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Overview

ID MAG00117
Name BYD3_bin.30
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family SG8-39
Genus SCGC-AG-212-J23
Species SCGC-AG-212-J23 sp025929745
Assembly information
Completeness (%) 87.5
Contamination (%) 2.45
GC content (%) 66.0
N50 (bp) 15,304
Genome size (bp) 3,151,564

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3343

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1048169_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 5.172e-315 982.0
BYD3_k127_1048169_1 Uncharacterized protein conserved in bacteria (DUF2090) K03338 - 2.7.1.92 1.351e-300 940.0
BYD3_k127_1048169_10 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 433.0
BYD3_k127_1048169_11 KduI/IolB family K03337 - 5.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 430.0
BYD3_k127_1048169_12 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 436.0
BYD3_k127_1048169_13 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 426.0
BYD3_k127_1048169_14 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326 416.0
BYD3_k127_1048169_15 COG0765 ABC-type amino acid transport system, permease component K09971 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 439.0
BYD3_k127_1048169_16 Xylose isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 399.0
BYD3_k127_1048169_17 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 401.0
BYD3_k127_1048169_18 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 381.0
BYD3_k127_1048169_19 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 384.0
BYD3_k127_1048169_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 3.132e-244 773.0
BYD3_k127_1048169_20 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005168 377.0
BYD3_k127_1048169_21 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007058 374.0
BYD3_k127_1048169_22 acid transport K09972 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 387.0
BYD3_k127_1048169_23 acid transport system permease K09970 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 360.0
BYD3_k127_1048169_24 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 320.0
BYD3_k127_1048169_25 ABC transporter ATP-binding protein K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 316.0
BYD3_k127_1048169_26 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000161 267.0
BYD3_k127_1048169_27 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002106 274.0
BYD3_k127_1048169_28 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000004806 228.0
BYD3_k127_1048169_29 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000001634 233.0
BYD3_k127_1048169_3 DNA internalization-related competence protein ComEC Rec2 K02238 - - 1.013e-209 675.0
BYD3_k127_1048169_30 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000001717 222.0
BYD3_k127_1048169_31 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000006861 219.0
BYD3_k127_1048169_32 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000000000007208 209.0
BYD3_k127_1048169_33 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000001667 213.0
BYD3_k127_1048169_34 thiosulfate sulfurtransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000009125 212.0
BYD3_k127_1048169_35 - - - - 0.0000000000000000000000000000000000000000000000000000000009309 209.0
BYD3_k127_1048169_36 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000001587 204.0
BYD3_k127_1048169_37 Cytochrome P460 - - - 0.00000000000000000000000000000000000000000000000000000001056 206.0
BYD3_k127_1048169_38 Bacterial regulatory proteins, tetR family K09017 - - 0.000000000000000000000000000000000000000000000000001777 190.0
BYD3_k127_1048169_39 protein conserved in bacteria K09928 - - 0.000000000000000000000000000000000000000000000001364 184.0
BYD3_k127_1048169_4 TIGRFAM TRAP transporter, DctM subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 597.0
BYD3_k127_1048169_40 Histidine phosphatase superfamily (branch 1) - - - 0.000000000000000000000000000000000000000000000004324 179.0
BYD3_k127_1048169_41 Cupin domain - - - 0.00000000000000000000000000000000000000000001458 165.0
BYD3_k127_1048169_42 phosphohistidine phosphatase K08296 - - 0.00000000000000000000000000000000000000003515 156.0
BYD3_k127_1048169_43 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000000000000000000000000006845 138.0
BYD3_k127_1048169_44 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000006068 129.0
BYD3_k127_1048169_45 DoxX K15977 - - 0.000000000000000000000000000001245 126.0
BYD3_k127_1048169_46 Cupin domain - - - 0.000000000000000000000000000002623 132.0
BYD3_k127_1048169_47 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000004665 116.0
BYD3_k127_1048169_48 Dodecin K09165 - - 0.00000000000000000000000487 103.0
BYD3_k127_1048169_49 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0002019 53.0
BYD3_k127_1048169_5 Exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000665 553.0
BYD3_k127_1048169_6 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 536.0
BYD3_k127_1048169_7 PFAM oxidoreductase domain protein K19181 - 1.1.1.292 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 532.0
BYD3_k127_1048169_8 Amino acid amide ABC transporter substrate-binding protein, HAAT family K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004103 514.0
BYD3_k127_1048169_9 general L-amino acid-binding periplasmic protein AapJ K09969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008416 506.0
BYD3_k127_1083194_0 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0 1265.0
BYD3_k127_1083194_1 ABC-type Fe3 transport system permease component K02011 - - 7.386e-294 917.0
BYD3_k127_1083194_10 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 326.0
BYD3_k127_1083194_11 Oxidoreductase family, C-terminal alpha beta domain K00010 - 1.1.1.18,1.1.1.369 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006432 324.0
BYD3_k127_1083194_12 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001912 289.0
BYD3_k127_1083194_13 PFAM Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005614 282.0
BYD3_k127_1083194_14 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000011 285.0
BYD3_k127_1083194_15 Pfam:UPF0118 - - - 0.000000000000000000000000000000000000000000000000000000003341 213.0
BYD3_k127_1083194_16 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000002307 184.0
BYD3_k127_1083194_17 Phasin protein - - - 0.000000000000000000000000000000000000000000000002136 178.0
BYD3_k127_1083194_18 Etoposide-induced protein 2.4 (EI24) - - - 0.00000000000000000000000000000000000000006227 160.0
BYD3_k127_1083194_19 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000366 77.0
BYD3_k127_1083194_2 Belongs to the TPP enzyme family K03336 - 3.7.1.22 2.641e-277 863.0
BYD3_k127_1083194_20 - - - - 0.0000000000005491 74.0
BYD3_k127_1083194_21 Protein of unknown function (DUF2799) - - - 0.0000405 53.0
BYD3_k127_1083194_22 Protein of unknown function (DUF2799) - - - 0.0001541 48.0
BYD3_k127_1083194_3 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 4.319e-203 642.0
BYD3_k127_1083194_4 Bacterial extracellular solute-binding protein K02012,K11081 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 508.0
BYD3_k127_1083194_5 Cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007952 420.0
BYD3_k127_1083194_6 Oxidoreductase family, C-terminal alpha/beta domain K00010 - 1.1.1.18,1.1.1.369 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008523 421.0
BYD3_k127_1083194_7 Glutaredoxin-family domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008164 400.0
BYD3_k127_1083194_8 Xylose isomerase K03335 - 4.2.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 392.0
BYD3_k127_1083194_9 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 371.0
BYD3_k127_1169111_0 elongation factor G K02355 - - 5.215e-294 916.0
BYD3_k127_1169111_1 Tripartite tricarboxylate transporter TctA family K07793 - - 6.94e-210 662.0
BYD3_k127_1169111_10 GDP-mannose 4,6 dehydratase K18981 - 1.1.1.203 0.00000000000000000000000000000000000000000000000000000000000000000000000000006183 278.0
BYD3_k127_1169111_11 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000107 251.0
BYD3_k127_1169111_12 FCD - - - 0.00000000000000000000000000000000000000000000000000000000000001117 224.0
BYD3_k127_1169111_13 amidohydrolase 2 K18982 - 5.4.1.4 0.0000000000000000000000000000000000000000000000000000000000001865 237.0
BYD3_k127_1169111_14 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000005773 203.0
BYD3_k127_1169111_15 Tripartite tricarboxylate transporter TctB family K07794 - - 0.000000000000000000000000001859 117.0
BYD3_k127_1169111_16 Domain of unknown function (DUF4340) - - - 0.000000000000000000001492 108.0
BYD3_k127_1169111_17 Protein of unknown function (DUF2721) - - - 0.00000000000000000001256 96.0
BYD3_k127_1169111_18 ATP citrate lyase citrate-binding - - - 0.0000000001891 61.0
BYD3_k127_1169111_2 Domain of unknown function DUF21 K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007034 540.0
BYD3_k127_1169111_3 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004764 413.0
BYD3_k127_1169111_4 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 376.0
BYD3_k127_1169111_5 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 385.0
BYD3_k127_1169111_6 ABC-type uncharacterized transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 368.0
BYD3_k127_1169111_7 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 351.0
BYD3_k127_1169111_8 PFAM conserved K07795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 343.0
BYD3_k127_1169111_9 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000629 291.0
BYD3_k127_1189975_0 Phospholipase D Active site motif K01115 - 3.1.4.4 4.513e-228 728.0
BYD3_k127_1189975_1 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004927 278.0
BYD3_k127_1189975_2 thiamine-containing compound biosynthetic process K02051,K15553 - - 0.0000000000000000000000000000000000000000000000000000000000001653 231.0
BYD3_k127_1189975_3 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000003542 223.0
BYD3_k127_1189975_4 COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component - - - 0.000000000000000000000000000000000000000000000007533 177.0
BYD3_k127_1189975_5 Glutathione S-transferase, N-terminal domain - - - 0.00000000000000000000006869 104.0
BYD3_k127_1249266_0 GcpE protein K03526 - 1.17.7.1,1.17.7.3 7.374e-197 621.0
BYD3_k127_1249266_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 506.0
BYD3_k127_1249266_2 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 417.0
BYD3_k127_1249266_3 type 4 pilus biogenesis protein K02656 - - 0.00000000000000000000000000000000000000000000000000000000000000000005435 240.0
BYD3_k127_1249266_4 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000002331 228.0
BYD3_k127_1249266_5 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000007467 229.0
BYD3_k127_1249266_6 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000639 207.0
BYD3_k127_1249266_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.0000000000000000000000000000000000000000007668 172.0
BYD3_k127_1249266_8 Transcriptional regulator K15539 - - 0.0000000000000000000000000000000000004367 152.0
BYD3_k127_1253168_0 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 557.0
BYD3_k127_1253168_1 alpha/beta hydrolase fold K00641 - 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 525.0
BYD3_k127_1253168_10 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000001265 241.0
BYD3_k127_1253168_11 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000921 237.0
BYD3_k127_1253168_12 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000001229 195.0
BYD3_k127_1253168_13 Protein of unknown function (DUF3237) - - - 0.0000000000000000000000000000000000000000000000001502 184.0
BYD3_k127_1253168_14 carbon monoxide dehydrogenase K09386 - - 0.0000000000000000000000000000000000000000000000002452 183.0
BYD3_k127_1253168_15 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.0000000000000000000000000000000000000000000000003564 180.0
BYD3_k127_1253168_16 Electron transfer DM13 - - - 0.0000000000000000000000000000000000000000000001265 175.0
BYD3_k127_1253168_17 Belongs to the UPF0307 family K09889 - - 0.000000000000000000000000000000000000007054 151.0
BYD3_k127_1253168_18 but contains a N-term CheY-like response regulator receiver domain and C-term adenylyl guanylyl cyclase catalytic domain - - - 0.0000000000004512 77.0
BYD3_k127_1253168_19 ABC transporter substrate binding protein K01989 - - 0.00000002527 58.0
BYD3_k127_1253168_2 AAA domain (dynein-related subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 444.0
BYD3_k127_1253168_3 VWA domain containing CoxE-like protein K07161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 428.0
BYD3_k127_1253168_4 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 416.0
BYD3_k127_1253168_5 Malonyl-CoA decarboxylase N-terminal domain K01578 - 4.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 421.0
BYD3_k127_1253168_6 KaiC K08482 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 302.0
BYD3_k127_1253168_7 molybdenum cofactor K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004468 291.0
BYD3_k127_1253168_8 Threonyl and Alanyl tRNA synthetase second additional domain K07050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002298 258.0
BYD3_k127_1253168_9 Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002782 258.0
BYD3_k127_1261956_0 Heat shock 70 kDa protein K04043 - - 2.21e-321 994.0
BYD3_k127_1261956_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 562.0
BYD3_k127_1261956_2 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000827 381.0
BYD3_k127_1261956_3 AsmA family K07289 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 386.0
BYD3_k127_1261956_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000001367 153.0
BYD3_k127_1316800_0 poly(R)-hydroxyalkanoic acid synthase K03821 - - 5.579e-267 833.0
BYD3_k127_1316800_1 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 2.621e-262 820.0
BYD3_k127_1316800_10 COG1024 Enoyl-CoA hydratase carnithine racemase K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000135 297.0
BYD3_k127_1316800_11 amino acid transport system, ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004959 254.0
BYD3_k127_1316800_12 2-hydroxychromene-2-carboxylate isomerase K14584 - 5.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000001735 237.0
BYD3_k127_1316800_13 2-hydroxychromene-2-carboxylate isomerase K14584 - 5.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000004003 229.0
BYD3_k127_1316800_14 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000004447 158.0
BYD3_k127_1316800_15 OsmC-like protein - - - 0.000000000000000000000000000000000000002461 152.0
BYD3_k127_1316800_16 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000003941 154.0
BYD3_k127_1316800_17 transcriptional - - - 0.00000000000000000000000000000000000006391 145.0
BYD3_k127_1316800_18 thiolester hydrolase activity K17362 - - 0.00000000000000000000000000017 125.0
BYD3_k127_1316800_19 KR domain - - - 0.000000000000000000000000004803 112.0
BYD3_k127_1316800_2 COG4770 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 2.53e-229 737.0
BYD3_k127_1316800_20 Fe-S protein K06938 - - 0.000000000000002566 77.0
BYD3_k127_1316800_3 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 4.785e-198 623.0
BYD3_k127_1316800_4 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009134 603.0
BYD3_k127_1316800_5 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 540.0
BYD3_k127_1316800_6 COG1960 Acyl-CoA dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 494.0
BYD3_k127_1316800_7 HMGL-like K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 449.0
BYD3_k127_1316800_8 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 371.0
BYD3_k127_1316800_9 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 355.0
BYD3_k127_1369319_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 1.807e-207 662.0
BYD3_k127_1369319_1 3HB-oligomer hydrolase (3HBOH) K07518 - 3.1.1.22 1.42e-204 657.0
BYD3_k127_1369319_2 Belongs to the peptidase S1C family K04691,K04772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 492.0
BYD3_k127_1369319_3 Glutathione S-transferase K03599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 328.0
BYD3_k127_1369319_4 Cytochrome C1 family K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000159 267.0
BYD3_k127_1369319_5 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000003925 259.0
BYD3_k127_1369319_6 Stringent starvation protein B K03600 - - 0.00000000000000000000000000000000000000002286 158.0
BYD3_k127_1369319_7 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000003115 64.0
BYD3_k127_1387596_0 AAA ATPase domain K01768 - 4.6.1.1 2.631e-292 928.0
BYD3_k127_1387596_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 497.0
BYD3_k127_1387596_10 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005666 256.0
BYD3_k127_1387596_11 AhpC/TSA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004987 248.0
BYD3_k127_1387596_12 decarboxylase K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000001699 190.0
BYD3_k127_1387596_13 DNA mismatch repair protein, C-terminal domain K03572 - - 0.00000000000000000000000000000000000000000000000005916 184.0
BYD3_k127_1387596_14 Hydrolase, P-loop family K06925 - - 0.000000000000000000000000000000000000000006871 158.0
BYD3_k127_1387596_15 rieske 2fe-2s K00499 - 1.14.15.7 0.00000000000000000000000000000053 124.0
BYD3_k127_1387596_16 Protein of Unknown function (DUF2784) - - - 0.000000000000000000001966 102.0
BYD3_k127_1387596_2 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 426.0
BYD3_k127_1387596_3 DNA mismatch repair protein, C-terminal domain K03572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 417.0
BYD3_k127_1387596_4 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 316.0
BYD3_k127_1387596_5 IPP transferase K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 307.0
BYD3_k127_1387596_6 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007484 296.0
BYD3_k127_1387596_7 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002652 276.0
BYD3_k127_1387596_8 SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004119 266.0
BYD3_k127_1387596_9 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001224 264.0
BYD3_k127_1439363_0 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 5.473e-208 653.0
BYD3_k127_1439363_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 335.0
BYD3_k127_1439363_2 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 304.0
BYD3_k127_1439363_3 PFAM alpha beta hydrolase fold K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000001057 265.0
BYD3_k127_1439363_4 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000004178 230.0
BYD3_k127_1439363_5 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000003869 226.0
BYD3_k127_1439363_6 - - - - 0.000000000000000000000000000000000000000001056 164.0
BYD3_k127_1439363_7 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000002829 130.0
BYD3_k127_1439363_8 Protein of unknown function (DUF1161) - - - 0.0000000000000003571 81.0
BYD3_k127_1468785_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 GO:0000287,GO:0003674,GO:0003824,GO:0004738,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0019842,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363,GO:1901681 1.2.4.1 3.812e-289 897.0
BYD3_k127_1468785_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 1.647e-264 824.0
BYD3_k127_1468785_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00382,K00627 - 1.8.1.4,2.3.1.12 8.54e-201 644.0
BYD3_k127_1468785_3 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 452.0
BYD3_k127_1468785_4 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 299.0
BYD3_k127_1468785_5 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 297.0
BYD3_k127_1468785_6 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000000000000009418 160.0
BYD3_k127_1480726_0 Bacterial protein of unknown function (DUF839) K07093 - - 1.091e-225 713.0
BYD3_k127_1480726_1 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007506 374.0
BYD3_k127_1480726_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 289.0
BYD3_k127_1480726_3 Zinc dependent phospholipase C - - - 0.00000000000000000000000000000000000000000000000000000003681 205.0
BYD3_k127_1480726_4 - - - - 0.000000000000000000000000000000000000000000008659 171.0
BYD3_k127_1480726_5 Aminotransferase K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000003155 163.0
BYD3_k127_1480726_6 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000000000000000001067 153.0
BYD3_k127_1480726_7 Protein of unknown function (DUF1232) - - - 0.0000000001154 64.0
BYD3_k127_1491702_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 2397.0
BYD3_k127_1491702_1 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000818 509.0
BYD3_k127_1491702_10 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001747 246.0
BYD3_k127_1491702_11 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000000000000008441 201.0
BYD3_k127_1491702_12 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000003232 158.0
BYD3_k127_1491702_13 Thioredoxin K03671 - - 0.0000000000000000000000000000000000000006388 152.0
BYD3_k127_1491702_14 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000005439 129.0
BYD3_k127_1491702_15 - - - - 0.0000000000000000000000000005079 119.0
BYD3_k127_1491702_16 Peptidoglycan-binding lysin domain - - - 0.0000000786 59.0
BYD3_k127_1491702_17 Transglycosylase-like domain - - - 0.0000002891 61.0
BYD3_k127_1491702_19 EF hand - - - 0.0005136 48.0
BYD3_k127_1491702_2 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007593 482.0
BYD3_k127_1491702_3 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 422.0
BYD3_k127_1491702_4 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 416.0
BYD3_k127_1491702_5 Acyl-CoA dehydrogenase, C-terminal domain K16047 - 1.14.14.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 417.0
BYD3_k127_1491702_6 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000835 368.0
BYD3_k127_1491702_7 Methylenetetrahydrofolate reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000911 368.0
BYD3_k127_1491702_8 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 355.0
BYD3_k127_1491702_9 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005032 252.0
BYD3_k127_1493872_0 Amidohydrolase family K01464 - 3.5.2.2 4.943e-199 628.0
BYD3_k127_1493872_1 N-carbamoyl-D-amino acid hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000002185 211.0
BYD3_k127_1498871_0 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 587.0
BYD3_k127_1498871_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 563.0
BYD3_k127_1498871_10 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000003103 197.0
BYD3_k127_1498871_11 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000000543 194.0
BYD3_k127_1498871_12 YCII-related domain - - - 0.0000000000000000000000000000000000000000000003782 173.0
BYD3_k127_1498871_13 PFAM Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.0000000000000000000000000000000000000000001257 163.0
BYD3_k127_1498871_14 nuclease K01174 - 3.1.31.1 0.00000000000000000000000000000000001841 141.0
BYD3_k127_1498871_15 serine threonine protein kinase - - - 0.00000000000000000000000000001948 123.0
BYD3_k127_1498871_16 Protein of unknown function (DUF2905) - - - 0.0000000000000000000006976 96.0
BYD3_k127_1498871_17 methyltransferase activity - - - 0.000000000000002283 87.0
BYD3_k127_1498871_18 Diguanylate cyclase - - - 0.0000000000001285 80.0
BYD3_k127_1498871_2 Sigma-70 region 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000882 517.0
BYD3_k127_1498871_20 helix_turn_helix multiple antibiotic resistance protein - - - 0.000002733 55.0
BYD3_k127_1498871_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 411.0
BYD3_k127_1498871_4 histidine kinase HAMP region domain protein K05962 - 2.7.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 417.0
BYD3_k127_1498871_5 response regulator K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 356.0
BYD3_k127_1498871_6 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000177 292.0
BYD3_k127_1498871_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000341 267.0
BYD3_k127_1498871_8 alpha beta K07100 - - 0.0000000000000000000000000000000000000000000000000000000001972 225.0
BYD3_k127_1498871_9 Cytochrome c mono- and diheme variants - - - 0.00000000000000000000000000000000000000000000000000000005114 199.0
BYD3_k127_1502570_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 5.995e-285 889.0
BYD3_k127_1502570_1 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 1.686e-275 864.0
BYD3_k127_1502570_10 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004675 325.0
BYD3_k127_1502570_11 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007877 275.0
BYD3_k127_1502570_12 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009763 252.0
BYD3_k127_1502570_13 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000001881 180.0
BYD3_k127_1502570_14 Helix-turn-helix domain protein - - - 0.00000000000000000000000000000000000000000000002653 184.0
BYD3_k127_1502570_15 L-carnitine dehydratase bile acid-inducible protein F K18289 - 2.8.3.22 0.000000000000000000000000000000000000000002264 159.0
BYD3_k127_1502570_16 Type IV pilus biogenesis stability protein PilW - - - 0.00000000000000000000000000000001459 138.0
BYD3_k127_1502570_17 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.00000000000000000000653 94.0
BYD3_k127_1502570_18 Major Facilitator Superfamily - - - 0.000000003329 68.0
BYD3_k127_1502570_19 Protein of unknown function (DUF1223) - - - 0.000000004713 68.0
BYD3_k127_1502570_2 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006137 576.0
BYD3_k127_1502570_20 Protein of unknown function (DUF2799) - - - 0.0000001487 61.0
BYD3_k127_1502570_21 FAD binding domain - - - 0.0000002257 62.0
BYD3_k127_1502570_22 Protein of unknown function (DUF2799) - - - 0.00001132 51.0
BYD3_k127_1502570_24 DNA-sulfur modification-associated - - - 0.0006922 52.0
BYD3_k127_1502570_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 548.0
BYD3_k127_1502570_4 response regulator K07715 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 525.0
BYD3_k127_1502570_5 Protein of unknown function (DUF2817) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008781 429.0
BYD3_k127_1502570_6 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 391.0
BYD3_k127_1502570_7 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 378.0
BYD3_k127_1502570_8 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 383.0
BYD3_k127_1502570_9 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 348.0
BYD3_k127_1540198_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 4.595e-307 948.0
BYD3_k127_1540198_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 601.0
BYD3_k127_1540198_10 DNA polymerase III chi subunit, HolC - - - 0.00000000000000000000000000000000002495 139.0
BYD3_k127_1540198_11 RDD family - - - 0.00000000000000000000000005787 111.0
BYD3_k127_1540198_12 Protein of unknown function (DUF3106) - - - 0.000000000000000000000003277 108.0
BYD3_k127_1540198_13 Protein of unknown function (DUF3619) - - - 0.0000000000001171 78.0
BYD3_k127_1540198_14 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0000287,GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006417,GO:0006418,GO:0006438,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0034248,GO:0034250,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045903,GO:0046483,GO:0046872,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0052689,GO:0060255,GO:0061475,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:2000112 6.1.1.9 0.0000000000002624 70.0
BYD3_k127_1540198_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 545.0
BYD3_k127_1540198_3 Permease YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007889 398.0
BYD3_k127_1540198_4 Permease, YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009982 391.0
BYD3_k127_1540198_5 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008066 320.0
BYD3_k127_1540198_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 302.0
BYD3_k127_1540198_7 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005955 254.0
BYD3_k127_1540198_8 Acetolactate synthase small K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000003838 256.0
BYD3_k127_1540198_9 COG1593 TRAP-type C4-dicarboxylate transport system large permease component K11690 - - 0.0000000000000000000000000000000000000000007456 166.0
BYD3_k127_1551631_0 CoA binding domain K09181 - - 4.984e-238 758.0
BYD3_k127_1551631_1 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000004426 163.0
BYD3_k127_1551631_2 histidine kinase A domain protein - - - 0.00000000000000000000008527 108.0
BYD3_k127_1551631_3 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis - - - 0.000000000000000000006255 102.0
BYD3_k127_1551631_4 ABC1 family - - - 0.00000000001749 73.0
BYD3_k127_1578927_0 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032 - - 6.377e-242 766.0
BYD3_k127_1578927_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 4.939e-236 751.0
BYD3_k127_1578927_10 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000004674 82.0
BYD3_k127_1578927_2 Serine aminopeptidase, S33 - - - 9.741e-198 626.0
BYD3_k127_1578927_3 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007072 591.0
BYD3_k127_1578927_4 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007276 390.0
BYD3_k127_1578927_5 protein conserved in bacteria K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 360.0
BYD3_k127_1578927_6 Glycosyltransferase family 28 C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 316.0
BYD3_k127_1578927_7 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003205 250.0
BYD3_k127_1578927_8 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000000006994 180.0
BYD3_k127_1578927_9 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000005593 179.0
BYD3_k127_1591747_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 GO:0000287,GO:0003674,GO:0003824,GO:0004738,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0019842,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363,GO:1901681 1.2.4.1 0.0 1110.0
BYD3_k127_1591747_1 Glutaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 597.0
BYD3_k127_1591747_2 PFAM EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000003257 205.0
BYD3_k127_1591747_3 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000000006487 119.0
BYD3_k127_1591747_4 KR domain - - - 0.000000000000000001822 85.0
BYD3_k127_1633247_0 Domain of Unknown Function (DUF748) - - - 3.774e-238 783.0
BYD3_k127_1633247_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002931 312.0
BYD3_k127_1633247_2 PFAM DoxX family protein K15977 - - 0.000000001448 60.0
BYD3_k127_1633247_3 Domain of unknown function (DU1801) - - - 0.0005064 46.0
BYD3_k127_164338_0 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000447 279.0
BYD3_k127_164338_1 Saccharopine dehydrogenase C-terminal domain - - - 0.0000000000000000000000000000000003381 136.0
BYD3_k127_1647658_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 602.0
BYD3_k127_1647658_1 Secretin and TonB N terminus short domain K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009208 411.0
BYD3_k127_1647658_2 Type II secretion system (T2SS), protein F K02455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 361.0
BYD3_k127_1647658_3 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000004578 174.0
BYD3_k127_1647658_4 - - - - 0.00000000000000000000000000000000006035 144.0
BYD3_k127_1647658_5 - - - - 0.000000000000000002612 91.0
BYD3_k127_1647658_6 carbon utilization - - - 0.0000000000008553 80.0
BYD3_k127_1647658_7 - - - - 0.0000000002551 67.0
BYD3_k127_1667_0 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 344.0
BYD3_k127_1667_1 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001079 284.0
BYD3_k127_1693625_0 FAD dependent oxidoreductase - - - 2.756e-227 720.0
BYD3_k127_1693625_1 belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 3.614e-224 706.0
BYD3_k127_1693625_10 - - - - 0.0000000000000000000000000000000000000004298 159.0
BYD3_k127_1693625_2 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 416.0
BYD3_k127_1693625_3 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 411.0
BYD3_k127_1693625_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 366.0
BYD3_k127_1693625_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 366.0
BYD3_k127_1693625_6 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000396 362.0
BYD3_k127_1693625_7 Belongs to the GcvT family K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 373.0
BYD3_k127_1693625_8 Short-chain dehydrogenase reductase sdr K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 331.0
BYD3_k127_1693625_9 synthase K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000004294 266.0
BYD3_k127_1695927_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 3.796e-195 617.0
BYD3_k127_1695927_1 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004293 531.0
BYD3_k127_1695927_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0000226,GO:0001817,GO:0001819,GO:0001906,GO:0001907,GO:0002376,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004365,GO:0004857,GO:0004866,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005811,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006417,GO:0006464,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007017,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009607,GO:0009620,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009987,GO:0010033,GO:0010466,GO:0010468,GO:0010506,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010941,GO:0010942,GO:0010951,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016241,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016769,GO:0016903,GO:0017014,GO:0017144,GO:0017148,GO:0018119,GO:0018130,GO:0018193,GO:0018198,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019730,GO:0019752,GO:0019828,GO:0019904,GO:0030162,GO:0030234,GO:0030414,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031341,GO:0031343,GO:0031640,GO:0031647,GO:0031965,GO:0031967,GO:0031975,GO:0032268,GO:0032269,GO:0032787,GO:0032879,GO:0032880,GO:0032991,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035605,GO:0035606,GO:0035821,GO:0036094,GO:0036211,GO:0042221,GO:0042802,GO:0042866,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043436,GO:0043891,GO:0043900,GO:0043902,GO:0043903,GO:0044003,GO:0044004,GO:0044068,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044364,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044531,GO:0044532,GO:0044533,GO:0045087,GO:0045861,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050662,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050832,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051287,GO:0051336,GO:0051346,GO:0051402,GO:0051701,GO:0051702,GO:0051704,GO:0051707,GO:0051709,GO:0051712,GO:0051716,GO:0051817,GO:0051818,GO:0051851,GO:0051852,GO:0051873,GO:0051883,GO:0052040,GO:0052042,GO:0052248,GO:0052330,GO:0052433,GO:0052501,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061134,GO:0061135,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0061844,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070887,GO:0070997,GO:0071310,GO:0071345,GO:0071346,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090407,GO:0097159,GO:0097452,GO:0097718,GO:0098542,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:1990904,GO:2000112,GO:2000113 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 514.0
BYD3_k127_1695927_3 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 494.0
BYD3_k127_1695927_4 Secondary thiamine-phosphate synthase enzyme - - - 0.00000000000000000000000000000000000000000000000000002793 190.0
BYD3_k127_1695927_5 PFAM MaoC like domain - - - 0.0000000000000000000000009756 115.0
BYD3_k127_1706240_0 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 293.0
BYD3_k127_1706240_1 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001066 274.0
BYD3_k127_1716167_0 COG1538 Outer membrane protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 424.0
BYD3_k127_1716167_1 3-Deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004066 384.0
BYD3_k127_1716167_2 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 319.0
BYD3_k127_1716167_3 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 300.0
BYD3_k127_1716167_4 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003541 278.0
BYD3_k127_1716167_5 Rhodanese Homology Domain - - - 0.0000000000000000001446 92.0
BYD3_k127_1723972_0 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 7.349e-239 759.0
BYD3_k127_1723972_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 603.0
BYD3_k127_1723972_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001006 254.0
BYD3_k127_1733135_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 445.0
BYD3_k127_1733135_1 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002907 384.0
BYD3_k127_1733135_2 AMP-binding enzyme K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000002439 204.0
BYD3_k127_1758521_0 mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 334.0
BYD3_k127_1758521_1 POTRA domain TamA domain 1 - - - 0.00000000000000000000000000000000000000000000009938 183.0
BYD3_k127_1762222_0 PFAM Amylo-alpha-16-glucosidase - - - 2.125e-197 627.0
BYD3_k127_1762222_1 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000007114 138.0
BYD3_k127_1762222_2 Immunity protein 32 - - - 0.000001435 54.0
BYD3_k127_1766866_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 8.641e-244 764.0
BYD3_k127_1766866_1 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000006284 251.0
BYD3_k127_1766866_2 [2Fe-2S] binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000001515 228.0
BYD3_k127_1811147_0 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006463 418.0
BYD3_k127_1811147_1 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008342 338.0
BYD3_k127_1811147_2 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000777 194.0
BYD3_k127_1811147_3 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.00000001442 67.0
BYD3_k127_1812938_0 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 2.242e-302 947.0
BYD3_k127_1812938_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576 - - 2.208e-202 636.0
BYD3_k127_1812938_10 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003354 263.0
BYD3_k127_1812938_11 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000001193 244.0
BYD3_k127_1812938_12 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001112 241.0
BYD3_k127_1812938_13 LysR substrate binding domain K18900 - - 0.0000000000000000000000000000000000000000000000000000001959 212.0
BYD3_k127_1812938_14 NnrU protein - - - 0.000000000000000000000000000000000000000000000000000000388 199.0
BYD3_k127_1812938_15 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000005321 201.0
BYD3_k127_1812938_16 ANTAR K07183 - - 0.0000000000000000000000000000000000000000000000000113 186.0
BYD3_k127_1812938_17 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362 - 1.7.1.15 0.0000000000000000000000000000000000000000000000005972 192.0
BYD3_k127_1812938_18 Thioesterase - - - 0.000000000000000000000000000000000001147 142.0
BYD3_k127_1812938_19 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000000002562 138.0
BYD3_k127_1812938_2 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005708 533.0
BYD3_k127_1812938_20 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000001439 136.0
BYD3_k127_1812938_21 NMT1-like family K07080 - - 0.000000000008711 66.0
BYD3_k127_1812938_3 Nitrate ABC transporter inner membrane subunit K15577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 391.0
BYD3_k127_1812938_4 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 391.0
BYD3_k127_1812938_5 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 380.0
BYD3_k127_1812938_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 331.0
BYD3_k127_1812938_7 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005508 295.0
BYD3_k127_1812938_8 Tetrapyrrole (Corrin/Porphyrin) Methylases K02303 - 2.1.1.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003552 270.0
BYD3_k127_1812938_9 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000003257 272.0
BYD3_k127_1823349_0 Acetyl-coenzyme A synthetase N-terminus K01908 - 6.2.1.17 7.01e-289 897.0
BYD3_k127_1823349_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 1.406e-253 817.0
BYD3_k127_1823349_10 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000001755 213.0
BYD3_k127_1823349_11 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000001001 189.0
BYD3_k127_1823349_12 Gentisate 1,2-dioxygenase K00450 - 1.13.11.4 0.00000000000000000000000000000000000000000000003672 183.0
BYD3_k127_1823349_13 Haem-degrading K11477 - - 0.00000000000000000000000000000000003437 141.0
BYD3_k127_1823349_2 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 571.0
BYD3_k127_1823349_3 FAD binding domain K00480 - 1.14.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003826 530.0
BYD3_k127_1823349_4 amino acid K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 484.0
BYD3_k127_1823349_5 PFAM AFG1-family ATPase K06916 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007755 438.0
BYD3_k127_1823349_6 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 411.0
BYD3_k127_1823349_7 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003774 288.0
BYD3_k127_1823349_8 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000002337 239.0
BYD3_k127_1823349_9 aminopeptidase activity K18028 - 1.13.11.9 0.0000000000000000000000000000000000000000000000000000000000000000003549 242.0
BYD3_k127_1833046_0 PFAM ABC transporter related K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 428.0
BYD3_k127_1833046_1 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005853 385.0
BYD3_k127_1833046_2 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000004886 214.0
BYD3_k127_1833046_3 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000001554 224.0
BYD3_k127_1833046_4 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000002418 198.0
BYD3_k127_1833046_5 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000008874 138.0
BYD3_k127_1833046_6 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000002955 137.0
BYD3_k127_1846616_0 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000000000000000007004 213.0
BYD3_k127_1846616_1 Methyltransferase - - - 0.00000000000000000000000000000000000000000000004111 179.0
BYD3_k127_1846616_2 Acetyltransferase (GNAT) domain - - - 0.0000000000002015 70.0
BYD3_k127_1846616_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000008059 70.0
BYD3_k127_1846616_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000004211 70.0
BYD3_k127_1966354_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.456e-240 751.0
BYD3_k127_1966354_1 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001302 280.0
BYD3_k127_1966354_2 Aminoacyl-tRNA editing domain - - - 0.00000000000000000000000000000000000000002531 157.0
BYD3_k127_1966354_3 Predicted membrane protein (DUF2069) - - - 0.0000000000000000000000006505 111.0
BYD3_k127_1966354_4 FK506 binding K09575,K09577 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005509,GO:0005527,GO:0005528,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006457,GO:0006464,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0061077,GO:0071704,GO:0097159,GO:0140096,GO:1901363,GO:1901564 5.2.1.8 0.0000001999 61.0
BYD3_k127_19857_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 4.681e-204 650.0
BYD3_k127_19857_1 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005823 389.0
BYD3_k127_19857_2 Phosphotransferase system, mannose fructose-specific component IIA K02821 - 2.7.1.194 0.000000000000000000000000000000000003986 141.0
BYD3_k127_19857_3 phosphocarrier, HPr family K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000008519 126.0
BYD3_k127_19857_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000008257 110.0
BYD3_k127_2007715_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 6.133e-318 981.0
BYD3_k127_2007715_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 463.0
BYD3_k127_2007715_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 432.0
BYD3_k127_2007715_3 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 366.0
BYD3_k127_2007715_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000443 259.0
BYD3_k127_2007715_5 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000592 188.0
BYD3_k127_2007715_6 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000009194 176.0
BYD3_k127_2007715_7 TIGRFAM PAS sensor protein - - - 0.00000000000000000000000000000001051 139.0
BYD3_k127_2007715_8 histidine kinase A domain protein - - - 0.0000000000000000000201 97.0
BYD3_k127_2007715_9 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000003234 83.0
BYD3_k127_2008513_0 Protein of unknown function (DUF3141) - - - 7.62e-293 917.0
BYD3_k127_2008513_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 527.0
BYD3_k127_2008513_2 phosphate K00625 - 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 434.0
BYD3_k127_2008513_3 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.00000000013 63.0
BYD3_k127_2058945_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 9.721e-264 831.0
BYD3_k127_2058945_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 549.0
BYD3_k127_2058945_10 YqeY-like protein K09117 - - 0.00000000000000000000000000000000000000000000001141 176.0
BYD3_k127_2058945_11 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.0000000000000000000000000000000000000002402 155.0
BYD3_k127_2058945_12 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000000000000000000000694 122.0
BYD3_k127_2058945_13 Gram-negative-bacterium-type cell outer membrane assembly K21572 - - 0.000005387 54.0
BYD3_k127_2058945_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 432.0
BYD3_k127_2058945_3 Tyrosine recombinase xerD K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 361.0
BYD3_k127_2058945_4 Belongs to the LDH2 MDH2 oxidoreductase family K13609,K16844 - 1.1.1.338,1.5.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 359.0
BYD3_k127_2058945_5 dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000005587 263.0
BYD3_k127_2058945_6 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000001947 226.0
BYD3_k127_2058945_7 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000003944 209.0
BYD3_k127_2058945_8 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000004698 214.0
BYD3_k127_2058945_9 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily - - - 0.00000000000000000000000000000000000000000000000000000001207 209.0
BYD3_k127_2075168_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 4.307e-273 856.0
BYD3_k127_2075168_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 599.0
BYD3_k127_2075168_10 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000000174 142.0
BYD3_k127_2075168_11 protein conserved in bacteria K09937 - - 0.000000000000000008043 84.0
BYD3_k127_2075168_12 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000001212 59.0
BYD3_k127_2075168_2 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 479.0
BYD3_k127_2075168_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 429.0
BYD3_k127_2075168_4 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 386.0
BYD3_k127_2075168_5 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 387.0
BYD3_k127_2075168_6 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 300.0
BYD3_k127_2075168_7 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009849 271.0
BYD3_k127_2075168_8 - - - - 0.0000000000000000000000000000000000000000000000001003 183.0
BYD3_k127_2075168_9 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000169 154.0
BYD3_k127_2096960_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 2.392e-200 633.0
BYD3_k127_2096960_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 449.0
BYD3_k127_2096960_2 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 315.0
BYD3_k127_2096960_3 Pyrimidine 5''-nucleotidase K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000000008263 249.0
BYD3_k127_2096960_4 Bacterial regulatory proteins, tetR family K05501 - - 0.000000000000000000000000000000000000000000000000000000000000007847 220.0
BYD3_k127_2096960_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000005213 166.0
BYD3_k127_2096960_6 The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.80,2.8.1.11 0.0000009963 51.0
BYD3_k127_2131222_0 Haloacid dehalogenase, type II K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000836 368.0
BYD3_k127_2131222_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003576 258.0
BYD3_k127_2131222_2 - - - - 0.00000000000000000001913 95.0
BYD3_k127_2211843_0 Belongs to the enoyl-CoA hydratase isomerase family K07516 - 1.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 590.0
BYD3_k127_2211843_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 552.0
BYD3_k127_2211843_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 543.0
BYD3_k127_2211843_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 545.0
BYD3_k127_2211843_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 431.0
BYD3_k127_2211843_5 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 366.0
BYD3_k127_2244738_0 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 3.574e-224 706.0
BYD3_k127_2244738_1 dehydratase K08678 - 4.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006158 528.0
BYD3_k127_2244738_10 Cytochrome c K17223 - - 0.0000000000000000000000000000000000000000000000003459 191.0
BYD3_k127_2244738_11 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.000000000000000000000000000000000000000000000001352 180.0
BYD3_k127_2244738_12 Sulfur oxidation protein SoxY K17226 - - 0.000000000000000000000000000000000000007748 153.0
BYD3_k127_2244738_13 Sulfurtransferase TusA K04085 - - 0.00000000000000000000000000000002518 127.0
BYD3_k127_2244738_14 Hexosyltransferase - - - 0.0000000000000000003813 100.0
BYD3_k127_2244738_15 Sulphur oxidation protein SoxZ K17227 - - 0.0000000000000000004564 90.0
BYD3_k127_2244738_16 deoxyhypusine monooxygenase activity K01387 - 3.4.24.3 0.000000000000004815 88.0
BYD3_k127_2244738_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 478.0
BYD3_k127_2244738_3 peptidase m48, ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 449.0
BYD3_k127_2244738_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 422.0
BYD3_k127_2244738_5 abc transporter K02003,K05685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008094 311.0
BYD3_k127_2244738_6 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000852 290.0
BYD3_k127_2244738_7 Chromate resistance exported protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001517 240.0
BYD3_k127_2244738_8 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000006675 206.0
BYD3_k127_2244738_9 Haem-degrading - - - 0.00000000000000000000000000000000000000000000000003374 187.0
BYD3_k127_2275785_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1121.0
BYD3_k127_2275785_1 Required for chromosome condensation and partitioning K03529 - - 5e-323 1026.0
BYD3_k127_2275785_10 PFAM DNA primase small subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008408 568.0
BYD3_k127_2275785_11 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 529.0
BYD3_k127_2275785_12 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 488.0
BYD3_k127_2275785_13 PFAM aminotransferase class I and II K14267 - 2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 475.0
BYD3_k127_2275785_14 Type II/IV secretion system protein K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005923 464.0
BYD3_k127_2275785_15 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 459.0
BYD3_k127_2275785_16 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000047 430.0
BYD3_k127_2275785_17 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 435.0
BYD3_k127_2275785_18 DNA ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009401 426.0
BYD3_k127_2275785_19 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008664 419.0
BYD3_k127_2275785_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 2.205e-291 912.0
BYD3_k127_2275785_20 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002801 421.0
BYD3_k127_2275785_21 Psort location Cytoplasmic, score 8.96 K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 405.0
BYD3_k127_2275785_22 Belongs to the transferase hexapeptide repeat family K00674 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008666,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016749,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 400.0
BYD3_k127_2275785_23 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003436 397.0
BYD3_k127_2275785_24 Polyphosphate kinase 2 (PPK2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 399.0
BYD3_k127_2275785_25 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 394.0
BYD3_k127_2275785_26 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 374.0
BYD3_k127_2275785_27 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008673 379.0
BYD3_k127_2275785_28 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008983 383.0
BYD3_k127_2275785_29 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 366.0
BYD3_k127_2275785_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 1.908e-289 924.0
BYD3_k127_2275785_30 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 352.0
BYD3_k127_2275785_31 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 352.0
BYD3_k127_2275785_32 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008043 349.0
BYD3_k127_2275785_33 Methyl-transferase K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008215 353.0
BYD3_k127_2275785_34 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 352.0
BYD3_k127_2275785_35 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008209 314.0
BYD3_k127_2275785_36 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000205 286.0
BYD3_k127_2275785_37 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001387 257.0
BYD3_k127_2275785_38 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000002929 255.0
BYD3_k127_2275785_39 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000002496 232.0
BYD3_k127_2275785_4 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 4.951e-278 861.0
BYD3_k127_2275785_40 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000001311 246.0
BYD3_k127_2275785_41 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000001303 227.0
BYD3_k127_2275785_42 phosphoribosyltransferase K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000002124 219.0
BYD3_k127_2275785_43 DNA polymerase III, delta' K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000002662 225.0
BYD3_k127_2275785_44 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000003702 234.0
BYD3_k127_2275785_45 CYTH - - - 0.0000000000000000000000000000000000000000000000000000000002926 222.0
BYD3_k127_2275785_46 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000008768 208.0
BYD3_k127_2275785_47 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016651,GO:0016657,GO:0018130,GO:0019438,GO:0033739,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000009573 203.0
BYD3_k127_2275785_48 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000000000000000000000000000000000016 208.0
BYD3_k127_2275785_49 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000002144 191.0
BYD3_k127_2275785_5 Class II Aldolase and Adducin N-terminal domain - - - 2.393e-266 835.0
BYD3_k127_2275785_50 ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000000000000000000000000000000000000001913 187.0
BYD3_k127_2275785_51 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000000000000000000000000000000000000000000003136 193.0
BYD3_k127_2275785_52 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000000000000000000000000168 188.0
BYD3_k127_2275785_53 Aminomethyltransferase folate-binding domain K06980 - - 0.0000000000000000000000000000000000000000000000003986 184.0
BYD3_k127_2275785_54 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000134 179.0
BYD3_k127_2275785_55 Belongs to the skp family K06142 - - 0.000000000000000000000000000000000000000000000221 175.0
BYD3_k127_2275785_56 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.000000000000000000000000000000000000000001059 164.0
BYD3_k127_2275785_57 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.000000000000000000000000000000000000000007253 163.0
BYD3_k127_2275785_58 n-acetyltransferase - - - 0.0000000000000000000000000000000000000002011 156.0
BYD3_k127_2275785_59 Ring hydroxylating beta subunit K16303 - 1.14.12.25 0.0000000000000000000000000000000000000004165 158.0
BYD3_k127_2275785_6 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 6.057e-247 779.0
BYD3_k127_2275785_60 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000005751 153.0
BYD3_k127_2275785_61 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000000000000000000009744 128.0
BYD3_k127_2275785_62 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000002655 130.0
BYD3_k127_2275785_63 Protein of unknown function (DUF1178) - - - 0.00000000000000000000000000000004524 133.0
BYD3_k127_2275785_64 HlyD membrane-fusion protein of T1SS K02022 - - 0.0000000000000000000000006736 106.0
BYD3_k127_2275785_65 Putative peptidoglycan binding domain - - - 0.00000000000000000009281 95.0
BYD3_k127_2275785_67 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000002053 82.0
BYD3_k127_2275785_68 Domain of unknown function (DUF4936) - - - 0.00000000004256 66.0
BYD3_k127_2275785_69 Domain of unknown function (DUF4124) - - - 0.00000000191 70.0
BYD3_k127_2275785_7 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 3.916e-235 734.0
BYD3_k127_2275785_70 PilZ domain - - - 0.000002814 55.0
BYD3_k127_2275785_8 Ring hydroxylating alpha subunit (catalytic domain) K14748 - - 2.579e-214 671.0
BYD3_k127_2275785_9 Tripartite tricarboxylate transporter TctA family K07793 - - 1.073e-212 670.0
BYD3_k127_2279167_0 AMP-binding enzyme C-terminal domain K00666,K01897 - 6.2.1.3 1.454e-208 662.0
BYD3_k127_2279167_1 Phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 505.0
BYD3_k127_2279167_10 N-acetyltransferase K03823 - 2.3.1.183 0.0000000000000000000000000000000000008465 140.0
BYD3_k127_2279167_11 protein conserved in bacteria K09796 - - 0.000000000000000000000000000005724 125.0
BYD3_k127_2279167_12 helix_turn_helix isocitrate lyase regulation - - - 0.0000000000000001064 80.0
BYD3_k127_2279167_2 PFAM L-carnitine dehydratase bile acid-inducible protein F K01796 - 5.1.99.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 478.0
BYD3_k127_2279167_3 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 441.0
BYD3_k127_2279167_4 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781,K20023 - 4.2.1.156,4.2.1.42,5.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007751 432.0
BYD3_k127_2279167_5 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 384.0
BYD3_k127_2279167_6 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 334.0
BYD3_k127_2279167_7 phosphate transport regulator K07220 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005027 280.0
BYD3_k127_2279167_8 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008764 250.0
BYD3_k127_2279167_9 Mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000000000000000000002391 241.0
BYD3_k127_2291438_0 Bifunctional transglycosylase second domain K05365 - 2.4.1.129,3.4.16.4 4.021e-271 854.0
BYD3_k127_2291438_1 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 512.0
BYD3_k127_2291438_10 Periplasmic binding protein domain K01999 - - 0.0000000000000000000000000000000000000000001952 164.0
BYD3_k127_2291438_11 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.0000000000000000000000000000000000000001573 159.0
BYD3_k127_2291438_12 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.000000000000000000000000000000000000001263 152.0
BYD3_k127_2291438_13 Protein of unknown function (DUF3618) - - - 0.000000000000000000000000000000000000006567 161.0
BYD3_k127_2291438_14 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000007547 143.0
BYD3_k127_2291438_15 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000002263 144.0
BYD3_k127_2291438_16 Tetratricopeptide repeat - - - 0.0000000000000000000000000004355 122.0
BYD3_k127_2291438_17 - - - - 0.000001321 61.0
BYD3_k127_2291438_18 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00008272 52.0
BYD3_k127_2291438_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 457.0
BYD3_k127_2291438_3 Benzoate membrane transport protein K05782 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008702 411.0
BYD3_k127_2291438_4 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 325.0
BYD3_k127_2291438_5 Belongs to the UPF0502 family K09915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001458 281.0
BYD3_k127_2291438_6 PFAM MmgE PrpD family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002912 303.0
BYD3_k127_2291438_7 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001207 283.0
BYD3_k127_2291438_8 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000474 249.0
BYD3_k127_2291438_9 branched-chain amino acid ABC transporter ATP-binding protein K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000001903 243.0
BYD3_k127_2298403_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 5.841e-249 788.0
BYD3_k127_2298403_1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 1.44e-243 758.0
BYD3_k127_2298403_10 aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 467.0
BYD3_k127_2298403_11 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 396.0
BYD3_k127_2298403_12 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 357.0
BYD3_k127_2298403_13 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 340.0
BYD3_k127_2298403_14 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 323.0
BYD3_k127_2298403_15 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 293.0
BYD3_k127_2298403_16 ROK family K00845,K00886 - 2.7.1.2,2.7.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 290.0
BYD3_k127_2298403_17 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001052 292.0
BYD3_k127_2298403_18 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002436 274.0
BYD3_k127_2298403_19 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000001419 202.0
BYD3_k127_2298403_2 DNA ligase K01971 - 6.5.1.1 6.743e-228 731.0
BYD3_k127_2298403_20 Protein of unknown function (DUF421) - - - 0.00000000000000000000000000000000000000000000008721 173.0
BYD3_k127_2298403_21 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000002746 142.0
BYD3_k127_2298403_22 Protein of unknown function (DUF805) - - - 0.0000000000000000000000000000000005669 138.0
BYD3_k127_2298403_23 - - - - 0.00000000000000000000000000000003773 132.0
BYD3_k127_2298403_24 Sterol carrier protein - - - 0.00000000000000000000000008257 110.0
BYD3_k127_2298403_25 psiF repeat - - - 0.0000000000000000000000008727 108.0
BYD3_k127_2298403_26 Histidine kinase - - - 0.000000000000000000000041 105.0
BYD3_k127_2298403_27 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.00000000000000000000007225 104.0
BYD3_k127_2298403_29 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.000000000000000000189 99.0
BYD3_k127_2298403_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 5.566e-215 674.0
BYD3_k127_2298403_30 - - - - 0.0000000000000000006668 95.0
BYD3_k127_2298403_31 - - - - 0.0000000000000002072 83.0
BYD3_k127_2298403_32 Protein of unknown function (DUF3606) - - - 0.0000000001099 66.0
BYD3_k127_2298403_33 PFAM Hemerythrin HHE cation binding domain protein - - - 0.0000000001396 70.0
BYD3_k127_2298403_34 ribosome binding - - - 0.000001127 59.0
BYD3_k127_2298403_35 Nacht domain - - - 0.000003768 55.0
BYD3_k127_2298403_4 His Kinase A (phosphoacceptor) domain - - - 6.73e-201 659.0
BYD3_k127_2298403_5 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009333 612.0
BYD3_k127_2298403_6 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 581.0
BYD3_k127_2298403_7 CoA-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007536 574.0
BYD3_k127_2298403_8 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 513.0
BYD3_k127_2298403_9 PFAM MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 506.0
BYD3_k127_2307295_0 Respiratory nitrate reductase alpha N-terminal K00370 - 1.7.5.1 0.0 1573.0
BYD3_k127_2307295_1 Respiratory nitrate reductase beta C-terminal K00371,K17051 - 1.7.5.1 3.198e-285 889.0
BYD3_k127_2307295_10 Rubrerythrin - - - 0.0000000000000000014 96.0
BYD3_k127_2307295_11 bacterial OsmY and nodulation domain K04065 - - 0.000000000000001904 81.0
BYD3_k127_2307295_12 Nitrate reductase K02571 - - 0.0000000001991 64.0
BYD3_k127_2307295_13 - - - - 0.00006473 53.0
BYD3_k127_2307295_14 DGC domain - - - 0.0001189 50.0
BYD3_k127_2307295_2 Ethylbenzene dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000894 521.0
BYD3_k127_2307295_3 Nitrate reductase K00374 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000605 295.0
BYD3_k127_2307295_4 Nitrate reductase, delta subunit K00373 - - 0.0000000000000000000000000000000000000000000002175 178.0
BYD3_k127_2307295_5 SMART CBS domain containing protein K07182 - - 0.000000000000000000000000000000000000000000002971 175.0
BYD3_k127_2307295_6 - - - - 0.0000000000000000000000000000000000000003665 156.0
BYD3_k127_2307295_7 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000714 153.0
BYD3_k127_2307295_8 universal stress protein - - - 0.00000000000000000000000000000007571 131.0
BYD3_k127_2307295_9 Hemerythrin HHE cation binding domain - - - 0.00000000000000000003846 96.0
BYD3_k127_2309917_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 413.0
BYD3_k127_2309917_1 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 326.0
BYD3_k127_2309917_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K03793 - 1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006217 275.0
BYD3_k127_2309917_3 Protein of unknown function (DUF3750) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006139 247.0
BYD3_k127_2309917_4 PFAM small multidrug resistance protein K11741 - - 0.000000000000000000000000000000000001777 140.0
BYD3_k127_2309917_5 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000002284 102.0
BYD3_k127_2343805_0 PFAM Cytochrome c, class I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 593.0
BYD3_k127_2343805_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000005613 229.0
BYD3_k127_2343805_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000007918 122.0
BYD3_k127_2343805_3 - - - - 0.00000000000000000000001528 104.0
BYD3_k127_2343805_4 Histidine kinase - - - 0.0000000000000000000001787 103.0
BYD3_k127_2343805_5 protein conserved in bacteria - - - 0.0000000000000000000003416 99.0
BYD3_k127_2343805_6 - - - - 0.00000000000001464 76.0
BYD3_k127_2343805_7 GGDEF domain - - - 0.00000003319 61.0
BYD3_k127_2377605_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 539.0
BYD3_k127_2377605_1 AIR synthase related protein domain protein K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006916 462.0
BYD3_k127_2377605_2 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009553 297.0
BYD3_k127_2377605_3 TIGRFAM DnaA regulatory inactivator Hda K10763 - - 0.00000000000000000000000000000000000000000000000000369 188.0
BYD3_k127_2377605_4 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000001272 173.0
BYD3_k127_2383293_0 (Lipo)protein K07287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 386.0
BYD3_k127_2383293_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 352.0
BYD3_k127_2383293_2 PFAM Cupin 4 family protein K18850 - 1.14.11.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 294.0
BYD3_k127_2383293_3 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002595 283.0
BYD3_k127_2383293_4 Bacterial protein of unknown function (DUF899) K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000006253 213.0
BYD3_k127_2383293_5 pathogenesis - - - 0.000000000000000000000000000000000000000003499 168.0
BYD3_k127_2383293_6 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000000000002112 145.0
BYD3_k127_2383293_7 Domain of unknown function (DUF1835) - - - 0.00000000000000000000000000009021 124.0
BYD3_k127_2383293_8 - - - - 0.0000000000000000001505 100.0
BYD3_k127_2494176_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 566.0
BYD3_k127_2494176_1 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007689 489.0
BYD3_k127_2494176_2 Amidohydrolase K01686 - 4.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000522 465.0
BYD3_k127_2494176_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003904 422.0
BYD3_k127_2494176_4 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001247 274.0
BYD3_k127_2494176_5 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008151 254.0
BYD3_k127_2494176_6 CBS domain - - - 0.0000000000000000000000000000000000000000000001597 171.0
BYD3_k127_2494176_7 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000000174 142.0
BYD3_k127_254200_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 1.14e-322 996.0
BYD3_k127_254200_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 3.244e-281 889.0
BYD3_k127_254200_10 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000000000000006241 175.0
BYD3_k127_254200_11 Methyltransferase - - - 0.000000000000000000000000000000000000001967 157.0
BYD3_k127_254200_12 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000007539 88.0
BYD3_k127_254200_13 dehydrogenase - - - 0.000001696 50.0
BYD3_k127_254200_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 498.0
BYD3_k127_254200_3 protein conserved in bacteria K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 482.0
BYD3_k127_254200_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009894 361.0
BYD3_k127_254200_5 4,5-dihydroxyphthalate decarboxylase K04102 - 4.1.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008068 353.0
BYD3_k127_254200_6 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000066 250.0
BYD3_k127_254200_7 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006853 257.0
BYD3_k127_254200_8 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000000001895 192.0
BYD3_k127_254200_9 PFAM regulatory protein, MerR - - - 0.0000000000000000000000000000000000000000000000000001034 188.0
BYD3_k127_2571510_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 409.0
BYD3_k127_2571510_1 Universal stress protein - - - 0.00000000000000000000000000000000002015 139.0
BYD3_k127_2571510_2 Universal stress protein - - - 0.0000000000000000000000000000000003443 136.0
BYD3_k127_2571510_3 Universal stress protein family - - - 0.0000000000000000002115 96.0
BYD3_k127_2621281_0 asparagine K01953 - 6.3.5.4 1.48e-241 767.0
BYD3_k127_2621281_1 Male sterility protein K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 428.0
BYD3_k127_2621281_2 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000809 441.0
BYD3_k127_2621281_3 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005836 348.0
BYD3_k127_2621281_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004132 276.0
BYD3_k127_2621281_5 - - - - 0.00000000000000000000000000000000000000000000000000000003871 216.0
BYD3_k127_2621281_6 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000006924 207.0
BYD3_k127_2621281_7 Glycosyltransferase, group 2 family protein - - - 0.00000000000000006323 81.0
BYD3_k127_2624301_0 Domain of unknown function (DUF3400) - - - 0.0 1696.0
BYD3_k127_2624301_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1088.0
BYD3_k127_2624301_10 Protein of unknown function (DUF2782) - - - 0.0000000000000000004134 90.0
BYD3_k127_2624301_11 Protein of unknown function (DUF4197) - - - 0.000000000000004206 75.0
BYD3_k127_2624301_2 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 3.232e-199 630.0
BYD3_k127_2624301_3 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 381.0
BYD3_k127_2624301_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 335.0
BYD3_k127_2624301_5 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008122 328.0
BYD3_k127_2624301_6 - - - - 0.0000000000000000000000000000000000000000000000000000152 203.0
BYD3_k127_2624301_7 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000000004575 186.0
BYD3_k127_2624301_8 import inner membrane translocase subunit Tim44 - - - 0.00000000000000000000000000000000000000000000001487 183.0
BYD3_k127_2624301_9 PFAM Sterol-binding domain protein K03690 - - 0.0000000000000000000000000000000276 133.0
BYD3_k127_2630813_0 ABC transporter transmembrane region K18893 - - 4.532e-232 732.0
BYD3_k127_2630813_1 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 451.0
BYD3_k127_2630813_10 Cation transport regulator - - - 0.000000000504 67.0
BYD3_k127_2630813_2 chromosome segregation K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 391.0
BYD3_k127_2630813_3 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 344.0
BYD3_k127_2630813_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 302.0
BYD3_k127_2630813_5 Belongs to the HpcH HpaI aldolase family K00979,K02510 - 2.7.7.38,4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000452 285.0
BYD3_k127_2630813_6 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000005972 173.0
BYD3_k127_2630813_7 Glutathione S-transferase K00799,K11209 - 2.5.1.18 0.0000000000000000000000000000000000007423 150.0
BYD3_k127_2630813_8 Domain of unknown function (DUF1932) K00020 - 1.1.1.31 0.00000000000000000000000000000000004669 145.0
BYD3_k127_2630813_9 - - - - 0.0000000000000000000000000000000003047 145.0
BYD3_k127_2630944_0 Protein of unknown function (DUF993) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 538.0
BYD3_k127_2630944_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004468 506.0
BYD3_k127_2630944_2 Trap-type c4-dicarboxylate transport system, small permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005464 241.0
BYD3_k127_2630944_3 taurine catabolism dioxygenase K03119 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000002894 209.0
BYD3_k127_2630944_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000355 194.0
BYD3_k127_2630944_5 TIGRFAM TRAP transporter, DctM subunit - - - 0.00000000000000000000000000000000000000000000000000008305 189.0
BYD3_k127_2640811_0 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 342.0
BYD3_k127_2640811_1 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 290.0
BYD3_k127_2640811_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003728 271.0
BYD3_k127_2648525_0 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K03520 - 1.2.5.3 0.0 1147.0
BYD3_k127_2648525_1 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 414.0
BYD3_k127_2648525_2 histidine kinase HAMP region domain protein K07649 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007579 351.0
BYD3_k127_2648525_3 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 321.0
BYD3_k127_2648525_4 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007673 265.0
BYD3_k127_2648525_5 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000001941 244.0
BYD3_k127_2648525_6 carbon monoxide dehydrogenase K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000001045 233.0
BYD3_k127_2648525_7 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000000000000000000008611 212.0
BYD3_k127_2648525_8 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000002133 170.0
BYD3_k127_2648525_9 Molybdopterin-guanine dinucleotide biosynthesis protein MobA K07141 - 2.7.7.76 0.0000000000000000000000000000000000000003698 167.0
BYD3_k127_2655532_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 2.746e-287 895.0
BYD3_k127_2655532_1 PFAM FAD linked oxidase domain protein K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 2.633e-227 712.0
BYD3_k127_2655532_2 COG1132 ABC-type multidrug transport system, ATPase and permease components K06147 - - 2.794e-200 640.0
BYD3_k127_2655532_3 glycolate oxidase iron-sulfur subunit K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 518.0
BYD3_k127_2655532_4 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009344 521.0
BYD3_k127_2655532_5 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 440.0
BYD3_k127_2655532_6 FAD binding domain K11472 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000034 420.0
BYD3_k127_2655532_7 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000000000005963 113.0
BYD3_k127_2656502_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 1.291e-316 979.0
BYD3_k127_2656502_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 458.0
BYD3_k127_2656502_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008956 326.0
BYD3_k127_2656502_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 301.0
BYD3_k127_2656502_4 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001851 264.0
BYD3_k127_2656502_5 - - - - 0.000000000000000000000000000000000000000000000000532 177.0
BYD3_k127_268498_0 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 561.0
BYD3_k127_268498_1 Acyl-CoA dehydrogenase, C-terminal domain K06446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 557.0
BYD3_k127_268498_2 TIGRFAM HAD-superfamily subfamily IB hydrolase, TIGR01490 - - - 0.000000000000000000000000000000000000000000000000000000000000002525 227.0
BYD3_k127_268498_3 MaoC like domain K18290 - 4.2.1.56 0.00000000000000000000000000000000000000000000000000000000000001121 227.0
BYD3_k127_268498_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000003438 193.0
BYD3_k127_268498_5 C4-dicarboxylate ABC transporter permease - - - 0.000000000000000000000000000000000000007905 158.0
BYD3_k127_268498_6 transcriptional - - - 0.00000000000000000000000000000000000357 149.0
BYD3_k127_268498_7 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily K00830,K00839,K03430 GO:0003674,GO:0003824 2.6.1.112,2.6.1.37,2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000002864 83.0
BYD3_k127_268498_8 Bacterial extracellular solute-binding protein, family 7 K21395 - - 0.00000000001274 77.0
BYD3_k127_268498_9 Tripartite ATP-independent periplasmic transporters, DctQ component K11689 - - 0.000001617 57.0
BYD3_k127_2685374_0 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002253 265.0
BYD3_k127_2685374_1 Domain of unknown function DUF108 K06989 - 1.4.1.21 0.000000000000000000000000000000000000000000000000000000000000002983 228.0
BYD3_k127_2685374_2 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000003202 162.0
BYD3_k127_2725266_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008959 589.0
BYD3_k127_2725266_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000000000000000000000000000000000005376 213.0
BYD3_k127_2725266_2 Glutaredoxin-like domain (DUF836) - - - 0.0000000001631 65.0
BYD3_k127_2725266_3 negative regulator of sigma E activity K03598 - - 0.0000009963 51.0
BYD3_k127_2725675_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.134e-200 633.0
BYD3_k127_2725675_1 SPTR MCP methyltransferase, CheR-type with PAS PAC sensor K00575,K13924 - 2.1.1.80,3.1.1.61 7.266e-199 642.0
BYD3_k127_2725675_10 G-rich domain on putative tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000271 282.0
BYD3_k127_2725675_11 PFAM CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000002882 263.0
BYD3_k127_2725675_12 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000007474 241.0
BYD3_k127_2725675_13 Glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000001884 250.0
BYD3_k127_2725675_14 polysaccharide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000004842 240.0
BYD3_k127_2725675_15 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000001119 220.0
BYD3_k127_2725675_16 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000003803 226.0
BYD3_k127_2725675_17 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase - - - 0.000000000000000000000000000000000000000000000000000003234 204.0
BYD3_k127_2725675_18 SurA N-terminal domain - - - 0.00000000000000000000000000000000000000000000001149 185.0
BYD3_k127_2725675_19 O-Antigen ligase - - - 0.00000000000000000000000000000000000004061 160.0
BYD3_k127_2725675_2 UDP binding domain K02474 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 607.0
BYD3_k127_2725675_20 Glycosyl transferases group 1 - - - 0.00000000000000000000000001069 119.0
BYD3_k127_2725675_21 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus - - - 0.000000000000000000000003509 120.0
BYD3_k127_2725675_22 Methyltransferase domain - - - 0.00000000000002127 86.0
BYD3_k127_2725675_23 GDSL-like Lipase/Acylhydrolase - - - 0.000001464 61.0
BYD3_k127_2725675_3 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 580.0
BYD3_k127_2725675_4 Heparinase II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009904 548.0
BYD3_k127_2725675_5 COG2148 Sugar transferases involved in lipopolysaccharide synthesis K03606 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 458.0
BYD3_k127_2725675_6 epimerase dehydratase K02473,K08679 - 5.1.3.6,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 387.0
BYD3_k127_2725675_7 protein-glutamate methylesterase activity K00575,K03412,K03413 - 2.1.1.80,3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 371.0
BYD3_k127_2725675_8 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 295.0
BYD3_k127_2725675_9 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001003 284.0
BYD3_k127_2765433_0 Two-component sensor kinase N-terminal K07649 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 454.0
BYD3_k127_2765433_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 350.0
BYD3_k127_2774702_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 415.0
BYD3_k127_2774702_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 318.0
BYD3_k127_2774702_2 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 301.0
BYD3_k127_2774702_3 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008255 282.0
BYD3_k127_2774702_4 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005081 274.0
BYD3_k127_2774702_5 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002779 252.0
BYD3_k127_2774702_6 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000447 157.0
BYD3_k127_2774702_7 EamA-like transporter family K01918 - 6.3.2.1 0.00000000000000000003374 96.0
BYD3_k127_2836228_0 phosphoribosylamine-glycine ligase activity K01945,K01955 - 6.3.4.13,6.3.5.5 1.287e-207 652.0
BYD3_k127_2836228_1 PFAM glycosyl transferase group 1 K12995 - 2.4.1.348 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 458.0
BYD3_k127_2836228_10 Domain of unknown function (DUF4184) - - - 0.0000000000000001093 91.0
BYD3_k127_2836228_11 FMN-dependent dehydrogenase K00104 - 1.1.3.15 0.000000002312 59.0
BYD3_k127_2836228_12 Virulence factor Mce family protein K02067 - - 0.0004037 52.0
BYD3_k127_2836228_2 Protein involved in amylo-alpha-1,6-glucosidase activity and glycogen biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 391.0
BYD3_k127_2836228_3 Methyltransferase type 11 K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000000000000000000000000000001228 223.0
BYD3_k127_2836228_4 SMART cyclic nucleotide-binding K10914 - - 0.00000000000000000000000000000000000000000000000000000000000007675 219.0
BYD3_k127_2836228_5 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000004215 200.0
BYD3_k127_2836228_6 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000002672 171.0
BYD3_k127_2836228_7 Cold shock K03704 - - 0.000000000000000000000000000000000000001021 160.0
BYD3_k127_2836228_8 Tetratricopeptide repeat - - - 0.00000000000000000000000006753 121.0
BYD3_k127_2836228_9 ABC transporter - - - 0.0000000000000000006033 100.0
BYD3_k127_2932266_0 ABC transporter transmembrane region K02021 - - 1.07e-272 864.0
BYD3_k127_2932266_1 Aldehyde dehydrogenase K00128,K00130 - 1.2.1.3,1.2.1.8 2.097e-205 648.0
BYD3_k127_2932266_10 Prokaryotic N-terminal methylation motif - - - 0.000000000000000000001743 96.0
BYD3_k127_2932266_2 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00001,K00121 - 1.1.1.1,1.1.1.284 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 481.0
BYD3_k127_2932266_3 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000805 422.0
BYD3_k127_2932266_4 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 363.0
BYD3_k127_2932266_5 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005305 301.0
BYD3_k127_2932266_6 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005015 264.0
BYD3_k127_2932266_7 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000002494 240.0
BYD3_k127_2932266_8 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000002044 207.0
BYD3_k127_2932266_9 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000003597 152.0
BYD3_k127_2940675_0 ACT domain K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 596.0
BYD3_k127_2940675_1 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 532.0
BYD3_k127_2940675_10 pfkB family carbohydrate kinase K21344 - 2.7.1.167 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 372.0
BYD3_k127_2940675_11 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 339.0
BYD3_k127_2940675_12 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 317.0
BYD3_k127_2940675_13 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 323.0
BYD3_k127_2940675_14 peptidase S1 and S6, chymotrypsin Hap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 300.0
BYD3_k127_2940675_15 Belongs to the peptidase S1C family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008414 278.0
BYD3_k127_2940675_16 Belongs to the BI1 family K19416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000256 243.0
BYD3_k127_2940675_17 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000001032 243.0
BYD3_k127_2940675_18 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.000000000000000000000000000000000000000000006654 165.0
BYD3_k127_2940675_19 PAS fold - - - 0.0000000000000000000000000000000001801 144.0
BYD3_k127_2940675_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 516.0
BYD3_k127_2940675_20 Lipopolysaccharide assembly protein A domain K08992 - - 0.000000000000004581 81.0
BYD3_k127_2940675_21 - - - - 0.00000001128 66.0
BYD3_k127_2940675_22 Belongs to the 'phage' integrase family - - - 0.0000007448 53.0
BYD3_k127_2940675_24 Phage integrase family - - - 0.0001601 48.0
BYD3_k127_2940675_3 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 523.0
BYD3_k127_2940675_4 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 502.0
BYD3_k127_2940675_5 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 476.0
BYD3_k127_2940675_6 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 438.0
BYD3_k127_2940675_7 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 434.0
BYD3_k127_2940675_8 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004924 432.0
BYD3_k127_2940675_9 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 406.0
BYD3_k127_2948487_0 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K06158 - - 1.551e-204 655.0
BYD3_k127_2948487_1 VWA domain containing CoxE-like protein K09989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004962 571.0
BYD3_k127_2948487_2 2-keto-3-deoxy-galactonokinase K00883 - 2.7.1.58 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 292.0
BYD3_k127_2948487_3 Belongs to the ArsC family K00537 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.20.4.1 0.00000000000000000000000000000000002472 138.0
BYD3_k127_2955980_0 PAS fold - - - 4.104e-206 659.0
BYD3_k127_2955980_1 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 530.0
BYD3_k127_2955980_10 SMART PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001974 245.0
BYD3_k127_2955980_11 META domain K03929 - - 0.000000000000000000000000000000000000001866 156.0
BYD3_k127_2955980_12 COG0411 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.000000000000000000000000000000000003215 156.0
BYD3_k127_2955980_13 Cupin domain - - - 0.00000000000000000000000000000000001229 143.0
BYD3_k127_2955980_14 Voltage-dependent anion channel K03304 - - 0.0000000000000000000000000000001608 141.0
BYD3_k127_2955980_15 PFAM response regulator receiver - - - 0.00000000000000000000000009389 110.0
BYD3_k127_2955980_16 Domain of unknown function (DUF4189) - - - 0.000000000000000536 83.0
BYD3_k127_2955980_17 membrane - - - 0.000007103 54.0
BYD3_k127_2955980_18 esterase of the alpha-beta hydrolase superfamily - - - 0.00003653 54.0
BYD3_k127_2955980_19 Outer membrane protein V - - - 0.00009613 48.0
BYD3_k127_2955980_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006721 455.0
BYD3_k127_2955980_3 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 409.0
BYD3_k127_2955980_4 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 367.0
BYD3_k127_2955980_5 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 351.0
BYD3_k127_2955980_6 PFAM amidohydrolase 2 K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 338.0
BYD3_k127_2955980_7 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 292.0
BYD3_k127_2955980_8 PFAM intradiol ring-cleavage dioxygenase K04098 - 1.13.11.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 294.0
BYD3_k127_2955980_9 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001511 289.0
BYD3_k127_2987115_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008941 453.0
BYD3_k127_2987115_1 SMART Extracellular solute-binding protein, family 3 K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000256 268.0
BYD3_k127_3012671_0 Proton-conducting membrane transporter - - - 1.936e-280 875.0
BYD3_k127_3012671_1 ABC-type dipeptide transport system, periplasmic component K02035 - - 2.249e-227 715.0
BYD3_k127_3012671_10 N-terminal TM domain of oligopeptide transport permease C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 424.0
BYD3_k127_3012671_11 Belongs to the ABC transporter superfamily K02032,K12372 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005844 419.0
BYD3_k127_3012671_12 5'-nucleotidase K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 407.0
BYD3_k127_3012671_13 a g-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 357.0
BYD3_k127_3012671_14 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 321.0
BYD3_k127_3012671_15 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009167 319.0
BYD3_k127_3012671_16 COG4237 Hydrogenase 4 membrane component (E) K12140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001431 295.0
BYD3_k127_3012671_17 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003114 260.0
BYD3_k127_3012671_18 TIGRFAM Urea carboxylase-associated protein 1 K09967 - - 0.000000000000000000000000000000000000000000000000000000000000000000002862 240.0
BYD3_k127_3012671_19 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.000000000000000000000000000000000000000000000000000000002183 203.0
BYD3_k127_3012671_2 Proton-conducting membrane transporter K12141 - - 3.69e-215 689.0
BYD3_k127_3012671_20 Lipopolysaccharide export system ATP-binding protein K06861 - - 0.0000000000000000000000000000000000000000000000008583 175.0
BYD3_k127_3012671_21 peptidase S16 K07157 - - 0.0000000000000000000000000000000000000000002683 177.0
BYD3_k127_3012671_22 ribosomal subunit interface protein K05808 - - 0.00000000000000000000000000000000001227 137.0
BYD3_k127_3012671_23 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000001385 115.0
BYD3_k127_3012671_24 COG2104 Sulfur transfer protein involved in thiamine biosynthesis K03154 - - 0.000000000644 61.0
BYD3_k127_3012671_25 - - - - 0.00002439 51.0
BYD3_k127_3012671_3 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 1.188e-209 655.0
BYD3_k127_3012671_4 NADH-ubiquinone oxidoreductase chain 49kDa - - - 9.013e-203 642.0
BYD3_k127_3012671_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 558.0
BYD3_k127_3012671_6 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 492.0
BYD3_k127_3012671_7 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006022 478.0
BYD3_k127_3012671_8 Metal-dependent amidase aminoacylase carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 471.0
BYD3_k127_3012671_9 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 430.0
BYD3_k127_3023744_0 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 1.032e-235 746.0
BYD3_k127_3023744_1 Belongs to the thiolase family K00626 - 2.3.1.9 3.29e-202 636.0
BYD3_k127_3023744_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000596 273.0
BYD3_k127_3023744_3 acyl-CoA dehydrogenase K06445 - - 0.0000000000000000000000000000000000000000000000000000000000000000002279 236.0
BYD3_k127_3023744_4 Thioesterase superfamily K10806 - - 0.000000000000000000000000000000000000000000000000007785 183.0
BYD3_k127_3023744_5 MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000000003174 171.0
BYD3_k127_3023744_6 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000005366 173.0
BYD3_k127_3023744_7 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000007012 169.0
BYD3_k127_3128741_0 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 1.265e-195 619.0
BYD3_k127_3128741_1 PFAM Peptidase M48 K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 450.0
BYD3_k127_3128741_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001191 258.0
BYD3_k127_3128741_11 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000002757 218.0
BYD3_k127_3128741_12 Membrane - - - 0.000000000000000000000000000000000000000000004353 178.0
BYD3_k127_3128741_13 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000000000002973 163.0
BYD3_k127_3128741_14 PFAM ribosomal protein L31 K02909 - - 0.000000000000000000000000000005534 121.0
BYD3_k127_3128741_15 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000445 93.0
BYD3_k127_3128741_16 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.00000000000000000006547 90.0
BYD3_k127_3128741_2 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 424.0
BYD3_k127_3128741_3 Belongs to the GPI family K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 422.0
BYD3_k127_3128741_4 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 403.0
BYD3_k127_3128741_5 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 310.0
BYD3_k127_3128741_6 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 314.0
BYD3_k127_3128741_7 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 297.0
BYD3_k127_3128741_8 Predicted membrane protein (DUF2238) K08984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000296 287.0
BYD3_k127_3128741_9 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001411 268.0
BYD3_k127_3164991_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 6.51e-273 852.0
BYD3_k127_3164991_1 Belongs to the peptidase M16 family K07263 - - 1.053e-272 867.0
BYD3_k127_3164991_10 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001229 277.0
BYD3_k127_3164991_11 Redoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000002836 246.0
BYD3_k127_3164991_12 Putative methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001986 254.0
BYD3_k127_3164991_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001976 228.0
BYD3_k127_3164991_14 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000001267 210.0
BYD3_k127_3164991_15 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000209 196.0
BYD3_k127_3164991_16 Branched-chain amino acid permease - - - 0.0000000000000000000000000000000000000000000003175 177.0
BYD3_k127_3164991_17 Cupin domain - - - 0.0000000000000000000000000000000000000000000008313 174.0
BYD3_k127_3164991_18 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000006119 167.0
BYD3_k127_3164991_19 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000000000000000000000003802 138.0
BYD3_k127_3164991_2 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 2.1e-222 701.0
BYD3_k127_3164991_20 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.000000000000000000000000000001137 128.0
BYD3_k127_3164991_21 Acetyltransferase (GNAT) domain K03828 - - 0.000000000000000000000000000007149 127.0
BYD3_k127_3164991_22 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000004025 69.0
BYD3_k127_3164991_23 Branched-chain amino acid transport protein (AzlD) - - - 0.00000001949 63.0
BYD3_k127_3164991_24 hyperosmotic response - - - 0.00001107 58.0
BYD3_k127_3164991_25 Domain of unknown function (DUF4398) - - - 0.0001095 50.0
BYD3_k127_3164991_3 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 533.0
BYD3_k127_3164991_4 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 499.0
BYD3_k127_3164991_5 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 436.0
BYD3_k127_3164991_6 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 370.0
BYD3_k127_3164991_7 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 357.0
BYD3_k127_3164991_8 dihydrofolate reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 328.0
BYD3_k127_3164991_9 Uncharacterized conserved protein (DUF2183) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003825 326.0
BYD3_k127_324962_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 3.542e-247 773.0
BYD3_k127_324962_1 Ketopantoate reductase PanE/ApbA C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006656 469.0
BYD3_k127_324962_2 Taurine catabolism dioxygenase TauD, TfdA family K03119,K22303 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 379.0
BYD3_k127_324962_3 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005488 278.0
BYD3_k127_324962_4 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003181 242.0
BYD3_k127_324962_5 cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000003169 193.0
BYD3_k127_324962_6 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000005069 141.0
BYD3_k127_324962_7 Protein of unknown function (DUF3568) - - - 0.000000000000000000006397 98.0
BYD3_k127_324962_8 Rubrerythrin - - - 0.00000000149 66.0
BYD3_k127_3252092_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1008.0
BYD3_k127_3252092_1 alpha beta - - - 0.00000000000000000000000000000000000000000000000000004121 196.0
BYD3_k127_3252092_2 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.000000000009931 68.0
BYD3_k127_3252092_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000007335 54.0
BYD3_k127_3252204_0 Patatin phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009187 456.0
BYD3_k127_3252204_1 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000465 441.0
BYD3_k127_3252204_10 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000002782 183.0
BYD3_k127_3252204_11 Putative DNA-binding domain - - - 0.000000000000000000000000000000000000000000000002279 185.0
BYD3_k127_3252204_12 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000004313 181.0
BYD3_k127_3252204_13 Cupin domain - - - 0.00000000000000000000000000000000000000000002678 171.0
BYD3_k127_3252204_14 Predicted integral membrane protein (DUF2282) - - - 0.0000000000000000000000000007666 115.0
BYD3_k127_3252204_15 - - - - 0.000000000000008146 81.0
BYD3_k127_3252204_16 Transmembrane anti-sigma factor - - - 0.0000000007819 62.0
BYD3_k127_3252204_17 Bacterial protein of unknown function (DUF883) - GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0043021,GO:0043024,GO:0044464,GO:0044877,GO:0060187,GO:0071944 - 0.000000009773 62.0
BYD3_k127_3252204_2 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 400.0
BYD3_k127_3252204_3 Enoyl-(Acyl carrier protein) reductase K00019 - 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 381.0
BYD3_k127_3252204_4 Belongs to the UPF0276 family K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 376.0
BYD3_k127_3252204_5 ABC transporter, phosphonate, periplasmic substrate-binding protein K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005334 346.0
BYD3_k127_3252204_6 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 300.0
BYD3_k127_3252204_7 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002595 254.0
BYD3_k127_3252204_8 Domain of unknown function (DUF1993) K09983 - - 0.0000000000000000000000000000000000000000000000000000000000001055 218.0
BYD3_k127_3252204_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000589 195.0
BYD3_k127_3256496_0 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0 1079.0
BYD3_k127_3256496_1 4 iron, 4 sulfur cluster binding - - - 1.466e-231 727.0
BYD3_k127_3256496_10 Bacterial regulatory proteins, luxR family - - - 0.00000000001731 67.0
BYD3_k127_3256496_11 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000001102 65.0
BYD3_k127_3256496_12 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000007723 56.0
BYD3_k127_3256496_13 - - - - 0.0000001775 60.0
BYD3_k127_3256496_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 531.0
BYD3_k127_3256496_3 mannitol 2-dehydrogenase activity K11690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 472.0
BYD3_k127_3256496_4 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009819 449.0
BYD3_k127_3256496_5 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 308.0
BYD3_k127_3256496_6 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000003247 244.0
BYD3_k127_3256496_7 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000472 135.0
BYD3_k127_3256496_8 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000006509 126.0
BYD3_k127_3256496_9 TRAP transporter T-component - - - 0.000000000000000386 89.0
BYD3_k127_3283743_0 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 435.0
BYD3_k127_3283743_1 YHS domain protein - - - 0.000000000000000000000000009885 114.0
BYD3_k127_3283743_2 YHS domain protein - - - 0.0000000000000000000000006451 109.0
BYD3_k127_3283743_3 PD-(D/E)XK nuclease superfamily K01144 - 3.1.11.5 0.00000000000000000000806 95.0
BYD3_k127_3293741_0 protein conserved in bacteria K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 444.0
BYD3_k127_3293741_1 surface antigen (D15) K07278 - - 0.000000000000000000000000000000000000000000000000000000000000001878 228.0
BYD3_k127_3293741_2 Orn/Lys/Arg decarboxylase, C-terminal domain K01584 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000002127 221.0
BYD3_k127_3297425_0 Psort location Cytoplasmic, score 7.50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 418.0
BYD3_k127_3297425_1 taurine catabolism dioxygenase K03119 - 1.14.11.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006609 344.0
BYD3_k127_3297425_2 Belongs to the ABC transporter superfamily K02010,K02052 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007128 318.0
BYD3_k127_3297425_3 Pfam:Methyltransf_6 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005311 261.0
BYD3_k127_3297425_4 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000000000000000004726 258.0
BYD3_k127_3297425_5 Binding-protein-dependent transport systems inner membrane component - - - 0.000000000000000000000000000000000000000000000002267 187.0
BYD3_k127_3297425_6 Thioesterase-like superfamily - - - 0.000000000000000001033 93.0
BYD3_k127_3297425_7 Binding-protein-dependent transport system inner membrane component K02054 - - 0.000000000000000001357 88.0
BYD3_k127_3297425_8 Tripartite tricarboxylate transporter family receptor - - - 0.00001857 47.0
BYD3_k127_3297483_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 516.0
BYD3_k127_3297483_1 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000000000000000000001175 137.0
BYD3_k127_3298190_0 Transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296,K18138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004879 599.0
BYD3_k127_3298190_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K18145 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 340.0
BYD3_k127_3298190_2 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000003694 230.0
BYD3_k127_3298190_3 COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes - - - 0.00000000000000000000000000000000000000005547 155.0
BYD3_k127_3298190_4 Bacterial transcriptional repressor C-terminal - - - 0.000000000000000000000000000000000004888 143.0
BYD3_k127_3317955_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 3.382e-268 837.0
BYD3_k127_3317955_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007366 421.0
BYD3_k127_3320467_0 4Fe-4S dicluster domain - - - 0.0 1183.0
BYD3_k127_3320467_1 Belongs to the IlvD Edd family - - - 3.378e-276 857.0
BYD3_k127_3320467_10 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 428.0
BYD3_k127_3320467_11 ATPases associated with a variety of cellular activities K02049,K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 396.0
BYD3_k127_3320467_12 Binding-protein-dependent transport system inner membrane component K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 404.0
BYD3_k127_3320467_13 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 391.0
BYD3_k127_3320467_14 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 353.0
BYD3_k127_3320467_15 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 362.0
BYD3_k127_3320467_16 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005161 306.0
BYD3_k127_3320467_17 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001356 280.0
BYD3_k127_3320467_18 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001001 273.0
BYD3_k127_3320467_19 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0008824,GO:0009056,GO:0009439,GO:0009440,GO:0009987,GO:0016829,GO:0016840,GO:0034641,GO:0044237,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0071704,GO:1901564,GO:1901565,GO:1901575 4.2.1.104 0.0000000000000000000000000000000000000000000000000000000000000000001349 237.0
BYD3_k127_3320467_2 Protein of unknown function, DUF255 K06888 - - 9.293e-247 781.0
BYD3_k127_3320467_20 PFAM cytochrome c, class I - - - 0.00000000000000000000000000000000000000000000000000000000002615 215.0
BYD3_k127_3320467_21 PFAM Bacterial protein of - - - 0.0000000000000000000000000000000000000000000000000000000002626 210.0
BYD3_k127_3320467_22 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000002734 203.0
BYD3_k127_3320467_23 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000000000000000000000000000000000000000000008679 188.0
BYD3_k127_3320467_24 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000001451 172.0
BYD3_k127_3320467_25 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000002116 177.0
BYD3_k127_3320467_26 protein involved in tolerance to divalent cations K03926 - - 0.00000000000000000000000000000000000000001179 155.0
BYD3_k127_3320467_27 Cytochrome c K08738 - - 0.000000000000000000000000000712 121.0
BYD3_k127_3320467_28 - - - - 0.00000000000000000003706 96.0
BYD3_k127_3320467_29 cytochrome - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000002845 73.0
BYD3_k127_3320467_3 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051,K15576 - - 1.955e-228 714.0
BYD3_k127_3320467_4 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 600.0
BYD3_k127_3320467_5 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007199 559.0
BYD3_k127_3320467_6 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007073 498.0
BYD3_k127_3320467_7 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006145 489.0
BYD3_k127_3320467_8 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 460.0
BYD3_k127_3320467_9 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 466.0
BYD3_k127_3330037_0 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 447.0
BYD3_k127_3330037_1 HD domain K07814,K13815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 381.0
BYD3_k127_3330037_2 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 380.0
BYD3_k127_3330037_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007754 265.0
BYD3_k127_3330037_4 PFAM Cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000008606 181.0
BYD3_k127_3330037_5 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000002935 140.0
BYD3_k127_3330037_6 Alpha/beta hydrolase family K00641 - 2.3.1.31 0.00000000000000000000000000005204 117.0
BYD3_k127_3330037_7 EamA-like transporter family - - - 0.00000000000000000000000003608 120.0
BYD3_k127_3330037_8 helix_turn_helix, Lux Regulon K14979 - - 0.0000000000000000002886 91.0
BYD3_k127_3330037_9 - - - - 0.000009839 48.0
BYD3_k127_3331345_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1245.0
BYD3_k127_3331345_1 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 3.017e-253 791.0
BYD3_k127_3331345_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 382.0
BYD3_k127_3331345_3 extracellular solute-binding protein, family 1 K02020,K22003 - 5.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007462 326.0
BYD3_k127_3331345_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001202 286.0
BYD3_k127_3331345_5 CoA binding domain K06929 - - 0.000000000000000000000000000000000000000000000000000000000000000000287 236.0
BYD3_k127_3331345_6 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000001013 125.0
BYD3_k127_3331345_7 - - - - 0.00000001313 57.0
BYD3_k127_3360249_0 Type I GTP cyclohydrolase folE2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 404.0
BYD3_k127_3360249_1 Glutamine amidotransferase class-I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 303.0
BYD3_k127_3360249_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000003926 248.0
BYD3_k127_3360249_3 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000000009658 222.0
BYD3_k127_3360249_4 Aspartyl protease K06985 - - 0.00000000000000000000000000000000000000000000000000000001796 204.0
BYD3_k127_3360249_5 Arginosuccinate synthase K01940 - 6.3.4.5 0.0000000000000000000000000000000000002458 144.0
BYD3_k127_3490651_0 gluconolactonase K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006971 444.0
BYD3_k127_3490651_1 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005241 254.0
BYD3_k127_3490651_2 - - - - 0.0000000000000000000000000000000000003238 147.0
BYD3_k127_3490651_3 CHRD domain - - - 0.0000000000000000000000000000002426 130.0
BYD3_k127_3490651_4 - - - - 0.00000000000000000000000007481 113.0
BYD3_k127_3490651_5 FAD binding domain K13796 - - 0.0000000000000000000003812 96.0
BYD3_k127_355152_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 475.0
BYD3_k127_355152_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000001278 242.0
BYD3_k127_3577933_0 Uncharacterized ACR, YdiU/UPF0061 family - - - 3.022e-218 687.0
BYD3_k127_3577933_1 Protein of unknown function (DUF1343) - - - 6.608e-204 641.0
BYD3_k127_3577933_2 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003175 261.0
BYD3_k127_3577933_3 involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000007946 173.0
BYD3_k127_3577933_4 Belongs to the CinA family - - - 0.0000000000000000000000000000000000000000002507 163.0
BYD3_k127_3577933_5 - - - - 0.00000000000000000000000000000000000004548 155.0
BYD3_k127_3577933_6 Malate/L-lactate dehydrogenase - - - 0.00000000000000000000000000000000008996 135.0
BYD3_k127_3577933_7 histidine kinase A domain protein - - - 0.000000000000000000000002759 107.0
BYD3_k127_3610285_0 NADH flavin oxidoreductase NADH oxidase K09461 - 1.14.13.40 0.0 1045.0
BYD3_k127_3610285_1 Indolepyruvate ferredoxin oxidoreductase K00179 - 1.2.7.8 2.272e-299 931.0
BYD3_k127_3610285_10 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 499.0
BYD3_k127_3610285_11 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006932 478.0
BYD3_k127_3610285_12 Pyruvate ferredoxin/flavodoxin oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 463.0
BYD3_k127_3610285_13 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005236 462.0
BYD3_k127_3610285_14 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 443.0
BYD3_k127_3610285_15 Gentisate 1,2-dioxygenase K00450 - 1.13.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 442.0
BYD3_k127_3610285_16 Domain of unknown function (DUF4147) K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008842 443.0
BYD3_k127_3610285_17 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 438.0
BYD3_k127_3610285_18 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009222 428.0
BYD3_k127_3610285_19 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 438.0
BYD3_k127_3610285_2 indolepyruvate ferredoxin oxidoreductase K00179 - 1.2.7.8 1.246e-291 927.0
BYD3_k127_3610285_20 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008109 414.0
BYD3_k127_3610285_21 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007804 402.0
BYD3_k127_3610285_22 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 421.0
BYD3_k127_3610285_23 Dehydrogenase K15054 - 1.1.99.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 397.0
BYD3_k127_3610285_24 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 394.0
BYD3_k127_3610285_25 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004664 394.0
BYD3_k127_3610285_26 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 374.0
BYD3_k127_3610285_27 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 364.0
BYD3_k127_3610285_28 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 372.0
BYD3_k127_3610285_29 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 347.0
BYD3_k127_3610285_3 Belongs to the IlvD Edd family K01687 - 4.2.1.9 2.638e-263 821.0
BYD3_k127_3610285_30 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007756 344.0
BYD3_k127_3610285_31 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 334.0
BYD3_k127_3610285_32 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 335.0
BYD3_k127_3610285_33 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000982 348.0
BYD3_k127_3610285_34 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 329.0
BYD3_k127_3610285_35 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 331.0
BYD3_k127_3610285_36 Branched-chain amino acid ATP-binding cassette transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 294.0
BYD3_k127_3610285_37 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009154 303.0
BYD3_k127_3610285_38 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007964 287.0
BYD3_k127_3610285_39 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001945 276.0
BYD3_k127_3610285_4 AMP-binding enzyme C-terminal domain K08295 - 6.2.1.32 2.074e-236 743.0
BYD3_k127_3610285_40 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000368 284.0
BYD3_k127_3610285_41 50S ribosomal protein L4 K02926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007666 276.0
BYD3_k127_3610285_42 esterase K01432 - 3.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005517 284.0
BYD3_k127_3610285_43 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009647 269.0
BYD3_k127_3610285_44 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004682 249.0
BYD3_k127_3610285_45 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005452 252.0
BYD3_k127_3610285_46 PFAM pyridoxamine 5-phosphate K07006 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005981 246.0
BYD3_k127_3610285_47 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001678 241.0
BYD3_k127_3610285_48 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000000000005847 233.0
BYD3_k127_3610285_49 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000000000001169 229.0
BYD3_k127_3610285_5 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 2.343e-233 727.0
BYD3_k127_3610285_50 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000001872 228.0
BYD3_k127_3610285_51 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000000000000001029 221.0
BYD3_k127_3610285_52 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000003493 224.0
BYD3_k127_3610285_53 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000156 235.0
BYD3_k127_3610285_54 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000000000000000000173 214.0
BYD3_k127_3610285_55 Cupin 2, conserved barrel - - - 0.000000000000000000000000000000000000000000000000000000000474 203.0
BYD3_k127_3610285_56 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000002936 203.0
BYD3_k127_3610285_57 AAA domain, putative AbiEii toxin, Type IV TA system K01996 - - 0.0000000000000000000000000000000000000000000000000000004814 213.0
BYD3_k127_3610285_58 esterase K01432 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000004989 203.0
BYD3_k127_3610285_59 PFAM regulatory protein, MarR - - - 0.000000000000000000000000000000000000000000000000000003539 194.0
BYD3_k127_3610285_6 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 552.0
BYD3_k127_3610285_60 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000000000000000000004576 203.0
BYD3_k127_3610285_61 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000009377 186.0
BYD3_k127_3610285_62 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000003471 189.0
BYD3_k127_3610285_63 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000005016 186.0
BYD3_k127_3610285_64 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000000000004358 182.0
BYD3_k127_3610285_65 binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000005087 183.0
BYD3_k127_3610285_66 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000556 180.0
BYD3_k127_3610285_67 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000000000000000000000009383 178.0
BYD3_k127_3610285_68 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000000000000000000000000005656 173.0
BYD3_k127_3610285_69 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000001396 159.0
BYD3_k127_3610285_7 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 542.0
BYD3_k127_3610285_70 response regulator - - - 0.0000000000000000000000000000000000000001249 160.0
BYD3_k127_3610285_71 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000004252 149.0
BYD3_k127_3610285_72 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000000000000001142 141.0
BYD3_k127_3610285_73 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000000000000000000258 138.0
BYD3_k127_3610285_74 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000001381 134.0
BYD3_k127_3610285_75 ACT domain - - - 0.00000000000000000000000000001029 133.0
BYD3_k127_3610285_76 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000000008032 120.0
BYD3_k127_3610285_77 PFAM aromatic-ring-hydroxylating dioxygenase beta subunit - - - 0.00000000000000000000000006885 113.0
BYD3_k127_3610285_78 Trap-type c4-dicarboxylate transport system, small permease component - - - 0.0000000000000000000000004601 112.0
BYD3_k127_3610285_79 Predicted membrane protein (DUF2061) - - - 0.000000000000000004824 86.0
BYD3_k127_3610285_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 537.0
BYD3_k127_3610285_80 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000000001338 83.0
BYD3_k127_3610285_81 Ribosomal protein L30 K02907 - - 0.00000000000000001369 85.0
BYD3_k127_3610285_82 Ribosomal protein L36 K02919 - - 0.0000000000001808 70.0
BYD3_k127_3610285_83 Bacterial regulatory proteins, tetR family - - - 0.000000000003227 74.0
BYD3_k127_3610285_84 - - - - 0.0000000004829 69.0
BYD3_k127_3610285_85 - - - - 0.0000000008907 63.0
BYD3_k127_3610285_9 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005672 504.0
BYD3_k127_3619183_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2121.0
BYD3_k127_3619183_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1944.0
BYD3_k127_3621951_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 2.857e-310 985.0
BYD3_k127_3621951_1 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 487.0
BYD3_k127_3621951_2 Two component transcriptional regulator, winged helix family K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 315.0
BYD3_k127_3621951_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000435 247.0
BYD3_k127_3621951_4 Efflux transporter, outer membrane factor lipoprotein, NodT family K18139 - - 0.00000000000000000000000000000000000000000000000000000000000000000003039 249.0
BYD3_k127_3621951_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000001737 211.0
BYD3_k127_3621951_6 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000002335 203.0
BYD3_k127_3621951_7 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000001309 196.0
BYD3_k127_3650230_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 573.0
BYD3_k127_3650230_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007918 279.0
BYD3_k127_3650230_2 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.00000000002173 66.0
BYD3_k127_3655097_0 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007546 585.0
BYD3_k127_3655097_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 569.0
BYD3_k127_3655097_10 Required for insertion of 4Fe-4S clusters K15724 - - 0.00000000000000000000000000000000000000000000000000000000000001056 216.0
BYD3_k127_3655097_11 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000001602 215.0
BYD3_k127_3655097_12 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000000000002628 211.0
BYD3_k127_3655097_13 - - - - 0.000000000000000000000000000000000000000000000006479 184.0
BYD3_k127_3655097_14 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000000000000000000005179 169.0
BYD3_k127_3655097_15 - - - - 0.000000000001062 77.0
BYD3_k127_3655097_16 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000636 66.0
BYD3_k127_3655097_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007118 553.0
BYD3_k127_3655097_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 509.0
BYD3_k127_3655097_4 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000869 502.0
BYD3_k127_3655097_5 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004222 399.0
BYD3_k127_3655097_6 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007488 355.0
BYD3_k127_3655097_7 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 344.0
BYD3_k127_3655097_8 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004056 274.0
BYD3_k127_3655097_9 regulator of disulfide bond formation K07397 - - 0.000000000000000000000000000000000000000000000000000000000000000503 222.0
BYD3_k127_3660582_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 2.788e-203 639.0
BYD3_k127_3660582_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 396.0
BYD3_k127_3660582_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000002641 249.0
BYD3_k127_3673999_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895,K01907 - 6.2.1.1,6.2.1.16 3.188e-291 906.0
BYD3_k127_3673999_1 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 2.339e-245 767.0
BYD3_k127_3673999_2 Imidazolone-5-propionate hydrolase K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 490.0
BYD3_k127_3673999_3 Amidohydrolase family K05603 - 3.5.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 444.0
BYD3_k127_3673999_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006486 391.0
BYD3_k127_3673999_5 N-formylglutamate amidohydrolase K01458,K01479 - 3.5.1.68,3.5.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004944 303.0
BYD3_k127_3673999_6 Thioesterase superfamily K07107 - - 0.00000000000000000000000000000000000007309 145.0
BYD3_k127_3673999_7 Histidine kinase A domain protein - - - 0.000000000000000000000000004075 116.0
BYD3_k127_3673999_8 PAS fold K02484 - 2.7.13.3 0.00000000000000007856 91.0
BYD3_k127_369857_0 AMP-binding enzyme K01895 - 6.2.1.1 2.962e-243 762.0
BYD3_k127_369857_1 Tripartite tricarboxylate transporter TctA family K07793 - - 3.892e-220 696.0
BYD3_k127_369857_10 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000217 274.0
BYD3_k127_369857_11 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000132 228.0
BYD3_k127_369857_12 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000004818 189.0
BYD3_k127_369857_14 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000008037 117.0
BYD3_k127_369857_15 Acetyltransferase (GNAT) family - - - 0.00000000000000000001284 95.0
BYD3_k127_369857_16 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000003003 88.0
BYD3_k127_369857_2 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 566.0
BYD3_k127_369857_3 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 440.0
BYD3_k127_369857_4 Dihydroorotate dehydrogenase K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 389.0
BYD3_k127_369857_5 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 358.0
BYD3_k127_369857_6 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006742 302.0
BYD3_k127_369857_7 Leucyl/phenylalanyl-tRNA protein transferase K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 290.0
BYD3_k127_369857_8 Nudix N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003823 273.0
BYD3_k127_369857_9 plastoquinol--plastocyanin reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003315 258.0
BYD3_k127_3741812_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 484.0
BYD3_k127_3741812_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000004668 138.0
BYD3_k127_3741812_2 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000107 107.0
BYD3_k127_3746459_0 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 7.984e-309 964.0
BYD3_k127_3746459_1 FtsX-like permease family K02004 - - 9.906e-242 776.0
BYD3_k127_3746459_10 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.0000000000000000000000000000000000000000000000000001945 188.0
BYD3_k127_3746459_11 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.000000000000000000000000003392 114.0
BYD3_k127_3746459_2 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 514.0
BYD3_k127_3746459_3 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005243 441.0
BYD3_k127_3746459_4 Rhodanese Homology Domain K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 396.0
BYD3_k127_3746459_5 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001921 283.0
BYD3_k127_3746459_6 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004611 284.0
BYD3_k127_3746459_7 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000002016 243.0
BYD3_k127_3746459_8 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000004725 228.0
BYD3_k127_3746459_9 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000000000000000000000000000006206 213.0
BYD3_k127_3754555_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 440.0
BYD3_k127_3754555_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 410.0
BYD3_k127_3754555_2 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 307.0
BYD3_k127_3754555_3 Outer membrane efflux protein K18903 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004692 300.0
BYD3_k127_3754555_4 - - - - 0.00000000000000000000000000000000000000000000000000000000002145 215.0
BYD3_k127_3754555_5 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000005957 168.0
BYD3_k127_3754555_6 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12976 - - 0.0000000000000000001332 96.0
BYD3_k127_3754555_7 Pfam Sulfatase K01133 - 3.1.6.6 0.0000000000000002334 80.0
BYD3_k127_3754555_8 PFAM response regulator receiver K13599 - - 0.000000000002359 74.0
BYD3_k127_3789962_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 0.0 1375.0
BYD3_k127_3789962_1 Secretin and TonB N terminus short domain K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 490.0
BYD3_k127_3789962_10 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000008923 121.0
BYD3_k127_3789962_11 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.000000000000000000002809 108.0
BYD3_k127_3789962_12 phosphoprotein phosphatase activity - - - 0.0000000000000003162 91.0
BYD3_k127_3789962_2 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006248 445.0
BYD3_k127_3789962_3 ATP-grasp - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 389.0
BYD3_k127_3789962_4 Right handed beta helix region - - - 0.00000000000000000000000000000000000000000000000000000000003523 222.0
BYD3_k127_3789962_5 WbqC-like protein family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000008299 207.0
BYD3_k127_3789962_6 prepilin-type N-terminal cleavage methylation K02456 - - 0.00000000000000000000000000000000000000000000000001277 198.0
BYD3_k127_3789962_7 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000002033 169.0
BYD3_k127_3789962_8 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000002789 138.0
BYD3_k127_3789962_9 Type II secretory pathway, pseudopilin - - - 0.000000000000000000000000000000001666 140.0
BYD3_k127_379033_0 PFAM extracellular solute-binding protein, family 5 K02035 - - 4.262e-201 638.0
BYD3_k127_379033_1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009186 564.0
BYD3_k127_379033_10 Domain of unknown function (DUF4124) - - - 0.00000000000000000000000000002747 123.0
BYD3_k127_379033_11 TYPE 4 fimbrial BIOGENESIS K02672 - - 0.0000000000000000000001027 106.0
BYD3_k127_379033_12 COG4968 Tfp pilus assembly protein PilE K02655 - - 0.0000000000000000000002557 102.0
BYD3_k127_379033_13 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000429 97.0
BYD3_k127_379033_14 Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC) - - - 0.000000000000000001626 85.0
BYD3_k127_379033_15 Type II transport protein GspH K08084 - - 0.000000000000005819 81.0
BYD3_k127_379033_2 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 431.0
BYD3_k127_379033_3 ABC-type transporter, permease component PepT family K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008067 371.0
BYD3_k127_379033_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000002958 218.0
BYD3_k127_379033_5 Carbohydrate esterase, sialic acid-specific acetylesterase - - - 0.0000000000000000000000000000000000000000000747 175.0
BYD3_k127_379033_6 Biotin protein ligase C terminal domain K03524 - 6.3.4.15 0.000000000000000000000000000000000000000007163 163.0
BYD3_k127_379033_7 type IV pilus modification protein PilV K02671 - - 0.00000000000000000000000000000000001191 147.0
BYD3_k127_379033_8 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase - - - 0.0000000000000000000000000000000001892 133.0
BYD3_k127_379033_9 PFAM Sporulation domain protein - - - 0.000000000000000000000000000001253 131.0
BYD3_k127_3899252_0 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 7.343e-242 756.0
BYD3_k127_3899252_1 Na Pi-cotransporter II-related protein K03324 - - 1.577e-197 630.0
BYD3_k127_3899252_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K00836 - 2.6.1.19,2.6.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 556.0
BYD3_k127_3899252_3 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004721 277.0
BYD3_k127_3899252_4 phosphonate ABC transporter, inner membrane subunit K02042 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004088 262.0
BYD3_k127_3899252_5 domain protein - - - 0.00000006817 65.0
BYD3_k127_3899252_6 EamA-like transporter family - - - 0.000002807 51.0
BYD3_k127_3904886_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004851 473.0
BYD3_k127_3904886_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 425.0
BYD3_k127_3904886_2 Arginase family K01476 - 3.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000001341 244.0
BYD3_k127_3904886_3 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000008604 203.0
BYD3_k127_3904886_4 Lumazine binding domain K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000003468 208.0
BYD3_k127_3904886_5 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000001476 194.0
BYD3_k127_3904886_6 SPW repeat - - - 0.000001486 59.0
BYD3_k127_3912953_0 Hydantoinase B/oxoprolinase - - - 0.0 1026.0
BYD3_k127_3912953_1 Hydantoinase/oxoprolinase K01469,K01473 - 3.5.2.14,3.5.2.9 1.195e-320 996.0
BYD3_k127_3912953_10 Aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006025 393.0
BYD3_k127_3912953_11 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 392.0
BYD3_k127_3912953_12 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004502 386.0
BYD3_k127_3912953_13 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 368.0
BYD3_k127_3912953_14 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004348 284.0
BYD3_k127_3912953_15 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K12972 - 1.1.1.79,1.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000007975 271.0
BYD3_k127_3912953_16 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001004 252.0
BYD3_k127_3912953_17 MerR, DNA binding K13639 - - 0.0000000000000000000000000000000000000000000000000000000000000000008933 229.0
BYD3_k127_3912953_18 Protein of unknown function (DUF2938) - - - 0.000000000000000000000000000000000000000000000000000000000000000003258 230.0
BYD3_k127_3912953_19 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000009047 232.0
BYD3_k127_3912953_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 1.228e-242 771.0
BYD3_k127_3912953_20 membrane transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000002015 224.0
BYD3_k127_3912953_21 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000005097 204.0
BYD3_k127_3912953_22 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000001189 190.0
BYD3_k127_3912953_23 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000000000000002218 182.0
BYD3_k127_3912953_24 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000001287 154.0
BYD3_k127_3912953_25 Domain of unknown function (DUF427) - - - 0.00000000000000000000000000000001014 132.0
BYD3_k127_3912953_26 Glyoxalase bleomycin resistance protein dioxygenase K06991 - - 0.0000000000000000000000000001873 121.0
BYD3_k127_3912953_27 Cupin domain K21700 - - 0.0000000000000000000000000001978 120.0
BYD3_k127_3912953_28 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000374 110.0
BYD3_k127_3912953_29 Protein of unknown function (DUF2798) - - - 0.000000000000000000000001793 112.0
BYD3_k127_3912953_3 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 4.108e-208 667.0
BYD3_k127_3912953_30 SnoaL-like domain - - - 0.000000000000001683 86.0
BYD3_k127_3912953_4 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 613.0
BYD3_k127_3912953_5 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 571.0
BYD3_k127_3912953_6 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 520.0
BYD3_k127_3912953_7 Methionine synthase K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006835 475.0
BYD3_k127_3912953_8 L-seryl-tRNA selenium transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 461.0
BYD3_k127_3912953_9 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007592 441.0
BYD3_k127_3916320_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 436.0
BYD3_k127_3916320_1 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000113 186.0
BYD3_k127_3916320_2 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000004101 173.0
BYD3_k127_3916320_3 acetyltransferase K18816 GO:0003674,GO:0003824,GO:0008080,GO:0008150,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0034069,GO:0042221,GO:0046677,GO:0047663,GO:0050896 2.3.1.82 0.0000000000000000000000000000000005535 132.0
BYD3_k127_3916320_4 PFAM glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000006212 120.0
BYD3_k127_3916320_5 MarR family transcriptional regulator - - - 0.0000000000000000000001255 103.0
BYD3_k127_3959463_0 Protein of unknown function (DUF445) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 337.0
BYD3_k127_3959463_1 - - - - 0.0000000000000000000000000000000000000000000000000000007735 202.0
BYD3_k127_3959463_2 PFAM GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.00000000000000000000000000000000000000000001825 164.0
BYD3_k127_3959463_3 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.00000000000000000000000000000000000254 151.0
BYD3_k127_3959463_4 UPF0391 membrane protein - - - 0.00000000001345 66.0
BYD3_k127_3959463_5 Pyridine nucleotide-disulphide oxidoreductase K05297,K12265 - 1.18.1.1 0.0003445 51.0
BYD3_k127_398700_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 3.218e-255 799.0
BYD3_k127_398700_1 Belongs to the binding-protein-dependent transport system permease family K01997,K01998 - - 1.875e-232 733.0
BYD3_k127_398700_10 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000005463 258.0
BYD3_k127_398700_11 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000001834 196.0
BYD3_k127_398700_12 SOS response associated peptidase (SRAP) - - - 0.000000000000000000000000000000002443 145.0
BYD3_k127_398700_2 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0000183,GO:0001302,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0016874,GO:0016879,GO:0018130,GO:0019219,GO:0019222,GO:0019357,GO:0019358,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032502,GO:0034641,GO:0034654,GO:0040029,GO:0043094,GO:0043173,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046497,GO:0048519,GO:0048523,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051252,GO:0051253,GO:0051276,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000625 582.0
BYD3_k127_398700_3 Extracellular liganD-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 554.0
BYD3_k127_398700_4 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 395.0
BYD3_k127_398700_5 Dimerisation domain of Zinc Transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000583 374.0
BYD3_k127_398700_6 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007417 349.0
BYD3_k127_398700_7 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009094 311.0
BYD3_k127_398700_8 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002591 282.0
BYD3_k127_398700_9 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004042 267.0
BYD3_k127_3998811_0 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 321.0
BYD3_k127_3998811_1 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007019 291.0
BYD3_k127_3998811_2 NMT1-like family K15553 - - 0.00000000000000000000000000000000000001542 152.0
BYD3_k127_3998811_3 Amidase K02433,K19837 - 3.5.1.84,6.3.5.6,6.3.5.7 0.000000000003819 71.0
BYD3_k127_4051435_0 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004926 422.0
BYD3_k127_4051435_1 PFAM ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 359.0
BYD3_k127_4051435_10 - - - - 0.00000000000000003124 87.0
BYD3_k127_4051435_2 COG0501 Zn-dependent protease with chaperone function K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 375.0
BYD3_k127_4051435_3 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 338.0
BYD3_k127_4051435_4 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 348.0
BYD3_k127_4051435_5 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 329.0
BYD3_k127_4051435_6 COG0501 Zn-dependent protease with chaperone function - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 327.0
BYD3_k127_4051435_7 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001012 292.0
BYD3_k127_4051435_8 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006267 268.0
BYD3_k127_4051435_9 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008013 256.0
BYD3_k127_4059821_0 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 330.0
BYD3_k127_4059821_1 Exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000006148 139.0
BYD3_k127_4066087_0 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 2.153e-225 702.0
BYD3_k127_4066087_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 575.0
BYD3_k127_4066087_2 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000007656 263.0
BYD3_k127_4066087_3 2OG-Fe(II) oxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000003205 204.0
BYD3_k127_4066087_4 Uncharacterized ACR, COG1678 - - - 0.000000000000000000000002865 110.0
BYD3_k127_4066087_5 Metallo-beta-lactamase superfamily - - - 0.00000004115 64.0
BYD3_k127_4066087_6 EF hand - - - 0.0000168 51.0
BYD3_k127_4130232_0 GTP-binding protein K06207 - - 1.138e-307 951.0
BYD3_k127_4130232_1 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 451.0
BYD3_k127_4130232_2 Belongs to the class I fructose-bisphosphate aldolase family K01623 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005864 400.0
BYD3_k127_4130232_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008738 330.0
BYD3_k127_4130232_4 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000009506 201.0
BYD3_k127_4130232_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000005584 185.0
BYD3_k127_4130232_6 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.00000000000001215 76.0
BYD3_k127_4130232_7 Anti sigma-E protein RseA K03597 - - 0.00001003 51.0
BYD3_k127_41654_0 Ketopantoate hydroxymethyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 505.0
BYD3_k127_41654_1 Fatty acid hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 392.0
BYD3_k127_41654_2 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001742 263.0
BYD3_k127_41654_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000001583 201.0
BYD3_k127_4189043_0 Dihydrodipicolinate synthetase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 500.0
BYD3_k127_4189043_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000794 385.0
BYD3_k127_4230104_0 Bacterial DNA polymerase III alpha subunit K14162 - 2.7.7.7 0.0 1200.0
BYD3_k127_4230104_1 Tripartite tricarboxylate transporter TctA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 616.0
BYD3_k127_4230104_2 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 546.0
BYD3_k127_4230104_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 325.0
BYD3_k127_4230104_4 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 325.0
BYD3_k127_4230104_5 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006058 320.0
BYD3_k127_4230104_6 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002242 287.0
BYD3_k127_4230104_7 surface antigen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001987 262.0
BYD3_k127_4230104_8 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001739 257.0
BYD3_k127_4230104_9 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.000000000000000000000000000000000000000000000001846 181.0
BYD3_k127_4256664_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1666.0
BYD3_k127_4256664_1 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000504 582.0
BYD3_k127_4256664_10 Transposase, Mutator family - - - 0.0001866 50.0
BYD3_k127_4256664_2 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 468.0
BYD3_k127_4256664_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008835 276.0
BYD3_k127_4256664_4 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007638 270.0
BYD3_k127_4256664_5 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000003773 222.0
BYD3_k127_4256664_6 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000003504 220.0
BYD3_k127_4256664_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.000000000000000000000000162 116.0
BYD3_k127_4256664_8 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030312,GO:0030554,GO:0031333,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0044087,GO:0044238,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000001457 59.0
BYD3_k127_4256664_9 - - - - 0.0001618 50.0
BYD3_k127_4264163_0 B12 binding domain K00548 - 2.1.1.13 0.0 1607.0
BYD3_k127_4264163_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1204.0
BYD3_k127_4264163_10 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation - - - 8.454e-197 637.0
BYD3_k127_4264163_11 Protein involved in ribonuclease activity and hydrolase activity K01147 - 3.1.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006702 616.0
BYD3_k127_4264163_12 Mg chelatase subunit ChlI K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 600.0
BYD3_k127_4264163_13 Aminotransferase K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 583.0
BYD3_k127_4264163_14 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 582.0
BYD3_k127_4264163_15 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008535 582.0
BYD3_k127_4264163_16 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 574.0
BYD3_k127_4264163_17 Dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 549.0
BYD3_k127_4264163_18 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000504 511.0
BYD3_k127_4264163_19 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 484.0
BYD3_k127_4264163_2 dna topoisomerase III K03169 - 5.99.1.2 0.0 1121.0
BYD3_k127_4264163_20 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 479.0
BYD3_k127_4264163_21 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 469.0
BYD3_k127_4264163_22 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 448.0
BYD3_k127_4264163_23 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 447.0
BYD3_k127_4264163_24 COG0524 Sugar kinases, ribokinase family K00856 - 2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009283 424.0
BYD3_k127_4264163_25 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 426.0
BYD3_k127_4264163_26 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 407.0
BYD3_k127_4264163_27 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008311 404.0
BYD3_k127_4264163_28 DNA recombination-mediator protein A K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009996 389.0
BYD3_k127_4264163_29 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007181 370.0
BYD3_k127_4264163_3 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 4.28e-297 921.0
BYD3_k127_4264163_30 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 366.0
BYD3_k127_4264163_31 Protocatechuate 3,4-dioxygenase K00449 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412 363.0
BYD3_k127_4264163_32 Aminotransferase class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 353.0
BYD3_k127_4264163_33 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 344.0
BYD3_k127_4264163_34 PFAM Peptidoglycan-binding LysM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 337.0
BYD3_k127_4264163_35 Two component transcriptional regulator, winged helix family K02483,K07663 GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 316.0
BYD3_k127_4264163_36 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 312.0
BYD3_k127_4264163_37 Catalyzes the cycloisomerization of cis,cis-muconate K01857 - 5.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 319.0
BYD3_k127_4264163_38 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 290.0
BYD3_k127_4264163_39 TonB family K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009114 289.0
BYD3_k127_4264163_4 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 1.267e-292 908.0
BYD3_k127_4264163_40 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001083 289.0
BYD3_k127_4264163_41 PFAM fumarylacetoacetate (FAA) hydrolase K16165 - 3.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001325 293.0
BYD3_k127_4264163_42 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006418,GO:0006431,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019752,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008992 286.0
BYD3_k127_4264163_43 AMP-binding enzyme C-terminal domain K04110,K20458 - 6.2.1.25,6.2.1.27,6.2.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004606 294.0
BYD3_k127_4264163_44 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001694 268.0
BYD3_k127_4264163_45 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000009177 264.0
BYD3_k127_4264163_46 TIGRFAM maleylacetoacetate isomerase K01800,K01801 - 5.2.1.2,5.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000001617 260.0
BYD3_k127_4264163_47 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001182 246.0
BYD3_k127_4264163_48 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000001444 249.0
BYD3_k127_4264163_49 Ribosomal protein L11 methyltransferase (PrmA) K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000006884 241.0
BYD3_k127_4264163_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 5.048e-272 852.0
BYD3_k127_4264163_50 Protocatechuate 3,4-dioxygenase K00448 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000000167 232.0
BYD3_k127_4264163_51 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000005278 220.0
BYD3_k127_4264163_52 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000000000000008067 216.0
BYD3_k127_4264163_53 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000001372 205.0
BYD3_k127_4264163_54 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000000000000000000000000000002156 201.0
BYD3_k127_4264163_55 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000000001152 198.0
BYD3_k127_4264163_56 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000000002855 213.0
BYD3_k127_4264163_57 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000000002213 184.0
BYD3_k127_4264163_58 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000009625 183.0
BYD3_k127_4264163_59 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.00000000000000000000000000000000000000000000003544 179.0
BYD3_k127_4264163_6 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.92e-259 806.0
BYD3_k127_4264163_60 Sortase family K07284 - 3.4.22.70 0.0000000000000000000000000000000000000000000001227 176.0
BYD3_k127_4264163_61 Domain of unknown function (DUF4390) - - - 0.0000000000000000000000000000000000000000000008533 174.0
BYD3_k127_4264163_62 Histidine triad (Hit) protein K02503 - - 0.000000000000000000000000000000000000000000005477 168.0
BYD3_k127_4264163_63 - - - - 0.00000000000000000000000000000000000000000669 161.0
BYD3_k127_4264163_64 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000003634 157.0
BYD3_k127_4264163_65 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000001635 140.0
BYD3_k127_4264163_66 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000007946 149.0
BYD3_k127_4264163_67 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000005455 130.0
BYD3_k127_4264163_68 Rubredoxin - - - 0.0000000000000000000000000000000588 124.0
BYD3_k127_4264163_69 Uncharacterised protein family (UPF0227) K07000 - - 0.0000000000000000000000000000002016 133.0
BYD3_k127_4264163_7 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 1.859e-242 754.0
BYD3_k127_4264163_70 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000005357 126.0
BYD3_k127_4264163_71 Protein of unknown function (DUF3426) - - - 0.0000000000000000000000000004411 125.0
BYD3_k127_4264163_72 Thioesterase superfamily - - - 0.000000000000000000000000004219 115.0
BYD3_k127_4264163_73 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.0000000000000000000007511 105.0
BYD3_k127_4264163_74 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000357 103.0
BYD3_k127_4264163_75 Membrane fusogenic activity K09806 - - 0.000000000000000004298 87.0
BYD3_k127_4264163_76 oxidoreductase FAD NAD(P)-binding domain protein K14581 - 1.18.1.7 0.0000000000000001258 84.0
BYD3_k127_4264163_77 Belongs to the UPF0250 family K09158 - - 0.000000000000287 73.0
BYD3_k127_4264163_78 Ribosomal protein L34 - - - 0.00000000002643 64.0
BYD3_k127_4264163_79 ATP synthase I chain K02116 - - 0.000000000385 69.0
BYD3_k127_4264163_8 ammonium transporter K03320 - - 2.948e-210 663.0
BYD3_k127_4264163_80 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000006622 55.0
BYD3_k127_4264163_81 Histidine kinase - - - 0.00001996 56.0
BYD3_k127_4264163_9 Mur ligase family, catalytic domain K02558 - 6.3.2.45 2.008e-202 641.0
BYD3_k127_4274954_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 455.0
BYD3_k127_4274954_1 membrane protein domain - - - 0.0000000000000000000000000000000000000000000000000000000008172 209.0
BYD3_k127_4332470_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 378.0
BYD3_k127_4332470_1 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009464 374.0
BYD3_k127_4332470_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.00000000000000000000000000002707 119.0
BYD3_k127_4332470_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000000003261 103.0
BYD3_k127_4332470_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 351.0
BYD3_k127_4332470_3 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 334.0
BYD3_k127_4332470_4 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006178 280.0
BYD3_k127_4332470_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003614 275.0
BYD3_k127_4332470_6 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000001321 235.0
BYD3_k127_4332470_7 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 GO:0000105,GO:0003674,GO:0003824,GO:0004635,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000000105 200.0
BYD3_k127_4332470_8 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.0000000000000000000000000000000000000000008916 165.0
BYD3_k127_4332470_9 Phosphoribosyl-ATP K01523 - 3.6.1.31 0.000000000000000000000000000000000002677 139.0
BYD3_k127_4333353_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 8.185e-218 686.0
BYD3_k127_4333353_1 enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 347.0
BYD3_k127_4333353_2 Phenylacetic acid degradation protein PaaY K02617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005731 248.0
BYD3_k127_4333353_3 enoyl-CoA hydratase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000002018 239.0
BYD3_k127_4333353_4 PFAM isochorismatase hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000002932 221.0
BYD3_k127_4333353_5 Histidine kinase - - - 0.00000001489 63.0
BYD3_k127_4389237_0 Belongs to the GcvT family K00302 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.5.3.1 0.0 1074.0
BYD3_k127_4389237_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.268e-253 794.0
BYD3_k127_4389237_10 PFAM 4-vinyl reductase, 4VR - - - 0.0000000000000000000000000000000000000000000000000001849 204.0
BYD3_k127_4389237_11 SCO1/SenC K07152 - - 0.000000000000000000000000000000000000000000000001921 176.0
BYD3_k127_4389237_12 Sarcosine oxidase, delta subunit family K00304 - 1.5.3.1 0.00000000000000000000000000000000000005034 143.0
BYD3_k127_4389237_13 Tellurite resistance protein TerB - - - 0.0000000000000000001554 93.0
BYD3_k127_4389237_14 Peptidoglycan-binding domain 1 protein K07273 - - 0.0000000001218 66.0
BYD3_k127_4389237_2 Sarcosine oxidase beta subunit family K00303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.5.3.1 5.361e-221 700.0
BYD3_k127_4389237_3 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 544.0
BYD3_k127_4389237_4 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 480.0
BYD3_k127_4389237_5 Isochorismatase family K09020 - 3.5.1.110 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 381.0
BYD3_k127_4389237_6 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009866 359.0
BYD3_k127_4389237_7 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 344.0
BYD3_k127_4389237_8 COG0410 ABC-type branched-chain amino acid transport systems ATPase component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000228 270.0
BYD3_k127_4389237_9 PFAM ABC transporter related K01995 - - 0.00000000000000000000000000000000000000000000000000000008453 217.0
BYD3_k127_439902_0 Psort location CytoplasmicMembrane, score K01533 - 3.6.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008528 601.0
BYD3_k127_439902_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 433.0
BYD3_k127_439902_2 Protein involved in response to NO K07234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 342.0
BYD3_k127_439902_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005869 283.0
BYD3_k127_439902_4 CoA binding domain K09181 - - 0.000000000000000000000000000000000000003034 151.0
BYD3_k127_439902_5 Cytochrome oxidase maturation protein cbb3-type - - - 0.0000000000001032 72.0
BYD3_k127_4423598_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009313 549.0
BYD3_k127_4423598_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009501 522.0
BYD3_k127_4423598_10 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000004047 248.0
BYD3_k127_4423598_11 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000002435 231.0
BYD3_k127_4423598_12 PFAM Mammalian cell entry related domain protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000000101 218.0
BYD3_k127_4423598_13 MlaC protein K07323 - - 0.00000000000000000000000000000000000000000000000000000000001001 218.0
BYD3_k127_4423598_14 Type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000003489 160.0
BYD3_k127_4423598_15 Belongs to the BolA IbaG family - - - 0.0000000000000000112 94.0
BYD3_k127_4423598_16 STAS domain K07122 - - 0.0000001187 63.0
BYD3_k127_4423598_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005885 411.0
BYD3_k127_4423598_3 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000779 409.0
BYD3_k127_4423598_4 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 397.0
BYD3_k127_4423598_5 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 389.0
BYD3_k127_4423598_6 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 346.0
BYD3_k127_4423598_7 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 338.0
BYD3_k127_4423598_8 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 319.0
BYD3_k127_4423598_9 VacJ family lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000000008831 248.0
BYD3_k127_4461246_0 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components K06147 - - 1.68e-239 757.0
BYD3_k127_4461246_1 AcyL-CoA dehydrogenase K06445 - - 1.76e-210 663.0
BYD3_k127_4461246_2 Histidine-specific methyltransferase, SAM-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 319.0
BYD3_k127_4461246_3 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 293.0
BYD3_k127_4461246_4 Belongs to the peptidase S11 family K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005974 282.0
BYD3_k127_4461246_5 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000001525 222.0
BYD3_k127_4538280_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1195.0
BYD3_k127_4538280_1 ribonuclease, Rne Rng family K08301 - - 6.244e-224 702.0
BYD3_k127_4538280_10 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007687 281.0
BYD3_k127_4538280_11 PFAM Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000007707 274.0
BYD3_k127_4538280_12 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000008018 214.0
BYD3_k127_4538280_13 Protein of unknown function (DUF3015) - - - 0.000000000000000000000000000000000000000000000000007174 184.0
BYD3_k127_4538280_14 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000008973 152.0
BYD3_k127_4538280_15 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000001534 153.0
BYD3_k127_4538280_16 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.000000000000000000000000000000000001292 143.0
BYD3_k127_4538280_17 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000337 101.0
BYD3_k127_4538280_18 PFAM cytochrome c, class I - - - 0.0000001618 57.0
BYD3_k127_4538280_2 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 592.0
BYD3_k127_4538280_3 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007214 548.0
BYD3_k127_4538280_4 Domain of unknown function (DUF4105) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008356 530.0
BYD3_k127_4538280_5 Flavin containing amine oxidoreductase K02293 - 1.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009314 518.0
BYD3_k127_4538280_6 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 440.0
BYD3_k127_4538280_7 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 428.0
BYD3_k127_4538280_8 Prolyl oligopeptidase family K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005684 291.0
BYD3_k127_4538280_9 Prolyl oligopeptidase family K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000132 286.0
BYD3_k127_4562559_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 499.0
BYD3_k127_4562559_1 Superfamily I DNA and RNA helicases K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 288.0
BYD3_k127_4565415_0 Extracellular ligand-binding receptor K01999 - - 2.631e-199 643.0
BYD3_k127_4565415_1 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 614.0
BYD3_k127_4565415_10 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002035 252.0
BYD3_k127_4565415_11 Sugar isomerase (SIS) - - - 0.0000000000000000000000000000000000000000000000000000000000000004848 231.0
BYD3_k127_4565415_12 KR domain - - - 0.00000000000000000000000000000000000000000000000000000001852 211.0
BYD3_k127_4565415_13 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01995 - - 0.0000000000000000000000000000000000000000000000000000004477 203.0
BYD3_k127_4565415_14 Transcriptional regulator - - - 0.0000000000000000000000001617 107.0
BYD3_k127_4565415_15 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000001666 116.0
BYD3_k127_4565415_2 Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009613 542.0
BYD3_k127_4565415_3 Luciferase-like monooxygenase K14733 - 1.14.13.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004786 541.0
BYD3_k127_4565415_4 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 498.0
BYD3_k127_4565415_5 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 412.0
BYD3_k127_4565415_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003865 409.0
BYD3_k127_4565415_7 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 320.0
BYD3_k127_4565415_8 PFAM 6-phosphogluconate dehydrogenase NAD-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 310.0
BYD3_k127_4565415_9 NAD dependent epimerase/dehydratase family K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 288.0
BYD3_k127_4618021_0 Lactonase, 7-bladed beta-propeller K07404 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 336.0
BYD3_k127_4618021_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004794 287.0
BYD3_k127_4618021_2 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000004729 238.0
BYD3_k127_4618021_3 glyoxalase bleomycin resistance protein - - - 0.0000000000000000000000000000000000000000000000004562 178.0
BYD3_k127_4618021_4 PFAM NLP P60 protein - - - 0.000000000000000000000000000001638 126.0
BYD3_k127_4618021_5 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000001509 119.0
BYD3_k127_4618021_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000343 119.0
BYD3_k127_4618021_7 GCN5-related N-acetyl-transferase K06975 - - 0.000000000000000000000000009148 111.0
BYD3_k127_4618021_8 Protein conserved in bacteria K07793 - - 0.00004249 47.0
BYD3_k127_4729130_0 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 373.0
BYD3_k127_4729130_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 366.0
BYD3_k127_4729130_2 Universal stress protein family - - - 0.00000000000000002458 87.0
BYD3_k127_4764061_0 glucose sorbosone K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004293 494.0
BYD3_k127_4764061_1 ATP-independent chaperone mediated protein folding - - - 0.00000000000000000002094 97.0
BYD3_k127_4881449_0 Belongs to the transketolase family K00615 - 2.2.1.1 5.979e-199 638.0
BYD3_k127_4881449_1 NADH pyrophosphatase-like rudimentary NUDIX domain K03426 - 3.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000675 280.0
BYD3_k127_4881449_2 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.0000003161 54.0
BYD3_k127_4885993_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 1.267e-239 752.0
BYD3_k127_4885993_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 379.0
BYD3_k127_4898533_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1229.0
BYD3_k127_4898533_1 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.186e-321 997.0
BYD3_k127_4898533_10 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 304.0
BYD3_k127_4898533_11 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 309.0
BYD3_k127_4898533_12 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007283 273.0
BYD3_k127_4898533_13 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001944 277.0
BYD3_k127_4898533_14 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006788 273.0
BYD3_k127_4898533_15 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000007146 239.0
BYD3_k127_4898533_16 Adenosyltransferase K00798 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000001066 239.0
BYD3_k127_4898533_17 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000006685 226.0
BYD3_k127_4898533_18 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000006943 216.0
BYD3_k127_4898533_19 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000001714 191.0
BYD3_k127_4898533_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 1.166e-285 893.0
BYD3_k127_4898533_20 oxidation-reduction process - - - 0.0000000000000000000000000000000000000000002492 161.0
BYD3_k127_4898533_21 - - - - 0.0000000000000000000000000000000000000000008043 169.0
BYD3_k127_4898533_22 Shikimate kinase K00851 - 2.7.1.12 0.0000000000000000000000000000000000000001283 166.0
BYD3_k127_4898533_23 Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000000000000000000000000111 158.0
BYD3_k127_4898533_24 Protein conserved in bacteria K09931 - - 0.00000000000000000000000000000000000006607 151.0
BYD3_k127_4898533_25 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000003617 140.0
BYD3_k127_4898533_26 - - - - 0.0000000000000000000000000000000001084 150.0
BYD3_k127_4898533_27 - - - - 0.0000000000000000000000000000003355 126.0
BYD3_k127_4898533_28 - - - - 0.00000000000000000000000000001654 119.0
BYD3_k127_4898533_29 - - - - 0.000000000000000000000000004534 117.0
BYD3_k127_4898533_3 protein conserved in bacteria K07793 - - 1.281e-228 717.0
BYD3_k127_4898533_30 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000001021 101.0
BYD3_k127_4898533_31 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000009977 108.0
BYD3_k127_4898533_32 CHASE - - - 0.0000000000000002845 88.0
BYD3_k127_4898533_33 helix_turn_helix, Lux Regulon K07684,K07693 - - 0.00000000008473 64.0
BYD3_k127_4898533_4 Bacterial transcriptional activator domain - - - 1.935e-196 649.0
BYD3_k127_4898533_5 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 534.0
BYD3_k127_4898533_6 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 535.0
BYD3_k127_4898533_7 PFAM ATPase family associated with various cellular activities (AAA) K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 406.0
BYD3_k127_4898533_8 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007547 405.0
BYD3_k127_4898533_9 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 344.0
BYD3_k127_4918040_0 Mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 521.0
BYD3_k127_4918040_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 468.0
BYD3_k127_4918040_2 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000008505 232.0
BYD3_k127_4918040_3 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000002912 189.0
BYD3_k127_4924877_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 1.559e-217 698.0
BYD3_k127_4924877_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 1.943e-212 673.0
BYD3_k127_4924877_10 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 456.0
BYD3_k127_4924877_11 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 460.0
BYD3_k127_4924877_12 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 439.0
BYD3_k127_4924877_13 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005445 437.0
BYD3_k127_4924877_14 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 406.0
BYD3_k127_4924877_15 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 409.0
BYD3_k127_4924877_16 Transporter associated domain K06189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 379.0
BYD3_k127_4924877_17 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 367.0
BYD3_k127_4924877_18 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 347.0
BYD3_k127_4924877_19 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008879 284.0
BYD3_k127_4924877_2 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 1.099e-200 634.0
BYD3_k127_4924877_20 enzyme of heme biosynthesis K02496,K13543 - 2.1.1.107,4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008333 278.0
BYD3_k127_4924877_21 Fructosamine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004316 269.0
BYD3_k127_4924877_22 LytTr DNA-binding domain K08083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001571 272.0
BYD3_k127_4924877_23 enzyme of heme biosynthesis K02498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002147 273.0
BYD3_k127_4924877_24 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000009937 262.0
BYD3_k127_4924877_25 alginate biosynthesis protein AlgZ FimS K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000002581 267.0
BYD3_k127_4924877_26 Nucleotidyl transferase K00992 - 2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000156 253.0
BYD3_k127_4924877_27 FAD binding domain K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000001151 243.0
BYD3_k127_4924877_28 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000004244 235.0
BYD3_k127_4924877_29 Polynucleotide kinase 3 phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000000000000000000000003494 239.0
BYD3_k127_4924877_3 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 606.0
BYD3_k127_4924877_30 synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000003062 201.0
BYD3_k127_4924877_31 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000002911 186.0
BYD3_k127_4924877_32 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000001026 181.0
BYD3_k127_4924877_33 Glutaredoxin K07390 - - 0.0000000000000000000000000000000000000000000001676 169.0
BYD3_k127_4924877_34 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000000000000008463 168.0
BYD3_k127_4924877_35 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000005074 148.0
BYD3_k127_4924877_36 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000001673 139.0
BYD3_k127_4924877_37 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000009065 104.0
BYD3_k127_4924877_38 Belongs to the transcriptional regulatory Fis family K03557 - - 0.0000000000000000000003872 97.0
BYD3_k127_4924877_4 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 607.0
BYD3_k127_4924877_5 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 567.0
BYD3_k127_4924877_6 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 505.0
BYD3_k127_4924877_7 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007222 484.0
BYD3_k127_4924877_8 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 484.0
BYD3_k127_4924877_9 phosphate starvation-inducible protein PhoH K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 463.0
BYD3_k127_4998107_0 Patatin phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 462.0
BYD3_k127_4998107_1 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000003845 236.0
BYD3_k127_4998107_2 PFAM MaoC domain protein dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000001869 234.0
BYD3_k127_5029429_0 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000003292 239.0
BYD3_k127_5057773_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 3.244e-236 741.0
BYD3_k127_5057773_1 alpha beta hydrolase fold K03821 - - 1.884e-223 711.0
BYD3_k127_5057773_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000002031 142.0
BYD3_k127_5057773_3 - - - - 0.00000000000000000000001111 103.0
BYD3_k127_5057773_4 Universal stress protein - - - 0.000000273 57.0
BYD3_k127_5098816_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 3.06e-284 880.0
BYD3_k127_5098816_1 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 5.475e-229 717.0
BYD3_k127_5098816_10 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 370.0
BYD3_k127_5098816_11 oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 362.0
BYD3_k127_5098816_12 Fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 347.0
BYD3_k127_5098816_13 RNA polymerase sigma factor, sigma-70 family K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 343.0
BYD3_k127_5098816_14 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005132 335.0
BYD3_k127_5098816_15 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 327.0
BYD3_k127_5098816_16 GHMP kinases N terminal domain K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 295.0
BYD3_k127_5098816_17 ABC transporter K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 290.0
BYD3_k127_5098816_18 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001275 249.0
BYD3_k127_5098816_19 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000008963 240.0
BYD3_k127_5098816_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 507.0
BYD3_k127_5098816_20 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000000476 235.0
BYD3_k127_5098816_21 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000000000002836 227.0
BYD3_k127_5098816_22 oxidase assembly K02258 - - 0.0000000000000000000000000000000000000000000000000000000000000005896 229.0
BYD3_k127_5098816_23 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000009134 224.0
BYD3_k127_5098816_24 Involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000002192 213.0
BYD3_k127_5098816_25 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000002917 204.0
BYD3_k127_5098816_26 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000002118 199.0
BYD3_k127_5098816_27 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000000006571 188.0
BYD3_k127_5098816_28 RNA methyltransferase, RsmD family - - - 0.000000000000000000000000000000000000000000000000002169 190.0
BYD3_k127_5098816_29 SURF1-like protein K14998 - - 0.000000000000000000000000000000000000000000003853 170.0
BYD3_k127_5098816_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 502.0
BYD3_k127_5098816_30 signal sequence binding - - - 0.00000000000000000000000000000000000000003065 161.0
BYD3_k127_5098816_31 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000006881 137.0
BYD3_k127_5098816_32 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000000000000000000000001248 123.0
BYD3_k127_5098816_33 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000001487 134.0
BYD3_k127_5098816_34 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.00000000000000000000008294 110.0
BYD3_k127_5098816_35 Integral membrane protein (DUF2244) - - - 0.00000000000000000004228 99.0
BYD3_k127_5098816_36 Protein of unknown function (DUF2909) - - - 0.000002563 57.0
BYD3_k127_5098816_4 SMART Tetratricopeptide domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 477.0
BYD3_k127_5098816_5 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003617 456.0
BYD3_k127_5098816_6 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 429.0
BYD3_k127_5098816_7 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005051 394.0
BYD3_k127_5098816_8 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 394.0
BYD3_k127_5098816_9 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 391.0
BYD3_k127_5212948_0 AMP-binding enzyme K12508 - 6.2.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003652 585.0
BYD3_k127_5212948_1 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004849 503.0
BYD3_k127_5212948_10 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 329.0
BYD3_k127_5212948_11 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 325.0
BYD3_k127_5212948_12 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 299.0
BYD3_k127_5212948_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004236 273.0
BYD3_k127_5212948_14 asparaginase K13051 - 3.4.19.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000007332 283.0
BYD3_k127_5212948_15 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003762 263.0
BYD3_k127_5212948_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000933 258.0
BYD3_k127_5212948_17 Dioxygenase - - - 0.000000000000000000000000000000000000000000000000000663 194.0
BYD3_k127_5212948_18 Domain of unknown function (DUF4112) - - - 0.0000000000000000000000000000000000000004045 154.0
BYD3_k127_5212948_19 Protein of unknown function (DUF3750) - - - 0.000000000000000000000000000000000001092 148.0
BYD3_k127_5212948_2 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009712 488.0
BYD3_k127_5212948_21 (Hpt) domain - - - 0.0000001111 59.0
BYD3_k127_5212948_3 PFAM Transketolase central region K00162,K21417 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 436.0
BYD3_k127_5212948_4 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 416.0
BYD3_k127_5212948_5 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 398.0
BYD3_k127_5212948_6 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008649 392.0
BYD3_k127_5212948_7 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007335 382.0
BYD3_k127_5212948_8 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 355.0
BYD3_k127_5212948_9 Dehydrogenase E1 component K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006047 344.0
BYD3_k127_5235164_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 4.254e-276 874.0
BYD3_k127_5235164_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000006253 129.0
BYD3_k127_5235164_2 signal peptide protein - - - 0.000000000002365 68.0
BYD3_k127_5237894_0 Amidohydrolase K07045 - - 6.571e-210 668.0
BYD3_k127_5237894_1 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003326 355.0
BYD3_k127_5237894_2 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000787 271.0
BYD3_k127_5237894_3 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000001104 201.0
BYD3_k127_5352770_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 8.259e-197 625.0
BYD3_k127_5352770_1 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 491.0
BYD3_k127_5352770_2 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007266 477.0
BYD3_k127_5352770_3 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 428.0
BYD3_k127_5352770_4 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 388.0
BYD3_k127_5352770_5 Family of unknown function (DUF1028) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001176 277.0
BYD3_k127_5352770_6 Universal stress protein family - - - 0.000000000000008827 83.0
BYD3_k127_5352770_7 Universal stress protein family - - - 0.000000000005629 73.0
BYD3_k127_5352770_8 membrane protein TerC - - - 0.000007225 49.0
BYD3_k127_5378305_0 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009192 374.0
BYD3_k127_5378305_1 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.0000000000000000000000000000000001919 146.0
BYD3_k127_5378305_2 PFAM FAD dependent oxidoreductase K00285 - 1.4.5.1 0.000000000000000000001298 94.0
BYD3_k127_5378305_3 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000001473 100.0
BYD3_k127_5415428_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 3.143e-245 771.0
BYD3_k127_5415428_1 Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family K03455 - - 7.999e-199 638.0
BYD3_k127_5415428_10 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000000000000000000000000000000005052 193.0
BYD3_k127_5415428_11 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000001767 196.0
BYD3_k127_5415428_12 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000003701 183.0
BYD3_k127_5415428_14 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000000000000004789 157.0
BYD3_k127_5415428_15 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.000000000000000000000000000000000008104 148.0
BYD3_k127_5415428_16 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.0000000000000000000000000005279 124.0
BYD3_k127_5415428_17 Type II and III secretion system protein K02453 - - 0.000000000000000000000000001725 115.0
BYD3_k127_5415428_18 general secretion pathway protein - - - 0.000000000000000002238 99.0
BYD3_k127_5415428_19 - - - - 0.00000000000000001536 91.0
BYD3_k127_5415428_2 type II secretion system protein K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009917 513.0
BYD3_k127_5415428_20 Prokaryotic N-terminal methylation motif - - - 0.000000000000007394 83.0
BYD3_k127_5415428_21 - - - - 0.00000000000006164 81.0
BYD3_k127_5415428_22 - - - - 0.000000000009129 78.0
BYD3_k127_5415428_3 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 419.0
BYD3_k127_5415428_4 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005899 398.0
BYD3_k127_5415428_5 ABC-type (Unclassified) transport system, ATPase component K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 336.0
BYD3_k127_5415428_6 Type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000484 261.0
BYD3_k127_5415428_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000001375 234.0
BYD3_k127_5415428_8 - - - - 0.0000000000000000000000000000000000000000000000000000000001505 220.0
BYD3_k127_5415428_9 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000000000000000000000000000009471 197.0
BYD3_k127_5429642_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 1.5e-323 1013.0
BYD3_k127_5429642_1 KaiC K08482 - - 9.83e-208 655.0
BYD3_k127_5429642_10 Enoyl-CoA hydratase/isomerase K13766,K13779 - 4.2.1.18,4.2.1.57 0.00000000000000000000000000000000000000000000000000000000005849 207.0
BYD3_k127_5429642_11 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000000001077 202.0
BYD3_k127_5429642_12 - - - - 0.0000000000000000000000000000000000000000000000000000004295 203.0
BYD3_k127_5429642_13 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000001575 144.0
BYD3_k127_5429642_14 (Lipo)protein - - - 0.00000000000003624 79.0
BYD3_k127_5429642_15 electron transfer activity - - - 0.0000000005569 61.0
BYD3_k127_5429642_2 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 530.0
BYD3_k127_5429642_3 two-component system sensor protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 470.0
BYD3_k127_5429642_4 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 467.0
BYD3_k127_5429642_5 phosphatidate phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005925 455.0
BYD3_k127_5429642_6 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 388.0
BYD3_k127_5429642_7 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004369 296.0
BYD3_k127_5429642_8 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001088 273.0
BYD3_k127_5429642_9 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000000000000000000000000000000003286 237.0
BYD3_k127_5537550_0 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 605.0
BYD3_k127_5537550_1 Belongs to the Dps family - - - 0.000000000000000000000000000000000000000000000000000003091 198.0
BYD3_k127_5559946_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 4.071e-258 801.0
BYD3_k127_5559946_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 5.829e-219 699.0
BYD3_k127_5559946_10 TPR repeat - - - 0.000000000000000000000000006264 116.0
BYD3_k127_5559946_11 - - - - 0.000000000000000006231 90.0
BYD3_k127_5559946_12 helix_turn_helix, Lux Regulon - - - 0.000000001462 64.0
BYD3_k127_5559946_13 Chorismate mutase K00014,K00891,K04092,K04516 - 1.1.1.25,2.7.1.71,5.4.99.5 0.0001416 44.0
BYD3_k127_5559946_14 SapC - - - 0.0006046 45.0
BYD3_k127_5559946_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009967 554.0
BYD3_k127_5559946_3 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 398.0
BYD3_k127_5559946_4 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006127 349.0
BYD3_k127_5559946_5 Uncharacterised MFS-type transporter YbfB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001298 271.0
BYD3_k127_5559946_6 luxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009286 258.0
BYD3_k127_5559946_7 Histidine kinase K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000004747 232.0
BYD3_k127_5559946_8 endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000004706 169.0
BYD3_k127_5559946_9 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000000002829 165.0
BYD3_k127_5577799_0 Histidine Phosphotransfer domain K10715 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 529.0
BYD3_k127_5577799_1 HD domain K13815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 417.0
BYD3_k127_5577799_2 Pfam Enoyl-CoA hydratase isomerase K13816 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000823 304.0
BYD3_k127_5577799_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 294.0
BYD3_k127_5577799_4 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001937 276.0
BYD3_k127_5577799_5 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000001651 216.0
BYD3_k127_5577799_6 protein conserved in bacteria K09922 - - 0.00000002969 55.0
BYD3_k127_5589921_0 glutamate synthase, alpha subunit domain protein K00265 - 1.4.1.13,1.4.1.14 0.0 1467.0
BYD3_k127_5589921_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 2.885e-271 848.0
BYD3_k127_5589921_2 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 1.874e-244 764.0
BYD3_k127_5589921_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 558.0
BYD3_k127_5589921_4 ABC-type sugar transport system, periplasmic component K05813 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005741 419.0
BYD3_k127_5589921_5 MgtC family K07507 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001756 274.0
BYD3_k127_5589921_6 Protein of unknown function (DUF2891) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002344 268.0
BYD3_k127_5605106_0 haloacid dehalogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003786 238.0
BYD3_k127_5605106_1 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000004198 195.0
BYD3_k127_5605106_2 transcriptional regulator - - - 0.00000000000000000000000000000000000000000134 163.0
BYD3_k127_5622433_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.268e-244 762.0
BYD3_k127_5622433_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 399.0
BYD3_k127_5622433_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000001758 173.0
BYD3_k127_5622433_3 Domain of unknown function (DUF4845) - - - 0.00000000002756 68.0
BYD3_k127_5638280_0 Na H antiporter MnhB subunit-related protein K05559 - - 0.0 1364.0
BYD3_k127_5638280_1 NADH Ubiquinone plastoquinone (Complex I) K05561 - - 4.786e-196 634.0
BYD3_k127_5638280_10 ChrR Cupin-like domain - - - 0.00000000000000000000000000000000000001068 152.0
BYD3_k127_5638280_11 COG2212 Multisubunit Na H antiporter, MnhF subunit K05563 - - 0.000000000000000000000000000001338 122.0
BYD3_k127_5638280_12 PFAM Na H antiporter subunit K05564 - - 0.00000000000000000000000000001831 129.0
BYD3_k127_5638280_13 DoxX family K15977 - - 0.0000000000000000000000000111 110.0
BYD3_k127_5638280_14 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000006507 101.0
BYD3_k127_5638280_15 Cytochrome c - - - 0.00000000000000001273 83.0
BYD3_k127_5638280_16 LysR substrate binding domain - - - 0.0000003267 55.0
BYD3_k127_5638280_17 DoxX K15977 - - 0.00001602 51.0
BYD3_k127_5638280_18 PFAM NADPH-dependent FMN reductase K19784 - - 0.00008661 46.0
BYD3_k127_5638280_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520,K21739 - 1.16.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 614.0
BYD3_k127_5638280_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004573 398.0
BYD3_k127_5638280_4 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006068 272.0
BYD3_k127_5638280_5 Carbamoyl-phosphate synthase L chain, ATP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000001616 228.0
BYD3_k127_5638280_6 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000007657 209.0
BYD3_k127_5638280_7 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000004976 195.0
BYD3_k127_5638280_8 antiporter K05562 - - 0.0000000000000000000000000000000000000000000000006078 196.0
BYD3_k127_5638280_9 PFAM NADH-ubiquinone oxidoreductase chain 4L K05560 - - 0.00000000000000000000000000000000000000000000000747 175.0
BYD3_k127_5651811_0 benzoyl-CoA oxygenase K15512 - 1.14.13.208 7.079e-245 762.0
BYD3_k127_5651811_1 enoyl-CoA hydratase K15513 - 4.1.2.44 8.009e-227 718.0
BYD3_k127_5651811_10 Twin-arginine translocation pathway signal sequence - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006143 431.0
BYD3_k127_5651811_11 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 396.0
BYD3_k127_5651811_12 Succinylglutamate desuccinylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 352.0
BYD3_k127_5651811_13 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 341.0
BYD3_k127_5651811_14 mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 293.0
BYD3_k127_5651811_15 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 288.0
BYD3_k127_5651811_16 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007359 287.0
BYD3_k127_5651811_17 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004509 259.0
BYD3_k127_5651811_18 peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000002196 262.0
BYD3_k127_5651811_19 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002716 240.0
BYD3_k127_5651811_2 AMP-binding enzyme K12508 - 6.2.1.34 3.9e-221 708.0
BYD3_k127_5651811_20 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000163 238.0
BYD3_k127_5651811_21 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000004379 218.0
BYD3_k127_5651811_22 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000004802 230.0
BYD3_k127_5651811_23 - K11477 - - 0.00000000000000000000000000000000000000000000000000005283 190.0
BYD3_k127_5651811_24 Flavodoxin - - - 0.00000000000000000000000000000000000000000000000000195 186.0
BYD3_k127_5651811_25 - - - - 0.0000000000000000000000000000000000000000157 161.0
BYD3_k127_5651811_26 EamA-like transporter family - - - 0.000000000000000000000000000000000000002665 158.0
BYD3_k127_5651811_27 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000001701 154.0
BYD3_k127_5651811_28 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000000000007307 145.0
BYD3_k127_5651811_29 Belongs to the BolA IbaG family K05527 - - 0.000000000000000000000000008408 112.0
BYD3_k127_5651811_3 ABC-type dipeptide transport system periplasmic component K02035 - - 1.739e-218 689.0
BYD3_k127_5651811_30 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000003828 102.0
BYD3_k127_5651811_31 - - - - 0.00000000000001318 75.0
BYD3_k127_5651811_32 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000001177 62.0
BYD3_k127_5651811_33 2-Nitropropane dioxygenase - - - 0.0000000002504 70.0
BYD3_k127_5651811_34 Helix-turn-helix XRE-family like proteins - - - 0.00000000146 68.0
BYD3_k127_5651811_35 - - - - 0.0001219 48.0
BYD3_k127_5651811_36 Domain of unknown function (DUF1850) - - - 0.0001959 47.0
BYD3_k127_5651811_4 AsmA family K07289,K07290 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 531.0
BYD3_k127_5651811_5 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 491.0
BYD3_k127_5651811_6 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000645 484.0
BYD3_k127_5651811_7 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 472.0
BYD3_k127_5651811_8 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007628 462.0
BYD3_k127_5651811_9 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 430.0
BYD3_k127_5656123_0 Succinyl-CoA ligase like flavodoxin domain - - - 0.0 1229.0
BYD3_k127_5656123_1 ATP citrate lyase citrate-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000909 539.0
BYD3_k127_5656123_2 PFAM amine oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004791 301.0
BYD3_k127_5696968_0 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000223 282.0
BYD3_k127_5696968_1 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000004725 235.0
BYD3_k127_5696968_2 COG1247 Sortase and related acyltransferases K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000000001347 216.0
BYD3_k127_5696968_3 catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water K01495 - 3.5.4.16 0.000000000000000000000000000000153 125.0
BYD3_k127_5696968_4 - - - - 0.0000000006291 61.0
BYD3_k127_5697469_0 Dehydratase family K13875 - 4.2.1.25 1.429e-298 922.0
BYD3_k127_5697469_1 PFAM D-galactarate dehydratase Altronate hydrolase domain protein K01685,K01708,K16846 - 4.2.1.42,4.2.1.7,4.4.1.24 3.124e-221 699.0
BYD3_k127_5697469_2 Enoyl-(Acyl carrier protein) reductase K21883 - 1.1.1.401 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 308.0
BYD3_k127_5697469_3 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000002317 259.0
BYD3_k127_5697469_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000003741 234.0
BYD3_k127_5697469_5 RNA methyltransferase K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000002046 226.0
BYD3_k127_5697469_6 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000000000000000000000000000000000002967 197.0
BYD3_k127_5697469_7 Enoyl-(Acyl carrier protein) reductase K18335 - - 0.000000000000000000000002838 104.0
BYD3_k127_5697469_8 Domain of unknown function (DUF2382) - - - 0.00000000000000000000271 98.0
BYD3_k127_5732158_0 phosphonate metabolism K06164 - 2.7.8.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 527.0
BYD3_k127_5732158_1 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 494.0
BYD3_k127_5732158_10 Protein of unknown function (DUF1045) - - - 0.000000000000000000000000000000000000000000000000000005677 215.0
BYD3_k127_5732158_11 low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000002761 192.0
BYD3_k127_5732158_12 TIGRFAM phosphonate degradation operons associated HDIG domain protein K21196 - 1.13.11.78 0.0000000000000000000000000000000000000000000001147 192.0
BYD3_k127_5732158_13 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000008833 175.0
BYD3_k127_5732158_14 Acid phosphatase homologues K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000001678 169.0
BYD3_k127_5732158_15 phosphonate C-P lyase system protein PhnH K06165 - 2.7.8.37 0.000000000000000000000000000000000000000001338 172.0
BYD3_k127_5732158_16 Zinc dependent phospholipase C - - - 0.0000000000000000000000000000000000000000105 171.0
BYD3_k127_5732158_17 Phosphonate C-P lyase system protein PhnG K06166 - 2.7.8.37 0.000000000000000000000000000000000000002213 151.0
BYD3_k127_5732158_18 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000000000000000000000000000001199 151.0
BYD3_k127_5732158_19 membrane - - - 0.0000000000000000000000463 100.0
BYD3_k127_5732158_2 Catalyzes the breakage of the C-P bond in alpha-D-ribose 1-methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose K06163 - 4.7.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 491.0
BYD3_k127_5732158_3 TIGRFAM phosphonate metabolism protein PhnM K06162 - 3.6.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004709 471.0
BYD3_k127_5732158_4 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008903 418.0
BYD3_k127_5732158_5 ABC transporter permease K02042 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 400.0
BYD3_k127_5732158_6 phosphonate C-P lyase system protein PhnK K05781 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009003 386.0
BYD3_k127_5732158_7 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 359.0
BYD3_k127_5732158_8 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 342.0
BYD3_k127_5732158_9 ATPases associated with a variety of cellular activities K05780 GO:0005575,GO:0006793,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0019634,GO:0019637,GO:0019700,GO:0032991,GO:0044237,GO:0046434,GO:0061694,GO:0061695,GO:0071704,GO:1901575,GO:1902494,GO:1990234 2.7.8.37 0.00000000000000000000000000000000000000000000000000000000000000000002407 251.0
BYD3_k127_5739854_0 acetyl-coa acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 558.0
BYD3_k127_5739854_1 AMP-binding enzyme C-terminal domain K02182 - 6.2.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 494.0
BYD3_k127_5760009_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.899e-213 683.0
BYD3_k127_5760009_1 Arginyl-tRNA synthetase K01887 - 6.1.1.19 4.06e-213 674.0
BYD3_k127_5760009_10 PFAM Sporulation domain protein - - - 0.0000000000000000000000000000000000000001437 163.0
BYD3_k127_5760009_11 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000000000000411 122.0
BYD3_k127_5760009_12 Thiol disulfide interchange protein K03673 - - 0.0000000000000000000003295 107.0
BYD3_k127_5760009_13 - - - - 0.000000000000004399 76.0
BYD3_k127_5760009_2 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 3.287e-201 643.0
BYD3_k127_5760009_3 TonB dependent receptor K02014 - - 5.522e-200 644.0
BYD3_k127_5760009_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 467.0
BYD3_k127_5760009_5 PFAM glycosyl transferase family 9 K02849 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 431.0
BYD3_k127_5760009_6 Glycosyltransferase Family 4 K02844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 367.0
BYD3_k127_5760009_7 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 361.0
BYD3_k127_5760009_8 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004841 284.0
BYD3_k127_5760009_9 EVE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002975 229.0
BYD3_k127_5763089_0 Transporter, hydrophobe amphiphile efflux-1 (HAE1) family K18902 - - 5.393e-240 748.0
BYD3_k127_5763089_1 Outer membrane efflux protein K18903 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008223 319.0
BYD3_k127_5786414_0 Amidohydrolase K03392,K10220 - 4.1.1.45,4.2.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 384.0
BYD3_k127_5786414_1 EF hand - - - 0.0001792 48.0
BYD3_k127_58190_0 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1722.0
BYD3_k127_58190_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1427.0
BYD3_k127_58190_10 PFAM ABC transporter K02471 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 586.0
BYD3_k127_58190_11 glycolate oxidase subunit GlcD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008188 524.0
BYD3_k127_58190_12 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 457.0
BYD3_k127_58190_13 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 414.0
BYD3_k127_58190_14 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 396.0
BYD3_k127_58190_15 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006721 394.0
BYD3_k127_58190_16 Zinc-binding dehydrogenase K12957,K13953,K19961 - 1.1.1.1,1.1.1.258 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 381.0
BYD3_k127_58190_17 PFAM ABC transporter related K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004684 370.0
BYD3_k127_58190_18 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000707 366.0
BYD3_k127_58190_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 365.0
BYD3_k127_58190_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1029.0
BYD3_k127_58190_20 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 315.0
BYD3_k127_58190_21 Endonuclease Exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 303.0
BYD3_k127_58190_22 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 311.0
BYD3_k127_58190_23 zinc protease protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 298.0
BYD3_k127_58190_24 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000178 289.0
BYD3_k127_58190_25 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000648 282.0
BYD3_k127_58190_26 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002346 284.0
BYD3_k127_58190_27 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007288 284.0
BYD3_k127_58190_28 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005132 288.0
BYD3_k127_58190_29 alpha/beta hydrolase fold K01066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003689 279.0
BYD3_k127_58190_3 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 3.413e-296 939.0
BYD3_k127_58190_30 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002431 258.0
BYD3_k127_58190_31 Mo-co oxidoreductase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001361 249.0
BYD3_k127_58190_32 CoA-binding protein K06929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004775 241.0
BYD3_k127_58190_33 Glutathione S-Transferase K00799 GO:0003674,GO:0003824,GO:0004364,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016740,GO:0016765,GO:0030611,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0055114 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000441 240.0
BYD3_k127_58190_34 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000002244 226.0
BYD3_k127_58190_35 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000002298 209.0
BYD3_k127_58190_36 2-phosphosulfolactate phosphatase activity K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.000000000000000000000000000000000000000000000000000000001083 209.0
BYD3_k127_58190_37 regulatory - - - 0.00000000000000000000000000000000000000000000000000000162 202.0
BYD3_k127_58190_38 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000378 200.0
BYD3_k127_58190_39 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000000000000000005763 194.0
BYD3_k127_58190_4 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.865e-270 845.0
BYD3_k127_58190_40 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000005625 180.0
BYD3_k127_58190_41 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000008689 164.0
BYD3_k127_58190_42 NIPSNAP - - - 0.0000000000000000000000000000000000000000004829 159.0
BYD3_k127_58190_43 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000001768 161.0
BYD3_k127_58190_44 Protein of unknown function (DUF2946) - - - 0.0000000000000000000000000000000000000002034 155.0
BYD3_k127_58190_45 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000007227 146.0
BYD3_k127_58190_46 Redoxin domain protein - - - 0.0000000000000000000000000000000002178 145.0
BYD3_k127_58190_47 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000004367 144.0
BYD3_k127_58190_48 Phospholipase Carboxylesterase K06999 GO:0003674,GO:0003824,GO:0016787,GO:0016788,GO:0052689 - 0.0000000000000000000000000000000006873 139.0
BYD3_k127_58190_49 Ribonuclease K01167 - 3.1.27.3 0.00000000000000000000000000000001968 129.0
BYD3_k127_58190_5 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 1.994e-249 785.0
BYD3_k127_58190_50 Fe-S protein K07140 - - 0.0000000000000000000000000000000226 140.0
BYD3_k127_58190_51 Thioesterase superfamily - - - 0.0000000000000000000000000000001009 130.0
BYD3_k127_58190_52 CbiX K03795 - 4.99.1.3 0.00000000000000000000000000005168 125.0
BYD3_k127_58190_53 Regulatory protein, FmdB family - - - 0.0000000000000000000000321 109.0
BYD3_k127_58190_54 Receptor family ligand binding region K01999 - - 0.000000000000000001506 98.0
BYD3_k127_58190_55 (barnase) inhibitor - - - 0.00000000000000003236 88.0
BYD3_k127_58190_6 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 1.806e-245 767.0
BYD3_k127_58190_7 Belongs to the TPP enzyme family K01652 - 2.2.1.6 3.285e-223 709.0
BYD3_k127_58190_8 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 4.056e-222 701.0
BYD3_k127_58190_9 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 1.102e-205 646.0
BYD3_k127_5823272_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 5.413e-251 806.0
BYD3_k127_5823272_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.2e-238 744.0
BYD3_k127_5823272_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 572.0
BYD3_k127_5823272_3 Zn-dependent protease with chaperone function K07387 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 329.0
BYD3_k127_5823272_4 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.00000000000000000000000000000000000000000000000000000000000000000001876 246.0
BYD3_k127_5823272_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.0000000000000000000000000000000000003873 143.0
BYD3_k127_5823272_6 WHG domain - - - 0.00000000000000000000000007154 113.0
BYD3_k127_5823272_7 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000004342 71.0
BYD3_k127_5867971_0 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 328.0
BYD3_k127_5867971_1 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003715 294.0
BYD3_k127_5867971_2 Dehydrogenase K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000002649 240.0
BYD3_k127_5867971_3 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000135 215.0
BYD3_k127_5867971_4 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.00000000000000001384 87.0
BYD3_k127_5869401_0 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 0.0 1224.0
BYD3_k127_5869401_1 SMART alpha amylase catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.0 1223.0
BYD3_k127_5869401_2 trehalohydrolase K01236 - 3.2.1.141 5.362e-202 661.0
BYD3_k127_5869401_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 416.0
BYD3_k127_5869401_4 PFAM Conserved TM helix repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 294.0
BYD3_k127_5869924_0 Phospholipase D Active site motif K01115 - 3.1.4.4 2.124e-221 703.0
BYD3_k127_5869924_1 Catechol dioxygenase N terminus K03381 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006725,GO:0008150,GO:0008152,GO:0008199,GO:0009056,GO:0009712,GO:0009987,GO:0016491,GO:0016701,GO:0016702,GO:0018576,GO:0018958,GO:0019114,GO:0019336,GO:0019439,GO:0019614,GO:0019615,GO:0042952,GO:0043167,GO:0043169,GO:0044237,GO:0044248,GO:0046872,GO:0046914,GO:0051213,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 1.13.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004267 357.0
BYD3_k127_5869924_2 endonuclease exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002242 270.0
BYD3_k127_5869924_3 Protein of unknown function (DUF3300) - - - 0.000000000000000000000000000000000000000000008512 173.0
BYD3_k127_5869924_4 NMT1-like family - - - 0.0000000000000000000000000000000000000233 155.0
BYD3_k127_5869924_5 EF-hand domain pair - - - 0.00004968 51.0
BYD3_k127_5897223_0 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 1.718e-267 841.0
BYD3_k127_5897223_1 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 310.0
BYD3_k127_5897223_2 depolymerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 298.0
BYD3_k127_5897223_3 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 294.0
BYD3_k127_5897223_4 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000002462 200.0
BYD3_k127_5897223_5 TPM domain K08988 - - 0.00000000000000000000000000000000000000000000000000547 185.0
BYD3_k127_5897223_6 helix_turn_helix, mercury resistance K19591,K19592 - - 0.00000000000000000000000000000000000000000000002189 174.0
BYD3_k127_5898013_0 HMGL-like K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000475 450.0
BYD3_k127_5898013_1 dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 345.0
BYD3_k127_5898013_2 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 341.0
BYD3_k127_5898013_3 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009936 277.0
BYD3_k127_5898013_4 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000004483 269.0
BYD3_k127_5898013_5 protocatechuate 3,4-dioxygenase, beta subunit K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000003189 201.0
BYD3_k127_5898013_6 Protein-S-isoprenylcysteine methyltransferase - - - 0.00000000000000000000000000000000000000000000000001173 184.0
BYD3_k127_5898013_7 protocatechuate 3,4-dioxygenase K00448 - 1.13.11.3 0.0000000000000000000000000000000000001076 149.0
BYD3_k127_5898013_8 Auxin binding protein - - - 0.000000000000000000000000000000000003396 142.0
BYD3_k127_5898013_9 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000002975 131.0
BYD3_k127_5912289_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 399.0
BYD3_k127_5912289_1 Haloacid dehalogenase-like hydrolase K01560,K07025 - 3.8.1.2 0.0000000001452 69.0
BYD3_k127_5949267_0 histidine kinase A domain protein - - - 0.0 1964.0
BYD3_k127_5949267_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 2.952e-244 767.0
BYD3_k127_5949267_10 - - - - 0.000000000000000004559 90.0
BYD3_k127_5949267_11 COG2202 FOG PAS PAC domain - - - 0.0000000001335 64.0
BYD3_k127_5949267_2 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007147 603.0
BYD3_k127_5949267_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 421.0
BYD3_k127_5949267_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 416.0
BYD3_k127_5949267_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 320.0
BYD3_k127_5949267_6 permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003291 279.0
BYD3_k127_5949267_7 phospholipase d K01115 - 3.1.4.4 0.000000000000000000000000000000000000000000009108 173.0
BYD3_k127_5949267_8 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase K03606 - - 0.0000000000000000000000000000000004897 131.0
BYD3_k127_5949267_9 cheY-homologous receiver domain - - - 0.0000000000000000005342 102.0
BYD3_k127_5952235_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 1.037e-270 841.0
BYD3_k127_5952235_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 338.0
BYD3_k127_5952235_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001914 281.0
BYD3_k127_5952235_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001592 275.0
BYD3_k127_5952235_4 PFAM Enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001221 284.0
BYD3_k127_5952235_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000003065 221.0
BYD3_k127_5952235_6 Reversible hydration of carbon dioxide K01673 GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008270,GO:0015976,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914 4.2.1.1 0.00000000000000000000000000000000000003488 148.0
BYD3_k127_5952251_0 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 534.0
BYD3_k127_5952251_1 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 508.0
BYD3_k127_5952251_2 Histidine kinase K07641 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 374.0
BYD3_k127_5952251_3 hydrolases of the HAD superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 315.0
BYD3_k127_5952251_4 SMART Transport-associated and nodulation region - - - 0.0000001865 59.0
BYD3_k127_5952251_5 EF hand - - - 0.0009183 48.0
BYD3_k127_6026241_0 Aminomethyltransferase folate-binding domain K15066 - 2.1.1.341 3.548e-220 690.0
BYD3_k127_6026241_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 605.0
BYD3_k127_6026241_10 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.00000000000000000000000000000000000000000000000000000000000000000000000000005018 267.0
BYD3_k127_6026241_11 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.00000000000000000000000000000000000000000000000000000000004496 211.0
BYD3_k127_6026241_12 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000000000000000000000000000000000006408 196.0
BYD3_k127_6026241_13 Methionine synthase K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000001252 179.0
BYD3_k127_6026241_14 Protein of unknown function (DUF3299) K09950 - - 0.0000000000000000000000000000000000000000002564 164.0
BYD3_k127_6026241_15 - - - - 0.00000000000000000005627 91.0
BYD3_k127_6026241_2 Cobalamin synthesis protein cobW C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004905 466.0
BYD3_k127_6026241_3 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 457.0
BYD3_k127_6026241_4 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000092 387.0
BYD3_k127_6026241_5 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 389.0
BYD3_k127_6026241_6 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007496 356.0
BYD3_k127_6026241_7 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 328.0
BYD3_k127_6026241_8 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 312.0
BYD3_k127_6026241_9 PFAM oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003249 273.0
BYD3_k127_6035059_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1286.0
BYD3_k127_6035059_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.965e-255 802.0
BYD3_k127_6035059_10 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009817 326.0
BYD3_k127_6035059_11 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005418 306.0
BYD3_k127_6035059_12 PFAM binding-protein-dependent transport systems inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004376 293.0
BYD3_k127_6035059_13 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009311 276.0
BYD3_k127_6035059_14 ABC transporter K06857 - 3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000001092 259.0
BYD3_k127_6035059_15 Transcriptional regulator of molybdate metabolism, LysR family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000007901 231.0
BYD3_k127_6035059_16 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000001077 224.0
BYD3_k127_6035059_17 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000000000000000000000000000000000000000178 218.0
BYD3_k127_6035059_18 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000003226 191.0
BYD3_k127_6035059_19 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000004666 168.0
BYD3_k127_6035059_2 Probable molybdopterin binding domain K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 514.0
BYD3_k127_6035059_20 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000003352 128.0
BYD3_k127_6035059_21 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000005274 114.0
BYD3_k127_6035059_22 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.0000000000000000001092 94.0
BYD3_k127_6035059_3 chromate transporter K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 439.0
BYD3_k127_6035059_4 Protein of unknown function (DUF3641) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 430.0
BYD3_k127_6035059_5 4Fe-4S dicluster domain K00124,K07307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 405.0
BYD3_k127_6035059_6 COG2998 ABC-type tungstate transport system, permease component K05772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 389.0
BYD3_k127_6035059_7 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 378.0
BYD3_k127_6035059_8 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 365.0
BYD3_k127_6035059_9 formate dehydrogenase K00127 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005939 342.0
BYD3_k127_6035986_0 COG3653 N-acyl-D-aspartate D-glutamate deacylase - - - 9.249e-270 839.0
BYD3_k127_6035986_1 Flavin-binding monooxygenase-like - - - 1.583e-245 772.0
BYD3_k127_6035986_10 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 351.0
BYD3_k127_6035986_11 Major facilitator superfamily K05820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 347.0
BYD3_k127_6035986_12 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007837 322.0
BYD3_k127_6035986_13 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 321.0
BYD3_k127_6035986_14 Adenylate cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 297.0
BYD3_k127_6035986_15 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003108 278.0
BYD3_k127_6035986_16 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001769 278.0
BYD3_k127_6035986_17 abc transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002435 251.0
BYD3_k127_6035986_18 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000135 239.0
BYD3_k127_6035986_19 oxidation-reduction process - - - 0.0000000000000000000000000000000000000000000000000000000317 205.0
BYD3_k127_6035986_2 Fumarate reductase flavoprotein C-term - - - 6.163e-204 649.0
BYD3_k127_6035986_20 Esterase PHB depolymerase K05973 - 3.1.1.75 0.000000000000000000000000000000000000000000000000000001823 204.0
BYD3_k127_6035986_21 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000000008768 154.0
BYD3_k127_6035986_22 ATPases associated with a variety of cellular activities K01995 - - 0.000000000000003944 76.0
BYD3_k127_6035986_3 Periplasmic binding protein domain K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 541.0
BYD3_k127_6035986_4 FAD binding domain K00480 - 1.14.13.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 432.0
BYD3_k127_6035986_5 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 421.0
BYD3_k127_6035986_6 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 432.0
BYD3_k127_6035986_7 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003183 399.0
BYD3_k127_6035986_8 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 372.0
BYD3_k127_6035986_9 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 366.0
BYD3_k127_6047094_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007764 524.0
BYD3_k127_6047094_1 Queuosine biosynthesis protein K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 384.0
BYD3_k127_6047094_2 Preprotein translocase subunit K03210 - - 0.000000000000000000000000000000001802 137.0
BYD3_k127_6047094_3 - - - - 0.000005548 51.0
BYD3_k127_6064733_0 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.00000000000000000000000000000000000000000000000000000003701 203.0
BYD3_k127_6064733_1 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000001439 157.0
BYD3_k127_6064733_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07715 - - 0.00000000000000000000000000000000000000001735 156.0
BYD3_k127_6123818_0 Mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 534.0
BYD3_k127_6123818_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000002534 150.0
BYD3_k127_6131467_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 3.921e-278 868.0
BYD3_k127_6131467_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006391 562.0
BYD3_k127_6131467_10 Transcriptional regulator - - - 0.0000000000000001001 86.0
BYD3_k127_6131467_11 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000005867 56.0
BYD3_k127_6131467_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008601 511.0
BYD3_k127_6131467_3 PFAM aminotransferase, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007377 400.0
BYD3_k127_6131467_4 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 378.0
BYD3_k127_6131467_5 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003751 276.0
BYD3_k127_6131467_6 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000001611 228.0
BYD3_k127_6131467_7 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000002442 211.0
BYD3_k127_6131467_8 CorA-like Mg2+ transporter protein K03284 - - 0.00000000000000000000000000000000000000000001782 174.0
BYD3_k127_6131467_9 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.000000000000000000000000000000000000004628 160.0
BYD3_k127_6132703_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1293.0
BYD3_k127_6132703_1 Orn/Lys/Arg decarboxylase, C-terminal domain K01583 - 4.1.1.19 4.345e-279 871.0
BYD3_k127_6132703_10 OmpA-like transmembrane domain - - - 0.0000000000000000000000000000896 123.0
BYD3_k127_6132703_11 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000265 93.0
BYD3_k127_6132703_12 Gram-negative bacterial TonB protein C-terminal - - - 0.0000007516 61.0
BYD3_k127_6132703_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 2.218e-197 627.0
BYD3_k127_6132703_3 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 468.0
BYD3_k127_6132703_4 Neisseria PilC beta-propeller domain K02674 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 364.0
BYD3_k127_6132703_5 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 315.0
BYD3_k127_6132703_6 SMART metal-dependent phosphohydrolase, HD region K01139 - 2.7.6.5,3.1.7.2 0.0000000000000000000000000000000000000000000000000000000000000000001996 235.0
BYD3_k127_6132703_7 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000002073 242.0
BYD3_k127_6132703_8 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000001522 187.0
BYD3_k127_6132703_9 Protein of unknown function (DUF962) - - - 0.0000000000000000000000000000000000000000004132 171.0
BYD3_k127_6164216_0 Putative modulator of DNA gyrase K03568 - - 4.52e-227 711.0
BYD3_k127_6164216_1 COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007723 324.0
BYD3_k127_6164216_2 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 304.0
BYD3_k127_6164216_3 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009264 300.0
BYD3_k127_6164216_4 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000002809 247.0
BYD3_k127_6164216_5 COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000001748 256.0
BYD3_k127_6164216_6 ABC transporter substrate binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000001679 228.0
BYD3_k127_6174796_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044262,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046459,GO:0046487,GO:0046872,GO:0046914,GO:0047456,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 1.271e-319 1000.0
BYD3_k127_6174796_1 Amidohydrolase family K01464,K01465,K01466 - 3.5.2.2,3.5.2.3,3.5.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009563 605.0
BYD3_k127_6174796_10 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000774 414.0
BYD3_k127_6174796_11 transport system periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 359.0
BYD3_k127_6174796_12 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 350.0
BYD3_k127_6174796_13 NMT1/THI5 like K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 354.0
BYD3_k127_6174796_14 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007709 347.0
BYD3_k127_6174796_15 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 343.0
BYD3_k127_6174796_16 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 329.0
BYD3_k127_6174796_17 cobalamin synthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007024 320.0
BYD3_k127_6174796_18 proteasome-type protease K07395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 310.0
BYD3_k127_6174796_19 Glutathione S-transferase, C-terminal domain K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 312.0
BYD3_k127_6174796_2 COG0044 Dihydroorotase and related cyclic amidohydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009138 595.0
BYD3_k127_6174796_20 Asp/Glu/Hydantoin racemase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 317.0
BYD3_k127_6174796_21 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 303.0
BYD3_k127_6174796_22 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 300.0
BYD3_k127_6174796_23 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002456 271.0
BYD3_k127_6174796_24 PFAM Asparaginase glutaminase K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000004961 280.0
BYD3_k127_6174796_25 Cobalamin synthesis protein cobW C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000001707 233.0
BYD3_k127_6174796_26 Phosphoenolpyruvate phosphomutase K01841 - 5.4.2.9 0.00000000000000000000000000000000000000000000000000000000007954 218.0
BYD3_k127_6174796_27 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.00000000000000000000000000000000000000000000000000000000009911 212.0
BYD3_k127_6174796_28 COG4665 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00000000000000000000000000000000000000000001744 167.0
BYD3_k127_6174796_29 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000004337 161.0
BYD3_k127_6174796_3 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 553.0
BYD3_k127_6174796_30 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000009942 136.0
BYD3_k127_6174796_31 polar amino acid transport system K02028 - 3.6.3.21 0.0000000000000000000000007973 113.0
BYD3_k127_6174796_32 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000007932 105.0
BYD3_k127_6174796_33 flavin adenine dinucleotide binding - - - 0.00000000000000001199 96.0
BYD3_k127_6174796_34 Hydantoin racemase - - - 0.00000000000000002928 86.0
BYD3_k127_6174796_35 oxidation-reduction process K09022 - 3.5.99.10 0.0000000000001171 78.0
BYD3_k127_6174796_36 LysR substrate binding domain - - - 0.000000000004644 73.0
BYD3_k127_6174796_37 Dienelactone hydrolase - - - 0.0000000881 62.0
BYD3_k127_6174796_4 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 544.0
BYD3_k127_6174796_5 FAD binding domain K05898,K13796 - 1.3.99.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 530.0
BYD3_k127_6174796_6 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 479.0
BYD3_k127_6174796_7 belongs to the bacterial solute-binding protein 3 family K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 464.0
BYD3_k127_6174796_8 FAD dependent oxidoreductase K00244 - 1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 457.0
BYD3_k127_6174796_9 polar amino acid transport system K02028 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 418.0
BYD3_k127_6182082_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 2.212e-262 818.0
BYD3_k127_6182082_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 5.358e-260 814.0
BYD3_k127_6182082_10 Lytic murein transglycosylase K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 307.0
BYD3_k127_6182082_11 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005064 278.0
BYD3_k127_6182082_12 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002687 272.0
BYD3_k127_6182082_13 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001119 274.0
BYD3_k127_6182082_14 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000005013 261.0
BYD3_k127_6182082_15 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001921 263.0
BYD3_k127_6182082_16 Protein of unknown function (DUF3501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007654 252.0
BYD3_k127_6182082_17 PFAM N-acetylmuramoyl-L-alanine amidase K03806 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000001488 229.0
BYD3_k127_6182082_18 peptidase K06194 - - 0.00000000000000000000000000000000000000000000000000000005162 207.0
BYD3_k127_6182082_19 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000007841 189.0
BYD3_k127_6182082_2 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 589.0
BYD3_k127_6182082_20 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000002353 146.0
BYD3_k127_6182082_21 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.0000000000000000000000000000000006569 131.0
BYD3_k127_6182082_22 - K06950 - - 0.0000005681 59.0
BYD3_k127_6182082_23 EamA-like transporter family - - - 0.00008243 56.0
BYD3_k127_6182082_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 531.0
BYD3_k127_6182082_4 PFAM sigma-54 factor interaction domain-containing protein K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 510.0
BYD3_k127_6182082_5 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006146 443.0
BYD3_k127_6182082_6 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009107 390.0
BYD3_k127_6182082_7 ATPase histidine kinase DNA gyrase B HSP90 domain protein K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 383.0
BYD3_k127_6182082_8 Surface antigen K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 375.0
BYD3_k127_6182082_9 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 358.0
BYD3_k127_6230175_0 Protein of unknown function - - - 7.921e-282 908.0
BYD3_k127_6230175_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 4.194e-269 855.0
BYD3_k127_6230175_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 491.0
BYD3_k127_6230175_3 heptosyltransferase II K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 332.0
BYD3_k127_6230175_4 Low affinity iron permease - - - 0.00000000000000000000000000000000000000000000001329 175.0
BYD3_k127_6230175_5 Protein of unknown function (DUF3047) - - - 0.000000000000000000000000000000000000000004997 164.0
BYD3_k127_6230175_6 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000004719 93.0
BYD3_k127_6230175_7 Zinc-finger domain - - - 0.00000000000000005296 87.0
BYD3_k127_6230175_8 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.0005555 44.0
BYD3_k127_6248589_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1457.0
BYD3_k127_6248589_1 Periplasmic domain of Sensor histidine kinase RisS K07638 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 391.0
BYD3_k127_6248589_10 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000002659 136.0
BYD3_k127_6248589_11 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03321 - - 0.0000000000000000000000027 109.0
BYD3_k127_6248589_12 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000596 113.0
BYD3_k127_6248589_13 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K20940 - 1.14.13.218 0.0001561 44.0
BYD3_k127_6248589_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07659 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 347.0
BYD3_k127_6248589_3 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002701 293.0
BYD3_k127_6248589_4 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001852 285.0
BYD3_k127_6248589_5 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004764 255.0
BYD3_k127_6248589_6 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000007639 237.0
BYD3_k127_6248589_7 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000002215 216.0
BYD3_k127_6248589_8 transcriptional regulator K07734 - - 0.00000000000000000000000000000000000000000000000002984 188.0
BYD3_k127_6248589_9 - - - - 0.0000000000000000000000000000000001883 135.0
BYD3_k127_6258881_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1348.0
BYD3_k127_6258881_1 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0 1185.0
BYD3_k127_6258881_10 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 427.0
BYD3_k127_6258881_11 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006113,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015980,GO:0016042,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0032787,GO:0042737,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0046421,GO:0046459,GO:0046872,GO:0055114,GO:0071704,GO:0072329,GO:1901575 4.1.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000623 425.0
BYD3_k127_6258881_12 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 297.0
BYD3_k127_6258881_13 cytochrome - - - 0.0000000000000000000000000000000000000001105 164.0
BYD3_k127_6258881_14 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.000000000000000000000000000000000005813 140.0
BYD3_k127_6258881_15 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 - - 0.0000000000000000000000000000000001774 141.0
BYD3_k127_6258881_16 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 - - 0.000000000000000000000000000004603 124.0
BYD3_k127_6258881_17 Protein of unknown function (DUF3460) - - - 0.000000008964 59.0
BYD3_k127_6258881_18 Flavinator of succinate dehydrogenase K09159 - - 0.00000003774 64.0
BYD3_k127_6258881_19 Protein required for attachment to host cells - - - 0.00006325 49.0
BYD3_k127_6258881_2 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 1.317e-255 807.0
BYD3_k127_6258881_3 2-methylcitrate dehydratase K01720 - 4.2.1.79 3.76e-245 764.0
BYD3_k127_6258881_4 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.773e-227 709.0
BYD3_k127_6258881_5 Amidohydrolase family K01465 - 3.5.2.3 6.212e-197 623.0
BYD3_k127_6258881_6 TonB-dependent Receptor Plug Domain K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 610.0
BYD3_k127_6258881_7 Belongs to the citrate synthase family K01659 - 2.3.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006936 585.0
BYD3_k127_6258881_8 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928 549.0
BYD3_k127_6258881_9 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 475.0
BYD3_k127_6315811_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 327.0
BYD3_k127_6315811_1 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000002467 138.0
BYD3_k127_6315811_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000001169 131.0
BYD3_k127_6315811_3 Preprotein translocase subunit SecG K03075 - - 0.00000000000000000000000005882 114.0
BYD3_k127_6315811_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000003303 78.0
BYD3_k127_6315811_5 Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331,K03940 - 1.6.5.3,1.6.99.3 0.0000000002508 64.0
BYD3_k127_6369660_0 PFAM glycoside hydrolase 15-related - - - 2.536e-246 775.0
BYD3_k127_6369660_1 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007877 351.0
BYD3_k127_6369660_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000025 94.0
BYD3_k127_6377121_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0 1079.0
BYD3_k127_6377121_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 3.726e-240 761.0
BYD3_k127_6377121_10 Thiol-disulfide isomerase K00384 - 1.8.1.9 0.000000000000000000000000005796 112.0
BYD3_k127_6377121_11 Virulence factor BrkB K07058 - - 0.0000000000000000000000003745 110.0
BYD3_k127_6377121_13 Domain of unknown function (DUF4864) - - - 0.00004023 50.0
BYD3_k127_6377121_2 Starch synthase catalytic domain K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 447.0
BYD3_k127_6377121_3 PFAM Na dependent nucleoside transporter K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 439.0
BYD3_k127_6377121_4 PFAM ATPase associated with various cellular activities AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 423.0
BYD3_k127_6377121_5 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 411.0
BYD3_k127_6377121_6 PFAM Serine threonine protein kinase-related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 396.0
BYD3_k127_6377121_7 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 349.0
BYD3_k127_6377121_8 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 323.0
BYD3_k127_6377121_9 PFAM Lytic transglycosylase catalytic - - - 0.00000000000000000000000000000000004231 146.0
BYD3_k127_6383631_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 572.0
BYD3_k127_6383631_1 Oligopeptide/dipeptide transporter, C-terminal region K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 460.0
BYD3_k127_6383631_2 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006211 436.0
BYD3_k127_6383631_3 Binding-protein-dependent transport system inner membrane component K02033,K15585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 394.0
BYD3_k127_6383631_4 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 382.0
BYD3_k127_6383631_5 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 308.0
BYD3_k127_6383631_6 AzlC protein - - - 0.000000000000000000000000000000000000000002219 163.0
BYD3_k127_6383631_7 L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000001648 114.0
BYD3_k127_6383631_8 Branched-chain amino acid transport protein (AzlD) - - - 0.000000000000000001569 91.0
BYD3_k127_6406671_0 AMP-binding enzyme C-terminal domain K00666,K20034 - 6.2.1.44 6.991e-246 768.0
BYD3_k127_6406671_1 Putative diguanylate phosphodiesterase - - - 6.674e-195 650.0
BYD3_k127_6406671_10 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000001716 235.0
BYD3_k127_6406671_11 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000002644 232.0
BYD3_k127_6406671_12 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000819 213.0
BYD3_k127_6406671_13 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000000000000000000000004979 177.0
BYD3_k127_6406671_14 Tetratricopeptide repeat - - - 0.00000000000000000000000000002592 127.0
BYD3_k127_6406671_15 - - - - 0.000000000000000000000000007839 121.0
BYD3_k127_6406671_16 Protein of unknown function (DUF3301) - - - 0.00000000000000000000001061 103.0
BYD3_k127_6406671_17 COG0457 FOG TPR repeat - - - 0.000000000000000000006975 100.0
BYD3_k127_6406671_18 - - - - 0.000000002101 68.0
BYD3_k127_6406671_2 Periplasmic binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007526 582.0
BYD3_k127_6406671_3 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009169 518.0
BYD3_k127_6406671_4 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 470.0
BYD3_k127_6406671_5 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121 481.0
BYD3_k127_6406671_6 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 433.0
BYD3_k127_6406671_7 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006142 339.0
BYD3_k127_6406671_8 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001284 261.0
BYD3_k127_6406671_9 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K07516 - 1.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000003395 261.0
BYD3_k127_6412736_0 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 493.0
BYD3_k127_6412736_1 ABC transporter K06020 - 3.6.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 387.0
BYD3_k127_6412736_2 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000003164 173.0
BYD3_k127_642706_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1154.0
BYD3_k127_6515042_0 Belongs to the TPP enzyme family K01577 - 4.1.1.8 7.68e-309 954.0
BYD3_k127_6515042_1 Tripartite tricarboxylate transporter TctA family K07793 - - 2.51e-245 765.0
BYD3_k127_6515042_2 CoA-transferase family III K07749,K14471,K14472 - 2.8.3.16,2.8.3.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 586.0
BYD3_k127_6515042_3 PFAM formyl transferase domain protein K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 447.0
BYD3_k127_6515042_4 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 349.0
BYD3_k127_6515042_5 (FHA) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 315.0
BYD3_k127_6515042_6 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008475 262.0
BYD3_k127_6515042_7 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000000000000000000000000000005149 151.0
BYD3_k127_6515042_8 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000007973 131.0
BYD3_k127_6515707_0 AMP-dependent synthetase - - - 4.17e-304 959.0
BYD3_k127_6515707_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000758 595.0
BYD3_k127_6515707_10 Cupin domain - - - 0.0000000000000000000000000000000002366 139.0
BYD3_k127_6515707_11 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K20023 - 4.2.1.156,4.2.1.42 0.0000000000000000000000000000002369 130.0
BYD3_k127_6515707_2 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 584.0
BYD3_k127_6515707_3 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005076 492.0
BYD3_k127_6515707_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5,6.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 501.0
BYD3_k127_6515707_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 321.0
BYD3_k127_6515707_6 Phenazine biosynthesis-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001367 256.0
BYD3_k127_6515707_7 Protein of unknown function (DUF2889) - - - 0.00000000000000000000000000000000000000000000000000000000000000001648 228.0
BYD3_k127_6515707_8 Asp Glu hydantoin racemase - - - 0.00000000000000000000000000000000000000000000000000000001949 204.0
BYD3_k127_6515707_9 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.0000000000000000000000000000000000000000000004928 169.0
BYD3_k127_6534425_0 type II secretion system protein K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 608.0
BYD3_k127_6534425_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 589.0
BYD3_k127_6534425_10 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 347.0
BYD3_k127_6534425_11 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 341.0
BYD3_k127_6534425_12 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 333.0
BYD3_k127_6534425_13 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005013 336.0
BYD3_k127_6534425_14 Thiamine monophosphate synthase K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006943 322.0
BYD3_k127_6534425_15 CBS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 326.0
BYD3_k127_6534425_16 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005193 266.0
BYD3_k127_6534425_17 COG0500 SAM-dependent methyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000194 212.0
BYD3_k127_6534425_18 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000000001116 213.0
BYD3_k127_6534425_19 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000004667 199.0
BYD3_k127_6534425_2 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 595.0
BYD3_k127_6534425_20 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000000000004171 193.0
BYD3_k127_6534425_21 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000001163 193.0
BYD3_k127_6534425_22 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000001122 177.0
BYD3_k127_6534425_23 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000001148 153.0
BYD3_k127_6534425_24 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000009809 134.0
BYD3_k127_6534425_25 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000008507 124.0
BYD3_k127_6534425_26 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000000000006666 112.0
BYD3_k127_6534425_27 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000000000004844 76.0
BYD3_k127_6534425_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 491.0
BYD3_k127_6534425_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 454.0
BYD3_k127_6534425_5 Memo-like protein K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 432.0
BYD3_k127_6534425_6 Major facilitator Superfamily K08177 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009286 418.0
BYD3_k127_6534425_7 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 402.0
BYD3_k127_6534425_8 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 370.0
BYD3_k127_6534425_9 ATPase (AAA K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 370.0
BYD3_k127_6541830_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 1.053e-206 654.0
BYD3_k127_6541830_1 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005533 548.0
BYD3_k127_6541830_10 phosphosulfolactate synthase activity K08097 - 4.4.1.19 0.0000000000000000000000000000000000000000000000009391 186.0
BYD3_k127_6541830_11 Protein conserved in bacteria K07793 - - 0.000000000000000000000000000000000000135 143.0
BYD3_k127_6541830_12 Belongs to the TPP enzyme family K03852 - 2.3.3.15 0.0000000000000000000000000002538 115.0
BYD3_k127_6541830_13 Composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism K02160 - - 0.000000000009522 69.0
BYD3_k127_6541830_14 Sulfite exporter TauE/SafE K07090 - - 0.0000004173 61.0
BYD3_k127_6541830_2 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 535.0
BYD3_k127_6541830_3 Zinc-binding dehydrogenase K00001,K19745 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 488.0
BYD3_k127_6541830_4 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005256 451.0
BYD3_k127_6541830_5 PFAM sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 420.0
BYD3_k127_6541830_6 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 368.0
BYD3_k127_6541830_7 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 338.0
BYD3_k127_6541830_8 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 307.0
BYD3_k127_6541830_9 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006351 277.0
BYD3_k127_6545481_0 binding-protein-dependent transport systems inner membrane component K02011 - - 8.521e-241 756.0
BYD3_k127_6545481_1 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 490.0
BYD3_k127_6545481_2 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily K03430 - 2.6.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006755 463.0
BYD3_k127_6545481_3 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000007674 123.0
BYD3_k127_6549239_0 nitrite transporter K02575 - - 3.073e-318 978.0
BYD3_k127_6549239_1 nitrate nitrite transporter K02575 - - 1.74e-198 627.0
BYD3_k127_6549239_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370,K17050 - 1.7.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 546.0
BYD3_k127_6549239_3 COG4635 Flavodoxin K00230 - 1.3.5.3 0.0000000000000000000000000000000001416 138.0
BYD3_k127_6549239_4 cytochrome - - - 0.00001459 53.0
BYD3_k127_6552218_0 Protein of unknown function (DUF521) K09123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 586.0
BYD3_k127_6552218_1 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000939 388.0
BYD3_k127_6552218_2 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K03119 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005623 319.0
BYD3_k127_6552218_3 LrgB-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 308.0
BYD3_k127_6552218_4 Protein of unknown function DUF126 K09128 - - 0.00000000000000000000000000000000000000000000000000007088 194.0
BYD3_k127_6552218_5 protein conserved in bacteria - - - 0.0000000000000000000000000000000001134 138.0
BYD3_k127_6552218_6 PFAM LrgA family protein K06518 - - 0.00000000000000000000000000000002136 130.0
BYD3_k127_6552218_7 GYD domain - - - 0.000000000000000000000001453 106.0
BYD3_k127_6552218_8 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.000002807 51.0
BYD3_k127_6553271_0 4-Hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 552.0
BYD3_k127_6553271_1 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 435.0
BYD3_k127_6553271_2 UDP-glucose 4-epimerase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 429.0
BYD3_k127_6553271_3 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 362.0
BYD3_k127_6553271_4 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000002849 218.0
BYD3_k127_6553271_5 manually curated - - - 0.00000000000000000000000000000006825 126.0
BYD3_k127_6553271_6 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000002261 106.0
BYD3_k127_6553271_7 - - - - 0.000000000000002114 77.0
BYD3_k127_6553271_8 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.0000004147 56.0
BYD3_k127_664278_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 1.055e-266 845.0
BYD3_k127_664278_1 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 6.844e-219 689.0
BYD3_k127_664278_10 PFAM EAL domain, GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 491.0
BYD3_k127_664278_11 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 420.0
BYD3_k127_664278_12 C-terminal domain of 1-Cys peroxiredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 364.0
BYD3_k127_664278_13 Amidohydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 363.0
BYD3_k127_664278_14 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006455 340.0
BYD3_k127_664278_15 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 321.0
BYD3_k127_664278_16 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 325.0
BYD3_k127_664278_17 Aldo/keto reductase family K05275 - 1.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005318 318.0
BYD3_k127_664278_18 proline dipeptidase activity K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 323.0
BYD3_k127_664278_19 PFAM peptidase M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004415 308.0
BYD3_k127_664278_2 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 1.861e-212 681.0
BYD3_k127_664278_20 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005283 309.0
BYD3_k127_664278_21 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007931 295.0
BYD3_k127_664278_22 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 290.0
BYD3_k127_664278_23 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001188 287.0
BYD3_k127_664278_24 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000004852 250.0
BYD3_k127_664278_25 Pirin C-terminal cupin domain K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000495 250.0
BYD3_k127_664278_26 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000001353 216.0
BYD3_k127_664278_27 Sir2 family K12410 - - 0.0000000000000000000000000000000000000000000000000000000000009699 230.0
BYD3_k127_664278_28 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000517 210.0
BYD3_k127_664278_29 Cobalamin synthesis protein cobW C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000001458 211.0
BYD3_k127_664278_3 ribosomal rna small subunit methyltransferase - - - 2.112e-197 630.0
BYD3_k127_664278_30 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000004724 201.0
BYD3_k127_664278_31 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000001814 178.0
BYD3_k127_664278_32 Glycine-zipper domain - - - 0.00000000000000000000000000000000000000004954 158.0
BYD3_k127_664278_33 Pyridoxamine 5'-phosphate oxidase like - - - 0.0000000000000000000000000000000000000003485 153.0
BYD3_k127_664278_34 epimerase - - - 0.000000000000000000000000000000000000002219 156.0
BYD3_k127_664278_35 - - - - 0.000000000000000000000000000000002343 132.0
BYD3_k127_664278_36 MarR family - - - 0.000000000000000000000000000000005086 134.0
BYD3_k127_664278_37 - - - - 0.000000000000000000000000005082 113.0
BYD3_k127_664278_38 - - - - 0.0000000000001472 72.0
BYD3_k127_664278_39 ChrR Cupin-like domain - - - 0.000000000005535 76.0
BYD3_k127_664278_4 Domain of unknown function (DUF4139) - - - 4.303e-194 619.0
BYD3_k127_664278_40 Protein of unknown function (DUF2846) - - - 0.000003036 50.0
BYD3_k127_664278_41 TonB C terminal K03646 - - 0.00001009 56.0
BYD3_k127_664278_5 cysteine synthase K01697 - 4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 614.0
BYD3_k127_664278_6 4-hydroxyphenylacetate 3-hydroxylase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005286 586.0
BYD3_k127_664278_7 Aldehyde dehydrogenase family K02618,K15514 - 1.2.1.77,1.2.1.91,3.3.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 572.0
BYD3_k127_664278_8 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01758 - 4.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 555.0
BYD3_k127_664278_9 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005675 553.0
BYD3_k127_6739946_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 2.416e-286 904.0
BYD3_k127_6739946_1 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 618.0
BYD3_k127_6739946_10 HNH nucleases - - - 0.000000000000000000000000000006406 124.0
BYD3_k127_6739946_11 Uncharacterized protein conserved in bacteria (DUF2171) - - - 0.000000000000000000005627 96.0
BYD3_k127_6739946_12 Belongs to the small heat shock protein (HSP20) family - - - 0.00001094 48.0
BYD3_k127_6739946_2 Bacterial regulatory helix-turn-helix protein, lysR family K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009764 282.0
BYD3_k127_6739946_3 COG0210 Superfamily I DNA and RNA helicases K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001265 276.0
BYD3_k127_6739946_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001187 270.0
BYD3_k127_6739946_5 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00000000000000000000000000000000000000000000000000000009023 210.0
BYD3_k127_6739946_6 Protein of unknown function (DUF1643) - - - 0.0000000000000000000000000000000000000000000000000000003611 198.0
BYD3_k127_6739946_7 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate - - - 0.00000000000000000000000000000000000000000000000000004578 196.0
BYD3_k127_6739946_8 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000002673 183.0
BYD3_k127_6739946_9 NUDIX domain - - - 0.0000000000000000000000000000000000000000000007431 169.0
BYD3_k127_6847184_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 525.0
BYD3_k127_6847184_1 Uracil DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007011 280.0
BYD3_k127_6854477_0 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007945 314.0
BYD3_k127_6854477_1 PFAM monooxygenase FAD-binding - - - 0.000000000000000000000000000000000000000000000000008669 194.0
BYD3_k127_6854477_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000008687 88.0
BYD3_k127_6854477_3 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000129 73.0
BYD3_k127_6862219_0 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 456.0
BYD3_k127_6862219_1 Cysteine-rich domain K18928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 347.0
BYD3_k127_6862219_2 LUD domain K18929 - - 0.00000000000000000000000000000000009236 146.0
BYD3_k127_6862219_3 Tripartite tricarboxylate transporter TctA family K07793 - - 0.0004827 43.0
BYD3_k127_688100_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 344.0
BYD3_k127_6890297_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006561 606.0
BYD3_k127_6890297_1 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 584.0
BYD3_k127_6890297_2 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 517.0
BYD3_k127_6890297_3 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001504 283.0
BYD3_k127_6890297_4 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000000006138 191.0
BYD3_k127_6890297_5 Cupin domain - - - 0.00000000000000000000000000000000000000664 150.0
BYD3_k127_6890297_6 small protein containing a coiled-coil domain - - - 0.00000000000007439 73.0
BYD3_k127_6913694_0 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006498 421.0
BYD3_k127_6913694_1 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 351.0
BYD3_k127_6913694_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 320.0
BYD3_k127_6913694_3 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009493 248.0
BYD3_k127_6913694_4 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000001493 232.0
BYD3_k127_6913694_5 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000001321 125.0
BYD3_k127_6913694_6 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000001956 74.0
BYD3_k127_694955_0 pfkB family carbohydrate kinase K16370 - 2.7.1.11 0.000000000000000000000001469 108.0
BYD3_k127_694955_1 pfkB family carbohydrate kinase K16370 - 2.7.1.11 0.000000000000000000000003784 109.0
BYD3_k127_694955_2 Belongs to the carbohydrate kinase PfkB family K16370 - 2.7.1.11 0.000000000000000001862 90.0
BYD3_k127_694955_3 AMP binding - - - 0.00000000000000001431 93.0
BYD3_k127_694955_4 - - - - 0.0001007 50.0
BYD3_k127_694955_5 Belongs to the carbohydrate kinase PfkB family K16370 - 2.7.1.11 0.0003058 49.0
BYD3_k127_6955907_0 Uncharacterised protein family (UPF0261) - - - 1.09e-319 992.0
BYD3_k127_6955907_1 Flotillin - - - 1.687e-209 666.0
BYD3_k127_6955907_10 HlyD family secretion protein K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003776 247.0
BYD3_k127_6955907_11 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000002907 239.0
BYD3_k127_6955907_12 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000005184 202.0
BYD3_k127_6955907_2 Amidohydrolase family - - - 5.443e-198 624.0
BYD3_k127_6955907_3 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 496.0
BYD3_k127_6955907_4 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 470.0
BYD3_k127_6955907_5 Phosphoenolpyruvate hydrolase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 409.0
BYD3_k127_6955907_6 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006954 391.0
BYD3_k127_6955907_7 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 363.0
BYD3_k127_6955907_8 TAP-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002674 313.0
BYD3_k127_6955907_9 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 292.0
BYD3_k127_696415_0 Tetratricopeptide repeat - - - 0.0000000000000000000000001088 123.0
BYD3_k127_696415_1 23S rRNA-intervening sequence protein - - - 0.00000001073 57.0
BYD3_k127_7037344_0 Fumarate reductase flavoprotein C-term K00239,K00244 - 1.3.5.1,1.3.5.4 3.839e-219 684.0
BYD3_k127_7037344_1 Domain of unknown function (DUF3394) - - - 0.0000000000000000000000000000000000000000000000000000000000000005773 222.0
BYD3_k127_707529_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 5.798e-255 807.0
BYD3_k127_707529_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.735e-210 660.0
BYD3_k127_707529_2 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 475.0
BYD3_k127_707529_3 Pyruvate carboxyltransferase K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 393.0
BYD3_k127_707529_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 314.0
BYD3_k127_707529_5 Uncharacterized protein family, UPF0114 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000055 271.0
BYD3_k127_707529_6 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000000000000000000000001603 251.0
BYD3_k127_707529_7 amino acid K01999 - - 0.000000000000000016 82.0
BYD3_k127_709870_0 PFAM fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 541.0
BYD3_k127_709870_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 440.0
BYD3_k127_709870_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007649 382.0
BYD3_k127_709870_3 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008288 277.0
BYD3_k127_709870_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000001169 268.0
BYD3_k127_709870_5 Ribosomal L28 family K02902 - - 0.00000000000000000000000000001143 120.0
BYD3_k127_709870_6 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000461 94.0
BYD3_k127_709870_7 Protein of unknown function (DUF3108) - - - 0.00000000001591 74.0
BYD3_k127_709870_8 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00001401 47.0
BYD3_k127_7153087_0 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000006315 259.0
BYD3_k127_7153087_1 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000000000006826 154.0
BYD3_k127_7153087_2 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000000000000000001031 159.0
BYD3_k127_7153087_3 CHRD domain - - - 0.00000000000000000000000000000000000000007689 154.0
BYD3_k127_7153087_4 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000001944 164.0
BYD3_k127_7153087_5 Carboxymuconolactone decarboxylase family - - - 0.0005698 51.0
BYD3_k127_7158973_0 AAA domain (Cdc48 subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 490.0
BYD3_k127_7158973_1 Cytochrome c - - - 0.00000000000000000000000008827 111.0
BYD3_k127_7158973_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000001797 113.0
BYD3_k127_7158973_3 Domain of unknown function (DUF1841) - - - 0.000000000000000000000004936 102.0
BYD3_k127_7158973_4 Belongs to the UPF0301 (AlgH) family K07735 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000007001 68.0
BYD3_k127_7170975_0 Carbamoyltransferase K00612 - - 1.073e-307 953.0
BYD3_k127_7170975_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.94e-211 673.0
BYD3_k127_7170975_2 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 295.0
BYD3_k127_7170975_3 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002239 296.0
BYD3_k127_7170975_4 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000002499 226.0
BYD3_k127_7170975_5 - - - - 0.0000000000000000000000000000000001437 142.0
BYD3_k127_7170975_6 Acyltransferase family - - - 0.00000000000000000000000000001575 135.0
BYD3_k127_7170975_7 COG0438 Glycosyltransferase - - - 0.0000000000000000000000000001336 121.0
BYD3_k127_7170975_8 - - - - 0.000000000000001424 77.0
BYD3_k127_7170975_9 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000002144 72.0
BYD3_k127_7198599_0 Endoribonuclease that initiates mRNA decay K18682 - - 1.775e-231 726.0
BYD3_k127_7211838_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 602.0
BYD3_k127_7211838_1 ThiF family K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 325.0
BYD3_k127_7211838_2 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008665 295.0
BYD3_k127_7211838_3 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000008773 239.0
BYD3_k127_7217778_0 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006987 474.0
BYD3_k127_7220117_0 COG3839 ABC-type sugar transport systems, ATPase components - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 422.0
BYD3_k127_7220117_1 Binding-protein-dependent transport system inner membrane component K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 399.0
BYD3_k127_7220117_2 Binding-protein-dependent transport system inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 374.0
BYD3_k127_7220117_3 Protein involved in catalytic activity, cation binding and carbohydrate metabolic process K05343 - 3.2.1.1,5.4.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 359.0
BYD3_k127_7220117_4 NIPSNAP - - - 0.000000000000000000000000000000000000000008537 172.0
BYD3_k127_7220117_5 peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000008679 153.0
BYD3_k127_7220117_6 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000001858 128.0
BYD3_k127_7220117_7 BON domain K04065 - - 0.00000000001109 71.0
BYD3_k127_7220117_8 - - - - 0.0000000265 61.0
BYD3_k127_7232605_0 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 1.918e-268 840.0
BYD3_k127_7232605_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 450.0
BYD3_k127_7232605_2 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 407.0
BYD3_k127_7232605_3 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 359.0
BYD3_k127_7232605_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 313.0
BYD3_k127_7232605_5 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000004132 136.0
BYD3_k127_7232605_6 Outer membrane protein beta-barrel domain - - - 0.00000000000000000006133 96.0
BYD3_k127_723342_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 610.0
BYD3_k127_723342_1 Prolyl oligopeptidase family K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009334 271.0
BYD3_k127_7243967_0 FAD dependent oxidoreductase - - - 3.059e-207 653.0
BYD3_k127_7243967_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K11747 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004259 540.0
BYD3_k127_7243967_10 Chromate transporter K07240 - - 0.0000000000000000000000000000000000000000000328 174.0
BYD3_k127_7243967_11 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000006245 168.0
BYD3_k127_7243967_12 DoxX K15977 - - 0.000000000000000000000000000000000002746 142.0
BYD3_k127_7243967_13 overlaps another CDS with the same product name K07240 - - 0.0000000000000000000000000000005377 133.0
BYD3_k127_7243967_14 Flavin reductase like domain - - - 0.00000000000000000000000000005443 135.0
BYD3_k127_7243967_15 - - - - 0.00000000000000000000000000007075 120.0
BYD3_k127_7243967_16 - - - - 0.00000000000000000000000000114 119.0
BYD3_k127_7243967_17 Major facilitator Superfamily - - - 0.00000000000000000001398 106.0
BYD3_k127_7243967_18 - - - - 0.0000000000000006895 81.0
BYD3_k127_7243967_19 Antibiotic biosynthesis monooxygenase - - - 0.000000000005627 69.0
BYD3_k127_7243967_2 PFAM regulatory protein LuxR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 525.0
BYD3_k127_7243967_20 Cupin 2, conserved barrel domain protein - - - 0.000000001085 59.0
BYD3_k127_7243967_23 Belongs to the 'phage' integrase family - - - 0.00002086 53.0
BYD3_k127_7243967_3 Polysaccharide pyruvyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 489.0
BYD3_k127_7243967_4 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 417.0
BYD3_k127_7243967_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000652 398.0
BYD3_k127_7243967_6 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009749 355.0
BYD3_k127_7243967_7 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 305.0
BYD3_k127_7243967_8 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 292.0
BYD3_k127_7243967_9 - - - - 0.00000000000000000000000000000000000000000000000000001616 197.0
BYD3_k127_7244842_0 General secretory system II protein E domain protein K02454,K02652,K12276 - - 0.0 1126.0
BYD3_k127_7244842_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 2.72e-244 791.0
BYD3_k127_7244842_10 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003566 263.0
BYD3_k127_7244842_11 ABC transporter transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008036 258.0
BYD3_k127_7244842_12 Capsule polysaccharide - - - 0.00000000000000000000000000000000000000000000000000000154 210.0
BYD3_k127_7244842_13 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000000000000000000000000000000000000005399 197.0
BYD3_k127_7244842_14 lyase activity K01387,K03301 - 3.4.24.3 0.0000000000000000000000000000000000000000000000005104 192.0
BYD3_k127_7244842_15 Belongs to the N-Me-Phe pilin family K02650 - - 0.00000000000000000000000000000002172 132.0
BYD3_k127_7244842_16 Methyltransferase domain - - - 0.00000000000000000000000000000007279 134.0
BYD3_k127_7244842_17 Belongs to the N-Me-Phe pilin family K02650 - - 0.0000000000000000000000000000002327 128.0
BYD3_k127_7244842_18 CHASE2 K01768 - 4.6.1.1 0.000000000000001743 79.0
BYD3_k127_7244842_19 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000842 46.0
BYD3_k127_7244842_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. K01120 - 3.1.4.17 2.022e-225 709.0
BYD3_k127_7244842_3 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 383.0
BYD3_k127_7244842_4 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 359.0
BYD3_k127_7244842_5 PFAM Glycosyl - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 327.0
BYD3_k127_7244842_6 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 306.0
BYD3_k127_7244842_7 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007278 315.0
BYD3_k127_7244842_8 cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 311.0
BYD3_k127_7244842_9 Glycosyl transferase, group 1 K13668 - 2.4.1.346 0.0000000000000000000000000000000000000000000000000000000000000000000000000001169 273.0
BYD3_k127_7281017_0 AcrB/AcrD/AcrF family K03296,K18138,K18902 - - 2.378e-230 725.0
BYD3_k127_7281017_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 376.0
BYD3_k127_7281836_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 2.923e-221 689.0
BYD3_k127_7281836_1 PFAM Extradiol ring-cleavage dioxygenase, class III K04101 - 1.13.11.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 348.0
BYD3_k127_7281836_2 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000003783 280.0
BYD3_k127_7281836_3 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000002227 59.0
BYD3_k127_7299194_0 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 351.0
BYD3_k127_7299194_1 SMP-30/Gluconolaconase/LRE-like region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001595 272.0
BYD3_k127_7299194_2 Class II Aldolase and Adducin N-terminal domain K22130 - 4.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000001517 265.0
BYD3_k127_7299194_3 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000002398 118.0
BYD3_k127_7299194_4 Putative sugar-binding N-terminal domain K21948 - 2.7.1.217 0.0000000000000001078 80.0
BYD3_k127_7299194_5 COG1593 TRAP-type C4-dicarboxylate transport system large permease component K11690 - - 0.000000001379 60.0
BYD3_k127_7299194_6 - - - - 0.0001545 47.0
BYD3_k127_7366916_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly - - - 0.0 1419.0
BYD3_k127_7366916_1 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007417 503.0
BYD3_k127_7366916_2 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 289.0
BYD3_k127_7366916_3 Cation efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002332 238.0
BYD3_k127_7366916_4 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000009903 231.0
BYD3_k127_7366916_5 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000002798 185.0
BYD3_k127_7366916_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000001496 78.0
BYD3_k127_7423746_0 Divalent cation transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004722 447.0
BYD3_k127_7423746_1 COG3119 Arylsulfatase A and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 431.0
BYD3_k127_7423746_2 Pirin C-terminal cupin domain K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 329.0
BYD3_k127_7423746_3 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 312.0
BYD3_k127_7423746_4 Phospholipase A1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 296.0
BYD3_k127_7423746_5 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002133 284.0
BYD3_k127_7423746_6 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000721 271.0
BYD3_k127_7423746_7 PFAM DoxX family protein K15977 - - 0.000000000000000000000000000000000000000000211 170.0
BYD3_k127_7423746_8 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000001363 130.0
BYD3_k127_744648_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1256.0
BYD3_k127_744648_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 549.0
BYD3_k127_744648_10 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000000002694 188.0
BYD3_k127_744648_11 Aminoacyl-tRNA editing domain K19055 - - 0.000000000000000000000000000000000000005067 154.0
BYD3_k127_744648_12 OmpA family K03286 - - 0.0000000000000000000000000008322 121.0
BYD3_k127_744648_13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000002217 64.0
BYD3_k127_744648_14 Tripartite tricarboxylate transporter family receptor - - - 0.0000003026 51.0
BYD3_k127_744648_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003834 519.0
BYD3_k127_744648_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 462.0
BYD3_k127_744648_4 chorismate mutase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006621 415.0
BYD3_k127_744648_5 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006685 391.0
BYD3_k127_744648_6 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006052 376.0
BYD3_k127_744648_7 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 339.0
BYD3_k127_744648_8 Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 295.0
BYD3_k127_744648_9 Phosphoglycolate phosphatase K22292 - 3.1.3.105 0.00000000000000000000000000000000000000000000000000000000000000000000348 241.0
BYD3_k127_7498676_0 Belongs to the DapA family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 393.0
BYD3_k127_7498676_1 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004103 375.0
BYD3_k127_7498676_2 Dehydrogenase K15054 - 1.1.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 373.0
BYD3_k127_7498676_3 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004819 310.0
BYD3_k127_7498676_4 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000001565 204.0
BYD3_k127_7498676_5 Rhodanese Homology Domain - - - 0.000000000000000000000000003572 117.0
BYD3_k127_7535173_0 III protein, CoA-transferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 505.0
BYD3_k127_7535173_1 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 325.0
BYD3_k127_7535173_2 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 299.0
BYD3_k127_7535173_3 PFAM CHRD domain containing protein - - - 0.0000000000000000000000000000000005595 135.0
BYD3_k127_7536919_0 DNA helicase K03657 - 3.6.4.12 2.784e-297 927.0
BYD3_k127_7536919_1 Aminotransferase class-III K01845 - 5.4.3.8 7.741e-221 691.0
BYD3_k127_7536919_10 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 302.0
BYD3_k127_7536919_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 293.0
BYD3_k127_7536919_12 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006368 263.0
BYD3_k127_7536919_13 Acid phosphatase homologues K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000055 164.0
BYD3_k127_7536919_14 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000000000000116 160.0
BYD3_k127_7536919_2 TIGRFAM phosphate binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 502.0
BYD3_k127_7536919_3 phosphate transport system K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 476.0
BYD3_k127_7536919_4 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 474.0
BYD3_k127_7536919_5 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000803 439.0
BYD3_k127_7536919_6 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 430.0
BYD3_k127_7536919_7 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 400.0
BYD3_k127_7536919_8 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006941 402.0
BYD3_k127_7536919_9 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 353.0
BYD3_k127_7547146_0 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 469.0
BYD3_k127_7547146_1 Fumarylacetoacetate (FAA) hydrolase family K02509 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 367.0
BYD3_k127_7547146_10 Endoribonuclease L-PSP - - - 0.000000000000000000000000000002133 130.0
BYD3_k127_7547146_11 alpha, beta - - - 0.000000000000000000000000000003323 132.0
BYD3_k127_7547146_12 CDGSH-type zinc finger. Function unknown. K09580 - 5.3.4.1 0.00000000000000000000000003099 110.0
BYD3_k127_7547146_13 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000004047 73.0
BYD3_k127_7547146_14 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.0000000000003409 76.0
BYD3_k127_7547146_2 Protein of unknown function (DUF3500) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 366.0
BYD3_k127_7547146_3 Tripartite ATP-independent periplasmic transporter, DctM component K11690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 359.0
BYD3_k127_7547146_4 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 331.0
BYD3_k127_7547146_5 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001293 299.0
BYD3_k127_7547146_6 ornithine cyclodeaminase K01750 - 4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000002428 275.0
BYD3_k127_7547146_7 Bacterial extracellular solute-binding protein, family 7 K11688 - - 0.000000000000000000000000000000000000000000001503 177.0
BYD3_k127_7547146_8 FCD - - - 0.00000000000000000000000000000000000000000004778 170.0
BYD3_k127_7547146_9 ChrR Cupin-like domain - - - 0.0000000000000000000000000000001366 133.0
BYD3_k127_7580785_0 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 605.0
BYD3_k127_7580785_1 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 379.0
BYD3_k127_7580785_2 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 304.0
BYD3_k127_7580785_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000033 281.0
BYD3_k127_7580785_4 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003882 233.0
BYD3_k127_7580785_5 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000008726 144.0
BYD3_k127_7602537_0 DNA segregation ATPase FtsK SpoIIIE K03466 - - 5.019e-295 923.0
BYD3_k127_7602537_1 RQC K03654 - 3.6.4.12 5.78e-262 820.0
BYD3_k127_7602537_10 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 544.0
BYD3_k127_7602537_11 transporter K02011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006275 549.0
BYD3_k127_7602537_12 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007719 528.0
BYD3_k127_7602537_13 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 520.0
BYD3_k127_7602537_14 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 495.0
BYD3_k127_7602537_15 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 484.0
BYD3_k127_7602537_16 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004201 487.0
BYD3_k127_7602537_17 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009525 481.0
BYD3_k127_7602537_18 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004478 480.0
BYD3_k127_7602537_19 epimerase dehydratase K22025 - 1.1.1.410 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 461.0
BYD3_k127_7602537_2 HELICc2 K03722 - 3.6.4.12 3.314e-230 736.0
BYD3_k127_7602537_20 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 463.0
BYD3_k127_7602537_21 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 429.0
BYD3_k127_7602537_22 Peptidogalycan biosysnthesis/recognition K09919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007581 420.0
BYD3_k127_7602537_23 PFAM Short-chain dehydrogenase reductase SDR K00023 - 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 400.0
BYD3_k127_7602537_24 DNA polymerase III, epsilon subunit K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 407.0
BYD3_k127_7602537_25 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007318 366.0
BYD3_k127_7602537_26 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 352.0
BYD3_k127_7602537_27 PFAM Short-chain dehydrogenase reductase SDR K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 336.0
BYD3_k127_7602537_28 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 340.0
BYD3_k127_7602537_29 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.1.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 327.0
BYD3_k127_7602537_3 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 5.469e-220 708.0
BYD3_k127_7602537_30 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 329.0
BYD3_k127_7602537_31 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000928 321.0
BYD3_k127_7602537_32 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006846 299.0
BYD3_k127_7602537_33 ZIP Zinc transporter K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007428 293.0
BYD3_k127_7602537_34 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000004303 264.0
BYD3_k127_7602537_35 Transcriptional regulator crp fnr family K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001049 255.0
BYD3_k127_7602537_36 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001176 265.0
BYD3_k127_7602537_37 synthesis repressor, PhaR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001204 252.0
BYD3_k127_7602537_38 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000001596 249.0
BYD3_k127_7602537_39 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.000000000000000000000000000000000000000000000000000000000000004717 223.0
BYD3_k127_7602537_4 Single-stranded-DNA-specific exonuclease RecJ K07462 - - 3.589e-215 682.0
BYD3_k127_7602537_40 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000000000000000000000198 220.0
BYD3_k127_7602537_41 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.000000000000000000000000000000000000000000000000000000000002153 220.0
BYD3_k127_7602537_42 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000001036 201.0
BYD3_k127_7602537_43 KR domain - - - 0.000000000000000000000000000000000000000000000000000004092 199.0
BYD3_k127_7602537_44 Protein of unknown function (DUF3025) - - - 0.00000000000000000000000000000000000000000000000006749 192.0
BYD3_k127_7602537_45 Small MutS-related domain - - - 0.0000000000000000000000000000000000000000001906 164.0
BYD3_k127_7602537_46 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000006199 168.0
BYD3_k127_7602537_47 DNA repair - GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0032259,GO:0034641,GO:0036260,GO:0036261,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071164,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.000000000000000000000000000000000000000008113 175.0
BYD3_k127_7602537_48 BON domain - - - 0.0000000000000000000000000000000000000001569 165.0
BYD3_k127_7602537_49 Bacterial type II and III secretion system protein - - - 0.0000000000000000000000000000000000000002231 161.0
BYD3_k127_7602537_5 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 9.383e-206 649.0
BYD3_k127_7602537_50 Cyclophilin-like K09143 - - 0.000000000000000000000000000000000008344 144.0
BYD3_k127_7602537_51 HIRAN - - - 0.00000000000000000000000000000002811 134.0
BYD3_k127_7602537_52 Glycine zipper 2TM domain - - - 0.0000000000000000000000000009492 122.0
BYD3_k127_7602537_53 Tetratricopeptide repeat - - - 0.000000000000000000000000001186 121.0
BYD3_k127_7602537_54 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000485 111.0
BYD3_k127_7602537_55 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000021 113.0
BYD3_k127_7602537_56 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000003989 108.0
BYD3_k127_7602537_57 - - - - 0.000000000000000001988 93.0
BYD3_k127_7602537_58 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000002114 91.0
BYD3_k127_7602537_59 Diguanylate cyclase - - - 0.000000004019 64.0
BYD3_k127_7602537_6 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 1.015e-199 632.0
BYD3_k127_7602537_60 KTSC domain - - - 0.000000005089 63.0
BYD3_k127_7602537_62 - - - - 0.0005298 45.0
BYD3_k127_7602537_7 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000611 623.0
BYD3_k127_7602537_8 DNA replication, recombination, and repair K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 596.0
BYD3_k127_7602537_9 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005551 591.0
BYD3_k127_7612232_0 Flavin containing amine oxidoreductase - - - 6.058e-227 715.0
BYD3_k127_7612232_1 Glycine cleavage T-protein C-terminal barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004049 455.0
BYD3_k127_7612232_2 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K05816,K10111,K10112 - 3.6.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 453.0
BYD3_k127_7612232_3 probably responsible for the translocation of the substrate across the membrane K02026,K05815 - - 0.00000000000000000000000000000000000000000000000000000000007196 205.0
BYD3_k127_7612232_4 Thi4 family - - - 0.000001698 59.0
BYD3_k127_7621969_0 L-lactate dehydrogenase K00101,K00104 - 1.1.2.3,1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 530.0
BYD3_k127_7621969_1 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 514.0
BYD3_k127_7621969_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 335.0
BYD3_k127_7621969_3 Luciferase-like monooxygenase K14733 - 1.14.13.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 302.0
BYD3_k127_7657421_0 PFAM FAD dependent oxidoreductase - - - 1.151e-202 642.0
BYD3_k127_7657421_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 537.0
BYD3_k127_7657421_10 - - - - 0.0000000000000000000000000000000000000000000000000000000009659 209.0
BYD3_k127_7657421_11 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000006379 208.0
BYD3_k127_7657421_12 membrane transporter protein K07090 - - 0.00000000000000000000000000000000001155 145.0
BYD3_k127_7657421_13 polyketide cyclase - - - 0.00000000000000000000000000001919 121.0
BYD3_k127_7657421_14 oxidation-reduction process - - - 0.00000000000000000000000000277 123.0
BYD3_k127_7657421_15 - - - - 0.000000000000000000000004509 106.0
BYD3_k127_7657421_2 DNA repair photolyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 449.0
BYD3_k127_7657421_3 Putative serine dehydratase domain K18425 - 4.1.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 413.0
BYD3_k127_7657421_4 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 390.0
BYD3_k127_7657421_5 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 362.0
BYD3_k127_7657421_6 PFAM multi antimicrobial extrusion protein MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000995 353.0
BYD3_k127_7657421_7 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 328.0
BYD3_k127_7657421_8 NUDIX hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 302.0
BYD3_k127_7657421_9 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005124 275.0
BYD3_k127_7669795_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 494.0
BYD3_k127_7669795_1 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007564 319.0
BYD3_k127_7669795_2 Methionine synthase - - - 0.0000000000000000000000000000000000000004424 154.0
BYD3_k127_779777_0 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 3.903e-218 691.0
BYD3_k127_779777_1 Amino acid adenylation enzyme thioester reductase family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 523.0
BYD3_k127_779777_10 Thioesterase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003596 259.0
BYD3_k127_779777_11 endonuclease III K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000005879 245.0
BYD3_k127_779777_12 Class II aldolase K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000002385 231.0
BYD3_k127_779777_13 Male sterility protein K22025 - 1.1.1.410 0.0000000000000000000000000000000000000000000000000000000000000001124 232.0
BYD3_k127_779777_14 Belongs to the P-Pant transferase superfamily K06133 - - 0.000000000000000000000000000000000001429 153.0
BYD3_k127_779777_15 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000005722 132.0
BYD3_k127_779777_16 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000008442 101.0
BYD3_k127_779777_17 bacterial (prokaryotic) histone like domain K03530 - - 0.00000000000000000001176 94.0
BYD3_k127_779777_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 509.0
BYD3_k127_779777_3 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 506.0
BYD3_k127_779777_4 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 495.0
BYD3_k127_779777_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006218 398.0
BYD3_k127_779777_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 377.0
BYD3_k127_779777_7 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 310.0
BYD3_k127_779777_8 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003001 289.0
BYD3_k127_779777_9 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007817 267.0
BYD3_k127_7798829_0 Amidohydrolase K10221 - 3.1.1.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 307.0
BYD3_k127_7798829_1 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000627 302.0
BYD3_k127_7798829_2 Polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000148 270.0
BYD3_k127_7798829_3 DinB family - - - 0.0000000000000000000001006 99.0
BYD3_k127_7798829_4 Cupin domain - - - 0.000000000000000000001377 98.0
BYD3_k127_7798829_5 PFAM Cupin 2 conserved barrel domain protein - - - 0.00000005602 57.0
BYD3_k127_7805195_0 PFAM extracellular solute-binding protein family 1 K05813 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 354.0
BYD3_k127_7805195_1 Glutathione peroxidase K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000001282 188.0
BYD3_k127_7807724_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 3.078e-302 962.0
BYD3_k127_7807724_1 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 2.543e-287 893.0
BYD3_k127_7807724_10 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly K13643 - - 0.00000000000000000000000000000000000000000000000000000000000000002697 226.0
BYD3_k127_7807724_11 LysR substrate binding domain K10972 - - 0.0000000000000000000000000000000000000000000000000000000000004306 223.0
BYD3_k127_7807724_12 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000000000000000000000000000000001065 214.0
BYD3_k127_7807724_13 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.000000000000000000000000000000000000000000000000002717 188.0
BYD3_k127_7807724_14 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000002008 181.0
BYD3_k127_7807724_15 Belongs to the ompA family K03286 - - 0.0000000000000000000000002938 114.0
BYD3_k127_7807724_2 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 2.667e-210 662.0
BYD3_k127_7807724_3 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 454.0
BYD3_k127_7807724_4 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 442.0
BYD3_k127_7807724_5 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 390.0
BYD3_k127_7807724_6 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 351.0
BYD3_k127_7807724_7 TIGRFAM Serine O-acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005222 293.0
BYD3_k127_7807724_8 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002475 283.0
BYD3_k127_7807724_9 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.00000000000000000000000000000000000000000000000000000000000000000001058 234.0
BYD3_k127_7810544_0 FAD dependent oxidoreductase - - - 3.471e-292 921.0
BYD3_k127_7810544_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005172 429.0
BYD3_k127_7810544_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001812 246.0
BYD3_k127_785152_0 of ABC transporters with duplicated ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004694 469.0
BYD3_k127_785152_1 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.0000000000000000000000000000000000000008231 156.0
BYD3_k127_785152_2 SMART Cold shock protein K03704 - - 0.000000000000000000000000000038 122.0
BYD3_k127_785152_3 Protein conserved in bacteria - - - 0.000000000000057 74.0
BYD3_k127_7909760_0 protein related to plant photosystem II stability assembly factor - - - 7.504e-204 647.0
BYD3_k127_7909760_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 362.0
BYD3_k127_7909760_2 AcrB/AcrD/AcrF family K03296,K18138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007604 294.0
BYD3_k127_7909760_3 UPF0126 domain - - - 0.0000000000000000000000000000000000000000000000000000004695 200.0
BYD3_k127_7909760_4 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000008735 145.0
BYD3_k127_7909760_5 ThiS family K03636 - - 0.000000000000000000000000005546 120.0
BYD3_k127_7968293_0 Branched-chain amino acid transport system / permease component K11961 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 502.0
BYD3_k127_7968293_1 Urea ABC transporter ATP-binding protein urtd K11962 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 369.0
BYD3_k127_7968293_2 ABC transporter, ATP-binding protein K11963 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009048 350.0
BYD3_k127_7968293_3 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007411 265.0
BYD3_k127_7968293_4 Belongs to the urease gamma subunit family K01430 - 3.5.1.5 0.00000000000000000000000000000000000000000000000002234 179.0
BYD3_k127_8013793_0 KaiC K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981 588.0
BYD3_k127_8013793_1 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 581.0
BYD3_k127_8013793_10 phytoene K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 321.0
BYD3_k127_8013793_11 Permeases of the drug metabolite transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000838 295.0
BYD3_k127_8013793_12 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 288.0
BYD3_k127_8013793_13 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000009195 202.0
BYD3_k127_8013793_14 Glycoprotease family K14742 - - 0.000000000000000000000000000000000000000000000000000000004094 205.0
BYD3_k127_8013793_15 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000293 205.0
BYD3_k127_8013793_16 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000009523 196.0
BYD3_k127_8013793_17 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000005741 209.0
BYD3_k127_8013793_18 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000008112 166.0
BYD3_k127_8013793_19 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000000000000000004715 148.0
BYD3_k127_8013793_2 Tartrate dehydrogenase K07246 - 1.1.1.83,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 561.0
BYD3_k127_8013793_3 Major Facilitator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008572 507.0
BYD3_k127_8013793_4 Tartrate dehydrogenase K07246 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.83,1.1.1.93,4.1.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007751 485.0
BYD3_k127_8013793_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 469.0
BYD3_k127_8013793_6 Phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 396.0
BYD3_k127_8013793_7 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007322 383.0
BYD3_k127_8013793_8 squalene-associated FAD-dependent desaturase K21677 - 1.17.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004847 350.0
BYD3_k127_8013793_9 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 339.0
BYD3_k127_8076292_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0 1540.0
BYD3_k127_8076292_1 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749,K14471,K14472 - 2.8.3.16,2.8.3.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006816 499.0
BYD3_k127_8076292_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000005453 166.0
BYD3_k127_8076292_11 AraC-like ligand binding domain - - - 0.0000000000000000000000000000000000006799 150.0
BYD3_k127_8076292_12 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000001421 144.0
BYD3_k127_8076292_13 Histidine kinase - - - 0.0000000000000000000000000000001748 129.0
BYD3_k127_8076292_14 response regulator, receiver - - - 0.0000000000000000001746 99.0
BYD3_k127_8076292_15 Two component transcriptional regulator, LuxR family - - - 0.0000000000000009321 82.0
BYD3_k127_8076292_16 histidine kinase HAMP region domain protein - - - 0.000000000000007237 87.0
BYD3_k127_8076292_17 Predicted membrane protein (DUF2214) K08983 - - 0.00000000000001752 76.0
BYD3_k127_8076292_18 - - - - 0.0006473 47.0
BYD3_k127_8076292_2 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 483.0
BYD3_k127_8076292_3 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 357.0
BYD3_k127_8076292_4 Maleate cis-trans isomerase K01799 - 5.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 300.0
BYD3_k127_8076292_5 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000005906 221.0
BYD3_k127_8076292_6 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000003179 214.0
BYD3_k127_8076292_7 helix_turn_helix, Lux Regulon K14979 - - 0.0000000000000000000000000000000000000000000000000000000009801 215.0
BYD3_k127_8076292_8 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000001872 189.0
BYD3_k127_8076292_9 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000000000000000000000004147 173.0
BYD3_k127_8147690_0 PFAM Sulfatase K01130 - 3.1.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 535.0
BYD3_k127_8147690_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006367 525.0
BYD3_k127_8147690_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000774 256.0
BYD3_k127_8147690_3 Domain of unknown function (DUF1992) - - - 0.000000000000000000299 100.0
BYD3_k127_8147690_4 COG0457 FOG TPR repeat - - - 0.00000000000000007001 81.0
BYD3_k127_8158335_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1415.0
BYD3_k127_8158335_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000000007086 235.0
BYD3_k127_8158335_2 response to abiotic stimulus K06867 - - 0.000000000000000000000000000000000000000000000000145 186.0
BYD3_k127_8158335_3 DJ-1/PfpI family - - - 0.0000000000000000000000000000003436 123.0
BYD3_k127_8158335_4 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.0000000000000000000000000000004394 134.0
BYD3_k127_8158335_5 NUDIX domain K01515 - 3.6.1.13 0.000000000001523 69.0
BYD3_k127_816722_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 1.9e-275 863.0
BYD3_k127_816722_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 4.13e-270 848.0
BYD3_k127_816722_10 Secretin and TonB N terminus short domain K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 552.0
BYD3_k127_816722_11 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006684 390.0
BYD3_k127_816722_12 hydrolase activity, acting on ester bonds K01561 - 3.8.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 371.0
BYD3_k127_816722_13 Type II secretion system (T2SS), protein F K02455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 371.0
BYD3_k127_816722_14 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 364.0
BYD3_k127_816722_15 protein histidine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 355.0
BYD3_k127_816722_16 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 305.0
BYD3_k127_816722_17 Cytochrome c-type biogenesis protein K02200 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003189 278.0
BYD3_k127_816722_18 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001151 267.0
BYD3_k127_816722_19 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001925 252.0
BYD3_k127_816722_2 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 1.052e-234 733.0
BYD3_k127_816722_20 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003808 248.0
BYD3_k127_816722_21 Redoxin K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000002354 231.0
BYD3_k127_816722_22 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000000002355 236.0
BYD3_k127_816722_23 oxidoreductase DsbE K02199 - - 0.0000000000000000000000000000000000000000000000000000000000000002353 231.0
BYD3_k127_816722_24 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000000000000000000003776 213.0
BYD3_k127_816722_25 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000000000000000000000001397 207.0
BYD3_k127_816722_26 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000000000000000000000001615 202.0
BYD3_k127_816722_27 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000001711 201.0
BYD3_k127_816722_28 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000000000000002353 195.0
BYD3_k127_816722_29 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000000000000000000000001576 205.0
BYD3_k127_816722_3 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 1.525e-220 698.0
BYD3_k127_816722_30 Type II secretory pathway pseudopilin - - - 0.000000000000000000000000000000000000000000000000151 181.0
BYD3_k127_816722_31 prepilin-type N-terminal cleavage methylation K02456 - - 0.00000000000000000000000000000000000000004673 160.0
BYD3_k127_816722_32 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000001084 155.0
BYD3_k127_816722_33 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.000000000000000000000000000000000000007676 165.0
BYD3_k127_816722_34 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000000000000000000000000002149 147.0
BYD3_k127_816722_35 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.00000000000000000000000000000000000003915 154.0
BYD3_k127_816722_36 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000000005539 146.0
BYD3_k127_816722_37 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000002129 137.0
BYD3_k127_816722_38 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000007701 128.0
BYD3_k127_816722_39 - - - - 0.00000000000000000000000000003789 126.0
BYD3_k127_816722_4 Aminotransferase class I and II K14261 - - 1.065e-219 691.0
BYD3_k127_816722_40 PFAM response regulator receiver - - - 0.0000000000000000000000001043 111.0
BYD3_k127_816722_41 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.00000000000000000005268 93.0
BYD3_k127_816722_42 protein conserved in bacteria K09937 - - 0.000000000000000002371 86.0
BYD3_k127_816722_43 Pilus assembly protein, PilO - - - 0.000000000000000006889 91.0
BYD3_k127_816722_44 - - - - 0.0000000001675 69.0
BYD3_k127_816722_45 - - - - 0.00000001611 66.0
BYD3_k127_816722_46 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015886,GO:0016020,GO:0031224,GO:0031226,GO:0031235,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098552,GO:0098562,GO:1901678 - 0.00006045 46.0
BYD3_k127_816722_48 HflC and HflK could regulate a protease K04087 - - 0.0008195 42.0
BYD3_k127_816722_5 Cysteine-rich domain - - - 6.442e-211 670.0
BYD3_k127_816722_6 homoserine dehydrogenase K00003 - 1.1.1.3 1.192e-201 636.0
BYD3_k127_816722_7 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 614.0
BYD3_k127_816722_8 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 610.0
BYD3_k127_816722_9 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 590.0
BYD3_k127_8180049_0 Sulfatase - - - 1.695e-243 761.0
BYD3_k127_8180049_1 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal domain K18983 - 5.5.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 442.0
BYD3_k127_8180049_2 Pfam Sulfatase K01133 - 3.1.6.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 336.0
BYD3_k127_8180049_3 PFAM conserved - - - 0.00000000000000000000000000000000000005027 147.0
BYD3_k127_8186251_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 541.0
BYD3_k127_8186251_1 VanZ like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003679 275.0
BYD3_k127_8186251_2 Alpha beta K07018 - - 0.000000000000000000000000000000000000000000000000000000000001762 213.0
BYD3_k127_8186251_3 Ferredoxin - - - 0.000000000000000000000000000000000000000000000001654 174.0
BYD3_k127_8186251_4 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.00000000000000000000001518 102.0
BYD3_k127_8194308_0 Glutathione S-transferase, C-terminal domain K07393 - 1.8.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 366.0
BYD3_k127_8194308_1 MltA-interacting protein MipA K07274 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 357.0
BYD3_k127_8194308_2 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000001138 232.0
BYD3_k127_8194308_3 KR domain K00065 - 1.1.1.127 0.00000000000000000000000000000000000000000000000000000000000000007086 224.0
BYD3_k127_8210753_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1120.0
BYD3_k127_8210753_1 mannitol 2-dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 457.0
BYD3_k127_8210753_10 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.000000000000000000000000000000007444 134.0
BYD3_k127_8210753_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 425.0
BYD3_k127_8210753_3 Amino acid polyamine organocation transporter, APC superfamily K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 417.0
BYD3_k127_8210753_4 LysR substrate binding domain protein K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 387.0
BYD3_k127_8210753_5 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 384.0
BYD3_k127_8210753_6 carbohydrate transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004556 263.0
BYD3_k127_8210753_7 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000003812 191.0
BYD3_k127_8210753_8 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000968 190.0
BYD3_k127_8210753_9 regulatory protein GntR HTH - - - 0.00000000000000000000000000000000000000002689 161.0
BYD3_k127_8229864_0 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 325.0
BYD3_k127_8229864_1 Glycine zipper - - - 0.00000000000000000000000000000000000000000000002892 176.0
BYD3_k127_8229864_2 histidine kinase A domain protein - - - 0.0000000000000000001121 94.0
BYD3_k127_8229864_3 Tripartite tricarboxylate transporter family receptor - - - 0.00004567 47.0
BYD3_k127_8232431_0 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 539.0
BYD3_k127_8232431_1 PFAM MotA TolQ ExbB proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 313.0
BYD3_k127_8232431_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000005847 233.0
BYD3_k127_8232431_3 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000000000008466 189.0
BYD3_k127_8232431_4 TonB C terminal K03646 - - 0.000000000000000000000000000000000001656 149.0
BYD3_k127_8232431_5 Biopolymer transport protein ExbD TolR K03560 - - 0.00000000000000000000000000000002261 132.0
BYD3_k127_8232431_6 PFAM thioesterase superfamily protein K07107 - - 0.0000000000000000000000000000003831 128.0
BYD3_k127_8232431_7 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000005892 62.0
BYD3_k127_8233025_0 COG1951 Tartrate dehydratase alpha subunit Fumarate hydratase class I, N-terminal domain K01677,K03779 - 4.2.1.2,4.2.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000001237 258.0
BYD3_k127_8233025_1 beta-keto acid cleavage enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000001592 217.0
BYD3_k127_8233025_2 Fumarase C-terminus K03780 - 4.2.1.32 0.000000000000000000000000000000000000000000000000000007534 200.0
BYD3_k127_8233025_3 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000002966 152.0
BYD3_k127_8233025_4 dehydratase, subunit alpha K03779 - 4.2.1.32 0.00002906 54.0
BYD3_k127_827853_0 3-hydroxyanthranilic acid dioxygenase K00452 GO:0000334,GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0044237,GO:0044248,GO:0051213,GO:0055114 1.13.11.6 0.00000000000000000000000000000000000000000000000000000000000000005169 235.0
BYD3_k127_827853_1 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000003932 192.0
BYD3_k127_8312791_0 TIGRFAM glutamine synthetase, type I K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 1.786e-242 755.0
BYD3_k127_8312791_1 Belongs to the malate synthase family K01638 - 2.3.3.9 5.321e-240 752.0
BYD3_k127_8312791_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 1.495e-215 677.0
BYD3_k127_8312791_3 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008642 494.0
BYD3_k127_8312791_4 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004881 395.0
BYD3_k127_8312791_5 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 333.0
BYD3_k127_8312791_6 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000001354 183.0
BYD3_k127_8312791_7 Participates in the degradation of poly-3- hydroxybutyrate (PHB). It works downstream of poly(3- hydroxybutyrate) depolymerase, hydrolyzing D(-)-3-hydroxybutyrate oligomers of various length (3HB-oligomers) into 3HB-monomers K07518 - 3.1.1.22 0.00000000000000000000000000000000000000002165 160.0
BYD3_k127_8312791_8 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000004075 116.0
BYD3_k127_8312791_9 - - - - 0.00000000000000001283 87.0
BYD3_k127_8329947_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0 1149.0
BYD3_k127_8329947_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 613.0
BYD3_k127_8329947_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 515.0
BYD3_k127_8329947_3 Histidine kinase K20974 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 456.0
BYD3_k127_8329947_4 - - - - 0.0000000000000000003676 87.0
BYD3_k127_8329947_5 Protein of unknown function (DUF3617) - - - 0.000001723 55.0
BYD3_k127_8329947_6 Protein of unknown function (DUF3617) - - - 0.000009275 52.0
BYD3_k127_8333900_0 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 415.0
BYD3_k127_8333900_1 Esterase PHB depolymerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 360.0
BYD3_k127_8333900_2 copG family - - - 0.000000000000000000000000000000000000000000000001285 177.0
BYD3_k127_8333900_3 Ring hydroxylating subunit beta family protein 1 - - - 0.0000000000000000000000000000001745 130.0
BYD3_k127_8333900_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000003531 100.0
BYD3_k127_835287_0 SpoVR like protein K06415 - - 8.123e-204 642.0
BYD3_k127_835287_1 Protein of unknown function (DUF444) K09786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 428.0
BYD3_k127_835287_2 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 328.0
BYD3_k127_835287_3 - - - - 0.000001858 54.0
BYD3_k127_8454611_0 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 7.764e-268 842.0
BYD3_k127_8454611_1 chain 5 L K00341 - 1.6.5.3 6.371e-258 812.0
BYD3_k127_8454611_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 4.475e-231 727.0
BYD3_k127_8454611_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009173 524.0
BYD3_k127_8454611_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000924 299.0
BYD3_k127_8454611_5 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000006313 239.0
BYD3_k127_8454611_6 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000003538 186.0
BYD3_k127_8454611_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000000003289 164.0
BYD3_k127_8508409_0 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009923 388.0
BYD3_k127_8508409_1 Pfam SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000002105 229.0
BYD3_k127_8508409_2 - - - - 0.00000000005845 66.0
BYD3_k127_8510666_0 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 0.0 3188.0
BYD3_k127_8535659_0 PFAM fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 518.0
BYD3_k127_8535659_1 Crp-like helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412 355.0
BYD3_k127_8535659_2 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 338.0
BYD3_k127_8535659_3 Phospholipase A1 K01058 - 3.1.1.32,3.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001085 281.0
BYD3_k127_8535659_4 Crp-like helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000003522 220.0
BYD3_k127_8535659_5 PFAM binding-protein-dependent transport systems inner membrane component K02050,K15554 - - 0.000000000000000000000000000000000000000000001426 173.0
BYD3_k127_8535659_6 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000001488 166.0
BYD3_k127_8535659_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000006364 137.0
BYD3_k127_8535659_8 - - - - 0.00000000000000000003596 94.0
BYD3_k127_8606427_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1155.0
BYD3_k127_8606427_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0 1056.0
BYD3_k127_8606427_2 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 4.135e-195 625.0
BYD3_k127_8606427_3 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 299.0
BYD3_k127_8606427_4 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000002639 252.0
BYD3_k127_8606427_5 cytochrome c K17223 - - 0.0000000000000000000000000000000000000000000004334 171.0
BYD3_k127_8606427_6 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000812 162.0
BYD3_k127_8606427_7 sulfur oxidation protein (SoxY) K17226 - - 0.000000000000000000000000000000000000000009292 164.0
BYD3_k127_8606427_8 Sulphur oxidation protein SoxZ - - - 0.000000000000000000000000000000000000001091 153.0
BYD3_k127_8606427_9 Glycine cleavage system T protein K00605 - 2.1.2.10 0.00000000000000000000000000000000006404 139.0
BYD3_k127_8634216_0 Pfam:KaiC K08482 - - 5.667e-221 699.0
BYD3_k127_8634216_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007791 540.0
BYD3_k127_8634216_10 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006725 300.0
BYD3_k127_8634216_11 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006893 246.0
BYD3_k127_8634216_12 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002316 257.0
BYD3_k127_8634216_13 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000001539 242.0
BYD3_k127_8634216_14 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000002119 238.0
BYD3_k127_8634216_15 Protein of unknown function (DUF3455) - - - 0.0000000000000000000000000000000000000000000009862 175.0
BYD3_k127_8634216_16 Globin - - - 0.000000000000000000000000000000000000000004153 162.0
BYD3_k127_8634216_17 KaiB K08481 - - 0.000000000000000000000000000000000000004298 147.0
BYD3_k127_8634216_18 SWI complex, BAF60b domains - - - 0.0000000000000000000000000000000001367 136.0
BYD3_k127_8634216_19 PAS domain - - - 0.00000000002698 74.0
BYD3_k127_8634216_2 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 465.0
BYD3_k127_8634216_3 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 448.0
BYD3_k127_8634216_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 421.0
BYD3_k127_8634216_5 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 416.0
BYD3_k127_8634216_6 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004012 409.0
BYD3_k127_8634216_7 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 351.0
BYD3_k127_8634216_8 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 320.0
BYD3_k127_8634216_9 response regulator receiver K07659 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 296.0
BYD3_k127_8763699_0 DEAD/H associated K03724 - - 7.097e-273 866.0
BYD3_k127_8763699_1 Rieske [2Fe-2S] domain - - - 1.846e-203 640.0
BYD3_k127_8763699_10 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008823 308.0
BYD3_k127_8763699_11 lytic transglycosylase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000864 284.0
BYD3_k127_8763699_12 FtsJ-like methyltransferase K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000008491 221.0
BYD3_k127_8763699_13 glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000002015 200.0
BYD3_k127_8763699_14 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000002065 181.0
BYD3_k127_8763699_2 glutamine synthetase K01915 - 6.3.1.2 6.822e-194 619.0
BYD3_k127_8763699_3 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007051 605.0
BYD3_k127_8763699_4 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 578.0
BYD3_k127_8763699_5 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 507.0
BYD3_k127_8763699_6 Aldo/keto reductase family K05275 - 1.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000668 440.0
BYD3_k127_8763699_7 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 413.0
BYD3_k127_8763699_8 Pfam Cupin K00450,K11948 - 1.13.11.38,1.13.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 335.0
BYD3_k127_8763699_9 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 328.0
BYD3_k127_8785848_0 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 421.0
BYD3_k127_8785848_1 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000000000001005 199.0
BYD3_k127_8792639_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 551.0
BYD3_k127_8792639_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 453.0
BYD3_k127_8792639_2 chorismate mutase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 419.0
BYD3_k127_8792639_3 Prephenate dehydrogenase K00210,K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000003457 245.0
BYD3_k127_8792639_4 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000006592 202.0
BYD3_k127_8792639_5 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000007997 139.0
BYD3_k127_8792639_6 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000001227 68.0
BYD3_k127_8797099_0 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006582 286.0
BYD3_k127_8797099_1 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000001385 233.0
BYD3_k127_8797099_2 paraquat-inducible protein A K03808 - - 0.0000000000000000000000000000000000000001172 158.0
BYD3_k127_8797099_3 Thioesterase superfamily - - - 0.000000000000000000000000002062 124.0
BYD3_k127_8797099_4 - - - - 0.0002722 51.0
BYD3_k127_8797099_5 MlaD protein - - - 0.0007044 46.0
BYD3_k127_8811471_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 430.0
BYD3_k127_8811471_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000852 370.0
BYD3_k127_8811471_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004943 371.0
BYD3_k127_8811471_3 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000009839 203.0
BYD3_k127_8811471_4 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000002415 96.0
BYD3_k127_8816443_0 AcrB/AcrD/AcrF family K03296,K18138 - - 2.919e-208 660.0
BYD3_k127_8816443_1 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 530.0
BYD3_k127_8816443_10 - - - - 0.00000001037 59.0
BYD3_k127_8816443_11 Protein of unknown function (DUF2934) - - - 0.0000001827 59.0
BYD3_k127_8816443_2 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 472.0
BYD3_k127_8816443_3 Outer membrane efflux protein K18139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 395.0
BYD3_k127_8816443_4 Molecular chaperone K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 335.0
BYD3_k127_8816443_5 PFAM Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000001469 218.0
BYD3_k127_8816443_6 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000001533 164.0
BYD3_k127_8816443_7 Thioesterase - - - 0.0000000000000000000000000000000001913 137.0
BYD3_k127_8816443_8 Prokaryotic dksA/traR C4-type zinc finger - - - 0.00000000000000000000001328 109.0
BYD3_k127_8816443_9 Heavy metal transport detoxification protein K07213 - - 0.000000000000001992 79.0
BYD3_k127_8842918_0 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 7.488e-271 837.0
BYD3_k127_8842918_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006309 565.0
BYD3_k127_8842918_2 Formate nitrite K02598,K06212 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 331.0
BYD3_k127_8842918_3 Cytochrome C oxidase, mono-heme subunit/FixO K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 327.0
BYD3_k127_8842918_4 FixH family K09926 - - 0.0000000000000000000000000000000003487 141.0
BYD3_k127_8842918_5 - - - - 0.0000000000000298 79.0
BYD3_k127_8842918_7 Adenylate cyclase K01768 - 4.6.1.1 0.0000413 53.0
BYD3_k127_8842918_8 Cbb3-type cytochrome oxidase K00407 - - 0.0009594 44.0
BYD3_k127_8853693_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 379.0
BYD3_k127_8853693_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 370.0
BYD3_k127_8853693_2 Luciferase-like monooxygenase K15854 - 1.14.14.3 0.0000000000000000000000000000000000000000000000000000000000002257 230.0
BYD3_k127_8861233_0 Penicillin-binding protein 2 K05515 - 3.4.16.4 2.269e-251 792.0
BYD3_k127_8861233_1 Catalyzes the reversible formation of glyoxylate and succinate from isocitrate K01637 - 4.1.3.1 1.891e-220 691.0
BYD3_k127_8861233_10 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 494.0
BYD3_k127_8861233_11 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 480.0
BYD3_k127_8861233_12 Belongs to the methyltransferase superfamily K07444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 436.0
BYD3_k127_8861233_13 PFAM ABC transporter related K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 415.0
BYD3_k127_8861233_14 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 365.0
BYD3_k127_8861233_15 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000423 364.0
BYD3_k127_8861233_16 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 349.0
BYD3_k127_8861233_17 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 344.0
BYD3_k127_8861233_18 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008728 324.0
BYD3_k127_8861233_19 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 288.0
BYD3_k127_8861233_2 twitching motility protein K02670 - - 3.156e-207 651.0
BYD3_k127_8861233_20 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000001926 273.0
BYD3_k127_8861233_21 PFAM ABC-2 type transporter K09694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004595 262.0
BYD3_k127_8861233_22 Alpha beta K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004786 244.0
BYD3_k127_8861233_23 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007934 246.0
BYD3_k127_8861233_24 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000008312 246.0
BYD3_k127_8861233_25 lipid kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000001598 217.0
BYD3_k127_8861233_26 Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000000000002465 199.0
BYD3_k127_8861233_27 rod shape-determining protein MreD K03571 - - 0.0000000000000000000000000000000000000000002247 164.0
BYD3_k127_8861233_28 Ferredoxin - - - 0.000000000000000000000000000000000000000005223 155.0
BYD3_k127_8861233_29 integral membrane protein K02221 - - 0.0000000000000000000000000000000000000000157 161.0
BYD3_k127_8861233_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.916e-206 651.0
BYD3_k127_8861233_30 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000002347 115.0
BYD3_k127_8861233_31 - - - - 0.00000000000000000001717 101.0
BYD3_k127_8861233_32 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.00000000000000000006486 91.0
BYD3_k127_8861233_33 Belongs to the UPF0235 family K09131 - - 0.00000000000000001122 92.0
BYD3_k127_8861233_34 - - - - 0.00008031 55.0
BYD3_k127_8861233_4 Rod shape-determining protein MreB K03569 - - 1.653e-202 633.0
BYD3_k127_8861233_5 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 1.187e-195 631.0
BYD3_k127_8861233_6 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000782 608.0
BYD3_k127_8861233_7 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 602.0
BYD3_k127_8861233_8 Major facilitator superfamily K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 602.0
BYD3_k127_8861233_9 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 570.0
BYD3_k127_8905874_0 ABC-type Fe3 transport system, permease component K02011 - - 1.242e-219 699.0
BYD3_k127_8905874_1 Circularly permuted ATP-grasp type 2 - - - 1.148e-207 654.0
BYD3_k127_8905874_10 TOBE domain - - - 0.00000000000000000000000000000000000000000000000001173 184.0
BYD3_k127_8905874_11 - K07395 - - 0.00000000000000000000000000008275 116.0
BYD3_k127_8905874_2 Domain of unknown function (DUF3482) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 474.0
BYD3_k127_8905874_3 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 425.0
BYD3_k127_8905874_4 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 343.0
BYD3_k127_8905874_5 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007948 313.0
BYD3_k127_8905874_6 transglutaminase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001732 296.0
BYD3_k127_8905874_7 N-formylglutamate amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005207 271.0
BYD3_k127_8905874_8 Protein of unknown function (DUF2868) - - - 0.000000000000000000000000000000000000000000000000000000000000000000003801 254.0
BYD3_k127_8905874_9 Pfam:Pyridox_oxidase K07006 - - 0.00000000000000000000000000000000000000000000000000001492 195.0
BYD3_k127_8939755_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.06e-307 949.0
BYD3_k127_8939755_1 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 1.666e-266 848.0
BYD3_k127_8939755_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008774 317.0
BYD3_k127_8939755_11 S-adenosylmethionine-dependent methyltransferase, YraL family K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000342 229.0
BYD3_k127_8939755_12 HAD-superfamily hydrolase K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000009997 229.0
BYD3_k127_8939755_13 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000002402 208.0
BYD3_k127_8939755_14 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000003155 187.0
BYD3_k127_8939755_15 Low molecular weight phosphotyrosine protein phosphatase K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.0000000000000000000000000000000000000000003967 179.0
BYD3_k127_8939755_16 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000003204 135.0
BYD3_k127_8939755_17 rieske 2fe-2s - - - 0.000000000000000000000000000000001134 135.0
BYD3_k127_8939755_18 Cell Wall Hydrolase - - - 0.000000000000000000000000003196 118.0
BYD3_k127_8939755_19 metal-binding, possibly nucleic acid-binding protein K07040 - - 0.0000000000000000000000006998 113.0
BYD3_k127_8939755_2 COG0017 Aspartyl asparaginyl-tRNA synthetases K01893 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 1.696e-210 662.0
BYD3_k127_8939755_20 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000004658 102.0
BYD3_k127_8939755_21 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.00000000000000000000002936 106.0
BYD3_k127_8939755_3 catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-acp K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 1.595e-196 619.0
BYD3_k127_8939755_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 442.0
BYD3_k127_8939755_5 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 429.0
BYD3_k127_8939755_6 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 394.0
BYD3_k127_8939755_7 malonyl CoA-acyl carrier protein transacylase K00645,K15355 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 384.0
BYD3_k127_8939755_8 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 349.0
BYD3_k127_8939755_9 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 334.0
BYD3_k127_9018228_0 Urease alpha-subunit, N-terminal domain K01428 - 3.5.1.5 2.798e-307 949.0
BYD3_k127_9018228_1 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 348.0
BYD3_k127_9018228_2 of the double-stranded beta helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003042 267.0
BYD3_k127_9018228_3 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000002465 224.0
BYD3_k127_9018228_4 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.000000000000000000000000000000000000000000000000000000000000003989 224.0
BYD3_k127_9018228_5 Belongs to the urease beta subunit family K01429 - 3.5.1.5 0.00000000000000000000000000000000000000000000002174 172.0
BYD3_k127_9018228_6 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000005974 160.0
BYD3_k127_9018228_7 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.0000000000000000000000000000002118 134.0
BYD3_k127_93859_0 Transport of potassium into the cell K03549 - - 8.132e-272 848.0
BYD3_k127_93859_1 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter MnhD subunit K05568 - - 1.149e-206 659.0
BYD3_k127_93859_10 COG1863 Multisubunit Na H antiporter MnhE subunit K05569 - - 0.000000000000000000000000000000000000000000000002594 179.0
BYD3_k127_93859_11 COG1006 Multisubunit Na H antiporter, MnhC subunit K05567 - - 0.0000000000000000000000000000000000000000000131 166.0
BYD3_k127_93859_12 Multiple resistance and pH regulation protein F K05570 - - 0.000000000000000000000000000000659 125.0
BYD3_k127_93859_13 monovalent cation:proton antiporter activity K05571 - - 0.000000000000000000000000007229 123.0
BYD3_k127_93859_2 TrkA-N domain protein K03499 - - 1.523e-199 630.0
BYD3_k127_93859_3 Proton-conducting membrane transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005704 608.0
BYD3_k127_93859_4 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005584 575.0
BYD3_k127_93859_5 Proton-conducting membrane transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003592 531.0
BYD3_k127_93859_6 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 353.0
BYD3_k127_93859_7 Na H antiporter, MnhB K05566 - - 0.00000000000000000000000000000000000000000000000000000000003375 218.0
BYD3_k127_93859_8 Two component transcriptional regulator, LuxR family K13041 - - 0.000000000000000000000000000000000000000000000000000000007288 214.0
BYD3_k127_93859_9 Na H antiporter, MnhB K05566 - - 0.0000000000000000000000000000000000000000000000000003643 198.0
BYD3_k127_94916_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1383.0
BYD3_k127_94916_1 Formate--tetrahydrofolate ligase K01938 - 6.3.4.3 5.076e-281 872.0
BYD3_k127_94916_2 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00122 - 1.17.1.9 2.429e-239 751.0
BYD3_k127_94916_3 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009495 473.0
BYD3_k127_94916_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009077 422.0
BYD3_k127_94916_5 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 313.0
BYD3_k127_94916_6 membrane protein, terc - - - 0.000000000000000000000000000000000000000000000000000000000000000000007438 241.0
BYD3_k127_94916_7 Universal stress protein family - - - 0.000000000000000000000000000000003044 132.0
BYD3_k127_94916_8 Cupin domain - - - 0.00000000000000005406 82.0
BYD3_k127_978317_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 2.396e-242 758.0
BYD3_k127_978317_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 2.519e-210 662.0
BYD3_k127_978317_10 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006394 442.0
BYD3_k127_978317_11 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 418.0
BYD3_k127_978317_12 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 415.0
BYD3_k127_978317_13 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005721 372.0
BYD3_k127_978317_14 cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006139 364.0
BYD3_k127_978317_15 Peptidase family M23 K08259 - 3.4.24.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 313.0
BYD3_k127_978317_16 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.00000000000000000000000000000000000000000000000019 184.0
BYD3_k127_978317_17 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.00000000000000001643 89.0
BYD3_k127_978317_18 PAS fold - - - 0.000000000000002607 86.0
BYD3_k127_978317_19 Belongs to the MraZ family K03925 - - 0.000000000000006045 76.0
BYD3_k127_978317_2 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 1.779e-206 663.0
BYD3_k127_978317_20 Protein of unknown function (DUF721) - - - 0.0002242 50.0
BYD3_k127_978317_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 615.0
BYD3_k127_978317_4 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007699 577.0
BYD3_k127_978317_5 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 493.0
BYD3_k127_978317_6 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 479.0
BYD3_k127_978317_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 463.0
BYD3_k127_978317_8 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 459.0
BYD3_k127_978317_9 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 459.0
BYD3_k127_99304_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K13482 - 1.17.1.4 1.487e-267 848.0
BYD3_k127_99304_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 2.093e-232 728.0
BYD3_k127_99304_10 CoA binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 453.0
BYD3_k127_99304_11 Urate oxidase N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 443.0
BYD3_k127_99304_12 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 425.0
BYD3_k127_99304_13 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000683 400.0
BYD3_k127_99304_14 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006294 419.0
BYD3_k127_99304_15 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 396.0
BYD3_k127_99304_16 Xanthine dehydrogenase small subunit K13481 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 389.0
BYD3_k127_99304_17 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 358.0
BYD3_k127_99304_18 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006566 343.0
BYD3_k127_99304_19 Belongs to the GST superfamily K11209 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 309.0
BYD3_k127_99304_2 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830,K00839 - 2.6.1.112,2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 567.0
BYD3_k127_99304_20 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 315.0
BYD3_k127_99304_21 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000001785 259.0
BYD3_k127_99304_22 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001204 260.0
BYD3_k127_99304_23 Acts on guanine, xanthine and to a lesser extent hypoxanthine K00769 - 2.4.2.22 0.000000000000000000000000000000000000000000000000000000000000000000000001482 260.0
BYD3_k127_99304_24 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000319 225.0
BYD3_k127_99304_25 - - - - 0.00000000000000000000000000000000000000000000000000000000000001227 228.0
BYD3_k127_99304_26 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family - - - 0.00000000000000000000000000000000000000000000000000000000008851 213.0
BYD3_k127_99304_27 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000000001331 205.0
BYD3_k127_99304_28 Xanthine dehydrogenase accessory protein XdhC K07402 - - 0.000000000000000000000000000000000000000001971 175.0
BYD3_k127_99304_29 Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily K07127 - 3.5.2.17 0.0000000000000000000000000000000000000008378 151.0
BYD3_k127_99304_3 Protein of unknown function (DUF1116) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009861 574.0
BYD3_k127_99304_30 Polysaccharide deacetylase K00365,K01452 GO:0000003,GO:0000272,GO:0003006,GO:0005575,GO:0005618,GO:0005619,GO:0005623,GO:0005631,GO:0005975,GO:0005976,GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006037,GO:0006039,GO:0006040,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009272,GO:0009277,GO:0009653,GO:0009987,GO:0010383,GO:0010927,GO:0016043,GO:0016052,GO:0016998,GO:0017144,GO:0019953,GO:0022402,GO:0022411,GO:0022413,GO:0022414,GO:0022607,GO:0030154,GO:0030312,GO:0030435,GO:0030437,GO:0030476,GO:0031160,GO:0031505,GO:0032502,GO:0032505,GO:0032989,GO:0034218,GO:0034232,GO:0034293,GO:0042244,GO:0042546,GO:0042737,GO:0043170,GO:0043934,GO:0043935,GO:0044036,GO:0044085,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044277,GO:0044426,GO:0044462,GO:0044464,GO:0044703,GO:0045229,GO:0046348,GO:0048468,GO:0048646,GO:0048856,GO:0048869,GO:0051321,GO:0051704,GO:0070590,GO:0070591,GO:0070726,GO:0070910,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071853,GO:0071854,GO:0071940,GO:0071944,GO:0071966,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903046 1.7.3.3,3.5.1.41 0.0000000000000000000000000000000001427 151.0
BYD3_k127_99304_31 HIUase/Transthyretin family - - - 0.0000000000000000000000000000000002583 135.0
BYD3_k127_99304_32 Protein of unknown function (DUF2877) - - - 0.0000000000000000000000000000000003642 141.0
BYD3_k127_99304_33 membrane - - - 0.0000000000000000000000000001574 119.0
BYD3_k127_99304_34 Protein of unknown function (DUF1232) - - - 0.0000000000000000000000009875 111.0
BYD3_k127_99304_4 FAD binding domain K00481 - 1.14.13.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009113 564.0
BYD3_k127_99304_5 Soluble lytic murein transglycosylase L domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000682 565.0
BYD3_k127_99304_6 COG1680 Beta-lactamase class C and other penicillin binding proteins K01286,K08641 - 3.4.13.22,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 521.0
BYD3_k127_99304_7 NMT1/THI5 like K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 489.0
BYD3_k127_99304_8 Peptidase family M28 K02083 - 3.5.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 483.0
BYD3_k127_99304_9 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 512.0