127_7951174_4 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008711 319.0
BYD3_k127_7951174_5 serine-type endopeptidase activity K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 305.0
BYD3_k127_7951174_6 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003459 262.0
BYD3_k127_7951174_7 Bacterial trigger factor protein (TF) C-terminus K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002147 273.0
BYD3_k127_7951174_8 PFAM permease YjgP YjgQ family protein K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000002939 238.0
BYD3_k127_7951174_9 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000003032 212.0
BYD3_k127_7956436_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1079.0
BYD3_k127_7956436_1 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis - - - 6.235e-285 885.0
BYD3_k127_7956436_11 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006207 406.0
BYD3_k127_7956436_12 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K00945,K02945,K03527 - 1.17.7.4,2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009005 343.0
BYD3_k127_7956436_13 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008394 306.0
BYD3_k127_7956436_14 Malate/L-lactate dehydrogenase K00073 - 1.1.1.350 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 316.0
BYD3_k127_7956436_15 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009853 293.0
BYD3_k127_7956436_16 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K18983 - 5.5.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000001556 267.0
BYD3_k127_7956436_17 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004424 259.0
BYD3_k127_7956436_18 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000003525 240.0
BYD3_k127_7956436_19 Glycosyl transferase family 1 - - - 0.000000000000000000000000000000000000000000000000000000169 208.0
BYD3_k127_7956436_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 3.579e-254 789.0
BYD3_k127_7956436_20 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000001069 179.0
BYD3_k127_7956436_21 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000009743 173.0
BYD3_k127_7956436_22 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000007371 163.0
BYD3_k127_7956436_23 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000004504 135.0
BYD3_k127_7956436_24 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000008555 126.0
BYD3_k127_7956436_25 Class ii aldolase K01628 - 4.1.2.17 0.000000000000000000000000000011 128.0
BYD3_k127_7956436_26 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000007246 128.0
BYD3_k127_7956436_27 Cupin domain - - - 0.0000000000000000000000000002409 120.0
BYD3_k127_7956436_28 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000002397 116.0
BYD3_k127_7956436_29 EamA-like transporter family - - - 0.0000000000000000000004157 106.0
BYD3_k127_7956436_3 ATP synthase alpha/beta chain, C terminal domain K02111 - 3.6.3.14 7.05e-241 752.0
BYD3_k127_7956436_30 Polymer-forming cytoskeletal - - - 0.0000000000000001841 87.0
BYD3_k127_7956436_31 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000003168 86.0
BYD3_k127_7956436_32 'Cold-shock' DNA-binding domain - - - 0.000000000001865 70.0
BYD3_k127_7956436_33 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000003851 60.0
BYD3_k127_7956436_34 Trehalose-phosphatase K16055 - 2.4.1.15,3.1.3.12 0.00000006157 55.0
BYD3_k127_7956436_4 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1.891e-240 758.0
BYD3_k127_7956436_5 Protein of unknown function, DUF255 K06888 - - 1.424e-227 724.0
BYD3_k127_7956436_6 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 2.475e-221 694.0
BYD3_k127_7956436_7 Ammonium Transporter Family K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 602.0
BYD3_k127_7956436_8 ethanolamine utilization protein K04019 GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0030091,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009,GO:0071704,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003867 583.0
BYD3_k127_7958001_0 benzoyl-CoA reductase K04113 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 305.0
BYD3_k127_7958001_1 NAD dependent epimerase/dehydratase family K07535 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005833 277.0
BYD3_k127_7958001_2 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001251 275.0
BYD3_k127_7958001_3 enoyl-CoA hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006131 264.0
BYD3_k127_7958001_4 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009993 257.0
BYD3_k127_7958001_5 PFAM ATPase, BadF BadG BcrA BcrD type - - - 0.000000000000000000000000000000000000000000000000000000000000000007947 234.0
BYD3_k127_7958001_6 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000007407 231.0
BYD3_k127_7958001_7 PFAM short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000001187 230.0
BYD3_k127_7958001_8 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000004765 117.0
BYD3_k127_7979717_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 389.0
BYD3_k127_7979717_1 Catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 357.0
BYD3_k127_7979717_10 - - - - 0.00003421 49.0
BYD3_k127_7979717_2 inositol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005102 318.0
BYD3_k127_7979717_3 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001387 274.0
BYD3_k127_7979717_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007796 270.0
BYD3_k127_7979717_5 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000005151 217.0
BYD3_k127_7979717_6 NMT1-like family - - - 0.000000000000000000000000000000000003928 150.0
BYD3_k127_7979717_7 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000008978 122.0
BYD3_k127_7979717_8 Protein of unknown function (DUF559) K07316 - 2.1.1.72 0.00000000000000000000000000009699 119.0
BYD3_k127_7979717_9 - - - - 0.0000000006841 62.0
BYD3_k127_8016425_0 aldehyde-lyase activity K01621 - 4.1.2.22,4.1.2.9 0.0 1443.0
BYD3_k127_8016425_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1227.0
BYD3_k127_8016425_10 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000004984 181.0
BYD3_k127_8016425_11 Short repeat of unknown function (DUF308) - - - 0.0000000000000000000000000000000000000000000001972 172.0
BYD3_k127_8016425_12 wide pore channel activity - - - 0.00000000000000000000000000000000000001005 148.0
BYD3_k127_8016425_13 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000003713 97.0
BYD3_k127_8016425_14 Sodium/calcium exchanger protein K07301 - - 0.00000000005596 66.0
BYD3_k127_8016425_15 Belongs to the P(II) protein family K04751,K04752 - - 0.00000002452 60.0
BYD3_k127_8016425_2 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 1.344e-195 618.0
BYD3_k127_8016425_3 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 463.0
BYD3_k127_8016425_4 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009894 361.0
BYD3_k127_8016425_5 Predicted membrane protein (DUF2238) K08984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 349.0
BYD3_k127_8016425_6 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 303.0
BYD3_k127_8016425_7 Protein of unknown function (DUF1207) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 304.0
BYD3_k127_8016425_8 Phosphoglycerate mutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004793 268.0
BYD3_k127_8016425_9 Gluconokinase K00851 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0046316 2.7.1.12 0.0000000000000000000000000000000000000000000000000004338 192.0
BYD3_k127_8102030_0 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000005743 237.0
BYD3_k127_8102030_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000002853 243.0
BYD3_k127_8102030_2 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000002341 228.0
BYD3_k127_8102030_3 Protein of unknown function (DUF1152) - - - 0.0000000000000000000000000000000000000000000000000000003944 206.0
BYD3_k127_8102030_4 Alpha beta hydrolase - - - 0.00000000000000000000000689 111.0
BYD3_k127_8102030_5 Domain of unknown function (DUF1992) - - - 0.0000001378 54.0
BYD3_k127_8161241_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 335.0
BYD3_k127_8161241_1 AMP-binding enzyme K01895 GO:0003674,GO:0003824,GO:0003996,GO:0004321,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0015645,GO:0016053,GO:0016405,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0016874,GO:0016877,GO:0016878,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901576 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003466 286.0
BYD3_k127_8161241_2 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000002874 175.0
BYD3_k127_8161241_3 Alpha beta hydrolase - - - 0.000000000000000000000002285 108.0
BYD3_k127_8277801_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 2.584e-262 827.0
BYD3_k127_8277801_1 ATP-grasp domain K01905,K22224 - 6.2.1.13 4.144e-208 662.0
BYD3_k127_8277801_10 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000004567 150.0
BYD3_k127_8277801_11 Tetratricopeptide repeat - - - 0.00000000000000000000000000001284 127.0
BYD3_k127_8277801_12 PFAM Transglycosylase-associated protein - - - 0.00000000000000000000000000001392 119.0
BYD3_k127_8277801_13 - - - - 0.0000000000000000000000007634 107.0
BYD3_k127_8277801_14 PFAM cytoplasmic chaperone TorD family protein - - - 0.0000000000000000000001722 106.0
BYD3_k127_8277801_15 Response regulator receiver - - - 0.0000000000000000000001907 101.0
BYD3_k127_8277801_16 PFAM Polysulphide reductase, NrfD K04015 - - 0.000000000000002447 89.0
BYD3_k127_8277801_17 cytochrome c K00406 - - 0.0000000000002508 75.0
BYD3_k127_8277801_18 DNA binding domain, excisionase family - - - 0.0000000004143 63.0
BYD3_k127_8277801_19 ABC transporter substrate binding protein K01989 - - 0.0000006053 55.0
BYD3_k127_8277801_2 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 613.0
BYD3_k127_8277801_20 Iron-containing redox enzyme K06137 - 1.3.3.11 0.000002342 58.0
BYD3_k127_8277801_21 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.000002458 54.0
BYD3_k127_8277801_22 Sel1 domain protein repeat-containing protein K07126,K13582 - - 0.000003178 56.0
BYD3_k127_8277801_3 Belongs to the UbiD family K03182,K16874 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005619 451.0
BYD3_k127_8277801_4 4Fe-4S dicluster domain K00124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008113 303.0
BYD3_k127_8277801_5 Pfam Cupin K00450,K11948 - 1.13.11.38,1.13.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003336 282.0
BYD3_k127_8277801_6 PFAM Na-Ca exchanger integrin-beta4 peptidase-like FG-GAP K20276 - - 0.00000000000000000000000000000000000000000000000000000000000002697 228.0
BYD3_k127_8277801_7 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000008578 218.0
BYD3_k127_8277801_8 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000006222 192.0
BYD3_k127_8277801_9 thiamine-containing compound biosynthetic process K04102 - 4.1.1.55 0.0000000000000000000000000000000000000000000000001854 190.0
BYD3_k127_832331_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 593.0
BYD3_k127_832331_1 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 552.0
BYD3_k127_832331_10 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs K00087,K03519 - 1.17.1.4,1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000002355 236.0
BYD3_k127_832331_11 Phosphoglycerate mutase family K15634 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000006382 216.0
BYD3_k127_832331_12 Sugar (and other) transporter K07552 - - 0.00000000000000000000000000000000000000000000000000000000008326 219.0
BYD3_k127_832331_13 major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000001273 217.0
BYD3_k127_832331_14 ribonucleoside-diphosphate reductase activity K07735 - - 0.00000000000000000000000000000000000000000000000000000939 196.0
BYD3_k127_832331_15 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000008939 178.0
BYD3_k127_832331_16 3-hydroxyanthranilic acid dioxygenase K00452 - 1.13.11.6 0.0000000000000000000000000000000000000000000005899 173.0
BYD3_k127_832331_17 to the N-terminal domain of Lon protease K01338,K07157 - 3.4.21.53 0.00000000000000000000000000000000000000000004194 169.0
BYD3_k127_832331_18 Pfam:Pyridox_oxidase - - - 0.00000000000000000000000000000000000000009729 155.0
BYD3_k127_832331_19 - - - - 0.0000000000000000000000000000000000000009819 153.0
BYD3_k127_832331_2 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 449.0
BYD3_k127_832331_20 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000005586 154.0
BYD3_k127_832331_21 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.0000000000000000000000000000000000008989 154.0
BYD3_k127_832331_22 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000002789 140.0
BYD3_k127_832331_23 protein possibly involved in utilization of glycolate and propanediol - - - 0.000000000000000000000000000000007517 134.0
BYD3_k127_832331_24 pyridoxamine 5-phosphate K07006 - - 0.000000000000000000000000000000268 129.0
BYD3_k127_832331_25 NUDIX domain - - - 0.000000000000000000000000271 111.0
BYD3_k127_832331_26 PFAM amidohydrolase 2 K03392 - 4.1.1.45 0.00000000000000000000000933 114.0
BYD3_k127_832331_27 Hydantoin racemase K16841 - 5.1.99.3 0.000000000000005609 85.0
BYD3_k127_832331_28 Glyoxalase-like domain - - - 0.0000000000006545 75.0
BYD3_k127_832331_29 Iron-containing redox enzyme K06137 - 1.3.3.11 0.00000001875 64.0
BYD3_k127_832331_3 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 465.0
BYD3_k127_832331_30 Domain of unknown function (DUF4349) - - - 0.0000003349 62.0
BYD3_k127_832331_31 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000006753 60.0
BYD3_k127_832331_4 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 428.0
BYD3_k127_832331_5 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006872 370.0
BYD3_k127_832331_6 Conserved carboxylase domain K01571 - 4.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007196 372.0
BYD3_k127_832331_7 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001215 292.0
BYD3_k127_832331_8 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003806 274.0
BYD3_k127_832331_9 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007224 258.0
BYD3_k127_8450672_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 2.788e-236 742.0
BYD3_k127_8450672_1 Pyridine nucleotide-disulphide oxidoreductase - - - 1.085e-222 704.0
BYD3_k127_8450672_10 Rieske [2Fe-2S] domain K00411,K02636,K03886 - 1.10.2.2,1.10.9.1 0.000000000000000000000000000000000000000000000000001172 187.0
BYD3_k127_8450672_11 response to oxidative stress K04063 - - 0.000000000000000000000000000021 123.0
BYD3_k127_8450672_12 Sulphur transport K07112 - - 0.00000000000000000000000000173 116.0
BYD3_k127_8450672_13 - - - - 0.000000000000000000000000003587 115.0
BYD3_k127_8450672_14 denitrification pathway K02569 - - 0.0000000000000000000000303 107.0
BYD3_k127_8450672_15 Sulphur transport K07112 - - 0.00000000000000000000005692 105.0
BYD3_k127_8450672_16 CBS domain K04767 - - 0.00000000000000000000427 104.0
BYD3_k127_8450672_17 Sulphur transport K07112 - - 0.00000000000000001093 85.0
BYD3_k127_8450672_18 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.000000000001977 67.0
BYD3_k127_8450672_19 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.000000000006014 66.0
BYD3_k127_8450672_2 CobW/HypB/UreG, nucleotide-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 556.0
BYD3_k127_8450672_20 CoA binding domain K06929 - - 0.00000000002598 74.0
BYD3_k127_8450672_21 Cytochrome c K12263 - - 0.00000003319 61.0
BYD3_k127_8450672_22 SNARE associated Golgi protein K01077 - 3.1.3.1 0.00000008066 61.0
BYD3_k127_8450672_23 Cytochrome c K00406,K08906 - - 0.0000001182 58.0
BYD3_k127_8450672_24 Nitric oxide reductase large subunit K04561 - 1.7.2.5 0.000000237 53.0
BYD3_k127_8450672_25 Putative ATP-dependant zinc protease - - - 0.0000002959 56.0
BYD3_k127_8450672_26 Sulphur transport K07112 - - 0.000002092 49.0
BYD3_k127_8450672_27 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.0001668 44.0
BYD3_k127_8450672_28 - - - - 0.0002115 50.0
BYD3_k127_8450672_3 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007366 469.0
BYD3_k127_8450672_4 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004835 423.0
BYD3_k127_8450672_5 Cytochrome c554 and c-prime K03620 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 420.0
BYD3_k127_8450672_6 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 412.0
BYD3_k127_8450672_7 Sugar-transfer associated ATP-grasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007355 390.0
BYD3_k127_8450672_8 PFAM sodium calcium exchanger membrane region K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000425 349.0
BYD3_k127_8450672_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000002907 217.0
BYD3_k127_8461938_0 Selenoprotein B, glycine betaine sarcosine D-proline reductase family K10672 - 1.21.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009492 279.0
BYD3_k127_8461938_1 PFAM Glycine sarcosine betaine reductase component B subunits - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003556 276.0
BYD3_k127_8461938_2 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000009189 160.0
BYD3_k127_8461938_3 enoyl-(acyl-carrier-protein) reductase II K02371 - 1.3.1.9 0.00000000000003071 78.0
BYD3_k127_8464017_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1069.0
BYD3_k127_8464017_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 3.775e-300 940.0
BYD3_k127_8464017_10 Trypsin K08070 - 1.3.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 421.0
BYD3_k127_8464017_11 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 391.0
BYD3_k127_8464017_12 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 382.0
BYD3_k127_8464017_13 TonB dependent receptor K02014,K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006303 365.0
BYD3_k127_8464017_14 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 342.0
BYD3_k127_8464017_15 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 346.0
BYD3_k127_8464017_16 Methionine synthase K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 321.0
BYD3_k127_8464017_17 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 302.0
BYD3_k127_8464017_18 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 298.0
BYD3_k127_8464017_19 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007033 297.0
BYD3_k127_8464017_2 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 8.861e-289 911.0
BYD3_k127_8464017_20 Nitrile hydratase, alpha chain K01721 - 4.2.1.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001102 286.0
BYD3_k127_8464017_21 Orotidine 5'-phosphate decarboxylase / HUMPS family K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000004382 269.0
BYD3_k127_8464017_22 Vitamin K epoxide reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005063 252.0
BYD3_k127_8464017_23 Putative glutamine amidotransferase K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009821 269.0
BYD3_k127_8464017_24 PFAM ABC transporter K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000002397 243.0
BYD3_k127_8464017_25 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000001453 244.0
BYD3_k127_8464017_26 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000001806 243.0
BYD3_k127_8464017_27 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000004484 215.0
BYD3_k127_8464017_28 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000226 215.0
BYD3_k127_8464017_29 Mo-molybdopterin cofactor metabolic process K03638 - 2.7.7.75 0.000000000000000000000000000000000000000000000000001027 190.0
BYD3_k127_8464017_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 2.291e-227 717.0
BYD3_k127_8464017_30 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000007249 193.0
BYD3_k127_8464017_31 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000000000000000000000000000002892 175.0
BYD3_k127_8464017_32 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000002872 171.0
BYD3_k127_8464017_33 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000005506 171.0
BYD3_k127_8464017_34 Membrane transport protein K07088 - - 0.000000000000000000000000000000000000000001524 167.0
BYD3_k127_8464017_35 COG0314 Molybdopterin converting factor, large subunit K03635 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0030366,GO:0032324,GO:0034641,GO:0042278,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.8.1.12 0.000000000000000000000000000000000000000006413 158.0
BYD3_k127_8464017_36 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000000000000000000000000006227 160.0
BYD3_k127_8464017_37 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000001017 154.0
BYD3_k127_8464017_38 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000005054 151.0
BYD3_k127_8464017_39 SCO1/SenC K07152 - - 0.00000000000000000000000000000000000001407 153.0
BYD3_k127_8464017_4 Belongs to the peptidase S16 family - - - 3.647e-225 723.0
BYD3_k127_8464017_40 R3H domain protein K06346 - - 0.00000000000000000000000000000000000003905 153.0
BYD3_k127_8464017_41 Belongs to the small heat shock protein (HSP20) family - - - 0.00000000000000000000000000000004563 130.0
BYD3_k127_8464017_42 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000006323 126.0
BYD3_k127_8464017_43 von Willebrand factor type A - - - 0.000000000000000000000000000271 132.0
BYD3_k127_8464017_44 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000004414 105.0
BYD3_k127_8464017_45 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000004455 105.0
BYD3_k127_8464017_46 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000005519 91.0
BYD3_k127_8464017_47 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000198 89.0
BYD3_k127_8464017_48 PFAM molybdopterin biosynthesis MoaE protein K03635,K21142 - 2.8.1.12 0.0000000000000000533 83.0
BYD3_k127_8464017_49 RecX family - - - 0.0000000000000002554 85.0
BYD3_k127_8464017_5 Asparaginase - - - 5.99e-198 632.0
BYD3_k127_8464017_50 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000004385 73.0
BYD3_k127_8464017_51 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00019,K07535 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.30 0.0000000000005584 70.0
BYD3_k127_8464017_52 Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.000000000009106 69.0
BYD3_k127_8464017_53 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000001467 74.0
BYD3_k127_8464017_54 KR domain K00059 - 1.1.1.100 0.00000000004492 69.0
BYD3_k127_8464017_55 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.000000001145 64.0
BYD3_k127_8464017_56 COG0607 Rhodanese-related sulfurtransferase - - - 0.00000002817 55.0
BYD3_k127_8464017_57 - - - - 0.000001632 57.0
BYD3_k127_8464017_58 Domain of unknown function (DUF4430) - - - 0.000007993 53.0
BYD3_k127_8464017_59 Rhodanese Homology Domain - - - 0.00001029 52.0
BYD3_k127_8464017_6 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009055,GO:0009058,GO:0009240,GO:0009987,GO:0016020,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0022900,GO:0030312,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044464,GO:0046429,GO:0046490,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0052592,GO:0055114,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009714 534.0
BYD3_k127_8464017_60 Enoyl-(Acyl carrier protein) reductase - - - 0.00009303 49.0
BYD3_k127_8464017_7 AAA domain K02232 - 6.3.5.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 540.0
BYD3_k127_8464017_8 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 529.0
BYD3_k127_8464017_9 AAA domain K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 434.0
BYD3_k127_8466538_0 Non-ribosomal peptide synthetase modules and related - - - 0.0 1571.0
BYD3_k127_8466538_1 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955 - 2.7.1.25,2.7.7.4 1.463e-250 790.0
BYD3_k127_8466538_10 AAA domain K02282 - - 0.000000000000000000000000000000000000000000000003514 188.0
BYD3_k127_8466538_11 PFAM Type II secretion system F K12511 - - 0.00000000000000000000000000000000000000000000553 175.0
BYD3_k127_8466538_12 PFAM Type II secretion system F K12510 - - 0.00000000000000000000000000000000000000000004157 175.0
BYD3_k127_8466538_13 protein histidine kinase activity K03407,K07678 - 2.7.13.3 0.00000000000000000000000000000000000000000205 171.0
BYD3_k127_8466538_14 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.0000000000000000000000000000000000000003288 159.0
BYD3_k127_8466538_15 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000005328 106.0
BYD3_k127_8466538_16 Type II secretory pathway, prepilin signal peptidase PulO K02278 - 3.4.23.43 0.000000000000000102 87.0
BYD3_k127_8466538_2 ABC-type multidrug transport system ATPase and permease K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 615.0
BYD3_k127_8466538_3 PFAM type II secretion system protein E K02283,K03609 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000741 568.0
BYD3_k127_8466538_4 IMG reference gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008952 486.0
BYD3_k127_8466538_5 NAD(P)H-binding K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 349.0
BYD3_k127_8466538_6 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000749 298.0
BYD3_k127_8466538_7 sulfate adenylyltransferase), subunit 2 K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000001199 220.0
BYD3_k127_8466538_8 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000001694 220.0
BYD3_k127_8466538_9 Pilus formation protein N terminal region K02280 - - 0.000000000000000000000000000000000000000000000000000000003815 218.0
BYD3_k127_8566232_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 1.828e-194 618.0
BYD3_k127_8566232_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00282 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 446.0
BYD3_k127_8566232_10 Aromatic-ring-opening dioxygenase LigAB, LigA subunit - - - 0.0000000000002908 72.0
BYD3_k127_8566232_11 - - - - 0.0000000265 61.0
BYD3_k127_8566232_12 Protein of unknown function (DUF3426) - - - 0.0000002342 62.0
BYD3_k127_8566232_13 Domain of unknown function (DUF4349) - - - 0.000001431 57.0
BYD3_k127_8566232_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 417.0
BYD3_k127_8566232_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 364.0
BYD3_k127_8566232_4 Belongs to the UPF0255 family K11750 GO:0003674,GO:0003824,GO:0005575,GO:0006109,GO:0006629,GO:0008150,GO:0008152,GO:0009894,GO:0016020,GO:0016298,GO:0016787,GO:0016788,GO:0019222,GO:0043470,GO:0044238,GO:0050789,GO:0065007,GO:0071704,GO:0080090 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005728 323.0
BYD3_k127_8566232_5 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K04101,K05713 - 1.13.11.16,1.13.11.8 0.00000000000000000000000000000000000000000000000000000000001147 216.0
BYD3_k127_8566232_6 Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate K02437 GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 - 0.000000000000000000000000000000000000000000002984 170.0
BYD3_k127_8566232_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000009872 151.0
BYD3_k127_8566232_8 TonB C terminal K03832 - - 0.000000000000000004651 94.0
BYD3_k127_8566232_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000001772 72.0
BYD3_k127_8588465_0 Carboxyl transferase domain K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 1.83e-234 737.0
BYD3_k127_8588465_1 Biotin carboxylase K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000649 574.0
BYD3_k127_8588465_10 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000007705 229.0
BYD3_k127_8588465_11 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000001885 204.0
BYD3_k127_8588465_12 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000004224 202.0
BYD3_k127_8588465_13 Phenylacetic acid - - - 0.000000000000000000000000000000000001256 147.0
BYD3_k127_8588465_14 SnoaL-like domain K06893 - - 0.00000000000000000000000000000000001386 140.0
BYD3_k127_8588465_15 Biotin-requiring enzyme - - - 0.0000000000000000000000000000000001359 138.0
BYD3_k127_8588465_16 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 - 1.3.3.11 0.000000000000000000000000000001297 130.0
BYD3_k127_8588465_17 mttA/Hcf106 family K03116,K03117 - - 0.000000000000000115 82.0
BYD3_k127_8588465_18 HEAT repeats - - - 0.00002146 55.0
BYD3_k127_8588465_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 546.0
BYD3_k127_8588465_3 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 514.0
BYD3_k127_8588465_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 380.0
BYD3_k127_8588465_5 Metallopeptidase family M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 379.0
BYD3_k127_8588465_6 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 322.0
BYD3_k127_8588465_7 electron transfer flavoprotein, alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006458 288.0
BYD3_k127_8588465_8 Pfam Cupin K00450,K11948 - 1.13.11.38,1.13.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001875 288.0
BYD3_k127_8588465_9 Belongs to the PdaD family K02626 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006263 267.0
BYD3_k127_8597912_0 Mediates influx of magnesium ions K03284,K16074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 464.0
BYD3_k127_8597912_1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 435.0
BYD3_k127_8597912_10 Glycine reductase complex selenoprotein A K10670 - 1.21.4.2,1.21.4.3,1.21.4.4 0.000000000002716 66.0
BYD3_k127_8597912_11 HNH nucleases - - - 0.000000001667 58.0
BYD3_k127_8597912_12 Nitrate ABC transporter substrate-binding protein K02051 - - 0.00000135 60.0
BYD3_k127_8597912_13 Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress K01091 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.18 0.00009412 53.0
BYD3_k127_8597912_2 Appr-1'-p processing enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000008043 218.0
BYD3_k127_8597912_3 PFAM binding-protein-dependent transport systems inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000007648 214.0
BYD3_k127_8597912_4 amino acid ABC transporter K02029 - - 0.00000000000000000000000000000000000000000000000000007172 199.0
BYD3_k127_8597912_5 glycolate biosynthetic process K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000005735 171.0
BYD3_k127_8597912_6 ornithine cyclodeaminase activity K01750,K19244 - 1.4.1.1,4.3.1.12 0.00000000000000000000000000000000000000000004124 173.0
BYD3_k127_8597912_7 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - - - 0.00000000000000000000000000000000000002956 149.0
BYD3_k127_8597912_8 Glycine reductase complex selenoprotein A K10670 - 1.21.4.2,1.21.4.3,1.21.4.4 0.00000000000000000000000002723 111.0
BYD3_k127_8597912_9 Bacterial periplasmic substrate-binding proteins K02030,K10001 - - 0.00000000000000000000000004471 110.0
BYD3_k127_8631666_0 radical SAM domain protein - - - 1.058e-218 692.0
BYD3_k127_8631666_1 Ring hydroxylating alpha subunit (catalytic domain) K05549,K10619 - 1.14.12.10,1.14.12.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006685 494.0
BYD3_k127_8631666_10 - - - - 0.0000000000000000000000000000000000000000002609 161.0
BYD3_k127_8631666_11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K16049 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006066,GO:0006629,GO:0006706,GO:0006707,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0009056,GO:0009405,GO:0010033,GO:0014070,GO:0016042,GO:0016125,GO:0016127,GO:0016491,GO:0016701,GO:0016702,GO:0033993,GO:0036314,GO:0042221,GO:0043167,GO:0043169,GO:0044238,GO:0044281,GO:0044282,GO:0044419,GO:0046164,GO:0046872,GO:0046914,GO:0047071,GO:0050896,GO:0051213,GO:0051704,GO:0055114,GO:0070723,GO:0071704,GO:0097305,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616,GO:1901700,GO:1902652 1.13.11.25 0.00000000000000000000000000000000000000000185 168.0
BYD3_k127_8631666_12 PFAM aromatic-ring-hydroxylating dioxygenase beta subunit - - - 0.000000000001784 69.0
BYD3_k127_8631666_13 Regulatory protein, FmdB family - - - 0.000000926 55.0
BYD3_k127_8631666_15 Psort location Cytoplasmic, score - - - 0.0002798 45.0
BYD3_k127_8631666_16 Amidohydrolase K07045 - - 0.0004845 45.0
BYD3_k127_8631666_2 FAD dependent oxidoreductase K13796 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008732 462.0
BYD3_k127_8631666_3 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 430.0
BYD3_k127_8631666_4 Uncharacterized conserved protein (DUF2183) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 376.0
BYD3_k127_8631666_5 nitric oxide reductase activity K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004611 351.0
BYD3_k127_8631666_6 thiamine-containing compound biosynthetic process K04102 - 4.1.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 332.0
BYD3_k127_8631666_7 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004727 285.0
BYD3_k127_8631666_8 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002429 249.0
BYD3_k127_8631666_9 TIM-barrel fold metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000004059 198.0
BYD3_k127_8695890_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 614.0
BYD3_k127_8695890_1 transporter K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 600.0
BYD3_k127_8695890_10 COG4970 Tfp pilus assembly protein FimT K08084 - - 0.0004662 49.0
BYD3_k127_8695890_2 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005675 449.0
BYD3_k127_8695890_3 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000308 278.0
BYD3_k127_8695890_4 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000001088 210.0
BYD3_k127_8695890_5 DNA polymerase III, delta' K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000003598 199.0
BYD3_k127_8695890_6 cheY-homologous receiver domain K07668 - - 0.0000000000000000000000000003794 118.0
BYD3_k127_8695890_7 Pilus assembly protein PilX K02673 - - 0.00000000000000000000000001898 122.0
BYD3_k127_8695890_8 Pfam:N_methyl_2 - - - 0.000000001205 67.0
BYD3_k127_8695890_9 type IV pilus modification protein PilV K02671 - - 0.000001671 55.0
BYD3_k127_8813810_0 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002729 390.0
BYD3_k127_8813810_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 337.0
BYD3_k127_8813810_10 Stage II sporulation protein M - - - 0.000000000000000000000000000000001278 142.0
BYD3_k127_8813810_11 RDD family K06384 - - 0.00000000000000000000000000000007809 136.0
BYD3_k127_8813810_12 pathogenesis K02417,K02519 - - 0.000000000000000000007586 103.0
BYD3_k127_8813810_13 - - - - 0.0000000000572 74.0
BYD3_k127_8813810_2 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000004335 245.0
BYD3_k127_8813810_3 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000004968 228.0
BYD3_k127_8813810_4 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000001584 223.0
BYD3_k127_8813810_5 Cupin domain - - - 0.00000000000000000000000000000000000000000000000005543 183.0
BYD3_k127_8813810_6 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000006088 169.0
BYD3_k127_8813810_7 - - - - 0.0000000000000000000000000000000000000000007241 161.0
BYD3_k127_8813810_8 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000002123 160.0
BYD3_k127_8813810_9 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843,K02849 - - 0.0000000000000000000000000000000000006788 153.0
BYD3_k127_8828649_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007124 488.0
BYD3_k127_8828649_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000358 457.0
BYD3_k127_8828649_2 PFAM luciferase family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000556 379.0
BYD3_k127_8828649_3 PAS fold - - - 0.0000000000000000000000000000000000000007836 157.0
BYD3_k127_8828649_4 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000001355 104.0
BYD3_k127_8828649_5 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000001913 93.0
BYD3_k127_8828649_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08234 - - 0.000000000001889 71.0
BYD3_k127_8828649_7 NMT1-like family K02051 - - 0.00000000004575 74.0
BYD3_k127_8828649_8 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0000003058 61.0
BYD3_k127_8828649_9 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0000008387 59.0
BYD3_k127_8861386_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 7.427e-211 681.0
BYD3_k127_8861386_1 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 333.0
BYD3_k127_8861386_10 TIGRFAM aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K02051,K15553 - - 0.0000003382 61.0
BYD3_k127_8861386_2 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K16874 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001282 289.0
BYD3_k127_8861386_3 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000001766 272.0
BYD3_k127_8861386_4 retrograde transport, endosome to Golgi K07095 - - 0.00000000000000000000000000000000000000000000001155 175.0
BYD3_k127_8861386_5 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000895 182.0
BYD3_k127_8861386_6 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.4.2.9 0.000000000000000000000000000000000000000000324 164.0
BYD3_k127_8861386_7 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.000000000000000000000000000000000000000001024 162.0
BYD3_k127_8861386_8 PFAM amidohydrolase K07045 - - 0.000000000000000000004956 106.0
BYD3_k127_8861386_9 Abc-type nitrate sulfonate bicarbonate transport K02051,K15553 - - 0.0000000015 68.0
BYD3_k127_8892933_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1190.0
BYD3_k127_8892933_1 FAD dependent oxidoreductase K00109,K15736 - 1.1.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005593 484.0
BYD3_k127_8892933_10 Glutathione S-transferase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005826 260.0
BYD3_k127_8892933_11 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005614 262.0
BYD3_k127_8892933_12 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000007785 253.0
BYD3_k127_8892933_13 PFAM methyltransferase K15460 - 2.1.1.223 0.00000000000000000000000000000000000000000000000000000000000008566 222.0
BYD3_k127_8892933_14 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000002942 212.0
BYD3_k127_8892933_15 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000002985 186.0
BYD3_k127_8892933_16 intermembrane phospholipid transfer K07323 - - 0.00000000000000000000000000000000000000000000001037 179.0
BYD3_k127_8892933_17 ABC-type nitrate sulfonate bicarbonate transport - - - 0.00000000000000000000000000000000000000000003684 172.0
BYD3_k127_8892933_18 PFAM Mammalian cell entry related domain protein K02067 - - 0.0000000000000000000000000000000000000000000424 165.0
BYD3_k127_8892933_19 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.00000000000000000000000000000000000003228 145.0
BYD3_k127_8892933_2 Luciferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 424.0
BYD3_k127_8892933_20 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000002769 127.0
BYD3_k127_8892933_21 deacetylase K22278 - 3.5.1.104 0.0000000000000000000000000000001441 135.0
BYD3_k127_8892933_22 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000001331 125.0
BYD3_k127_8892933_23 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 - 3.1.26.11 0.000000000000000000000000000006149 124.0
BYD3_k127_8892933_24 Amidohydrolase K14333 - 4.1.1.46 0.000000000000000000000005222 113.0
BYD3_k127_8892933_25 Protein of unknown function (DUF721) - - - 0.000000000000000000444 93.0
BYD3_k127_8892933_26 aspartic-type endopeptidase activity K06985 - - 0.000000000000000001373 93.0
BYD3_k127_8892933_27 Asp Glu Hydantoin racemase family protein K01799 - 5.2.1.1 0.00002471 55.0
BYD3_k127_8892933_3 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 378.0
BYD3_k127_8892933_4 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 362.0
BYD3_k127_8892933_5 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 342.0
BYD3_k127_8892933_6 Methionyl-tRNA formyltransferase K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000928 328.0
BYD3_k127_8892933_7 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 329.0
BYD3_k127_8892933_8 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 297.0
BYD3_k127_8892933_9 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001978 284.0
BYD3_k127_91237_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.002e-258 806.0
BYD3_k127_91237_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004194 590.0
BYD3_k127_91237_10 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000001413 137.0
BYD3_k127_91237_11 ECF sigma factor K03088 - - 0.00000000000000000000000000000000003146 142.0
BYD3_k127_91237_12 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000008933 115.0
BYD3_k127_91237_13 Anti-sigma factor K07167 - - 0.00000000000000000000000001502 118.0
BYD3_k127_91237_14 Cytochrome c K12263 - - 0.000000000000000005158 88.0
BYD3_k127_91237_15 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.0000000000000001909 84.0
BYD3_k127_91237_16 Anti-sigma-K factor rskA - - - 0.00000000002616 74.0
BYD3_k127_91237_17 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 0.00001795 48.0
BYD3_k127_91237_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006406 396.0
BYD3_k127_91237_3 Transketolase, pyrimidine binding domain K21417 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 328.0
BYD3_k127_91237_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 316.0
BYD3_k127_91237_5 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 311.0
BYD3_k127_91237_6 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000008578 236.0
BYD3_k127_91237_7 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000002424 201.0
BYD3_k127_91237_8 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000002862 199.0
BYD3_k127_91237_9 - - - - 0.0000000000000000000000000000000000000002259 154.0