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Overview

ID MAG00118
Name BYD3_bin.31
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Blastocatellia
Order Pyrinomonadales
Family Pyrinomonadaceae
Genus PSRF01
Species
Assembly information
Completeness (%) 83.25
Contamination (%) 5.57
GC content (%) 56.0
N50 (bp) 16,929
Genome size (bp) 4,503,548

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3446

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1003191_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1183.0
BYD3_k127_1003191_1 Belongs to the PEP-utilizing enzyme family K01006,K01007 - 2.7.9.1,2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 597.0
BYD3_k127_1003191_2 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007387 309.0
BYD3_k127_1003191_3 Pyridoxal-dependent decarboxylase conserved domain K00486,K01593 - 1.14.13.9,4.1.1.105,4.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006549 298.0
BYD3_k127_1003191_4 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.0000000000000000000000000000000000000000000000000001488 198.0
BYD3_k127_1003191_5 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000004368 110.0
BYD3_k127_1003191_6 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765,K02502 - 2.4.2.17 0.00008087 49.0
BYD3_k127_1017827_0 TonB dependent receptor - - - 1.674e-204 683.0
BYD3_k127_1017827_1 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 498.0
BYD3_k127_1017827_10 Tetratricopeptide repeat - - - 0.0005741 52.0
BYD3_k127_1017827_2 virion core protein (lumpy skin disease virus) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 404.0
BYD3_k127_1017827_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 297.0
BYD3_k127_1017827_4 ABC transporter related K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005087 281.0
BYD3_k127_1017827_5 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001879 267.0
BYD3_k127_1017827_6 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000006669 175.0
BYD3_k127_1017827_7 Methyltransferase domain - - - 0.0000000000000000000000000000000000001565 151.0
BYD3_k127_1017827_8 FAD binding domain K21401 - 1.3.99.38 0.0000000000000000000000000000000000002054 156.0
BYD3_k127_1017827_9 VanZ like family - - - 0.000000000000000000000000001305 117.0
BYD3_k127_1031180_0 glycosyl transferase group 1 K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 415.0
BYD3_k127_1031180_1 Elongation factor SelB, winged helix K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 328.0
BYD3_k127_1031180_2 iron-sulfur cluster assembly - - - 0.00000000000000000000000000000000000000000000000000000239 196.0
BYD3_k127_1068123_0 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 561.0
BYD3_k127_1068123_1 PFAM TonB-dependent Receptor Plug - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 318.0
BYD3_k127_1068123_2 amine dehydrogenase activity K00504,K12132 - 1.14.17.3,2.7.11.1 0.00000000000000000000000000000000004458 150.0
BYD3_k127_1068123_3 Carboxypeptidase regulatory-like domain - - - 0.00008835 48.0
BYD3_k127_1068123_4 TonB-dependent receptor - - - 0.0006531 44.0
BYD3_k127_1098464_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 499.0
BYD3_k127_1098464_1 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005998 402.0
BYD3_k127_1098464_2 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 382.0
BYD3_k127_1098464_3 Beta-lactamase K17836 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000007687 252.0
BYD3_k127_1098464_4 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000000000000009211 203.0
BYD3_k127_1098464_5 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000002809 145.0
BYD3_k127_1098464_6 peptidyl-tyrosine sulfation K03217,K06872 - - 0.000000000000000000000000000004451 132.0
BYD3_k127_1098464_7 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000692 67.0
BYD3_k127_1098464_8 Lysozyme inhibitor LprI - - - 0.000005466 49.0
BYD3_k127_1123126_0 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000383 174.0
BYD3_k127_1123126_1 Domain of unknown function (DUF4252) - - - 0.00000000000000000000000000000000001238 145.0
BYD3_k127_1123126_2 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000001369 145.0
BYD3_k127_1123126_3 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000007863 71.0
BYD3_k127_1123126_5 von Willebrand factor, type A - - - 0.00001031 57.0
BYD3_k127_1123126_6 - - - - 0.00001961 53.0
BYD3_k127_1123200_0 Secretion system protein K12511 - - 0.00000000000000000000000000000000000000000000000000002461 199.0
BYD3_k127_1123200_1 Type II secretion system K12510 - - 0.000000000000000000000001206 106.0
BYD3_k127_1123200_2 Tetratricopeptide TPR_2 repeat protein - - - 0.000000002999 68.0
BYD3_k127_1130918_0 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 475.0
BYD3_k127_1130918_1 Peptidase M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001918 283.0
BYD3_k127_1130918_2 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000005766 246.0
BYD3_k127_1130918_3 TIR domain - - - 0.0000000000000000000000000000005346 130.0
BYD3_k127_1130918_4 Pilus assembly protein PilX K02673 - - 0.000000000000003504 89.0
BYD3_k127_1130918_5 acylphosphatase activity K01512 - 3.6.1.7 0.00000000000009095 77.0
BYD3_k127_1177336_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0 1359.0
BYD3_k127_1177336_1 peroxiredoxin activity - - - 5.069e-296 918.0
BYD3_k127_1177336_2 electron transport chain K00347,K03614,K21163 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 356.0
BYD3_k127_1177336_3 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 370.0
BYD3_k127_1177336_4 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000008646 241.0
BYD3_k127_1177967_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.624e-221 701.0
BYD3_k127_1177967_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008801 553.0
BYD3_k127_1177967_2 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 379.0
BYD3_k127_1177967_3 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K07083,K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 345.0
BYD3_k127_1177967_4 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 298.0
BYD3_k127_1177967_5 AIR carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005525 282.0
BYD3_k127_1177967_6 peptidyl-tyrosine sulfation K03217,K06872 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008246 269.0
BYD3_k127_1177967_7 Lecithin:cholesterol acyltransferase - - - 0.000000000000000000000000000000000000000000000001167 192.0
BYD3_k127_1177967_8 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000006548 174.0
BYD3_k127_1180467_0 Glycosyl hydrolases family 39 K01198 - 3.2.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004921 593.0
BYD3_k127_1180467_1 Putative glucoamylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 564.0
BYD3_k127_1180467_10 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000004507 226.0
BYD3_k127_1180467_11 Glycosyl transferase, family 2 K07011 - - 0.0000000000000000000000000000000000000000000144 175.0
BYD3_k127_1180467_12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000004469 164.0
BYD3_k127_1180467_13 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000004272 168.0
BYD3_k127_1180467_14 Protein of unknown function (DUF1440) K08996 - - 0.000000000000000000000000000000008194 137.0
BYD3_k127_1180467_15 Protein of unknown function (DUF1176) - - - 0.00000000000000007566 91.0
BYD3_k127_1180467_16 Protein conserved in bacteria K09914 - - 0.00000000000003974 83.0
BYD3_k127_1180467_17 Belongs to the peptidase S1B family - - - 0.00002803 55.0
BYD3_k127_1180467_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007452 462.0
BYD3_k127_1180467_3 dioxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009448 437.0
BYD3_k127_1180467_4 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 409.0
BYD3_k127_1180467_5 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000782 399.0
BYD3_k127_1180467_6 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006443 383.0
BYD3_k127_1180467_7 Alpha-aspartyl dipeptidase-like K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001563 283.0
BYD3_k127_1180467_8 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000951 280.0
BYD3_k127_1180467_9 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000003421 263.0
BYD3_k127_1188567_0 efflux transmembrane transporter activity - - - 4.211e-221 708.0
BYD3_k127_1188567_1 Tricorn protease PDZ domain K08676 - - 2.759e-209 663.0
BYD3_k127_1188567_2 O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 598.0
BYD3_k127_119714_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 483.0
BYD3_k127_119714_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 471.0
BYD3_k127_119714_2 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 411.0
BYD3_k127_119714_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000562 322.0
BYD3_k127_119714_4 Formyl transferase K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000002182 240.0
BYD3_k127_119714_5 domain protein K02238 - - 0.0000000000000000000000000000000000000000000000000000000003963 214.0
BYD3_k127_119714_6 RDD family - - - 0.0000000000000000000000000000000000001081 152.0
BYD3_k127_1298322_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 531.0
BYD3_k127_1298322_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005731 446.0
BYD3_k127_1298322_10 - - - - 0.0000000000001996 74.0
BYD3_k127_1298322_11 DNA methylase - - - 0.0000009973 51.0
BYD3_k127_1298322_12 Major facilitator Superfamily - - - 0.00000223 53.0
BYD3_k127_1298322_2 PFAM peptidase M24 K01271 - 3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 404.0
BYD3_k127_1298322_3 Type ii and iii secretion system protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006004 388.0
BYD3_k127_1298322_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 345.0
BYD3_k127_1298322_5 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000006017 239.0
BYD3_k127_1298322_6 oxidoreductase activity - - - 0.0000000000000000000000000000001335 143.0
BYD3_k127_1298322_7 - - - - 0.0000000000000000000003781 98.0
BYD3_k127_1298322_8 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000602 90.0
BYD3_k127_1298322_9 DNA methylase - - - 0.00000000000000002959 84.0
BYD3_k127_130114_0 Acyl transferase domain in polyketide synthase (PKS) enzymes. K12444 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009273,GO:0009987,GO:0016020,GO:0016043,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0030312,GO:0032787,GO:0032991,GO:0034081,GO:0042546,GO:0043436,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071554,GO:0071704,GO:0071766,GO:0071770,GO:0071840,GO:0071944,GO:0072330,GO:1901576 - 0.0 1258.0
BYD3_k127_130114_1 Beta-ketoacyl synthase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 634.0
BYD3_k127_130114_10 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002369 276.0
BYD3_k127_130114_11 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001855 273.0
BYD3_k127_130114_12 PFAM O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001506 249.0
BYD3_k127_130114_13 AMP-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001518 243.0
BYD3_k127_130114_14 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000004289 209.0
BYD3_k127_130114_15 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000004197 198.0
BYD3_k127_130114_16 - - - - 0.000000000000000000000000000000000000000000004263 179.0
BYD3_k127_130114_17 methyltransferase - GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0009273,GO:0009987,GO:0016020,GO:0016043,GO:0016740,GO:0016741,GO:0022607,GO:0032259,GO:0042546,GO:0044085,GO:0044464,GO:0071554,GO:0071766,GO:0071770,GO:0071840,GO:0071944 - 0.000000000000000000000000000000000000000003948 166.0
BYD3_k127_130114_18 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000009139 142.0
BYD3_k127_130114_19 PFAM MbtH domain protein K05375 - - 0.000000000000000000000000000000003708 131.0
BYD3_k127_130114_2 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000677 576.0
BYD3_k127_130114_20 MbtH-like protein K05375 - - 0.00000000000000000000000000000006889 125.0
BYD3_k127_130114_21 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.00000000000000000000000000001864 127.0
BYD3_k127_130114_22 tryptophan 2,3-dioxygenase activity K00453 - 1.13.11.11 0.00000000000000000000000001473 124.0
BYD3_k127_130114_23 of nitrite reductase and ring-hydroxylating K05710 - - 0.0000000000000000000000005137 107.0
BYD3_k127_130114_24 Transcription termination factor nusG - - - 0.0000000000000000000000009413 111.0
BYD3_k127_130114_25 - - - - 0.00000000000000000000004018 102.0
BYD3_k127_130114_26 - - - - 0.000000000001088 70.0
BYD3_k127_130114_3 cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 399.0
BYD3_k127_130114_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 362.0
BYD3_k127_130114_5 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 354.0
BYD3_k127_130114_6 PFAM Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000538 319.0
BYD3_k127_130114_7 cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 316.0
BYD3_k127_130114_8 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005363 315.0
BYD3_k127_130114_9 PFAM O-methyltransferase, family 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007697 267.0
BYD3_k127_1304918_0 Belongs to the ClpA ClpB family K03696 - - 7.242e-269 837.0
BYD3_k127_1304918_1 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007983 414.0
BYD3_k127_1304918_10 Histidine kinase-like ATPase domain - - - 0.0000000000000000000000000000000000004698 151.0
BYD3_k127_1304918_11 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0001427 48.0
BYD3_k127_1304918_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001412 280.0
BYD3_k127_1304918_3 Subtilase family K14645 GO:0005575,GO:0005576 - 0.0000000000000000000000000000000000000000000000000000000000000000002053 243.0
BYD3_k127_1304918_4 lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000259 241.0
BYD3_k127_1304918_5 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000001483 236.0
BYD3_k127_1304918_6 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000003026 196.0
BYD3_k127_1304918_7 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000000000000000000000005047 182.0
BYD3_k127_1304918_8 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000002333 171.0
BYD3_k127_1304918_9 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.000000000000000000000000000000000000000006419 163.0
BYD3_k127_1306640_0 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 455.0
BYD3_k127_1306640_1 Belongs to the pyruvate kinase family K00873 GO:0001871,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2001065 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 405.0
BYD3_k127_1306640_10 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000002073 80.0
BYD3_k127_1306640_11 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000004857 90.0
BYD3_k127_1306640_13 protein N-acetylglucosaminyltransferase activity - - - 0.0009972 45.0
BYD3_k127_1306640_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006957 266.0
BYD3_k127_1306640_3 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000006749 210.0
BYD3_k127_1306640_4 HD domain K07023 - - 0.0000000000000000000000000000000000006058 149.0
BYD3_k127_1306640_5 - - - - 0.000000000000000000000000000000000921 131.0
BYD3_k127_1306640_6 - - - - 0.000000000000000000000000002618 116.0
BYD3_k127_1306640_7 Domain of unknown function (DUF4258) - - - 0.00000000000000000000000001144 111.0
BYD3_k127_1306640_8 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000168 109.0
BYD3_k127_1306640_9 Cyclic nucleotide-monophosphate binding domain K10914 - - 0.00000000000000000000002939 108.0
BYD3_k127_1309035_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 449.0
BYD3_k127_1309035_1 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006401 355.0
BYD3_k127_1309035_10 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000001239 180.0
BYD3_k127_1309035_11 tRNA threonylcarbamoyladenosine modification K06925,K07102 - 2.7.1.221 0.0000000000000000000000000000000000001782 147.0
BYD3_k127_1309035_12 Lytic transglycosylase catalytic K08309 - - 0.00000000000000000000000000000000008056 154.0
BYD3_k127_1309035_13 Glycoprotease family K01409,K14742 - 2.3.1.234 0.0002703 51.0
BYD3_k127_1309035_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006762 332.0
BYD3_k127_1309035_3 Copper binding periplasmic protein CusF K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001063 280.0
BYD3_k127_1309035_4 extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000296 287.0
BYD3_k127_1309035_5 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003544 271.0
BYD3_k127_1309035_6 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001296 279.0
BYD3_k127_1309035_7 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001022 273.0
BYD3_k127_1309035_8 L-threonylcarbamoyladenylate synthase K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000005207 231.0
BYD3_k127_1309035_9 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000001277 235.0
BYD3_k127_1309266_0 Glycoside hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 574.0
BYD3_k127_1309266_1 PhoQ Sensor K07640 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000672 300.0
BYD3_k127_1309266_2 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.0000000000000000000000000000002156 133.0
BYD3_k127_1309266_3 cellulose binding - - - 0.000000000000000000000000005997 111.0
BYD3_k127_1319551_0 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 1.147e-201 639.0
BYD3_k127_1319551_1 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 593.0
BYD3_k127_1319551_2 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004696 587.0
BYD3_k127_1319551_3 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 394.0
BYD3_k127_1328649_0 domain protein - - - 0.0 1083.0
BYD3_k127_1328649_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.579e-296 927.0
BYD3_k127_1328649_10 Putative serine dehydratase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000613 410.0
BYD3_k127_1328649_11 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 419.0
BYD3_k127_1328649_12 protein involved in virulence - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 403.0
BYD3_k127_1328649_13 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009604 380.0
BYD3_k127_1328649_14 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007873 382.0
BYD3_k127_1328649_15 Aspartyl protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 353.0
BYD3_k127_1328649_16 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 349.0
BYD3_k127_1328649_17 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002857 275.0
BYD3_k127_1328649_18 Protein conserved in bacteria K20274 - - 0.000000000000000000000000000000000000000000000000000000000000000000108 265.0
BYD3_k127_1328649_19 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000003861 233.0
BYD3_k127_1328649_2 PFAM Glycosyl hydrolase family 3 C terminal domain - - - 3.794e-266 840.0
BYD3_k127_1328649_20 PFAM OsmC family protein K04063 - - 0.000000000000000000000000000000000000000000000001399 178.0
BYD3_k127_1328649_21 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000002587 184.0
BYD3_k127_1328649_22 - - - - 0.0000000000000000000000000000000000000000000004595 189.0
BYD3_k127_1328649_23 extracellular matrix structural constituent K02035 - - 0.0000000000000000000000000000000000000000000006975 193.0
BYD3_k127_1328649_24 polysaccharide catabolic process K03478 - 3.5.1.105 0.000000000000000000000000000000000000000001903 159.0
BYD3_k127_1328649_25 PFAM YdjC family protein K03478 - 3.5.1.105 0.000000000000000000000000000000000000002692 151.0
BYD3_k127_1328649_26 - - - - 0.00000000000000000000000000000000000000701 146.0
BYD3_k127_1328649_27 DinB superfamily K07552 - - 0.00000000000000000000000000000000000003308 149.0
BYD3_k127_1328649_28 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000001806 150.0
BYD3_k127_1328649_29 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000003255 142.0
BYD3_k127_1328649_3 Putative carbohydrate binding domain K12373 - 3.2.1.52 6.652e-240 759.0
BYD3_k127_1328649_30 hydroperoxide reductase activity K01607 - 4.1.1.44 0.0000000000000000000000000000000001985 133.0
BYD3_k127_1328649_31 TPR repeat - - - 0.00000000000000000000000000505 125.0
BYD3_k127_1328649_33 - - - - 0.000000000000000000003164 98.0
BYD3_k127_1328649_34 amine dehydrogenase activity K20276 - - 0.0000000000000000001039 106.0
BYD3_k127_1328649_35 RHS Repeat - - - 0.00003131 54.0
BYD3_k127_1328649_36 Transcription termination factor nusG - - - 0.0003014 47.0
BYD3_k127_1328649_4 ASPIC and UnbV - - - 2.661e-225 711.0
BYD3_k127_1328649_5 ASPIC and UnbV - - - 4.029e-198 632.0
BYD3_k127_1328649_6 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 459.0
BYD3_k127_1328649_7 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005505 456.0
BYD3_k127_1328649_8 Lactonase, 7-bladed beta-propeller K07404 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 418.0
BYD3_k127_1328649_9 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007535 421.0
BYD3_k127_1378865_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 2.102e-194 614.0
BYD3_k127_1378865_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009702 573.0
BYD3_k127_1378865_10 TonB C terminal K03832 - - 0.0008344 51.0
BYD3_k127_1378865_2 Transporter-associated region K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 437.0
BYD3_k127_1378865_3 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 437.0
BYD3_k127_1378865_4 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 339.0
BYD3_k127_1378865_5 CarD-like/TRCF domain K07736 - - 0.00000000000000000000000000000000000001248 151.0
BYD3_k127_1378865_6 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000582 135.0
BYD3_k127_1378865_7 Glycosyl transferases group 1 - - - 0.00000000002672 76.0
BYD3_k127_1378865_8 phosphorelay signal transduction system - - - 0.00000001026 66.0
BYD3_k127_1378865_9 self proteolysis - - - 0.00003788 55.0
BYD3_k127_1381515_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 564.0
BYD3_k127_1381515_1 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 506.0
BYD3_k127_1381515_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004505 321.0
BYD3_k127_1381515_3 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004406 293.0
BYD3_k127_1381515_4 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000008302 238.0
BYD3_k127_1381515_5 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000005918 158.0
BYD3_k127_1381515_6 Fe2 transport system protein A K04758 - - 0.0000000002953 68.0
BYD3_k127_1384294_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 401.0
BYD3_k127_1384294_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 363.0
BYD3_k127_1384294_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000001232 252.0
BYD3_k127_1384294_3 Imidazoleglycerol-phosphate dehydratase K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000001856 232.0
BYD3_k127_1384294_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000006046 226.0
BYD3_k127_1384294_5 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000003333 179.0
BYD3_k127_1384294_6 belongs to the PRA-CH family K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000001807 172.0
BYD3_k127_1385360_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 328.0
BYD3_k127_1385360_1 response regulator K07685 - - 0.00000000000000000000000000000000000000000000000273 181.0
BYD3_k127_1389055_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1296.0
BYD3_k127_1389055_1 UDP binding domain K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 568.0
BYD3_k127_1389055_10 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.00000000000000000000000000000000000000000000000000006055 198.0
BYD3_k127_1389055_11 - - - - 0.000000003035 63.0
BYD3_k127_1389055_12 Domain of unknown function (DUF4383) - - - 0.000000005943 63.0
BYD3_k127_1389055_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007934 483.0
BYD3_k127_1389055_3 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 437.0
BYD3_k127_1389055_4 NAD(P)H-binding K01784,K02473 - 5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 353.0
BYD3_k127_1389055_5 Belongs to the aldehyde dehydrogenase family K00128,K00146 - 1.2.1.3,1.2.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000001598 271.0
BYD3_k127_1389055_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000179 245.0
BYD3_k127_1389055_7 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000563 232.0
BYD3_k127_1389055_8 ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000008499 201.0
BYD3_k127_1389055_9 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000000000000003692 191.0
BYD3_k127_13991_0 PFAM MgtC SapB transporter K07507 - - 0.00000000000000000000000000000000000000001236 158.0
BYD3_k127_13991_1 Uncharacterized conserved protein (DUF2277) - - - 0.0000000000000000000000000000000000781 135.0
BYD3_k127_13991_2 HEAT repeats - - - 0.0000000000000000000000002518 121.0
BYD3_k127_13991_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000004247 82.0
BYD3_k127_13991_4 Putative zinc-finger - - - 0.000525 51.0
BYD3_k127_1502247_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004604 615.0
BYD3_k127_1502247_1 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005353 415.0
BYD3_k127_1502247_2 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002805 246.0
BYD3_k127_1502247_3 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000002614 237.0
BYD3_k127_1502247_4 Thioesterase K07107,K12073 - 3.1.2.28 0.000000000000000000642 91.0
BYD3_k127_1565121_0 Malate synthase K01638 - 2.3.3.9 4.904e-222 699.0
BYD3_k127_1565121_1 Isocitrate lyase K01637 - 4.1.3.1 1.664e-203 642.0
BYD3_k127_1565121_10 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000003418 160.0
BYD3_k127_1565121_11 pectinesterase activity - - - 0.000000000000000000000000000000000001188 147.0
BYD3_k127_1565121_12 pectinesterase activity - - - 0.000001943 49.0
BYD3_k127_1565121_2 efflux transmembrane transporter activity - - - 6.374e-203 662.0
BYD3_k127_1565121_3 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004709 466.0
BYD3_k127_1565121_4 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 355.0
BYD3_k127_1565121_5 Protein of unknown function (DUF1003) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003994 270.0
BYD3_k127_1565121_6 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.0000000000000000000000000000000000000000000000000000000000000006126 229.0
BYD3_k127_1565121_7 Aminotransferase K10907 - - 0.0000000000000000000000000000000000000000000000000000000001952 217.0
BYD3_k127_1565121_8 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000013 208.0
BYD3_k127_1565121_9 Transcriptional regulator K13641 - - 0.000000000000000000000000000000000000000000001408 175.0
BYD3_k127_157620_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 5.676e-288 910.0
BYD3_k127_157620_1 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000007835 248.0
BYD3_k127_157620_2 methyltransferase - - - 0.000000000000000009102 93.0
BYD3_k127_157620_3 Domain of unknown function (DUF4440) - - - 0.000000000000009259 81.0
BYD3_k127_1627583_0 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 347.0
BYD3_k127_1627583_1 MOSC N-terminal beta barrel domain K07140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001605 270.0
BYD3_k127_1627583_2 Alkyl hydroperoxide reductase K03564 - 1.11.1.15 0.0007838 48.0
BYD3_k127_1629377_0 Nucleotidyl transferase K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007577 546.0
BYD3_k127_1629377_1 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 535.0
BYD3_k127_1629377_10 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000002613 227.0
BYD3_k127_1629377_11 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000000000000000008779 212.0
BYD3_k127_1629377_12 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000007716 189.0
BYD3_k127_1629377_13 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000003875 173.0
BYD3_k127_1629377_14 galactose-6-phosphate isomerase activity K00761,K01808 - 2.4.2.9,5.3.1.6 0.00000000000000000000000000000000000000001738 163.0
BYD3_k127_1629377_15 TonB dependent receptor K16087 - - 0.00000000000000000000000000000000001353 157.0
BYD3_k127_1629377_16 - - - - 0.00000000000000000000000000000000002618 145.0
BYD3_k127_1629377_17 metallopeptidase activity - - - 0.0000000000000000000000000000000001723 142.0
BYD3_k127_1629377_18 5'-nucleotidase, C-terminal domain K01081 - 3.1.3.5 0.000000000000000000000000004589 123.0
BYD3_k127_1629377_19 TIGRFAM VWFA-related Acidobacterial domain - - - 0.0000000000000000001165 102.0
BYD3_k127_1629377_2 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005222 461.0
BYD3_k127_1629377_20 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.0000000000000000002769 93.0
BYD3_k127_1629377_23 Carboxypeptidase regulatory-like domain - - - 0.00000664 60.0
BYD3_k127_1629377_24 Belongs to the peptidase M48B family - - - 0.00001073 53.0
BYD3_k127_1629377_3 dna ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009599 436.0
BYD3_k127_1629377_4 Ribonuclease HII K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 367.0
BYD3_k127_1629377_5 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007991 345.0
BYD3_k127_1629377_6 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 291.0
BYD3_k127_1629377_7 Molybdenum cofactor synthesis domain protein K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001449 280.0
BYD3_k127_1629377_8 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000001406 274.0
BYD3_k127_1629377_9 Phosphoribosyl transferase domain K00760,K15780 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.2.8,6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000002625 229.0
BYD3_k127_1638266_0 helix_turn_helix, Lux Regulon K03556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006086 525.0
BYD3_k127_1638266_1 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000544 449.0
BYD3_k127_1638266_2 COGs COG4299 conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009166 395.0
BYD3_k127_1638266_3 TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 331.0
BYD3_k127_1638266_4 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006447 301.0
BYD3_k127_1638266_5 ROK family - - - 0.00000000000000000000000000000000000000000000000000000000000007713 228.0
BYD3_k127_1638266_6 sequence-specific DNA binding - - - 0.0000000000006179 77.0
BYD3_k127_1638266_7 Helix-turn-helix domain - - - 0.000002502 54.0
BYD3_k127_1638266_8 IrrE N-terminal-like domain K01486 - 3.5.4.2 0.0001219 51.0
BYD3_k127_1638950_0 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) - - - 0.0 1109.0
BYD3_k127_1638950_1 Phage tail protein (Tail_P2_I) - - - 1.59e-258 829.0
BYD3_k127_1638950_10 GPW gp25 family protein K06903 - - 0.000000000000000000000000000000000000000000001393 168.0
BYD3_k127_1638950_12 - - - - 0.0000000000000000000000000002347 133.0
BYD3_k127_1638950_13 Competence protein ComEA K02237 - - 0.0001565 56.0
BYD3_k127_1638950_2 Baseplate J-like protein - - - 2.587e-256 811.0
BYD3_k127_1638950_3 ATPase family associated with various cellular activities (AAA) - - - 1.252e-213 685.0
BYD3_k127_1638950_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008741 439.0
BYD3_k127_1638950_5 Phage late control gene D protein (GPD) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 417.0
BYD3_k127_1638950_6 protein and some similarities with VgrG protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 379.0
BYD3_k127_1638950_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 356.0
BYD3_k127_1638950_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009034 309.0
BYD3_k127_1638950_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000016 235.0
BYD3_k127_1641322_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 468.0
BYD3_k127_1641322_1 Chaperone of endosialidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008401 322.0
BYD3_k127_1641322_2 Trypsin-like serine protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005314 279.0
BYD3_k127_1641322_3 cell wall surface anchor family protein - - - 0.000000000000000000000002585 119.0
BYD3_k127_1641322_4 histone H2A K63-linked ubiquitination K08884,K11894 - 2.7.11.1 0.0000000000007387 82.0
BYD3_k127_1641322_5 domain protein - - - 0.00005559 54.0
BYD3_k127_1674103_0 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 294.0
BYD3_k127_1674103_1 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000348 241.0
BYD3_k127_1674103_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000006799 210.0
BYD3_k127_1680796_0 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 287.0
BYD3_k127_1680796_1 PFAM Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007885 285.0
BYD3_k127_1680796_2 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000287 236.0
BYD3_k127_1680796_3 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000004981 121.0
BYD3_k127_1680796_4 ComF family K02242 - - 0.0000000000000000000000009712 113.0
BYD3_k127_1680796_5 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000000000001635 106.0
BYD3_k127_1680796_6 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000005339 76.0
BYD3_k127_1680796_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 GO:0008150,GO:0040007 - 0.00001321 49.0
BYD3_k127_1680796_8 ArsR family transcriptional regulator - - - 0.0003382 52.0
BYD3_k127_1687786_0 Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 2e-304 944.0
BYD3_k127_1687786_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 1.056e-236 749.0
BYD3_k127_1687786_10 COG1131 ABC-type multidrug transport system, ATPase component K01990,K19340 - - 0.00000000000000000000000000000000000000000004532 167.0
BYD3_k127_1687786_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 552.0
BYD3_k127_1687786_3 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 479.0
BYD3_k127_1687786_4 TIGRFAM parallel beta-helix repeat (two copies) K07218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 338.0
BYD3_k127_1687786_5 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 309.0
BYD3_k127_1687786_6 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.000000000000000000000000000000000000000000000000000000000002939 215.0
BYD3_k127_1687786_7 lipoprotein involved in nitrous oxide reduction - - - 0.0000000000000000000000000000000000000000000000000000000001311 210.0
BYD3_k127_1687786_8 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.0000000000000000000000000000000000000000000000001624 183.0
BYD3_k127_1687786_9 YwiC-like protein - - - 0.00000000000000000000000000000000000000000000000148 184.0
BYD3_k127_1689786_0 Large family of predicted nucleotide-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 354.0
BYD3_k127_1689786_1 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 338.0
BYD3_k127_1689786_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001812 245.0
BYD3_k127_1689786_3 - - - - 0.000000000000000000000000000000000000000000002829 168.0
BYD3_k127_1689786_4 Protein of unknown function, DUF393 - - - 0.0000000000000000000000000000007633 124.0
BYD3_k127_1689786_5 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000008026 119.0
BYD3_k127_1689786_6 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000729 102.0
BYD3_k127_1689786_7 - - - - 0.000000002303 67.0
BYD3_k127_1706918_0 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000002759 231.0
BYD3_k127_1706918_1 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000000002182 108.0
BYD3_k127_1706918_2 Protein of unknown function (DUF445) - - - 0.0000000000000000000007405 110.0
BYD3_k127_1710769_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 561.0
BYD3_k127_1710769_1 COG3621 Patatin K06900 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 401.0
BYD3_k127_1710769_10 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000001336 61.0
BYD3_k127_1710769_2 dna ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 371.0
BYD3_k127_1710769_3 dna ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008489 320.0
BYD3_k127_1710769_4 Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity K16038 GO:0002682,GO:0002684,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0009605,GO:0009607,GO:0016020,GO:0030312,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136 - 0.00000000000000000000000000000000000000000000000000000000000001722 224.0
BYD3_k127_1710769_5 DinB family - - - 0.0000000000000000000000000000000000000000000000000002912 189.0
BYD3_k127_1710769_6 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000003588 200.0
BYD3_k127_1710769_7 Patatin-like phospholipase K07001 - - 0.0000000000000000000000007363 107.0
BYD3_k127_1710769_8 HAMP domain - - - 0.000000000000002003 84.0
BYD3_k127_1710769_9 PLD-like domain - - - 0.000001204 60.0
BYD3_k127_1723616_0 efflux transmembrane transporter activity K02004 - - 7.508e-216 696.0
BYD3_k127_1723616_1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 1.099e-200 632.0
BYD3_k127_1723616_10 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000159 166.0
BYD3_k127_1723616_11 adenosylhomocysteinase activity K01251 - 3.3.1.1 0.00000000000000000000000000000000006236 150.0
BYD3_k127_1723616_12 Iron-sulfur cluster-binding domain K22227 - - 0.000000000000000000000000000000004773 147.0
BYD3_k127_1723616_13 Permease, YjgP YjgQ family K11720 - - 0.000000001566 64.0
BYD3_k127_1723616_14 - - - - 0.00000001604 63.0
BYD3_k127_1723616_15 Bardet-Biedl syndrome 4 K16531 GO:0000003,GO:0000226,GO:0000242,GO:0000278,GO:0000281,GO:0000910,GO:0001085,GO:0001103,GO:0001654,GO:0001750,GO:0001754,GO:0001764,GO:0001838,GO:0001841,GO:0001843,GO:0001894,GO:0001895,GO:0001917,GO:0001947,GO:0002009,GO:0003006,GO:0003007,GO:0003008,GO:0003013,GO:0003073,GO:0003085,GO:0003143,GO:0003352,GO:0003356,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005929,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007098,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0007600,GO:0007606,GO:0007608,GO:0007610,GO:0008015,GO:0008064,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008217,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009892,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010564,GO:0010605,GO:0010629,GO:0010638,GO:0010639,GO:0014020,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016331,GO:0016358,GO:0016462,GO:0016477,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019216,GO:0019221,GO:0019222,GO:0019953,GO:0021537,GO:0021543,GO:0021544,GO:0021591,GO:0021756,GO:0021761,GO:0021766,GO:0021915,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030534,GO:0030832,GO:0030833,GO:0030837,GO:0030900,GO:0031023,GO:0031090,GO:0031175,GO:0031253,GO:0031333,GO:0031344,GO:0031346,GO:0031514,GO:0031667,GO:0032095,GO:0032096,GO:0032098,GO:0032099,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032231,GO:0032271,GO:0032272,GO:0032391,GO:0032400,GO:0032401,GO:0032402,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032535,GO:0032870,GO:0032879,GO:0032886,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033059,GO:0033210,GO:0033365,GO:0034097,GO:0034260,GO:0034451,GO:0034452,GO:0034453,GO:0034454,GO:0034464,GO:0034504,GO:0034613,GO:0035050,GO:0035148,GO:0035176,GO:0035239,GO:0035295,GO:0035845,GO:0035869,GO:0036064,GO:0038108,GO:0040008,GO:0040011,GO:0040012,GO:0040014,GO:0040018,GO:0042221,GO:0042461,GO:0042462,GO:0042592,GO:0042995,GO:0043005,GO:0043009,GO:0043014,GO:0043086,GO:0043087,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043473,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044320,GO:0044321,GO:0044380,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045185,GO:0045444,GO:0045494,GO:0045724,GO:0045776,GO:0045927,GO:0046530,GO:0046548,GO:0046907,GO:0048232,GO:0048468,GO:0048487,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048562,GO:0048568,GO:0048583,GO:0048585,GO:0048592,GO:0048598,GO:0048609,GO:0048638,GO:0048639,GO:0048646,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048871,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050893,GO:0050896,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051270,GO:0051301,GO:0051302,GO:0051336,GO:0051346,GO:0051457,GO:0051492,GO:0051493,GO:0051494,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051651,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051705,GO:0051716,GO:0051726,GO:0051875,GO:0051904,GO:0051905,GO:0060170,GO:0060249,GO:0060255,GO:0060271,GO:0060295,GO:0060296,GO:0060322,GO:0060324,GO:0060429,GO:0060491,GO:0060562,GO:0060606,GO:0060612,GO:0060613,GO:0060632,GO:0061371,GO:0061448,GO:0061512,GO:0061640,GO:0065007,GO:0065008,GO:0065009,GO:0070491,GO:0070727,GO:0070887,GO:0070925,GO:0071310,GO:0071345,GO:0071495,GO:0071539,GO:0071840,GO:0071944,GO:0072175,GO:0072359,GO:0072393,GO:0072595,GO:0072698,GO:0080090,GO:0090066,GO:0090596,GO:0097458,GO:0097499,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098590,GO:0110020,GO:0110053,GO:0120025,GO:0120031,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:1902017,GO:1902019,GO:1902115,GO:1902117,GO:1902855,GO:1902903,GO:1902904,GO:1903047,GO:1903546,GO:1905508,GO:1905515,GO:2000145 - 0.00000001903 66.0
BYD3_k127_1723616_16 Pfam D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.0000000299 60.0
BYD3_k127_1723616_17 Transposase - - - 0.0000002242 56.0
BYD3_k127_1723616_18 Oxidoreductase activity. It is involved in the biological process described with oxidation-reduction process K03943 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007005,GO:0007275,GO:0007399,GO:0007507,GO:0008137,GO:0008150,GO:0008152,GO:0009055,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009888,GO:0009987,GO:0010257,GO:0014706,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0019866,GO:0022607,GO:0022900,GO:0022904,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032981,GO:0032991,GO:0033108,GO:0034622,GO:0034641,GO:0042773,GO:0042775,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0045333,GO:0046034,GO:0046483,GO:0048513,GO:0048731,GO:0048738,GO:0048856,GO:0050136,GO:0055086,GO:0055114,GO:0060537,GO:0065003,GO:0070469,GO:0071704,GO:0071840,GO:0072359,GO:0072521,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3,1.6.99.3 0.0000005342 57.0
BYD3_k127_1723616_19 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.000001582 49.0
BYD3_k127_1723616_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006225 568.0
BYD3_k127_1723616_3 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 547.0
BYD3_k127_1723616_4 phosphoesterase, PA-phosphatase related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 411.0
BYD3_k127_1723616_5 ABC transporter K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007029 367.0
BYD3_k127_1723616_6 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 300.0
BYD3_k127_1723616_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000899 304.0
BYD3_k127_1723616_8 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000003098 208.0
BYD3_k127_1723616_9 - - - - 0.000000000000000000000000000000000000000008474 161.0
BYD3_k127_1755641_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.181e-204 647.0
BYD3_k127_1755641_1 UPF0210 protein K09157 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005604 559.0
BYD3_k127_1755641_10 Carbon dioxide concentrating mechanism carboxysome shell protein - - - 0.000000000000000000000000000009213 123.0
BYD3_k127_1755641_11 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.00000000000000000000000000116 116.0
BYD3_k127_1755641_12 Belongs to the UPF0237 family K07166 - - 0.0000000000000000002917 93.0
BYD3_k127_1755641_13 Helix-turn-helix domain K15539 - - 0.0000000000007706 76.0
BYD3_k127_1755641_2 TIGRFAM acetaldehyde dehydrogenase (acetylating) K00132 - 1.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 457.0
BYD3_k127_1755641_3 protease with the C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 326.0
BYD3_k127_1755641_4 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 294.0
BYD3_k127_1755641_5 lipid kinase, YegS Rv2252 BmrU family - - - 0.00000000000000000000000000000000000000000000000000002002 199.0
BYD3_k127_1755641_6 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000003632 185.0
BYD3_k127_1755641_7 Low affinity iron permease - - - 0.0000000000000000000000000000000000000000000001656 172.0
BYD3_k127_1755641_8 BMC K04027 - - 0.00000000000000000000000000000000000005959 148.0
BYD3_k127_1755641_9 - - - - 0.000000000000000000000000000000000002865 142.0
BYD3_k127_1781134_0 Aldehyde oxidase and xanthine dehydrogenase a b hammerhead K03520,K11177 - 1.17.1.4,1.2.5.3 0.0 1313.0
BYD3_k127_1781134_1 Alpha/beta hydrolase family - - - 9.796e-292 906.0
BYD3_k127_1781134_10 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002954 254.0
BYD3_k127_1781134_11 Protein of unknown function (DUF1579) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003517 248.0
BYD3_k127_1781134_12 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002226 256.0
BYD3_k127_1781134_13 XdhC Rossmann domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002357 243.0
BYD3_k127_1781134_14 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000002236 237.0
BYD3_k127_1781134_15 XdhC and CoxI family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000006295 224.0
BYD3_k127_1781134_16 MobA-Related Protein K07141 - 2.7.7.76 0.0000000000000000000000000000000000000000001742 166.0
BYD3_k127_1781134_17 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.0000000000000000000000000000000000000000286 159.0
BYD3_k127_1781134_18 Protein of unknown function (DUF2975) - - - 0.000000000000000000000000000000002066 135.0
BYD3_k127_1781134_19 SUF system FeS assembly protein, NifU family K04488 - - 0.00000000000000000000000000002886 123.0
BYD3_k127_1781134_2 Sulfate permease family K01673,K03321 - 4.2.1.1 1.154e-202 645.0
BYD3_k127_1781134_20 - - - - 0.00000000000000000000000000003457 121.0
BYD3_k127_1781134_21 Cro/C1-type HTH DNA-binding domain - - - 0.000000000000000000000001299 108.0
BYD3_k127_1781134_22 - - - - 0.000000000000000000005024 99.0
BYD3_k127_1781134_23 Wd40 repeat-containing protein - - - 0.0000000000000000002595 100.0
BYD3_k127_1781134_24 Domain of unknown function (DUF4328) - - - 0.000000000000000001982 94.0
BYD3_k127_1781134_25 peroxiredoxin activity K03564 - 1.11.1.15 0.00000000000000103 80.0
BYD3_k127_1781134_26 peroxiredoxin activity K03564 - 1.11.1.15 0.00000000001872 67.0
BYD3_k127_1781134_27 Protein of unknown function (DUF1493) - - - 0.00000000006344 68.0
BYD3_k127_1781134_28 - - - - 0.0000001207 61.0
BYD3_k127_1781134_3 Citrate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005905 503.0
BYD3_k127_1781134_4 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00263 - 1.4.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 436.0
BYD3_k127_1781134_5 Associated with various cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 389.0
BYD3_k127_1781134_6 VWA domain containing CoxE-like protein K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 369.0
BYD3_k127_1781134_7 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008954 347.0
BYD3_k127_1781134_8 Protein of unknown function (DUF4256) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 316.0
BYD3_k127_1781134_9 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001022 283.0
BYD3_k127_1794472_0 FtsX-like permease family - - - 2.019e-213 703.0
BYD3_k127_1794472_1 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 608.0
BYD3_k127_1794472_10 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000002214 221.0
BYD3_k127_1794472_11 OsmC-like protein K07397 - - 0.00000000000000000000000000000000000000203 151.0
BYD3_k127_1794472_12 COGs COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM invasin domains) K08309 - - 0.00000000000000000000000001158 125.0
BYD3_k127_1794472_13 IMP dehydrogenase activity - - - 0.0000000000000000000000003166 109.0
BYD3_k127_1794472_14 - - - - 0.00000000000000000000001106 107.0
BYD3_k127_1794472_15 - - - - 0.000000000000000005772 94.0
BYD3_k127_1794472_16 Tetratricopeptide repeat K09527 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0030544,GO:0031072,GO:0051084,GO:0051085,GO:0061077 - 0.00000000002815 72.0
BYD3_k127_1794472_17 COG0500 SAM-dependent methyltransferases - - - 0.0000000002012 70.0
BYD3_k127_1794472_18 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000008881 55.0
BYD3_k127_1794472_2 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006367 552.0
BYD3_k127_1794472_3 COG0635 Coproporphyrinogen III oxidase and related Fe-S - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007567 503.0
BYD3_k127_1794472_4 COG0644 Dehydrogenases (flavoproteins) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 418.0
BYD3_k127_1794472_5 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 382.0
BYD3_k127_1794472_6 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004565 367.0
BYD3_k127_1794472_7 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006487 367.0
BYD3_k127_1794472_8 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 349.0
BYD3_k127_1794472_9 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K02003,K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004889 249.0
BYD3_k127_1804649_0 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 597.0
BYD3_k127_1804649_1 amino acid peptide transporter K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 472.0
BYD3_k127_1804649_10 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000319 191.0
BYD3_k127_1804649_11 PFAM von Willebrand factor type A K07114,K12511 - - 0.000000000000000000000002103 116.0
BYD3_k127_1804649_2 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 465.0
BYD3_k127_1804649_3 cAMP biosynthetic process K00870,K12132 - 2.7.1.37,2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 440.0
BYD3_k127_1804649_4 Aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 381.0
BYD3_k127_1804649_5 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001768 304.0
BYD3_k127_1804649_6 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000006375 269.0
BYD3_k127_1804649_7 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000000000000001338 217.0
BYD3_k127_1804649_8 RNA polymerase, sigma-24 subunit, ECF subfamily K02405 - - 0.0000000000000000000000000000000000000000000000000000000001703 208.0
BYD3_k127_1804649_9 ferroxidase activity K03594 GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 0.0000000000000000000000000000000000000000000000000000001383 200.0
BYD3_k127_1813260_0 Flavin-binding monooxygenase-like - - - 6.489e-237 741.0
BYD3_k127_1813260_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009515 368.0
BYD3_k127_1813260_10 - - - - 0.000000000000000000000000000004446 122.0
BYD3_k127_1813260_11 PFAM peptidase M48 Ste24p - - - 0.000000000000000000000000001256 128.0
BYD3_k127_1813260_12 Acyltransferase family - - - 0.000000000000000000002806 107.0
BYD3_k127_1813260_14 Transcriptional regulatory protein, C terminal - - - 0.0000000000000001088 94.0
BYD3_k127_1813260_15 - - - - 0.000000000000009822 86.0
BYD3_k127_1813260_16 Domain of unknown function (DUF1330) - - - 0.00000000000002745 76.0
BYD3_k127_1813260_18 COG3209 Rhs family protein - - - 0.000000000006749 78.0
BYD3_k127_1813260_19 Polyketide cyclase / dehydrase and lipid transport - - - 0.000005833 55.0
BYD3_k127_1813260_2 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 322.0
BYD3_k127_1813260_3 Chlorophyllase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009912 308.0
BYD3_k127_1813260_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009107 299.0
BYD3_k127_1813260_5 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.00000000000000000000000000000000000000000000000000000000000000000004883 250.0
BYD3_k127_1813260_7 Copper/zinc superoxide dismutase (SODC) K04565 - 1.15.1.1 0.000000000000000000000000000000000000000000002529 170.0
BYD3_k127_1813260_8 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000002654 148.0
BYD3_k127_1813260_9 META domain K03929 - - 0.00000000000000000000000000000004697 130.0
BYD3_k127_1843524_0 Zinc carboxypeptidase - - - 1.203e-214 692.0
BYD3_k127_1843524_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004632 572.0
BYD3_k127_1843524_10 Domain of unknown function (DUF1844) - - - 0.00000000003 73.0
BYD3_k127_1843524_11 membrane - - - 0.00002377 55.0
BYD3_k127_1843524_2 iron-nicotianamine transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 404.0
BYD3_k127_1843524_3 Unusual protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008263 355.0
BYD3_k127_1843524_4 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000671 265.0
BYD3_k127_1843524_5 TIGRFAM MazG family protein K02428,K04765 - 3.6.1.66,3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000302 258.0
BYD3_k127_1843524_6 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000002149 249.0
BYD3_k127_1843524_7 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000004995 196.0
BYD3_k127_1843524_8 CHRD domain - - - 0.000000000000000000000000000000000001895 145.0
BYD3_k127_1843524_9 Mov34 MPN PAD-1 family K21140 - 3.13.1.6 0.0000000000000000000001657 102.0
BYD3_k127_1856596_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004433 518.0
BYD3_k127_1856596_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 475.0
BYD3_k127_1856596_10 Peptidase family M50 K06402 - - 0.0000000000000000000000000000000000000003546 157.0
BYD3_k127_1856596_11 plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins K01802,K07533 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0006457,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.0000000000000000000001874 111.0
BYD3_k127_1856596_2 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 389.0
BYD3_k127_1856596_3 ArgK protein K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 305.0
BYD3_k127_1856596_4 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002951 279.0
BYD3_k127_1856596_5 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000006018 247.0
BYD3_k127_1856596_6 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000002256 190.0
BYD3_k127_1856596_7 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000001961 166.0
BYD3_k127_1856596_8 PFAM Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000003116 160.0
BYD3_k127_1856596_9 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.00000000000000000000000000000000000000002405 160.0
BYD3_k127_191950_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 589.0
BYD3_k127_191950_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 321.0
BYD3_k127_191950_2 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008246 285.0
BYD3_k127_191950_3 metalloendopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000004607 205.0
BYD3_k127_191950_4 PFAM PfkB domain protein - - - 0.000000000000000000000000000001591 122.0
BYD3_k127_191950_5 CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000000000000000173 114.0
BYD3_k127_191950_6 snoRNA binding - - - 0.0000000002651 66.0
BYD3_k127_191950_7 von Willebrand factor, type A K07114 - - 0.00004705 51.0
BYD3_k127_1949379_0 glycoside hydrolase family 38 K01191 - 3.2.1.24 0.0 1401.0
BYD3_k127_1949379_1 ABC transporter K10441 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 598.0
BYD3_k127_1949379_2 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005729 419.0
BYD3_k127_1949379_3 converts alpha-aldose to the beta-anomer K00849,K01785 GO:0003674,GO:0003824,GO:0004034,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0006006,GO:0006012,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019318,GO:0019320,GO:0019388,GO:0033499,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046365,GO:0071704,GO:1901575 2.7.1.6,5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 380.0
BYD3_k127_1949379_4 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000076 319.0
BYD3_k127_1949379_5 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 306.0
BYD3_k127_1949379_6 PRMT5 arginine-N-methyltransferase K11434 - 2.1.1.319 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 305.0
BYD3_k127_1949379_7 HPr kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005939 280.0
BYD3_k127_1949379_8 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.00000000000000000000896 94.0
BYD3_k127_1950323_0 B12 binding domain K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0032259,GO:0042084,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.0 1354.0
BYD3_k127_1950323_1 Tetratricopeptide repeat - - - 3.038e-199 637.0
BYD3_k127_1950323_2 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.0000000000000000000000000000000000000000000000000000000000001242 223.0
BYD3_k127_1950323_3 Heat shock protein DnaJ domain protein - - - 0.000000000000000000000000000000000000000000000006976 186.0
BYD3_k127_1950323_4 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000001114 174.0
BYD3_k127_1950323_5 methyltransferase - - - 0.0000000000000000009859 94.0
BYD3_k127_1952534_0 efflux transmembrane transporter activity K02004 - - 9.092e-203 658.0
BYD3_k127_1952534_1 ABC transporter transmembrane region K06160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 553.0
BYD3_k127_1952534_10 thioesterase involved in non-ribosomal peptide biosynthesis K01071 - 3.1.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 297.0
BYD3_k127_1952534_11 COG4542 Protein involved in propanediol utilization, and related proteins includes coumermycin biosynthetic protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006021 279.0
BYD3_k127_1952534_12 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001833 261.0
BYD3_k127_1952534_13 Calcineurin-like phosphoesterase superfamily domain K07498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006837 255.0
BYD3_k127_1952534_14 Cysteine-rich domain K18928 - - 0.00000000000000000000000000000000000000000000000000000000000000000002127 240.0
BYD3_k127_1952534_15 thiolester hydrolase activity K06889 - - 0.000000000000000000000000000000000000000000006399 181.0
BYD3_k127_1952534_16 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000309 169.0
BYD3_k127_1952534_17 MbtH-like protein K05375 - - 0.000000000000000000000000000000001266 130.0
BYD3_k127_1952534_18 Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source K00782 - - 0.000000000000000000002264 105.0
BYD3_k127_1952534_19 Participates in transcription elongation, termination and antitermination K02601,K05785 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000003866 79.0
BYD3_k127_1952534_2 PFAM Acyl-CoA dehydrogenase, C-terminal domain K06445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 458.0
BYD3_k127_1952534_20 - - - - 0.00000000125 64.0
BYD3_k127_1952534_3 cluster binding protein K18929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006136 425.0
BYD3_k127_1952534_4 cysteine synthase K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005169 413.0
BYD3_k127_1952534_5 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 370.0
BYD3_k127_1952534_6 Pfam ATP-grasp domain K01955 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 353.0
BYD3_k127_1952534_7 Thioesterase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 349.0
BYD3_k127_1952534_8 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005102 349.0
BYD3_k127_1952534_9 ornithine carbamoyltransferase K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006317 335.0
BYD3_k127_1956524_0 transport - - - 0.0 1101.0
BYD3_k127_1956524_1 transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 502.0
BYD3_k127_1956524_2 Associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 371.0
BYD3_k127_1956524_3 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001298 247.0
BYD3_k127_1956524_4 Domain of unknown function (DUF4350) - - - 0.00000000000000003646 94.0
BYD3_k127_1956524_5 Domain of unknown function (DUF4129) - - - 0.000000000001739 79.0
BYD3_k127_1956524_6 pathogenesis - - - 0.00000001168 66.0
BYD3_k127_1956524_7 peptide-aspartate beta-dioxygenase activity K00476 GO:0003008,GO:0003012,GO:0003674,GO:0003824,GO:0004597,GO:0005198,GO:0005488,GO:0005509,GO:0005513,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0005886,GO:0005938,GO:0006091,GO:0006355,GO:0006464,GO:0006508,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006936,GO:0006937,GO:0006942,GO:0007154,GO:0007165,GO:0007204,GO:0007275,GO:0007389,GO:0007584,GO:0008016,GO:0008150,GO:0008152,GO:0008285,GO:0008307,GO:0009055,GO:0009593,GO:0009605,GO:0009653,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010171,GO:0010243,GO:0010467,GO:0010468,GO:0010522,GO:0010524,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0010649,GO:0010880,GO:0010881,GO:0010882,GO:0010950,GO:0010952,GO:0010959,GO:0012505,GO:0014070,GO:0014074,GO:0014701,GO:0016020,GO:0016021,GO:0016485,GO:0016491,GO:0016528,GO:0016529,GO:0016705,GO:0016706,GO:0018126,GO:0018193,GO:0018197,GO:0019219,GO:0019222,GO:0019538,GO:0019722,GO:0019725,GO:0019932,GO:0022898,GO:0022900,GO:0023051,GO:0023052,GO:0023056,GO:0030001,GO:0030003,GO:0030162,GO:0030176,GO:0031090,GO:0031224,GO:0031227,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031585,GO:0031638,GO:0031647,GO:0031667,GO:0031974,GO:0031984,GO:0032237,GO:0032268,GO:0032270,GO:0032386,GO:0032388,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032541,GO:0032879,GO:0032880,GO:0032991,GO:0033017,GO:0033018,GO:0033157,GO:0033198,GO:0034220,GO:0034702,GO:0034703,GO:0034704,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035107,GO:0035108,GO:0035556,GO:0036211,GO:0042127,GO:0042175,GO:0042221,GO:0042264,GO:0042493,GO:0042592,GO:0043085,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043244,GO:0043269,GO:0043270,GO:0043412,GO:0044057,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045862,GO:0045893,GO:0045935,GO:0046683,GO:0046872,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048736,GO:0048856,GO:0048878,GO:0050789,GO:0050790,GO:0050794,GO:0050801,GO:0050848,GO:0050850,GO:0050896,GO:0051049,GO:0051050,GO:0051128,GO:0051171,GO:0051173,GO:0051179,GO:0051213,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051279,GO:0051281,GO:0051282,GO:0051336,GO:0051345,GO:0051480,GO:0051592,GO:0051604,GO:0051606,GO:0051716,GO:0051924,GO:0051928,GO:0052547,GO:0052548,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0055114,GO:0055117,GO:0060021,GO:0060173,GO:0060255,GO:0060314,GO:0060316,GO:0060322,GO:0060323,GO:0060324,GO:0060325,GO:0060341,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070588,GO:0070838,GO:0070887,GO:0071241,GO:0071248,GO:0071277,GO:0071704,GO:0071782,GO:0071944,GO:0072503,GO:0072507,GO:0072511,GO:0080090,GO:0090087,GO:0090257,GO:0090316,GO:0097202,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098827,GO:0099568,GO:0140096,GO:1901019,GO:1901021,GO:1901339,GO:1901341,GO:1901564,GO:1901698,GO:1901700,GO:1901879,GO:1902495,GO:1902531,GO:1902533,GO:1902680,GO:1903169,GO:1903506,GO:1903508,GO:1903522,GO:1903779,GO:1903827,GO:1903829,GO:1904062,GO:1904064,GO:1904427,GO:1904951,GO:1990351,GO:2000112,GO:2000116,GO:2001056,GO:2001141,GO:2001257,GO:2001259 1.14.11.16 0.0000001288 63.0
BYD3_k127_1956524_8 Stage II sporulation protein M - - - 0.0000005859 51.0
BYD3_k127_1957279_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 458.0
BYD3_k127_1957279_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 433.0
BYD3_k127_1957279_2 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 308.0
BYD3_k127_1957279_3 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000004034 145.0
BYD3_k127_1957279_4 radical SAM domain protein - - - 0.0000000000000001311 87.0
BYD3_k127_1957279_5 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000001174 59.0
BYD3_k127_1957279_6 Phosphate transporter family K03306 - - 0.00009347 49.0
BYD3_k127_1957380_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 516.0
BYD3_k127_1957380_1 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00850,K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 310.0
BYD3_k127_1957380_2 shikimate 3-dehydrogenase (NADP+) activity K00014,K13832 GO:0000166,GO:0003674,GO:0003824,GO:0003855,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25,4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 312.0
BYD3_k127_1957380_3 Involved in the tonB-independent uptake of proteins K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006149 312.0
BYD3_k127_1957380_4 Low molecular weight phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003128 281.0
BYD3_k127_1957380_5 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000000001092 222.0
BYD3_k127_1957380_6 beta-fructofuranosidase activity - - - 0.0000000000000000000000000000000000000000001666 162.0
BYD3_k127_1957380_7 - - - - 0.000000000000000000000004705 109.0
BYD3_k127_1962231_0 Peptidase M14, carboxypeptidase A - - - 0.0 1377.0
BYD3_k127_1962231_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.107e-276 861.0
BYD3_k127_1962231_10 TonB dependent receptor K16087 - - 0.000000000000000000000000000000000000000000000000000000000000000000009199 263.0
BYD3_k127_1962231_11 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000001324 235.0
BYD3_k127_1962231_12 Belongs to the glycosyl hydrolase 5 (cellulase A) family K19355 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0004567,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010412,GO:0015923,GO:0016052,GO:0016787,GO:0016798,GO:0016985,GO:0016998,GO:0043170,GO:0044036,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0046355,GO:0071554,GO:0071704,GO:1901575 3.2.1.78 0.0000000000000000000000000000000000000000000000000005017 205.0
BYD3_k127_1962231_13 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.000000000000000000000000000000000001906 156.0
BYD3_k127_1962231_14 sequence-specific DNA binding - - - 0.000000000000000000000000000000003797 138.0
BYD3_k127_1962231_15 SMI1-KNR4 cell-wall - - - 0.00000000000000000000000000000007054 130.0
BYD3_k127_1962231_16 - - - - 0.0000000000000000000000004811 125.0
BYD3_k127_1962231_17 Protein of unknown function (DUF1176) - - - 0.000001789 57.0
BYD3_k127_1962231_18 sequence-specific DNA binding - - - 0.000002251 55.0
BYD3_k127_1962231_2 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 7.223e-233 811.0
BYD3_k127_1962231_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007798 639.0
BYD3_k127_1962231_4 amino acid transport K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 527.0
BYD3_k127_1962231_5 Belongs to the ALAD family K01698 GO:0000287,GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007588 423.0
BYD3_k127_1962231_6 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004342 391.0
BYD3_k127_1962231_7 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K04105,K04110 - 6.2.1.25,6.2.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 384.0
BYD3_k127_1962231_8 domain protein K02674,K07004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 408.0
BYD3_k127_1962231_9 ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 358.0
BYD3_k127_1965554_0 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 431.0
BYD3_k127_1965554_1 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 332.0
BYD3_k127_1965554_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000001143 214.0
BYD3_k127_1965554_3 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000009984 184.0
BYD3_k127_1967010_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000001678 169.0
BYD3_k127_1967010_1 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000001238 162.0
BYD3_k127_1967010_2 Ferredoxin K04755 - - 0.00000001588 63.0
BYD3_k127_1967010_3 Thioredoxin-like - - - 0.0002301 52.0
BYD3_k127_1967010_4 amine dehydrogenase activity - - - 0.0006569 51.0
BYD3_k127_1967505_0 PFAM Phosphopantetheine attachment site - - - 0.0 1043.0
BYD3_k127_1967505_1 Amino acid adenylation enzyme thioester reductase family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009547 488.0
BYD3_k127_1967505_2 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000005297 158.0
BYD3_k127_1981519_0 Male sterility protein K01897 - 6.2.1.3 0.0 1312.0
BYD3_k127_1981519_1 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 3.952e-286 910.0
BYD3_k127_1981519_2 Domain of unknown function (DUF2088) - - - 5.049e-226 711.0
BYD3_k127_1981519_3 Tetratricopeptide repeat - - - 3.053e-203 649.0
BYD3_k127_1981519_4 SMART tyrosine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 367.0
BYD3_k127_1981519_5 epimerase dehydratase K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 304.0
BYD3_k127_1981519_6 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002133 250.0
BYD3_k127_1981519_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000001663 139.0
BYD3_k127_1981519_8 Peptidase family S41 - - - 0.000000003427 70.0
BYD3_k127_1986489_0 MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 562.0
BYD3_k127_1986489_1 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001299 265.0
BYD3_k127_1986489_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000597 219.0
BYD3_k127_2054224_0 cellulose binding - - - 6.551e-219 683.0
BYD3_k127_2054224_1 beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 432.0
BYD3_k127_2054224_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 341.0
BYD3_k127_2054224_3 regulation of response to stimulus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004665 281.0
BYD3_k127_2054224_4 Activator of Hsp90 ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001178 250.0
BYD3_k127_2054224_5 Cation transport regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000004493 232.0
BYD3_k127_2054224_6 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.0000000000000000000000000000000000000628 147.0
BYD3_k127_2054224_7 SnoaL-like domain - - - 0.0000000000000000000000000000000000001212 147.0
BYD3_k127_2054224_8 Belongs to the UPF0235 family K09131 - - 0.000000000000000000000004156 103.0
BYD3_k127_2058032_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.621e-240 763.0
BYD3_k127_2058032_1 ABC transporter K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 487.0
BYD3_k127_2058032_10 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000006314 217.0
BYD3_k127_2058032_11 - - - - 0.00000000000000000000000000000000000000000000000423 190.0
BYD3_k127_2058032_12 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000000004949 169.0
BYD3_k127_2058032_13 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.000000000000000000000003927 108.0
BYD3_k127_2058032_14 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000007512 111.0
BYD3_k127_2058032_15 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000005474 92.0
BYD3_k127_2058032_16 Tetratricopeptide repeat - - - 0.000000000000003454 85.0
BYD3_k127_2058032_17 TIGRFAM TonB K03832 - - 0.00000000000001253 83.0
BYD3_k127_2058032_18 Biopolymer transport protein K03559,K03560 - - 0.0000000000856 69.0
BYD3_k127_2058032_19 - - - - 0.0000004808 62.0
BYD3_k127_2058032_2 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 346.0
BYD3_k127_2058032_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004682 280.0
BYD3_k127_2058032_4 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009707 271.0
BYD3_k127_2058032_5 MotA TolQ ExbB proton channel K03561,K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004123 269.0
BYD3_k127_2058032_6 thioesterase involved in non-ribosomal peptide biosynthesis K01071 - 3.1.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000009168 265.0
BYD3_k127_2058032_7 ATPase activity K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005567 251.0
BYD3_k127_2058032_8 neuron death in response to oxidative stress K01173,K07004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002426 241.0
BYD3_k127_2058032_9 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004653 250.0
BYD3_k127_2096822_0 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006795 609.0
BYD3_k127_2096822_1 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 482.0
BYD3_k127_2096822_10 PFAM TM2 domain - - - 0.00000000000000000000000000001246 121.0
BYD3_k127_2096822_11 Protein of unknown function (DUF2752) - - - 0.0000000000000000000002115 103.0
BYD3_k127_2096822_12 O-Antigen ligase K18814 - - 0.000000000000000000001467 109.0
BYD3_k127_2096822_13 Interferon-induced transmembrane protein - - - 0.0000000000000000001416 92.0
BYD3_k127_2096822_14 - - - - 0.000003613 56.0
BYD3_k127_2096822_2 major pilin protein fima - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 430.0
BYD3_k127_2096822_3 RmlD substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 417.0
BYD3_k127_2096822_4 PFAM Glycosyl transferase family 2 K10012 - 2.4.2.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006626 370.0
BYD3_k127_2096822_5 Fe-S oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 330.0
BYD3_k127_2096822_6 Highly conserved protein containing a thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 306.0
BYD3_k127_2096822_7 PFAM sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 305.0
BYD3_k127_2096822_8 Protein of unknown function (DUF354) K09726 - - 0.000000000000000000000000000000000000000000000000000000000000000003236 239.0
BYD3_k127_2096822_9 PFAM Peptidase M20 - - - 0.00000000000000000000000000000000000000000000000000000000000001193 231.0
BYD3_k127_211362_0 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269 510.0
BYD3_k127_211362_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 479.0
BYD3_k127_211362_2 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 469.0
BYD3_k127_211362_3 ABC-type molybdate transport system, permease component K02018 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000002604 230.0
BYD3_k127_211362_4 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000001253 81.0
BYD3_k127_2167558_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 517.0
BYD3_k127_2167558_1 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004594 393.0
BYD3_k127_2167558_2 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000898 271.0
BYD3_k127_2167558_3 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003041 237.0
BYD3_k127_2167558_4 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000003173 176.0
BYD3_k127_2167558_5 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000001636 111.0
BYD3_k127_2167558_6 Cell wall-associated hydrolase (invasion-associated protein) - - - 0.00000000000002649 81.0
BYD3_k127_2167558_7 - - - - 0.0003338 46.0
BYD3_k127_2274613_0 NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036 533.0
BYD3_k127_2274613_1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit K00333 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009341 508.0
BYD3_k127_2274613_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000004671 160.0
BYD3_k127_2274613_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000004457 156.0
BYD3_k127_2274613_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000000687 128.0
BYD3_k127_2274613_13 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000001121 119.0
BYD3_k127_2274613_14 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K00340 - 1.6.5.3 0.00000000000000000000000000003928 121.0
BYD3_k127_2274613_15 Belongs to the phosphoglycerate mutase family K15634 - 5.4.2.12 0.0000000000000000000000000005889 121.0
BYD3_k127_2274613_16 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000006241 112.0
BYD3_k127_2274613_17 - - - - 0.000000000000241 82.0
BYD3_k127_2274613_18 BON domain - - - 0.000000000006571 74.0
BYD3_k127_2274613_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 478.0
BYD3_k127_2274613_3 Belongs to the N(4) N(6)-methyltransferase family K00571 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 438.0
BYD3_k127_2274613_4 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008534 402.0
BYD3_k127_2274613_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 333.0
BYD3_k127_2274613_6 Protein of unknown function (DUF1385) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003383 267.0
BYD3_k127_2274613_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000004144 231.0
BYD3_k127_2274613_8 DNA-templated transcription, initiation - - - 0.00000000000000000000000000000000000000000000000000000002765 212.0
BYD3_k127_2274613_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000003165 173.0
BYD3_k127_2279072_0 Glycosyltransferase 36 associated - - - 0.0 2693.0
BYD3_k127_2279072_1 PFAM Prolyl oligopeptidase family - - - 2.867e-277 867.0
BYD3_k127_2279072_10 - - - - 0.0000000000000000000000000000000000000000000000000000000003297 212.0
BYD3_k127_2279072_11 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000001718 210.0
BYD3_k127_2279072_12 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000007006 178.0
BYD3_k127_2279072_14 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000000000000006526 163.0
BYD3_k127_2279072_15 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000003131 147.0
BYD3_k127_2279072_17 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.0000004251 61.0
BYD3_k127_2279072_2 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009466 554.0
BYD3_k127_2279072_3 FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 481.0
BYD3_k127_2279072_4 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 426.0
BYD3_k127_2279072_5 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004163 428.0
BYD3_k127_2279072_6 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 313.0
BYD3_k127_2279072_7 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 300.0
BYD3_k127_2279072_8 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000514 258.0
BYD3_k127_2279072_9 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000002717 238.0
BYD3_k127_22834_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1328.0
BYD3_k127_22834_1 Carboxypeptidase regulatory-like domain - - - 1.344e-246 798.0
BYD3_k127_22834_10 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000114 258.0
BYD3_k127_22834_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K03585 - - 0.000000000000000000000000000000000000000000000000000000000000126 228.0
BYD3_k127_22834_12 iron-sulfur cluster assembly - - - 0.00000000000000000000000000000000000000000000000000000002442 201.0
BYD3_k127_22834_13 GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000000000000000002103 188.0
BYD3_k127_22834_14 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000988 171.0
BYD3_k127_22834_15 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000001068 170.0
BYD3_k127_22834_16 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.00000000000000000000000000000000000000236 150.0
BYD3_k127_22834_17 Endonuclease Exonuclease Phosphatase - - - 0.00000001526 65.0
BYD3_k127_22834_18 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000005218 58.0
BYD3_k127_22834_19 Transglutaminase-like superfamily - - - 0.0000828 54.0
BYD3_k127_22834_2 Peptidase family M28 - - - 7.605e-212 672.0
BYD3_k127_22834_20 Belongs to the UPF0337 (CsbD) family - - - 0.0000872 50.0
BYD3_k127_22834_3 Elongation factor SelB, winged helix K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966 537.0
BYD3_k127_22834_4 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 421.0
BYD3_k127_22834_5 glycosyl transferase group 1 K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 403.0
BYD3_k127_22834_6 AcrB/AcrD/AcrF family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008303 329.0
BYD3_k127_22834_7 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000005139 282.0
BYD3_k127_22834_8 Sigma-70 region 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000483 288.0
BYD3_k127_22834_9 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001785 273.0
BYD3_k127_2286362_0 von Willebrand factor, type A K07114 - - 1.191e-211 677.0
BYD3_k127_2286362_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 413.0
BYD3_k127_2286362_2 Belongs to the heat shock protein 70 family K04046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 403.0
BYD3_k127_2286362_3 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 332.0
BYD3_k127_2286362_6 - - - - 0.000000000000000000000000186 115.0
BYD3_k127_2291760_0 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 392.0
BYD3_k127_2291760_1 ABC-type multidrug transport system ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 358.0
BYD3_k127_2291760_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 355.0
BYD3_k127_2291760_3 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006947 344.0
BYD3_k127_2291760_4 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 322.0
BYD3_k127_2291760_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 288.0
BYD3_k127_2291760_6 GAF domain K08968 - 1.8.4.14 0.00000000000000000000000000000000000000000000000000000001143 203.0
BYD3_k127_2303511_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 3.117e-215 685.0
BYD3_k127_2303511_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 502.0
BYD3_k127_2303511_2 Sodium:dicarboxylate symporter family K03309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 317.0
BYD3_k127_2303511_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002064 282.0
BYD3_k127_2303511_4 FtsJ-like methyltransferase K06442 GO:0000154,GO:0001510,GO:0001897,GO:0001906,GO:0001907,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0019835,GO:0019836,GO:0022613,GO:0031167,GO:0031640,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035821,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044003,GO:0044004,GO:0044085,GO:0044179,GO:0044237,GO:0044238,GO:0044260,GO:0044364,GO:0044403,GO:0044419,GO:0044764,GO:0046483,GO:0051701,GO:0051704,GO:0051715,GO:0051801,GO:0051817,GO:0051818,GO:0051883,GO:0052331,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003529 278.0
BYD3_k127_2303511_5 Domain of unknown function (DUF4440) - - - 0.000001669 58.0
BYD3_k127_2311271_0 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 321.0
BYD3_k127_2311271_1 epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 302.0
BYD3_k127_2311271_10 PFAM Fimbrial assembly family protein K02663 - - 0.0001863 52.0
BYD3_k127_2311271_11 PFAM helix-turn-helix domain protein K07729 - - 0.0006584 46.0
BYD3_k127_2311271_2 Secretin and TonB N terminus short domain K02666 - - 0.00000000000000000000000000000000000000000000000000000000000001256 239.0
BYD3_k127_2311271_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000006456 201.0
BYD3_k127_2311271_4 Type IV pilus assembly protein PilM; K02662 - - 0.0000000000000000000000000000000000000000000003237 172.0
BYD3_k127_2311271_5 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000000000000000000000000000001464 144.0
BYD3_k127_2311271_6 nuclease - - - 0.0000000000000000000004111 110.0
BYD3_k127_2311271_7 Roadblock/LC7 domain - - - 0.00000000000006359 76.0
BYD3_k127_2311271_8 PFAM Pilus assembly protein PilO K02664 - - 0.000001035 58.0
BYD3_k127_2311271_9 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.000001656 61.0
BYD3_k127_2339978_0 Peptidase S46 - - - 2.835e-231 735.0
BYD3_k127_2339978_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 1.241e-215 693.0
BYD3_k127_2339978_2 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002506 388.0
BYD3_k127_2339978_3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009925 270.0
BYD3_k127_2341089_0 PFAM Type II secretion system protein E K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 619.0
BYD3_k127_2341089_1 type II secretion system K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008421 272.0
BYD3_k127_2341089_2 PFAM von Willebrand factor type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000001253 237.0
BYD3_k127_2341089_3 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000005203 185.0
BYD3_k127_2342608_0 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.000000000000000000000000000000000000000000000000000000000000000000000000007967 259.0
BYD3_k127_2342608_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000006915 251.0
BYD3_k127_2342608_2 Unusual protein kinase - - - 0.00000000000000000000000000000000000000000000000003534 190.0
BYD3_k127_2361946_0 NeuB family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 462.0
BYD3_k127_2361946_1 COGs COG4299 conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009748 392.0
BYD3_k127_2361946_2 Protein of unknown function (DUF4199) - - - 0.000000000000000000000000000000000000000000000000000000000000000002568 231.0
BYD3_k127_2361946_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000003362 188.0
BYD3_k127_2361946_4 chorismate mutase K04518,K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000004647 148.0
BYD3_k127_2361946_5 Thiol-disulfide oxidoreductase - - - 0.00000000000000000000000000000000007861 137.0
BYD3_k127_2361946_6 Chorismate mutase K00661,K01713,K04092,K04093,K04516,K04518,K14170,K14187 GO:0003674,GO:0003824,GO:0004106,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 1.3.1.12,2.3.1.79,4.2.1.51,4.2.1.91,5.4.99.5 0.0000000000002844 74.0
BYD3_k127_2361946_7 polysaccharide deacetylase K01179 - 3.2.1.4 0.0000000214 60.0
BYD3_k127_2368396_0 Transporter-associated region K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005667 520.0
BYD3_k127_2368396_1 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 - 4.4.1.1,4.4.1.2,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 497.0
BYD3_k127_2368396_10 PFAM Binding-protein-dependent transport K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 302.0
BYD3_k127_2368396_11 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018065,GO:0018130,GO:0018160,GO:0018193,GO:0018198,GO:0019438,GO:0019538,GO:0033013,GO:0033014,GO:0034641,GO:0036211,GO:0042168,GO:0042440,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 300.0
BYD3_k127_2368396_12 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000004113 245.0
BYD3_k127_2368396_13 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000001326 234.0
BYD3_k127_2368396_14 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000008957 211.0
BYD3_k127_2368396_15 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000001036 200.0
BYD3_k127_2368396_16 Domain of unknown function (DUF4162) K01990 - - 0.00000000000000000000000000000000000000000000000000001279 204.0
BYD3_k127_2368396_17 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000002831 176.0
BYD3_k127_2368396_18 Transport permease protein K01992 - - 0.0000000000000000000000000000000000004845 151.0
BYD3_k127_2368396_19 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000005357 126.0
BYD3_k127_2368396_2 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007688 477.0
BYD3_k127_2368396_20 - - - - 0.00000000000000000000000001492 114.0
BYD3_k127_2368396_21 Peptidase M16 inactive domain K07263,K07623 - - 0.0000000000000000651 94.0
BYD3_k127_2368396_22 von Willebrand factor, type A K07114 - - 0.0000000000000002595 92.0
BYD3_k127_2368396_23 NfeD-like C-terminal, partner-binding - - - 0.0000000000000003512 84.0
BYD3_k127_2368396_24 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000006862 75.0
BYD3_k127_2368396_25 Aminotransferase K00812 - 2.6.1.1 0.0000000004199 61.0
BYD3_k127_2368396_3 membrane protein, TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 409.0
BYD3_k127_2368396_4 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 379.0
BYD3_k127_2368396_5 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 379.0
BYD3_k127_2368396_6 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 364.0
BYD3_k127_2368396_7 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 340.0
BYD3_k127_2368396_8 Ankyrin repeats (many copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 336.0
BYD3_k127_2368396_9 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005703 323.0
BYD3_k127_2378932_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004149 458.0
BYD3_k127_2378932_1 RmlD substrate binding domain K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 434.0
BYD3_k127_2378932_10 - - - - 0.000000463 61.0
BYD3_k127_2378932_2 Wzt C-terminal domain K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 389.0
BYD3_k127_2378932_3 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 343.0
BYD3_k127_2378932_4 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 327.0
BYD3_k127_2378932_5 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003345 276.0
BYD3_k127_2378932_6 Methionine biosynthesis protein MetW K18827 - 2.1.1.294,2.7.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000005315 270.0
BYD3_k127_2378932_7 ABC-2 type transporter - - - 0.00000000000000000000000000000000000000000000000000000000006991 213.0
BYD3_k127_2378932_8 bacterial-type flagellum-dependent cell motility K03641 - - 0.000000000000006195 89.0
BYD3_k127_2378932_9 protein import - - - 0.0000003824 63.0
BYD3_k127_2480738_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 578.0
BYD3_k127_2480738_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009671 470.0
BYD3_k127_2480738_10 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000008916 126.0
BYD3_k127_2480738_11 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000006594 114.0
BYD3_k127_2480738_12 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000001416 91.0
BYD3_k127_2480738_13 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000001487 59.0
BYD3_k127_2480738_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005449 421.0
BYD3_k127_2480738_3 PFAM Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008245 289.0
BYD3_k127_2480738_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001666 244.0
BYD3_k127_2480738_5 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000000003042 184.0
BYD3_k127_2480738_6 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000568 172.0
BYD3_k127_2480738_7 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000004743 156.0
BYD3_k127_2480738_8 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000002534 150.0
BYD3_k127_2480738_9 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000002857 133.0
BYD3_k127_255022_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 467.0
BYD3_k127_255022_1 Belongs to the phosphoglycerate kinase family K00927,K01803 - 2.7.2.3,5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 440.0
BYD3_k127_255022_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003065 282.0
BYD3_k127_2601763_0 PrkA AAA domain protein K07180 - - 2.96e-307 953.0
BYD3_k127_2601763_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 467.0
BYD3_k127_2601763_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177,K03483 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000003058 237.0
BYD3_k127_2601763_3 Modulates RecA activity K03565 - - 0.00000001076 66.0
BYD3_k127_2602921_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1217.0
BYD3_k127_2602921_1 Carbon starvation protein K06200 - - 3.104e-218 693.0
BYD3_k127_2602921_10 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000001635 140.0
BYD3_k127_2602921_11 Iron-sulphur cluster biosynthesis - - - 0.000000000000000000000000000000000002957 140.0
BYD3_k127_2602921_12 deaminated base DNA N-glycosylase activity K21929 - 3.2.2.27 0.00000000000000000000000000000000001353 142.0
BYD3_k127_2602921_13 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000006035 144.0
BYD3_k127_2602921_14 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.00000009129 55.0
BYD3_k127_2602921_15 membrane - - - 0.0000007547 59.0
BYD3_k127_2602921_2 PFAM Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006091 505.0
BYD3_k127_2602921_3 protein tyrosine kinase activity K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 366.0
BYD3_k127_2602921_4 electron transfer activity K00428 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000253 274.0
BYD3_k127_2602921_5 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000002602 243.0
BYD3_k127_2602921_6 FR47-like protein - - - 0.000000000000000000000000000000000000000000000398 171.0
BYD3_k127_2602921_7 PFAM BioY protein K03523 - - 0.000000000000000000000000000000000000000001164 167.0
BYD3_k127_2602921_8 Glycine cleavage T-protein C-terminal barrel domain K00605,K06980 - 2.1.2.10 0.000000000000000000000000000000000000000002163 168.0
BYD3_k127_2602921_9 PFAM Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000007778 143.0
BYD3_k127_2606148_0 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005191 428.0
BYD3_k127_2606148_1 Bacterial extracellular solute-binding protein K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 394.0
BYD3_k127_2606148_2 transmembrane transport K02025,K15771 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002939 282.0
BYD3_k127_2606148_3 glycerophosphodiester transmembrane transport K02026 - - 0.00000000000000000000000000000000000000000000005835 173.0
BYD3_k127_2637199_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008727 497.0
BYD3_k127_2637199_1 Domain of unknown function (DUF1972) K12996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009311 407.0
BYD3_k127_2637199_10 KH domain K06960 - - 0.0000000000000008445 79.0
BYD3_k127_2637199_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 366.0
BYD3_k127_2637199_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002987 291.0
BYD3_k127_2637199_4 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003552 270.0
BYD3_k127_2637199_5 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001292 273.0
BYD3_k127_2637199_6 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000001659 156.0
BYD3_k127_2637199_7 - - - - 0.000000000000000000000000000002726 128.0
BYD3_k127_2637199_8 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000001463 113.0
BYD3_k127_2637199_9 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000004948 98.0
BYD3_k127_2653235_0 Belongs to the ATP-dependent AMP-binding enzyme family - - - 0.0 1553.0
BYD3_k127_2653235_1 Non-ribosomal peptide - - - 0.0 1054.0
BYD3_k127_2653235_10 Phosphopantetheine attachment site - - - 0.00000000000000000000002009 104.0
BYD3_k127_2653235_2 Pfam:HxxPF_rpt - - - 4.363e-264 854.0
BYD3_k127_2653235_3 AMP-binding enzyme C-terminal domain - - - 5.613e-197 635.0
BYD3_k127_2653235_4 phosphopantetheine binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 466.0
BYD3_k127_2653235_5 Pyridoxal-phosphate dependent enzyme K21949 - 2.5.1.140 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 425.0
BYD3_k127_2653235_6 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 404.0
BYD3_k127_2653235_7 Ornithine cyclodeaminase/mu-crystallin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008181 349.0
BYD3_k127_2653235_8 COGs COG3321 Polyketide synthase modules and related protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 341.0
BYD3_k127_2653235_9 PFAM Phytanoyl-CoA dioxygenase (PhyH) K10674 - 1.14.11.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 312.0
BYD3_k127_2661071_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1092.0
BYD3_k127_2661071_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 401.0
BYD3_k127_2661071_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.5 0.000000000000000000000000000000000001057 148.0
BYD3_k127_2661071_3 LysM domain K01185,K02030,K04043 - 3.2.1.17 0.0000000000004646 80.0
BYD3_k127_2664378_0 Dipeptidyl peptidase IV (DPP IV) K01278 - 3.4.14.5 2.572e-294 922.0
BYD3_k127_2664378_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 495.0
BYD3_k127_2664378_2 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 386.0
BYD3_k127_2664378_3 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008943 334.0
BYD3_k127_2664378_4 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 321.0
BYD3_k127_2664378_5 6-phosphogluconolactonase K01057 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009987,GO:0016787,GO:0016788,GO:0017057,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0052689,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000004352 253.0
BYD3_k127_2677678_0 Non-ribosomal peptide synthetase modules and related proteins - - - 0.0 1597.0
BYD3_k127_2682785_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K15654 - - 0.0 1279.0
BYD3_k127_2682785_1 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003986 465.0
BYD3_k127_2687042_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 430.0
BYD3_k127_2687042_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 380.0
BYD3_k127_2687042_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000709 217.0
BYD3_k127_2687042_3 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.000000000000000000000000000000000000000000000000000000445 196.0
BYD3_k127_2687042_4 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000007045 113.0
BYD3_k127_2687042_5 Jag_N K06346 - - 0.000000000000000000000006605 106.0
BYD3_k127_2687042_6 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000003999 70.0
BYD3_k127_2687042_7 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000006494 56.0
BYD3_k127_2698409_0 GTP-binding protein TypA K06207 - - 1.64e-257 806.0
BYD3_k127_2698409_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465 417.0
BYD3_k127_2698409_10 general secretion pathway protein - - - 0.0000007894 59.0
BYD3_k127_2698409_11 Involved in the tonB-independent uptake of proteins - - - 0.0000131 56.0
BYD3_k127_2698409_12 PFAM Fimbrial assembly family protein K02663 - - 0.0002055 51.0
BYD3_k127_2698409_2 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007921 320.0
BYD3_k127_2698409_3 Cation efflux family K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001117 264.0
BYD3_k127_2698409_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000007606 233.0
BYD3_k127_2698409_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000006856 196.0
BYD3_k127_2698409_6 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000008109 182.0
BYD3_k127_2698409_7 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.00000000000000000000000000000000000000000000005625 179.0
BYD3_k127_2698409_8 zinc-ribbon domain - - - 0.0000000000000005478 87.0
BYD3_k127_2698409_9 TPR repeat - - - 0.00000000000397 77.0
BYD3_k127_2701806_0 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 428.0
BYD3_k127_2701806_1 Zn-dependent hydrolase, glyoxylase - - - 0.00000000000000000000000000003991 123.0
BYD3_k127_2701806_2 PDZ DHR GLGF domain protein - - - 0.000000000000000000000000000517 128.0
BYD3_k127_2701806_3 C4-type zinc ribbon domain K07164,K22391 - 3.5.4.16 0.0000000000000000000002279 106.0
BYD3_k127_2705380_0 beta-lactamase - - - 6.303e-255 810.0
BYD3_k127_2705380_1 transport - - - 5.727e-221 713.0
BYD3_k127_2705380_2 COG0147 Anthranilate para-aminobenzoate synthases component I K01665,K03342,K13950 - 2.6.1.85,4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 499.0
BYD3_k127_2705380_3 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 450.0
BYD3_k127_2705380_4 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 396.0
BYD3_k127_2705380_5 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003077 279.0
BYD3_k127_2705380_6 BadF/BadG/BcrA/BcrD ATPase family - - - 0.000000000000000000000000000000000000001107 160.0
BYD3_k127_2730572_0 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007729 495.0
BYD3_k127_2730572_1 pfam abc K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006589 315.0
BYD3_k127_2730572_10 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000001965 150.0
BYD3_k127_2730572_11 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000000000000000001174 142.0
BYD3_k127_2730572_12 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000002563 125.0
BYD3_k127_2730572_13 diguanylate cyclase - - - 0.000000000000000000000003107 116.0
BYD3_k127_2730572_14 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.000000000000002198 79.0
BYD3_k127_2730572_15 - - - - 0.00000003828 60.0
BYD3_k127_2730572_16 O-Antigen ligase K18814 - - 0.00000006974 65.0
BYD3_k127_2730572_2 Deoxyhypusine synthase K00809 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008612,GO:0009058,GO:0009987,GO:0010467,GO:0016740,GO:0016765,GO:0018193,GO:0018205,GO:0019538,GO:0034038,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002744 286.0
BYD3_k127_2730572_3 PFAM Phosphomethylpyrimidine kinase type-1 K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000149 209.0
BYD3_k127_2730572_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000007846 223.0
BYD3_k127_2730572_5 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000002214 202.0
BYD3_k127_2730572_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000007781 179.0
BYD3_k127_2730572_7 BON domain - - - 0.0000000000000000000000000000000000000000001281 165.0
BYD3_k127_2730572_8 HAD-superfamily hydrolase, subfamily IIB - - - 0.000000000000000000000000000000000000000001627 168.0
BYD3_k127_2730572_9 CHRD domain - - - 0.00000000000000000000000000000000000001356 151.0
BYD3_k127_2735070_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004126 430.0
BYD3_k127_2735070_1 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 416.0
BYD3_k127_2735070_2 SCO1/SenC K07152,K08976 - - 0.000000000000000000000000000000000000000000000000000000000001379 217.0
BYD3_k127_2735070_3 SCO1/SenC K07152,K08976 - - 0.0000000000000000000000000000000000000000000000000000000002343 212.0
BYD3_k127_2735070_4 response regulator - - - 0.000000000000000004983 94.0
BYD3_k127_2735070_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.000007471 57.0
BYD3_k127_2778025_0 Subtilase family - - - 5.429e-210 670.0
BYD3_k127_2778025_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 346.0
BYD3_k127_2778025_2 competence protein COMEC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006367 320.0
BYD3_k127_2778025_3 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000004292 216.0
BYD3_k127_2786109_0 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 390.0
BYD3_k127_2786109_1 3-demethylubiquinone-9 3-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001342 239.0
BYD3_k127_2786109_2 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000732 151.0
BYD3_k127_2786109_3 NIPSNAP - - - 0.000000000000000000000001108 106.0
BYD3_k127_2786109_4 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000000000000005189 91.0
BYD3_k127_2859159_0 Domain in cystathionine beta-synthase and other proteins. - - - 4.773e-229 730.0
BYD3_k127_2859159_1 Zinc-binding dehydrogenase K00008,K00148,K18369 - 1.1.1.14,1.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007085 573.0
BYD3_k127_2859159_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000006531 156.0
BYD3_k127_2859159_3 Universal stress protein family - - - 0.000000000000000000000000000000009863 139.0
BYD3_k127_2859159_4 AMP binding K06149 - - 0.000000000000000000000000000004355 124.0
BYD3_k127_2859159_5 AMP binding - - - 0.000000000000003153 87.0
BYD3_k127_2859159_6 TIGRFAM sporulation protein, yteA - - - 0.0000002489 60.0
BYD3_k127_2928114_0 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 464.0
BYD3_k127_2928114_1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 306.0
BYD3_k127_2928114_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 296.0
BYD3_k127_2928114_3 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000001227 246.0
BYD3_k127_2928114_4 Organic solvent tolerance protein K04744 - - 0.000000000000000002659 96.0
BYD3_k127_2934105_0 Prolyl oligopeptidase family - - - 1.647e-256 810.0
BYD3_k127_2934105_1 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 569.0
BYD3_k127_2934105_2 PAS fold K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 443.0
BYD3_k127_2934105_3 Soluble lytic murein transglycosylase-like protein - - - 0.00000000000000000000000000000000133 141.0
BYD3_k127_2934105_4 Ankyrin repeat - - - 0.00000000000000000000000000000007025 135.0
BYD3_k127_2934105_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000001601 106.0
BYD3_k127_2934105_6 Cupin 2, conserved barrel domain protein - - - 0.000000000000000268 85.0
BYD3_k127_2964757_0 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009642 414.0
BYD3_k127_2964757_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 326.0
BYD3_k127_2981895_0 COG0226 ABC-type phosphate transport system periplasmic K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 440.0
BYD3_k127_2981895_1 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 418.0
BYD3_k127_2981895_2 Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 411.0
BYD3_k127_2981895_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 401.0
BYD3_k127_2981895_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 356.0
BYD3_k127_2981895_5 ABC transporter K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 347.0
BYD3_k127_2981895_6 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000001053 243.0
BYD3_k127_2981895_7 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.0000000000000000000000000000000000000000000000000000002165 202.0
BYD3_k127_2981895_8 PhoU domain K02039 - - 0.00000000000000000000000000000000000000000000000004815 186.0
BYD3_k127_2981895_9 DnaJ molecular chaperone homology domain - - - 0.000000000000003243 84.0
BYD3_k127_2988015_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.183e-200 648.0
BYD3_k127_2988015_10 Monogalactosyldiacylglycerol (MGDG) synthase K03715 - 2.4.1.46 0.000000000000000000000000000000002498 144.0
BYD3_k127_2988015_11 2OG-Fe(II) oxygenase superfamily K07336,K07394 - - 0.00000000000000000000000000000001294 136.0
BYD3_k127_2988015_12 - - - - 0.00000000000003551 85.0
BYD3_k127_2988015_13 Radical SAM K22227 - - 0.00000000005378 67.0
BYD3_k127_2988015_2 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 560.0
BYD3_k127_2988015_3 PFAM Adenosine AMP deaminase K01488 - 3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 480.0
BYD3_k127_2988015_4 Carbamoyltransferase C-terminus K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 474.0
BYD3_k127_2988015_5 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 413.0
BYD3_k127_2988015_6 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 372.0
BYD3_k127_2988015_7 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003798 331.0
BYD3_k127_2988015_8 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000004043 229.0
BYD3_k127_2988015_9 Enoyl-(Acyl carrier protein) reductase K00034,K03366 - 1.1.1.304,1.1.1.47,1.1.1.76 0.000000000000000000000000000000000000000000000000000001168 200.0
BYD3_k127_2997797_0 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 2.041e-195 619.0
BYD3_k127_2997797_1 Belongs to the BshC family K22136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004635 285.0
BYD3_k127_2997797_2 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003543 274.0
BYD3_k127_2997797_3 Belongs to the DapA family K18123 - 4.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000001048 246.0
BYD3_k127_2997797_4 isomerase activity K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000003119 229.0
BYD3_k127_2997797_5 ferredoxin-NADP+ reductase activity K00384,K21567 - 1.18.1.2,1.19.1.1,1.8.1.9 0.000000000000000000000000000000000000000000000000000000284 205.0
BYD3_k127_2997797_6 Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000001752 179.0
BYD3_k127_2997797_7 - - - - 0.000009116 58.0
BYD3_k127_3027260_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 4.065e-299 932.0
BYD3_k127_3027260_1 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 2.947e-208 661.0
BYD3_k127_3027260_2 Acyl-CoA dehydrogenase, C-terminal domain K00248,K09478 - 1.3.8.1,1.3.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004548 551.0
BYD3_k127_3027260_3 Ornithine decarboxylase inhibitor-putative sigma54 transciptional regulator K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004595 357.0
BYD3_k127_3027260_4 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000007979 178.0
BYD3_k127_3027260_5 lysyltransferase activity K07027 - - 0.0000000003406 71.0
BYD3_k127_3027260_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00001548 57.0
BYD3_k127_3055953_0 PFAM type II secretion system protein E K02283,K03609 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 574.0
BYD3_k127_3055953_1 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 342.0
BYD3_k127_3055953_10 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000001345 83.0
BYD3_k127_3055953_11 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000002485 72.0
BYD3_k127_3055953_12 TadE-like protein - - - 0.00000000086 66.0
BYD3_k127_3055953_14 TadE-like protein - - - 0.0009664 49.0
BYD3_k127_3055953_2 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001175 280.0
BYD3_k127_3055953_3 Type II secretion system K12510 - - 0.000000000000000000000000000000000000000000000000000000000001709 223.0
BYD3_k127_3055953_4 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000001098 199.0
BYD3_k127_3055953_5 Type II secretion system (T2SS), protein F K12511 - - 0.00000000000000000000000000000000000000000000000001304 195.0
BYD3_k127_3055953_6 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.000000000000000000000000000000000000000000000000584 186.0
BYD3_k127_3055953_7 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000003781 147.0
BYD3_k127_3055953_8 TIGRFAM VWFA-related Acidobacterial domain - - - 0.000000000000000000000000001355 126.0
BYD3_k127_3055953_9 Peptidase A24A, prepilin type IV K02278 - 3.4.23.43 0.00000000000000008378 87.0
BYD3_k127_3061893_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004705 551.0
BYD3_k127_3061893_1 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 458.0
BYD3_k127_3061893_10 von Willebrand factor, type A K07114 - - 0.00000000003639 74.0
BYD3_k127_3061893_11 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000001251 72.0
BYD3_k127_3061893_2 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 397.0
BYD3_k127_3061893_3 Peptidase M16 inactive domain K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004791 314.0
BYD3_k127_3061893_4 pfkB family carbohydrate kinase K18478 - 2.7.1.184 0.0000000000000000000000000000000000000000000000000000000000000000001324 241.0
BYD3_k127_3061893_5 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000001563 230.0
BYD3_k127_3061893_6 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000005027 216.0
BYD3_k127_3061893_7 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000000000000009945 207.0
BYD3_k127_3061893_8 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000001126 180.0
BYD3_k127_3061893_9 peptidase M15B and M15C DD-carboxypeptidase VanY - - - 0.0000000000000000000001621 109.0
BYD3_k127_3080663_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.614e-285 887.0
BYD3_k127_3080663_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 376.0
BYD3_k127_3080663_2 4Fe-4S single cluster domain of Ferredoxin I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 347.0
BYD3_k127_3080663_3 Uncharacterised nucleotidyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000007765 239.0
BYD3_k127_3080663_4 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion - - - 0.0000000001991 72.0
BYD3_k127_3093890_0 Amidohydrolase family K01464 - 3.5.2.2 4.156e-202 640.0
BYD3_k127_3093890_1 permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 583.0
BYD3_k127_3093890_2 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 505.0
BYD3_k127_3093890_3 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 460.0
BYD3_k127_3093890_4 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007261 448.0
BYD3_k127_3093890_5 4Fe-4S dicluster domain K17723 - 1.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 440.0
BYD3_k127_3093890_6 Exodeoxyribonuclease iii K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006647 308.0
BYD3_k127_3093890_7 Peptidase dimerisation domain K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 293.0
BYD3_k127_3093890_9 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897,K12508 - 6.2.1.3,6.2.1.34 0.00000000000004272 76.0
BYD3_k127_3108007_0 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 470.0
BYD3_k127_3108007_1 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 333.0
BYD3_k127_3108007_2 Peptidase M16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 329.0
BYD3_k127_3108007_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 331.0
BYD3_k127_3108007_4 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003844 297.0
BYD3_k127_3108007_5 Zn peptidase K21686 - - 0.0000000000000000000000001314 114.0
BYD3_k127_3108007_7 sequence-specific DNA binding - - - 0.00009971 50.0
BYD3_k127_3114133_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 514.0
BYD3_k127_3114133_1 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 320.0
BYD3_k127_3114133_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000004659 217.0
BYD3_k127_3114133_3 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000001009 163.0
BYD3_k127_3114133_4 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000002895 76.0
BYD3_k127_3114133_5 Ribosomal protein L30 K02907 - - 0.00000000000001087 75.0
BYD3_k127_3177429_0 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 522.0
BYD3_k127_3177429_1 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 418.0
BYD3_k127_3177429_2 Glycosyl transferase 4-like - - - 0.00000000000000000000000000001528 125.0
BYD3_k127_3252154_0 Peptidoglycan-binding domain 1 protein - - - 0.0 2144.0
BYD3_k127_3252154_1 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1162.0
BYD3_k127_3252154_10 Redoxin - - - 0.0007745 42.0
BYD3_k127_3252154_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 8.478e-264 832.0
BYD3_k127_3252154_3 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00256 - 1.3.99.16 2.5e-255 813.0
BYD3_k127_3252154_4 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 560.0
BYD3_k127_3252154_5 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000472 392.0
BYD3_k127_3252154_6 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 357.0
BYD3_k127_3252154_7 [2Fe-2S] binding domain - - - 0.000000000000000000000000000000000000000000000000000000000008197 213.0
BYD3_k127_3252154_8 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000026 142.0
BYD3_k127_3252154_9 PFAM Alkyl hydroperoxide reductase - - - 0.000000000000000000008789 98.0
BYD3_k127_3252224_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 504.0
BYD3_k127_3252224_1 Dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 403.0
BYD3_k127_3252224_2 PFAM transferase hexapeptide repeat containing protein K00966 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 308.0
BYD3_k127_3257061_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1258.0
BYD3_k127_3257061_1 Phosphoglucose isomerase K01810,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005539 552.0
BYD3_k127_3257061_10 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000089 170.0
BYD3_k127_3257061_11 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000000000000000000000000000000000009895 153.0
BYD3_k127_3257061_12 Plasmid stabilization - - - 0.000000000000000000000000001879 113.0
BYD3_k127_3257061_13 Sigma-70 region 2 K03088 - - 0.00000000000000000001236 98.0
BYD3_k127_3257061_14 - - - - 0.000000000000004509 76.0
BYD3_k127_3257061_15 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000007158 74.0
BYD3_k127_3257061_17 Putative adhesin - - - 0.0000162 57.0
BYD3_k127_3257061_2 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000691 418.0
BYD3_k127_3257061_3 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004735 397.0
BYD3_k127_3257061_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 335.0
BYD3_k127_3257061_5 Actin K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001867 271.0
BYD3_k127_3257061_6 - - - - 0.000000000000000000000000000000000000000000000000000000000004594 231.0
BYD3_k127_3257061_7 Nicotinamidase K08281 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008936,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0018130,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043094,GO:0043173,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.5.1.19 0.0000000000000000000000000000000000000000000000000000000453 201.0
BYD3_k127_3257061_8 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000001422 173.0
BYD3_k127_3257061_9 Glycine D-amino acid oxidase (deaminating) - - - 0.0000000000000000000000000000000000000000004439 162.0
BYD3_k127_3265846_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 1.196e-309 959.0
BYD3_k127_3265846_1 PFAM peptidase - - - 2.394e-196 627.0
BYD3_k127_3265846_10 4Fe-4S double cluster binding domain K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 320.0
BYD3_k127_3265846_11 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 304.0
BYD3_k127_3265846_12 oxidoreductase activity K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007407 289.0
BYD3_k127_3265846_13 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001359 270.0
BYD3_k127_3265846_14 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000000000000000376 219.0
BYD3_k127_3265846_15 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 GO:0003674,GO:0003824,GO:0004416,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0019243,GO:0019752,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0051596,GO:0061727,GO:0071704,GO:1901575,GO:1901615 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000218 212.0
BYD3_k127_3265846_16 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000001069 171.0
BYD3_k127_3265846_17 WD domain, G-beta repeat - - - 0.000000000000000000000000000000000006559 156.0
BYD3_k127_3265846_18 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.00000000000000000000000000000000001457 145.0
BYD3_k127_3265846_19 Uncharacterized protein family UPF0016 - - - 0.0000000000000000000000003394 107.0
BYD3_k127_3265846_2 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006441 557.0
BYD3_k127_3265846_21 SnoaL-like domain - - - 0.00001513 55.0
BYD3_k127_3265846_3 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006723 516.0
BYD3_k127_3265846_4 Radical SAM superfamily K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 492.0
BYD3_k127_3265846_5 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 512.0
BYD3_k127_3265846_6 PFAM Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008874 396.0
BYD3_k127_3265846_7 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000536 362.0
BYD3_k127_3265846_8 PFAM Xanthine uracil vitamin C permease K06901 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007217 345.0
BYD3_k127_3265846_9 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 320.0
BYD3_k127_3269148_0 Tricorn protease homolog K08676 - - 3.864e-227 747.0
BYD3_k127_3269148_1 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 598.0
BYD3_k127_3269148_10 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000875 168.0
BYD3_k127_3269148_11 - - - - 0.000000000000000005691 91.0
BYD3_k127_3269148_12 Aldo/keto reductase family - - - 0.000000000006586 66.0
BYD3_k127_3269148_13 TPM domain K06872 - - 0.0000005024 59.0
BYD3_k127_3269148_14 Aldo/keto reductase family - - - 0.0001278 45.0
BYD3_k127_3269148_2 MviN-like protein K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 561.0
BYD3_k127_3269148_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 377.0
BYD3_k127_3269148_4 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 306.0
BYD3_k127_3269148_5 Beta-lactamase class C and other penicillin binding K01286 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009139 308.0
BYD3_k127_3269148_6 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005539 304.0
BYD3_k127_3269148_7 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 313.0
BYD3_k127_3269148_8 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001244 263.0
BYD3_k127_3269148_9 Pfam:DUF2029 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006472 258.0
BYD3_k127_3270587_0 Elongation factor G, domain IV K02355 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 356.0
BYD3_k127_3270587_1 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000001098 230.0
BYD3_k127_3270587_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000002576 226.0
BYD3_k127_3270587_3 - - - - 0.0000000000000000000000000000000000000000000000000001804 198.0
BYD3_k127_3270587_4 Tetratricopeptide repeat - - - 0.0000000000004919 78.0
BYD3_k127_3270587_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0005353 51.0
BYD3_k127_3291683_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 3.814e-311 965.0
BYD3_k127_3291683_1 ATP dependent DNA ligase C terminal region K10747 GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0030312,GO:0033554,GO:0034641,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 551.0
BYD3_k127_3291683_10 Lumazine binding domain K00793 GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000004474 219.0
BYD3_k127_3291683_11 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000005969 209.0
BYD3_k127_3291683_12 Surface antigen variable number - - - 0.00000000000000000000000000000000000000000000000000000005377 225.0
BYD3_k127_3291683_13 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000002607 178.0
BYD3_k127_3291683_14 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000009361 178.0
BYD3_k127_3291683_15 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000004162 176.0
BYD3_k127_3291683_16 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000004418 168.0
BYD3_k127_3291683_17 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000001293 160.0
BYD3_k127_3291683_18 Serine aminopeptidase, S33 K06889 - - 0.000000000000000000000000000000000000001894 158.0
BYD3_k127_3291683_19 Two component regulator propeller - - - 0.0000000000000000000000000000000000003388 163.0
BYD3_k127_3291683_2 Peptidase M56 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 477.0
BYD3_k127_3291683_20 AI-2E family transporter - - - 0.000000000000000000000000000000000947 146.0
BYD3_k127_3291683_21 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000007702 108.0
BYD3_k127_3291683_22 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.0000000000008904 74.0
BYD3_k127_3291683_23 protein conserved in bacteria K09800 - - 0.00000000004175 78.0
BYD3_k127_3291683_24 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03116,K03117 - - 0.00000000004807 68.0
BYD3_k127_3291683_25 peptidyl-prolyl cis-trans isomerase K03771 - 5.2.1.8 0.000003288 57.0
BYD3_k127_3291683_3 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005158 479.0
BYD3_k127_3291683_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003973 449.0
BYD3_k127_3291683_5 PFAM peptidase M19 renal dipeptidase K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 321.0
BYD3_k127_3291683_6 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 316.0
BYD3_k127_3291683_7 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 308.0
BYD3_k127_3291683_8 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000049,GO:0000154,GO:0001510,GO:0002935,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016426,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070040,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:0140102,GO:1901360,GO:1901363 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007481 288.0
BYD3_k127_3291683_9 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003414 259.0
BYD3_k127_3295353_0 Pfam:HxxPF_rpt - - - 0.0 2522.0
BYD3_k127_3295353_1 Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall - - - 0.0 1513.0
BYD3_k127_3295353_10 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000005896 207.0
BYD3_k127_3295353_11 PFAM MbtH domain protein K05375,K09190 - - 0.0000000000000000000000000000000000000000000000000001218 192.0
BYD3_k127_3295353_12 - - - - 0.000000000000000000000000000000000000000000000000002336 198.0
BYD3_k127_3295353_13 L-proline 3-hydroxylase, C-terminal - - - 0.00000000000000000000000000000000000000000000001107 182.0
BYD3_k127_3295353_14 acetyltransferase - - - 0.0000000000000000000000000000000000000000000005736 177.0
BYD3_k127_3295353_15 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K00836,K06136,K06137,K06138 GO:0005575,GO:0005576 1.3.3.11,2.6.1.76 0.000000000000000000000000000000000000000000002426 170.0
BYD3_k127_3295353_16 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000003093 160.0
BYD3_k127_3295353_17 L-proline 3-hydroxylase, C-terminal - - - 0.0000000000000000000000000000000000008619 149.0
BYD3_k127_3295353_18 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000007321 128.0
BYD3_k127_3295353_19 Phage integrase, N-terminal SAM-like domain K14059 - - 0.000000000000000000000000009297 115.0
BYD3_k127_3295353_2 non-ribosomal peptide synthetase - - - 5.232e-258 834.0
BYD3_k127_3295353_20 - - - - 0.00007605 53.0
BYD3_k127_3295353_21 Tetratricopeptide repeats - - - 0.000368 49.0
BYD3_k127_3295353_3 Alpha-L-arabinofuranosidase C-terminus K01209 - 3.2.1.55 2.312e-214 681.0
BYD3_k127_3295353_4 Glycosyl hydrolases family 31 - - - 5.756e-212 679.0
BYD3_k127_3295353_5 symbiont process K00612 - - 2.197e-196 632.0
BYD3_k127_3295353_6 TIGRFAM galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005805 475.0
BYD3_k127_3295353_7 inositol monophosphate 1-phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007989 421.0
BYD3_k127_3295353_8 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 424.0
BYD3_k127_3295353_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000005438 224.0
BYD3_k127_3320959_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 582.0
BYD3_k127_3320959_1 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007975 373.0
BYD3_k127_3320959_2 Wzt C-terminal domain K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 343.0
BYD3_k127_3320959_3 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000005758 203.0
BYD3_k127_3320959_4 Polysaccharide export protein K01991,K20988 - - 0.000000000000000000000000003404 123.0
BYD3_k127_3333276_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 GO:0000287,GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0008976,GO:0009267,GO:0009405,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0015968,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019538,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0036293,GO:0040007,GO:0042594,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044464,GO:0046777,GO:0046872,GO:0050896,GO:0051704,GO:0051716,GO:0070482,GO:0071496,GO:0071704,GO:0071944,GO:1901564 2.7.4.1 2.19e-211 678.0
BYD3_k127_3333276_1 Cyclomaltodextrinase, N-terminal K21575 - 3.2.1.135 4.816e-200 640.0
BYD3_k127_3333276_10 transcriptional regulator sugar kinase K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000004023 239.0
BYD3_k127_3333276_11 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000008012 224.0
BYD3_k127_3333276_12 TPR repeat - - - 0.00000000000000000000000000000000000000002334 170.0
BYD3_k127_3333276_13 PFAM ROK family protein - - - 0.000000000000000000000000000000000001321 146.0
BYD3_k127_3333276_14 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.00000000000000000000000000000000002747 143.0
BYD3_k127_3333276_15 protocatechuate 3,4-dioxygenase activity K00449 - 1.13.11.3 0.00000000000000000113 95.0
BYD3_k127_3333276_17 Domain of unknown function (DUF4956) - - - 0.00000000000668 76.0
BYD3_k127_3333276_18 DinB family - - - 0.0000000001133 68.0
BYD3_k127_3333276_2 PFAM Glycosyl hydrolases family 31 K01187 - 3.2.1.20 1.254e-199 649.0
BYD3_k127_3333276_3 Glucodextranase, domain N K01178 - 3.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 622.0
BYD3_k127_3333276_4 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006664 576.0
BYD3_k127_3333276_5 MFS/sugar transport protein K16211 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008154 532.0
BYD3_k127_3333276_6 Cyclomaltodextrinase, N-terminal K21575 - 3.2.1.135 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 518.0
BYD3_k127_3333276_7 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007522 490.0
BYD3_k127_3333276_8 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 327.0
BYD3_k127_3333276_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 290.0
BYD3_k127_343486_0 Belongs to the peptidase S1B family K01183,K03791 - 3.2.1.14 0.0 1193.0
BYD3_k127_343486_1 - - - - 0.0 1055.0
BYD3_k127_343486_10 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001045 268.0
BYD3_k127_343486_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000009668 244.0
BYD3_k127_343486_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000002195 227.0
BYD3_k127_343486_13 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000007506 187.0
BYD3_k127_343486_14 - - - - 0.00000000000000000000000000000000000004892 154.0
BYD3_k127_343486_15 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000009205 144.0
BYD3_k127_343486_16 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000000003542 142.0
BYD3_k127_343486_17 domain protein - - - 0.0000000000000000000000000000001891 129.0
BYD3_k127_343486_18 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.000000000000000000000000007069 117.0
BYD3_k127_343486_19 domain protein K14194 - - 0.000000000000000000008571 107.0
BYD3_k127_343486_2 - - - - 2.179e-316 986.0
BYD3_k127_343486_20 conserved protein (DUF2249) - - - 0.00000000000000003796 89.0
BYD3_k127_343486_21 domain protein - - - 0.00000000000002693 86.0
BYD3_k127_343486_23 - - - - 0.00001865 53.0
BYD3_k127_343486_3 - - - - 1.978e-298 932.0
BYD3_k127_343486_4 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 1.241e-218 691.0
BYD3_k127_343486_5 Belongs to the peptidase S1B family K01183,K03791 - 3.2.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 462.0
BYD3_k127_343486_6 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 374.0
BYD3_k127_343486_7 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007322 365.0
BYD3_k127_343486_8 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001358 283.0
BYD3_k127_343486_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001294 255.0
BYD3_k127_3477075_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372,K02567 - - 1.737e-290 908.0
BYD3_k127_3477075_1 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 524.0
BYD3_k127_3477075_10 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03014,K03055 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00006767 49.0
BYD3_k127_3477075_2 Voltage-dependent anion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 415.0
BYD3_k127_3477075_3 nitrite transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004868 327.0
BYD3_k127_3477075_4 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002542 238.0
BYD3_k127_3477075_5 Domain of Unknown function (DUF542) K07322 - - 0.0000000000000000000000000000000000000000000000000000000000000000004539 237.0
BYD3_k127_3477075_6 Crp-like helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000006818 229.0
BYD3_k127_3477075_7 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.00000000000000000000000000000001927 133.0
BYD3_k127_3477075_8 Protein of unknown function (DUF3565) - - - 0.00000000000000000000001278 101.0
BYD3_k127_3575765_0 Radical SAM - - - 5e-324 1004.0
BYD3_k127_3575765_1 WD domain, G-beta repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 573.0
BYD3_k127_3575765_10 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000747 145.0
BYD3_k127_3575765_11 protein serine/threonine phosphatase activity - - - 0.00000000000000000000002953 109.0
BYD3_k127_3575765_12 repeat-containing protein - - - 0.000000000000002859 85.0
BYD3_k127_3575765_13 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000007783 78.0
BYD3_k127_3575765_14 - - - - 0.0000009842 59.0
BYD3_k127_3575765_15 SPTR Tetratricopeptide TPR_2 repeat protein - - - 0.00001801 51.0
BYD3_k127_3575765_2 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007884 407.0
BYD3_k127_3575765_3 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008539 344.0
BYD3_k127_3575765_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 321.0
BYD3_k127_3575765_5 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 301.0
BYD3_k127_3575765_6 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000005867 244.0
BYD3_k127_3575765_7 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000001006 237.0
BYD3_k127_3575765_8 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000003719 241.0
BYD3_k127_3575765_9 PFAM Transglycosylase SLT domain K08309 - - 0.000000000000000000000000000000001771 143.0
BYD3_k127_3586185_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.0 1060.0
BYD3_k127_3586185_1 PFAM ABC transporter related K06020 - 3.6.3.25 6.392e-304 938.0
BYD3_k127_3586185_10 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 428.0
BYD3_k127_3586185_11 Ribonuclease E/G family K08300,K08301 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008996,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003834 412.0
BYD3_k127_3586185_12 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008868 369.0
BYD3_k127_3586185_13 Branched-chain amino acid transport system / permease component K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 335.0
BYD3_k127_3586185_14 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 326.0
BYD3_k127_3586185_15 PFAM ABC transporter related K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005912 313.0
BYD3_k127_3586185_16 ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 305.0
BYD3_k127_3586185_17 TIGRFAM argininosuccinate lyase K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000157 265.0
BYD3_k127_3586185_18 HhH-GPD superfamily base excision DNA repair protein - - - 0.000000000000000000000000000000000000000000000000000000000000001509 228.0
BYD3_k127_3586185_19 Putative cyclase K07130 - 3.5.1.9 0.000000000000000000000000000000000000000000000000004816 194.0
BYD3_k127_3586185_2 N-acetyldiaminopimelate deacetylase activity K12941 - - 1.131e-235 738.0
BYD3_k127_3586185_20 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000003383 177.0
BYD3_k127_3586185_21 Belongs to the UPF0145 family - - - 0.0000000000000000000000000000000000000000000006786 169.0
BYD3_k127_3586185_22 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000004301 167.0
BYD3_k127_3586185_23 May be involved in recombinational repair of damaged DNA K03631 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000243 166.0
BYD3_k127_3586185_24 PHP domain protein - - - 0.00000000000000000000000000000000000007606 156.0
BYD3_k127_3586185_25 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K07443 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0005488,GO:0005515,GO:0019899,GO:0097159,GO:1901363 2.1.1.63 0.00000000000000000000002516 104.0
BYD3_k127_3586185_26 Putative phosphatase (DUF442) - - - 0.0000000000000754 85.0
BYD3_k127_3586185_27 protein, possibly involved in aromatic compounds catabolism - - - 0.0000000000007244 73.0
BYD3_k127_3586185_28 Protein of unknown function (DUF983) - - - 0.0000000004629 65.0
BYD3_k127_3586185_29 lytic transglycosylase activity K03194 - - 0.0000004523 62.0
BYD3_k127_3586185_3 Carboxypeptidase regulatory-like domain - - - 2.214e-197 652.0
BYD3_k127_3586185_4 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 579.0
BYD3_k127_3586185_5 ABC transporter, transmembrane K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 564.0
BYD3_k127_3586185_6 ABC transporter transmembrane region K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 554.0
BYD3_k127_3586185_7 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 438.0
BYD3_k127_3586185_8 PFAM Aldo keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 434.0
BYD3_k127_3586185_9 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009316 450.0
BYD3_k127_3593541_0 Carboxypeptidase regulatory-like domain - - - 1.241e-228 747.0
BYD3_k127_3593541_1 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 544.0
BYD3_k127_3593541_10 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 348.0
BYD3_k127_3593541_11 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007872 345.0
BYD3_k127_3593541_12 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001214 281.0
BYD3_k127_3593541_14 Male sterility protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002504 263.0
BYD3_k127_3593541_15 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000005197 214.0
BYD3_k127_3593541_16 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000007208 207.0
BYD3_k127_3593541_17 - K07018 - - 0.0000000000000000000000000000000000000000000000008708 181.0
BYD3_k127_3593541_18 thiol-disulfide - - - 0.0000000000000000000000000000000000000000000004084 171.0
BYD3_k127_3593541_19 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000001479 180.0
BYD3_k127_3593541_2 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 559.0
BYD3_k127_3593541_20 photosynthesis - - - 0.000000000000000000000000000000000000000001591 161.0
BYD3_k127_3593541_21 chlorophyll binding - - - 0.00000000000000000000000000000000000005778 155.0
BYD3_k127_3593541_22 Belongs to the Fur family K09825 - - 0.0000000000000000000000000000003768 126.0
BYD3_k127_3593541_23 Thioesterase superfamily K10806 - - 0.000000000000000000000000000009913 122.0
BYD3_k127_3593541_24 Domain of unknown function (DUF4112) - - - 0.0000000000000000000000000002056 120.0
BYD3_k127_3593541_25 PFAM von Willebrand factor type A - - - 0.0000000000000000000000141 114.0
BYD3_k127_3593541_26 PAS domain K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000316 104.0
BYD3_k127_3593541_28 Polymer-forming cytoskeletal - - - 0.00000000000000002605 90.0
BYD3_k127_3593541_29 Cna protein B-type domain - - - 0.0000000000009747 82.0
BYD3_k127_3593541_3 Belongs to the 5'-nucleotidase family K11751 - 3.1.3.5,3.6.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 528.0
BYD3_k127_3593541_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 469.0
BYD3_k127_3593541_5 Transketolase, pyrimidine binding domain K00167 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 436.0
BYD3_k127_3593541_6 e3 binding domain K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 434.0
BYD3_k127_3593541_7 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005252 398.0
BYD3_k127_3593541_8 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006494 376.0
BYD3_k127_3593541_9 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 356.0
BYD3_k127_3596411_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 466.0
BYD3_k127_3596411_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 381.0
BYD3_k127_3596411_2 Glycosyl transferase family 4 K02851 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016043,GO:0016740,GO:0016772,GO:0016780,GO:0030145,GO:0034645,GO:0042546,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0045229,GO:0046872,GO:0046914,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:1901576 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000002047 260.0
BYD3_k127_3596411_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000004789 196.0
BYD3_k127_3596411_4 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000005916 184.0
BYD3_k127_3596411_5 PQQ-like domain - - - 0.0000000000000000000000000000000221 140.0
BYD3_k127_3596411_6 O-Antigen ligase K02847 - - 0.0000000000000000000000000000234 132.0
BYD3_k127_3596411_7 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.00000000000000000000008923 105.0
BYD3_k127_3596411_8 peptidyl-tyrosine sulfation - - - 0.0000000000000001856 92.0
BYD3_k127_3596411_9 Protein of unknown function (DUF465) - - - 0.0000001315 56.0
BYD3_k127_3608760_0 Dehydrogenase K02030,K03810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 533.0
BYD3_k127_3608760_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009267 297.0
BYD3_k127_3608760_2 Glycosyl transferase family 2 K16870 - 2.4.1.289 0.000000000000000000000000000000000000000000000000000000000000000003767 242.0
BYD3_k127_3608760_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000006782 209.0
BYD3_k127_3608760_4 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.00000000000000000009891 102.0
BYD3_k127_3608760_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000003048 59.0
BYD3_k127_3608760_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0009749 51.0
BYD3_k127_3611632_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 323.0
BYD3_k127_3611632_1 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000003512 137.0
BYD3_k127_3611632_2 helix_turn_helix, arabinose operon control protein K07506 - - 0.000000000000000000000000007649 121.0
BYD3_k127_3611849_0 Insecticide toxin TcdB middle/N-terminal region - - - 0.0 2259.0
BYD3_k127_3611849_1 Salmonella virulence plasmid 28.1kDa A protein K07127 GO:0006139,GO:0006144,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009112,GO:0009987,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:1901360,GO:1901564 3.5.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 565.0
BYD3_k127_3611849_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001722 244.0
BYD3_k127_3611849_3 protein involved in exopolysaccharide biosynthesis - - - 0.0000000000000000000143 110.0
BYD3_k127_3611849_4 Carboxypeptidase regulatory-like domain - - - 0.00000000000000001009 89.0
BYD3_k127_3611849_5 Phospholipid methyltransferase - - - 0.0000102 49.0
BYD3_k127_3613894_0 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 558.0
BYD3_k127_3613894_1 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 432.0
BYD3_k127_3613894_2 SCO1/SenC K07152,K08976 - - 0.000000000000000000000000000000000000000000000000000000000000001352 223.0
BYD3_k127_3613894_3 SCO1/SenC K07152,K08976 - - 0.0000000000000000000000000000000000000000000000000000000009262 210.0
BYD3_k127_3613894_5 cellulase activity - - - 0.0000000001241 75.0
BYD3_k127_3613894_6 Chaperone - - - 0.0000000004147 68.0
BYD3_k127_3658371_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 413.0
BYD3_k127_3658371_1 Radical SAM superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004646 257.0
BYD3_k127_3658371_2 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000001878 237.0
BYD3_k127_3658371_3 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000002106 190.0
BYD3_k127_3658371_4 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.000000725 55.0
BYD3_k127_3661165_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004105 580.0
BYD3_k127_3661165_1 ATPase activity K09013 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0071840 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 379.0
BYD3_k127_3661165_2 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 360.0
BYD3_k127_3661165_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000000000000000009439 218.0
BYD3_k127_3661165_4 NifU-like N terminal domain K04488 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0030003,GO:0036455,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071704,GO:0097428,GO:0098771,GO:1901564 - 0.000000000000000000000000000000000000000000000000000002699 194.0
BYD3_k127_3661209_0 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000002843 153.0
BYD3_k127_3661209_1 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000001436 100.0
BYD3_k127_3661209_2 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000000000000002679 85.0
BYD3_k127_3661209_3 Tetratricopeptide repeat - - - 0.0000000000004131 83.0
BYD3_k127_3713031_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 2.459e-286 902.0
BYD3_k127_3713031_1 Carboxypeptidase regulatory-like domain - - - 8.656e-273 867.0
BYD3_k127_3713031_10 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000003189 182.0
BYD3_k127_3713031_12 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000005578 167.0
BYD3_k127_3713031_13 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000001472 166.0
BYD3_k127_3713031_14 Electron transporter SenC - - - 0.0000000000000000000000000000000003145 139.0
BYD3_k127_3713031_15 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000000000000001654 105.0
BYD3_k127_3713031_16 Thioredoxin-like K02199 - - 0.00000000000000000000926 100.0
BYD3_k127_3713031_17 Protein of unknown function with PCYCGC motif - - - 0.00000000000000000007288 95.0
BYD3_k127_3713031_18 Tetratricopeptide repeat - - - 0.000000000000000002914 98.0
BYD3_k127_3713031_19 PFAM helix-turn-helix- domain containing protein AraC type - - - 0.00000000000002585 79.0
BYD3_k127_3713031_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 398.0
BYD3_k127_3713031_20 BrnA antitoxin of type II toxin-antitoxin system - - - 0.0000000000008209 72.0
BYD3_k127_3713031_21 Copper binding periplasmic protein CusF - - - 0.00002668 51.0
BYD3_k127_3713031_22 Multicopper oxidase - - - 0.0003415 46.0
BYD3_k127_3713031_3 Phytanoyl-CoA dioxygenase (PhyH) K00477 - 1.14.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 374.0
BYD3_k127_3713031_4 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 368.0
BYD3_k127_3713031_5 Bilirubin oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 332.0
BYD3_k127_3713031_6 PFAM Peptidase M19, renal dipeptidase K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 313.0
BYD3_k127_3713031_7 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000005375 235.0
BYD3_k127_3713031_8 Redoxin K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000001798 201.0
BYD3_k127_3713031_9 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000001629 219.0
BYD3_k127_3723334_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 569.0
BYD3_k127_3723334_1 Aminoglycoside phosphotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009355 419.0
BYD3_k127_3723334_2 Large extracellular alpha-helical protein K06894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001362 261.0
BYD3_k127_3723334_3 Tetratricopeptide repeat - - - 0.00000000000000000000000001727 119.0
BYD3_k127_3724984_0 Vault protein inter-alpha-trypsin domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 634.0
BYD3_k127_3724984_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 370.0
BYD3_k127_3724984_2 PFAM peptidase K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 316.0
BYD3_k127_3724984_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000001279 171.0
BYD3_k127_3724984_4 TIGRFAM TonB K03832 - - 0.000000000000000000002916 106.0
BYD3_k127_3724984_5 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000008457 69.0
BYD3_k127_3801821_0 serine-type peptidase activity - - - 0.0 1084.0
BYD3_k127_3801821_1 Peptidase family M3 K01284 - 3.4.15.5 0.0 1075.0
BYD3_k127_3801821_10 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 297.0
BYD3_k127_3801821_11 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000005248 269.0
BYD3_k127_3801821_12 Belongs to the BI1 family K06890,K19416 - - 0.0000000000000000000000000000000000000000000000000000002077 202.0
BYD3_k127_3801821_13 CHASE2 - - - 0.000000000000000000000000000000000000000000000001634 196.0
BYD3_k127_3801821_14 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000003113 146.0
BYD3_k127_3801821_15 SET domain K07117 - - 0.0000000000000000000000000000002869 127.0
BYD3_k127_3801821_16 - - - - 0.000000000000000000000000001402 120.0
BYD3_k127_3801821_17 Cold-Shock Protein K03704 - - 0.0000000000000000000000002911 106.0
BYD3_k127_3801821_19 PFAM peptidase S1 and S6 chymotrypsin Hap K04771 - 3.4.21.107 0.000004171 59.0
BYD3_k127_3801821_2 hydrolase family 92 - - - 1.108e-302 959.0
BYD3_k127_3801821_20 - - - - 0.0004181 48.0
BYD3_k127_3801821_3 ThiS family K21029,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 564.0
BYD3_k127_3801821_4 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 580.0
BYD3_k127_3801821_5 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 520.0
BYD3_k127_3801821_6 Highly conserved protein containing a thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 490.0
BYD3_k127_3801821_7 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 388.0
BYD3_k127_3801821_8 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 383.0
BYD3_k127_3801821_9 NB-ARC domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 353.0
BYD3_k127_3840233_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 8.23e-305 954.0
BYD3_k127_3840233_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.867e-212 681.0
BYD3_k127_3840233_10 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000000001834 197.0
BYD3_k127_3840233_11 - - - - 0.000000000000000000000000000000000000000000000000000002175 203.0
BYD3_k127_3840233_12 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000004442 175.0
BYD3_k127_3840233_13 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000006581 158.0
BYD3_k127_3840233_14 Peptidase family M23 - - - 0.0000000000000000000000000000000000000003657 163.0
BYD3_k127_3840233_15 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000000000009477 132.0
BYD3_k127_3840233_16 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000004979 105.0
BYD3_k127_3840233_17 - - - - 0.000000000000000001043 94.0
BYD3_k127_3840233_18 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.000000000000000001505 93.0
BYD3_k127_3840233_19 Belongs to the small heat shock protein (HSP20) family - - - 0.000000000002195 73.0
BYD3_k127_3840233_2 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 556.0
BYD3_k127_3840233_20 Domain of unknown function (DUF4956) - - - 0.000000000002766 77.0
BYD3_k127_3840233_21 - - - - 0.00000000001675 75.0
BYD3_k127_3840233_22 - - - - 0.00000000004132 72.0
BYD3_k127_3840233_23 COG1278 Cold shock proteins K03704 - - 0.00000000007303 63.0
BYD3_k127_3840233_24 Periplasmic or secreted lipoprotein - - - 0.0000000005746 72.0
BYD3_k127_3840233_25 - - - - 0.000000005186 66.0
BYD3_k127_3840233_26 Putative zinc-finger - - - 0.000241 51.0
BYD3_k127_3840233_27 Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation - GO:0005575,GO:0016020 - 0.0002437 51.0
BYD3_k127_3840233_3 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 459.0
BYD3_k127_3840233_4 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 359.0
BYD3_k127_3840233_5 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 329.0
BYD3_k127_3840233_6 Lysin motif K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001163 275.0
BYD3_k127_3840233_7 Peptidase, M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000137 268.0
BYD3_k127_3840233_8 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000003688 223.0
BYD3_k127_3840233_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000009663 219.0
BYD3_k127_38560_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.689e-274 852.0
BYD3_k127_38560_1 Polysulphide reductase, NrfD K00185 - - 5.571e-220 689.0
BYD3_k127_38560_10 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000000000000000000000000005598 231.0
BYD3_k127_38560_11 spore germination - - - 0.00000000000000000000000000000000000000000000000000000000004452 215.0
BYD3_k127_38560_12 - - - - 0.00000000000000000000000000000000000000000000000000009393 194.0
BYD3_k127_38560_13 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000004185 192.0
BYD3_k127_38560_14 HIT domain K02503 - - 0.00000000000000000000000000000000000001047 147.0
BYD3_k127_38560_15 Ferredoxin K00529,K04755,K08952,K08953,K08954,K15765 GO:0005575,GO:0005622,GO:0005623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464,GO:0046858 1.18.1.3 0.0000000000000000000000000000000001104 146.0
BYD3_k127_38560_16 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.000000000000000000008401 96.0
BYD3_k127_38560_17 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.00000000003265 66.0
BYD3_k127_38560_18 - - - - 0.0007743 49.0
BYD3_k127_38560_2 Phosphoenolpyruvate carboxykinase K01610 - 4.1.1.49 8.501e-212 670.0
BYD3_k127_38560_3 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 531.0
BYD3_k127_38560_4 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 497.0
BYD3_k127_38560_5 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 389.0
BYD3_k127_38560_6 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006627 376.0
BYD3_k127_38560_7 signal sequence binding K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006658 295.0
BYD3_k127_38560_8 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000006231 253.0
BYD3_k127_38560_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000101 242.0
BYD3_k127_3901145_0 DEAD DEAH box helicase K03724 - - 0.0 1729.0
BYD3_k127_3901145_1 metallocarboxypeptidase activity K14054 - - 1.815e-285 908.0
BYD3_k127_3901145_10 Putative glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 435.0
BYD3_k127_3901145_11 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 426.0
BYD3_k127_3901145_12 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 404.0
BYD3_k127_3901145_13 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0010035,GO:0010038,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0046686,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 361.0
BYD3_k127_3901145_14 radical SAM domain protein K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 352.0
BYD3_k127_3901145_15 Homoserine dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 299.0
BYD3_k127_3901145_16 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002788 268.0
BYD3_k127_3901145_17 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001022 267.0
BYD3_k127_3901145_18 helix_turn_helix gluconate operon transcriptional repressor K07978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001102 255.0
BYD3_k127_3901145_19 Xylose isomerase-like TIM barrel K06606 - 5.3.99.11 0.000000000000000000000000000000000000000000000000000000000000000779 228.0
BYD3_k127_3901145_2 metalloendopeptidase activity K01283 - 3.4.15.1 3.089e-258 811.0
BYD3_k127_3901145_20 Aerotolerance regulator N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000002242 242.0
BYD3_k127_3901145_21 Belongs to the UPF0502 family K09915 - - 0.000000000000000000000000000000000000000000000000000000001661 207.0
BYD3_k127_3901145_22 Domain of unknown function (DUF4159) - - - 0.000000000000000000000000000000000000000000000000003471 192.0
BYD3_k127_3901145_23 Peptidase C14 caspase catalytic subunit p20 - - - 0.0000000000000000000000000000000000000000000003553 179.0
BYD3_k127_3901145_24 oxidoreductase activity K12511 - - 0.000000000000000000000000000000000000001717 159.0
BYD3_k127_3901145_25 metal cluster binding - - - 0.00000000000000000000000000000000001199 146.0
BYD3_k127_3901145_26 PFAM HNH endonuclease - - - 0.0000000000000000000000000000009649 128.0
BYD3_k127_3901145_27 Iron-binding zinc finger CDGSH type - - - 0.00000000000000000000000283 113.0
BYD3_k127_3901145_28 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000002001 85.0
BYD3_k127_3901145_29 Cytochrome c - - - 0.0000000000000007034 84.0
BYD3_k127_3901145_3 TROVE domain - - - 1.133e-209 666.0
BYD3_k127_3901145_4 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008575 571.0
BYD3_k127_3901145_5 family UPF0027 K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 529.0
BYD3_k127_3901145_6 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 474.0
BYD3_k127_3901145_7 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 496.0
BYD3_k127_3901145_8 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 453.0
BYD3_k127_3901145_9 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 415.0
BYD3_k127_3931432_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 506.0
BYD3_k127_3931432_1 PFAM RimK-like ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 411.0
BYD3_k127_3931432_2 PFAM RimK domain protein ATP-grasp - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007295 376.0
BYD3_k127_3931432_3 Chitin-binding domain type 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 299.0
BYD3_k127_3931432_4 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000003737 233.0
BYD3_k127_3931432_5 ORF6N domain - - - 0.00000000000000000000001451 105.0
BYD3_k127_3931432_7 PrcB C-terminal - - - 0.0001034 52.0
BYD3_k127_3943043_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009616 513.0
BYD3_k127_3943043_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006354 348.0
BYD3_k127_3943043_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000003962 265.0
BYD3_k127_3943043_3 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000000117 104.0
BYD3_k127_3943043_4 InterPro IPR007367 - - - 0.0000000000000000000001779 98.0
BYD3_k127_3943043_5 - - - - 0.000000000000002188 83.0
BYD3_k127_3983826_0 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002442 240.0
BYD3_k127_3983826_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000008315 186.0
BYD3_k127_3983826_2 Protein of unknown function DUF115 - - - 0.000000000000000000000003441 113.0
BYD3_k127_3983826_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins - - - 0.000000000000000004096 89.0
BYD3_k127_3999539_0 SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556 K00239 GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0022900,GO:0044237,GO:0045333,GO:0055114 1.3.5.1,1.3.5.4 8.889e-276 858.0
BYD3_k127_3999539_1 Penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928 472.0
BYD3_k127_3999539_10 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000001571 270.0
BYD3_k127_3999539_11 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000004204 261.0
BYD3_k127_3999539_12 Peptidase family M50 K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005669 263.0
BYD3_k127_3999539_13 Sulfate ABC transporter substrate-binding protein K02048 - - 0.000000000000000000000000000000000000000000000000000000000000000000136 242.0
BYD3_k127_3999539_14 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000000000000000000003004 253.0
BYD3_k127_3999539_15 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000007766 238.0
BYD3_k127_3999539_16 orotate phosphoribosyltransferase activity K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000001021 224.0
BYD3_k127_3999539_17 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000001005 209.0
BYD3_k127_3999539_18 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000001194 210.0
BYD3_k127_3999539_19 TIGRFAM sulfate ABC transporter, inner membrane subunit CysT K02046 - - 0.000000000000000000000000000000000000000000000000000007328 199.0
BYD3_k127_3999539_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 430.0
BYD3_k127_3999539_20 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000003791 186.0
BYD3_k127_3999539_21 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000001366 184.0
BYD3_k127_3999539_22 succinate dehydrogenase K00241 - - 0.00000000000000000000000000000000000000000000002557 178.0
BYD3_k127_3999539_23 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02342,K03763 - 2.7.7.7 0.0000000000000000000000000000000000000009909 160.0
BYD3_k127_3999539_24 PFAM phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.00000000000000000000000000000000000001125 154.0
BYD3_k127_3999539_25 LigT like Phosphoesterase K01975 - 3.1.4.58 0.000000000000000000000000001218 119.0
BYD3_k127_3999539_26 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000001552 120.0
BYD3_k127_3999539_27 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000005125 102.0
BYD3_k127_3999539_28 PFAM SNARE associated Golgi protein - - - 0.0000000000000000001835 97.0
BYD3_k127_3999539_29 PFAM SNARE associated Golgi protein - - - 0.000000000000000001104 93.0
BYD3_k127_3999539_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 398.0
BYD3_k127_3999539_30 - - - - 0.00000000003218 74.0
BYD3_k127_3999539_31 Serine aminopeptidase, S33 - - - 0.0000817 54.0
BYD3_k127_3999539_4 SpoIVB peptidase S55 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 366.0
BYD3_k127_3999539_5 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 325.0
BYD3_k127_3999539_6 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 330.0
BYD3_k127_3999539_7 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 301.0
BYD3_k127_3999539_8 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000672 295.0
BYD3_k127_3999539_9 Oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008271 274.0
BYD3_k127_4196273_0 Amidohydrolase family - - - 4.203e-214 672.0
BYD3_k127_4196273_1 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000001794 253.0
BYD3_k127_4196273_2 - - - - 0.000000000000000000000000002437 116.0
BYD3_k127_4196273_3 oxidoreductase activity - - - 0.0000000000000004694 87.0
BYD3_k127_4196273_4 Polymer-forming cytoskeletal - - - 0.00000000008905 68.0
BYD3_k127_4224869_0 proline dipeptidase activity K01271 - 3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008552 505.0
BYD3_k127_4224869_1 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K02029,K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 356.0
BYD3_k127_4224869_2 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006214 251.0
BYD3_k127_4224869_3 Major facilitator superfamily K08169 - - 0.0000000000007879 72.0
BYD3_k127_4249735_0 Flotillin K07192 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007188 398.0
BYD3_k127_4249735_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002451 283.0
BYD3_k127_4249735_2 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000183 130.0
BYD3_k127_4249735_3 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000002353 109.0
BYD3_k127_4249735_4 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000002355 84.0
BYD3_k127_4249735_5 Lipopolysaccharide-assembly - - - 0.0000000000000001197 87.0
BYD3_k127_4249735_6 - - - - 0.0000000004182 68.0
BYD3_k127_4249735_7 - - - - 0.0000004365 57.0
BYD3_k127_4257383_0 Transport of potassium into the cell K03549 - - 9.142e-250 786.0
BYD3_k127_4257383_1 Histidine kinase K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004058 317.0
BYD3_k127_4257383_2 response regulator, receiver K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 290.0
BYD3_k127_4275401_0 Pkd domain containing protein K07407 - 3.2.1.22 1.046e-222 705.0
BYD3_k127_4275401_1 PFAM Glycoside hydrolase, family 29 K01206 - 3.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 386.0
BYD3_k127_4275401_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01707 - 4.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 334.0
BYD3_k127_4275401_3 Alpha galactosidase A K07407 - 3.2.1.22 0.00000000000000000009126 98.0
BYD3_k127_4319140_0 FAD linked oxidases, C-terminal domain K06911 - - 2.962e-276 862.0
BYD3_k127_4319140_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000002559 212.0
BYD3_k127_4322819_0 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 299.0
BYD3_k127_4322819_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000003559 236.0
BYD3_k127_4322819_2 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000928 50.0
BYD3_k127_4331954_0 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 2.076e-219 692.0
BYD3_k127_4331954_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004929 487.0
BYD3_k127_4331954_2 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006125 432.0
BYD3_k127_4331954_3 PFAM peptidase S1 and S6, chymotrypsin Hap K04771,K04772 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000002035 282.0
BYD3_k127_4331954_4 Oxidoreductase NAD-binding domain protein K02030,K03810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001651 253.0
BYD3_k127_4331954_5 SMART PAS domain containing protein - - - 0.000000000000000002255 92.0
BYD3_k127_438349_0 Domain of unknown function (DUF5117) - - - 2e-323 1011.0
BYD3_k127_438349_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 1.012e-302 948.0
BYD3_k127_438349_10 membrane - - - 0.0000007167 63.0
BYD3_k127_438349_2 peptidase M24B X-Pro dipeptidase aminopeptidase domain protein K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009864 450.0
BYD3_k127_438349_3 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 293.0
BYD3_k127_438349_4 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000002431 258.0
BYD3_k127_438349_5 PFAM Peptidase family M23 K21472 - - 0.0000000000000000000000000000000000000000000001049 175.0
BYD3_k127_438349_6 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000003092 187.0
BYD3_k127_438349_7 GDP-mannose mannosyl hydrolase activity K01858,K03207,K03574 - 3.6.1.55,5.5.1.4 0.00000000000000000000000000000000000000000002883 166.0
BYD3_k127_438349_8 PFAM carbon monoxide dehydrogenase subunit G K09386 - - 0.00000000000000000000000000000000001209 143.0
BYD3_k127_4426074_0 ADP-glyceromanno-heptose 6-epimerase activity K01710,K01784,K21211 - 4.2.1.46,5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008393 396.0
BYD3_k127_4426074_1 UDP-N-acetylglucosamine 2-epimerase K08068,K18429 - 3.2.1.183,3.2.1.184 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 390.0
BYD3_k127_4426074_2 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006653 372.0
BYD3_k127_4426074_3 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000001081 228.0
BYD3_k127_4426074_4 TIGRFAM Sialic acid O-acyltransferase, NeuD - - - 0.00000000000000000000000000000000000000000000000000000001219 204.0
BYD3_k127_4426074_5 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000002635 203.0
BYD3_k127_4434981_0 Replicative DNA helicase K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009365 355.0
BYD3_k127_4434981_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000001526 194.0
BYD3_k127_4434981_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000001868 178.0
BYD3_k127_4434981_3 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000005721 148.0
BYD3_k127_4434981_4 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000000151 111.0
BYD3_k127_4434981_5 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000006287 94.0
BYD3_k127_4563753_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 555.0
BYD3_k127_4563753_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009586 535.0
BYD3_k127_4563753_2 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 511.0
BYD3_k127_4563753_3 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 436.0
BYD3_k127_4563753_4 Heparinase II/III-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 328.0
BYD3_k127_4567330_0 Carboxypeptidase regulatory-like domain - - - 7.701e-246 794.0
BYD3_k127_4567330_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 442.0
BYD3_k127_4567330_2 Transcriptional regulatory protein, C terminal K07662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 309.0
BYD3_k127_4567330_3 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000003976 227.0
BYD3_k127_4567330_4 Amino acid polyamine organocation transporter, APC superfamily K03294 - - 0.000000000000000000000000000000000005943 143.0
BYD3_k127_4567330_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07640 - 2.7.13.3 0.0003225 49.0
BYD3_k127_4589320_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 365.0
BYD3_k127_4589320_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008793 308.0
BYD3_k127_4589320_2 Peptidase family M23 K21472 - - 0.00000000000000000000000000000000000000000000008941 175.0
BYD3_k127_4589320_3 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000003584 163.0
BYD3_k127_4589320_4 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.000000000000000000000000000002464 134.0
BYD3_k127_4589320_5 ErfK ybiS ycfS ynhG family protein K16291 - - 0.00000000000106 80.0
BYD3_k127_4597592_0 AMP-binding enzyme - - - 0.0 1592.0
BYD3_k127_4597592_1 TIGRFAM amino acid adenylation domain - - - 7.006e-292 924.0
BYD3_k127_4597592_2 - - - - 0.000186 48.0
BYD3_k127_4600248_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 322.0
BYD3_k127_4600248_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000008943 167.0
BYD3_k127_4616421_0 Multicopper oxidase - - - 0.0 1708.0
BYD3_k127_4616421_1 alpha-L-arabinofuranosidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004819 586.0
BYD3_k127_4616421_2 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008693 544.0
BYD3_k127_4616421_3 Bacterial regulatory protein, Fis family K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008254 257.0
BYD3_k127_4616421_4 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.00000000000000000000000000000000000000000000000000000000001407 220.0
BYD3_k127_4616421_5 SCO1/SenC K07152,K08976 - - 0.0000000000000000000000000000000000000000000004173 175.0
BYD3_k127_4616421_6 pathogenesis - - - 0.0000000007008 73.0
BYD3_k127_4616421_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993,K02005 - - 0.0002518 51.0
BYD3_k127_4655887_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0040007,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004526 372.0
BYD3_k127_4655887_1 PFAM Alcohol dehydrogenase K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 320.0
BYD3_k127_4655887_2 Cytochrome c - - - 0.000000000000001048 81.0
BYD3_k127_4661229_0 efflux transmembrane transporter activity K02004 - - 3.064e-236 757.0
BYD3_k127_4661229_1 Sugar (and other) transporter - - - 1.678e-205 650.0
BYD3_k127_4661229_10 BON domain K04065 - - 0.0007768 49.0
BYD3_k127_4661229_2 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 561.0
BYD3_k127_4661229_3 Domain of unknown function (DUF4070) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 495.0
BYD3_k127_4661229_4 Transmembrane secretion effector K08225 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007234 371.0
BYD3_k127_4661229_5 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008022 357.0
BYD3_k127_4661229_6 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 305.0
BYD3_k127_4661229_7 Domain of unknown function (DUF4160) - - - 0.000000000000000000000000000000000001635 140.0
BYD3_k127_4661229_8 Protein of unknown function (DUF2442) - - - 0.000000000000000003852 86.0
BYD3_k127_4661229_9 RNA polymerase-associated protein CTR9 homolog K15176 GO:0000122,GO:0000428,GO:0000785,GO:0000993,GO:0001098,GO:0001099,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0008023,GO:0008150,GO:0008152,GO:0008213,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009909,GO:0009910,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0016020,GO:0016043,GO:0016569,GO:0016570,GO:0016571,GO:0016591,GO:0016593,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0030880,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032259,GO:0032268,GO:0032270,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033043,GO:0033044,GO:0034243,GO:0034968,GO:0035327,GO:0036211,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048581,GO:0048831,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051568,GO:0051569,GO:0051571,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070063,GO:0071704,GO:0071840,GO:0080090,GO:0080182,GO:1901564,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1905269,GO:1990234,GO:2000026,GO:2000112,GO:2000113,GO:2000241,GO:2000242,GO:2001141,GO:2001252 - 0.00069 52.0
BYD3_k127_4703137_0 Aconitase C-terminal domain K01703 - 4.2.1.33,4.2.1.35 4.129e-279 872.0
BYD3_k127_4703137_1 Peptidase dimerisation domain K01436 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007596 284.0
BYD3_k127_4703137_2 DinB family - - - 0.000000000000000000000000000000000000000000942 162.0
BYD3_k127_4703137_3 ECF sigma factor K03088 - - 0.0001164 46.0
BYD3_k127_471088_0 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 580.0
BYD3_k127_471088_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 553.0
BYD3_k127_471088_10 eight transmembrane protein EpsH - - - 0.000000000000000000000000000000000000000000000000000000000000009665 229.0
BYD3_k127_471088_11 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000000007841 223.0
BYD3_k127_471088_12 Photosynthesis system II assembly factor YCF48 - - - 0.0000000000000000000000000000000000000000000000000005056 197.0
BYD3_k127_471088_13 ADP-L-glycero-beta-D-manno-heptose biosynthetic process K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000025 171.0
BYD3_k127_471088_14 Chain length determinant protein - - - 0.00000000000000000000000000000000000002486 162.0
BYD3_k127_471088_15 ATP hydrolysis coupled proton transport K02123 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000007652 150.0
BYD3_k127_471088_16 protein methyltransferase activity K02687 - - 0.0000000000000000000000000000000004365 140.0
BYD3_k127_471088_17 Capsular exopolysaccharide family - - - 0.000000000000000000000000000000002831 142.0
BYD3_k127_471088_19 candidate b-glycosidase, glycoside hydrolase family 8 protein - - - 0.00000000000000001349 99.0
BYD3_k127_471088_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 458.0
BYD3_k127_471088_20 DUF218 domain - - - 0.00000000000000008496 88.0
BYD3_k127_471088_22 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01991 - - 0.00000000000001918 83.0
BYD3_k127_471088_24 peptidyl-tyrosine sulfation - - - 0.00003956 55.0
BYD3_k127_471088_3 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 405.0
BYD3_k127_471088_4 Heparinase II/III-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 366.0
BYD3_k127_471088_5 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 344.0
BYD3_k127_471088_6 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 332.0
BYD3_k127_471088_7 protein methyltransferase activity K00568,K02687 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 306.0
BYD3_k127_471088_8 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002032 297.0
BYD3_k127_471088_9 AAA domain K02450 - - 0.000000000000000000000000000000000000000000000000000000000000002532 228.0
BYD3_k127_4766948_0 serine-type peptidase activity - - - 1.072e-266 844.0
BYD3_k127_4766948_1 Amidase K01426 - 3.5.1.4 7.575e-205 651.0
BYD3_k127_4766948_10 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.00000000006084 70.0
BYD3_k127_4766948_11 Nacht domain K06966 - 3.2.2.10 0.0000001129 66.0
BYD3_k127_4766948_12 - - - - 0.000006351 53.0
BYD3_k127_4766948_2 PFAM WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 550.0
BYD3_k127_4766948_3 - K20543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 508.0
BYD3_k127_4766948_4 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 437.0
BYD3_k127_4766948_5 Domain of unknown function (DUF4287) - - - 0.00000000000000000000000000000000000000000000000000000000000000000004829 237.0
BYD3_k127_4766948_6 Caspase domain - - - 0.0000000000000000000000000000000000000000000000000000003365 206.0
BYD3_k127_4766948_7 Esterase of the alpha-beta hydrolase superfamily K07001 GO:0003674,GO:0003824,GO:0016787 - 0.0000000000000000000000000000000000000000000000003725 192.0
BYD3_k127_4766948_8 Belongs to the UPF0102 family K07460 - - 0.0000000000000005878 83.0
BYD3_k127_4766948_9 Esterase of the alpha-beta hydrolase superfamily K07001 GO:0003674,GO:0003824,GO:0016787 - 0.000000000000001218 80.0
BYD3_k127_4884253_0 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002374 287.0
BYD3_k127_4884253_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K11177 - 1.17.1.4 0.0000000000000000000000000000000000000000000002562 175.0
BYD3_k127_4884253_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000001227 104.0
BYD3_k127_4884253_3 Protein of unknown function (DUF1326) - - - 0.0000000000000000001869 96.0
BYD3_k127_4886683_0 Belongs to the peptidase S8 family K08651 - 3.4.21.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009729 460.0
BYD3_k127_4886683_1 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000008994 186.0
BYD3_k127_4902301_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1107.0
BYD3_k127_4902301_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.676e-218 690.0
BYD3_k127_4902301_10 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 368.0
BYD3_k127_4902301_11 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 329.0
BYD3_k127_4902301_12 von Willebrand factor (vWF) type A domain K02448 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 339.0
BYD3_k127_4902301_13 with different specificities (related to short-chain alcohol K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000048 276.0
BYD3_k127_4902301_14 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000008073 160.0
BYD3_k127_4902301_15 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000331 158.0
BYD3_k127_4902301_16 Hsp20/alpha crystallin family K13993 - - 0.00000000000000000000000008034 111.0
BYD3_k127_4902301_17 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.0000000000000000003214 96.0
BYD3_k127_4902301_2 Cytochrome c - - - 1.046e-206 653.0
BYD3_k127_4902301_3 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 1.143e-196 625.0
BYD3_k127_4902301_4 Hydantoinase/oxoprolinase K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 594.0
BYD3_k127_4902301_5 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 495.0
BYD3_k127_4902301_6 C-terminal, D2-small domain, of ClpB protein K03696 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0008150,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030312,GO:0040007,GO:0042802,GO:0042803,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005973 475.0
BYD3_k127_4902301_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000751 441.0
BYD3_k127_4902301_8 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 417.0
BYD3_k127_4902301_9 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 409.0
BYD3_k127_4906574_0 NAD(P)-binding Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009455 529.0
BYD3_k127_4906574_1 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007946 461.0
BYD3_k127_4906574_2 FAD dependent oxidoreductase K00303,K21061 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 458.0
BYD3_k127_4906574_3 Proline racemase K12658 - 5.1.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 421.0
BYD3_k127_4906574_4 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714,K21062 - 3.5.4.22,4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000008611 246.0
BYD3_k127_4906574_5 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000005602 94.0
BYD3_k127_4906574_6 PFAM transglutaminase domain protein - - - 0.000000000000001119 93.0
BYD3_k127_4906574_7 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000006114 69.0
BYD3_k127_4906574_8 FecR protein - - - 0.0003141 55.0
BYD3_k127_4924102_0 Zinc carboxypeptidase K01278 - 3.4.14.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000746 605.0
BYD3_k127_4924102_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain II K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007219 390.0
BYD3_k127_4924102_2 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000001293 211.0
BYD3_k127_4928565_0 homoserine kinase activity K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008174 513.0
BYD3_k127_4928565_1 ATPases associated with a variety of cellular activities K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000000002002 239.0
BYD3_k127_4928565_2 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000002114 162.0
BYD3_k127_4928565_3 homoserine kinase activity K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000004479 80.0
BYD3_k127_4947069_0 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 601.0
BYD3_k127_4947069_1 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 415.0
BYD3_k127_4947069_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 355.0
BYD3_k127_4947069_3 Peptidase dimerisation domain K01436 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008113 272.0
BYD3_k127_4947069_4 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000007617 197.0
BYD3_k127_4947069_5 - - - - 0.00000000001862 70.0
BYD3_k127_4947069_6 Nacht domain - - - 0.00000004684 66.0
BYD3_k127_4963819_0 PFAM Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 617.0
BYD3_k127_4963819_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 327.0
BYD3_k127_4963819_2 - - - - 0.000000000000000000000000000000000000000000000177 183.0
BYD3_k127_4963819_3 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000005068 159.0
BYD3_k127_4963819_4 TIGRFAM VWFA-related Acidobacterial domain - - - 0.00000000000000000000000000000001728 144.0
BYD3_k127_4964475_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 8.679e-267 829.0
BYD3_k127_4964475_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 306.0
BYD3_k127_4964475_2 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000005887 204.0
BYD3_k127_4964475_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000009087 158.0
BYD3_k127_4964475_4 SMART PDZ DHR GLGF domain protein K11749 - - 0.000000001518 66.0
BYD3_k127_4964475_5 PFAM helix-turn-helix, Fis-type - - - 0.0000001182 59.0
BYD3_k127_4982014_0 Vault protein inter-alpha-trypsin domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005486 495.0
BYD3_k127_4982014_1 Vault protein inter-alpha-trypsin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000757 442.0
BYD3_k127_4982014_2 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 316.0
BYD3_k127_4982014_3 - - - - 0.00000000000000000000000000000000000000000000000003368 184.0
BYD3_k127_4982014_4 Transmembrane exosortase (Exosortase_EpsH) - - - 0.00000000000000000000000000000000000000000002952 171.0
BYD3_k127_4982014_5 XdhC Rossmann domain K07402 - - 0.0000000000000000000000000000000000000000008221 166.0
BYD3_k127_4982014_6 Photosynthesis system II assembly factor YCF48 - - - 0.0000000000000000000000000000000000001253 154.0
BYD3_k127_4982014_7 Protein of unknown function (DUF962) - - - 0.0000000000000000000000000000000000007115 141.0
BYD3_k127_4982014_8 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000002471 138.0
BYD3_k127_4982014_9 Xanthine and CO dehydrogenases maturation factor XdhC CoxF K07402 - - 0.000000000000000000000008645 104.0
BYD3_k127_5010504_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 362.0
BYD3_k127_5010504_1 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000005224 222.0
BYD3_k127_5010504_2 - - - - 0.000000000000000000000000000000000000000000000000000000000001033 221.0
BYD3_k127_5010504_3 Protein of unknown function (DUF4255) - - - 0.00000000000000000000000000000000000000000000001583 177.0
BYD3_k127_5010504_4 tail sheath protein K06907 - - 0.00000000000001089 73.0
BYD3_k127_5010504_5 - - - - 0.000002935 51.0
BYD3_k127_506557_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 7.419e-297 928.0
BYD3_k127_506557_1 Amidohydrolase family K01466 - 3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 521.0
BYD3_k127_506557_10 Transthyretin K07127 - 3.5.2.17 0.000000000000000000000000000000005817 131.0
BYD3_k127_506557_11 integral membrane protein - - - 0.0000000000262 73.0
BYD3_k127_506557_12 iron ion homeostasis - - - 0.000000002841 70.0
BYD3_k127_506557_2 Belongs to the allantoicase family K01477 - 3.5.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 454.0
BYD3_k127_506557_3 xanthine dehydrogenase activity K13479 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000001228 271.0
BYD3_k127_506557_5 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006184 253.0
BYD3_k127_506557_6 WD40 repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000001803 256.0
BYD3_k127_506557_7 2 iron, 2 sulfur cluster binding K03518,K07302 - 1.2.5.3,1.3.99.16 0.000000000000000000000000000000000000000000000000000000000002881 211.0
BYD3_k127_506557_8 Belongs to the allantoicase family K01477 - 3.5.3.4 0.0000000000000000000000000000000000000000000006197 171.0
BYD3_k127_506557_9 abc-type fe3 -hydroxamate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000000007715 160.0
BYD3_k127_506702_0 Multicopper oxidase - - - 0.0 1736.0
BYD3_k127_506702_1 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169,K03737 - 1.2.7.1 0.0 1708.0
BYD3_k127_506702_10 SPTR Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07005 - - 0.0000000000000000001011 94.0
BYD3_k127_506702_11 AMP binding - - - 0.00000000000000001082 94.0
BYD3_k127_506702_12 Universal stress protein family - - - 0.000000000002609 78.0
BYD3_k127_506702_2 CHASE3 domain - - - 2.719e-241 763.0
BYD3_k127_506702_3 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 625.0
BYD3_k127_506702_4 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 451.0
BYD3_k127_506702_5 PFAM Response regulator receiver domain K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008481 452.0
BYD3_k127_506702_6 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 407.0
BYD3_k127_506702_7 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000005717 221.0
BYD3_k127_506702_9 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.0000000000000000000000005106 111.0
BYD3_k127_5073803_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005106 573.0
BYD3_k127_5073803_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003277 499.0
BYD3_k127_5073803_10 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000001284 256.0
BYD3_k127_5073803_11 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000088 236.0
BYD3_k127_5073803_12 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000001471 220.0
BYD3_k127_5073803_13 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000002103 201.0
BYD3_k127_5073803_14 diguanylate cyclase - - - 0.000000000000000000000000000000000005195 149.0
BYD3_k127_5073803_15 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000003205 142.0
BYD3_k127_5073803_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000677 487.0
BYD3_k127_5073803_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004925 457.0
BYD3_k127_5073803_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 351.0
BYD3_k127_5073803_5 Inositol monophosphatase family K01092,K05602 - 3.1.3.15,3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005921 310.0
BYD3_k127_5073803_6 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 308.0
BYD3_k127_5073803_7 oxidoreductase activity, acting on CH-OH group of donors K13237 - 1.3.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 295.0
BYD3_k127_5073803_8 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000011 278.0
BYD3_k127_5073803_9 belongs to the PRA-CH family K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000007691 259.0
BYD3_k127_5116458_0 ABC1 family K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 559.0
BYD3_k127_5116458_1 transporter K03319 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 449.0
BYD3_k127_5116458_10 Bacterial regulatory protein, Fis family K15012 - - 0.0002984 50.0
BYD3_k127_5116458_2 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008294 419.0
BYD3_k127_5116458_3 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 329.0
BYD3_k127_5116458_4 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001978 298.0
BYD3_k127_5116458_5 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000005016 267.0
BYD3_k127_5116458_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000008098 204.0
BYD3_k127_5116458_7 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.0000000000000000000000000000000000000000000000000000004313 199.0
BYD3_k127_5116458_8 EVE domain - - - 0.0000000000000000000000000000000000000000000000007483 178.0
BYD3_k127_5116458_9 Protein of unknown function (DUF3052) - - - 0.000000000000000000000000000000002176 141.0
BYD3_k127_5158166_0 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000041 289.0
BYD3_k127_5158166_1 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001756 302.0
BYD3_k127_5158166_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000515 267.0
BYD3_k127_5158166_3 MOFRL family K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000004894 244.0
BYD3_k127_5158166_4 Cysteine dioxygenase type I K00456 - 1.13.11.20 0.00000000000000000000002857 106.0
BYD3_k127_5158166_5 outer membrane autotransporter barrel domain protein - - - 0.0005787 45.0
BYD3_k127_5158583_0 Tricorn protease homolog K08676 - - 8.026e-201 635.0
BYD3_k127_5158583_1 Major Facilitator Superfamily K08151 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008988 299.0
BYD3_k127_5158583_2 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000004154 191.0
BYD3_k127_5158583_3 SMART PDZ DHR GLGF domain protein - - - 0.0000000000000000000000000000004305 128.0
BYD3_k127_5158583_4 triphosphatase activity - - - 0.000000000000000000000001604 110.0
BYD3_k127_5158583_5 Protein of unknown function (DUF3298) - - - 0.000000000000000000000003197 115.0
BYD3_k127_5158583_6 DoxX K15977 - - 0.00000000000000000000002943 104.0
BYD3_k127_51638_0 protoporphyrinogen oxidase activity K00231,K14266 - 1.14.19.9,1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 451.0
BYD3_k127_51638_1 Spermine/spermidine synthase domain - - - 0.00000000000000000004452 96.0
BYD3_k127_51638_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0046148,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000009679 57.0
BYD3_k127_5164683_0 Tricorn protease homolog - - - 0.0 1333.0
BYD3_k127_5164683_1 Putative cyclase K07130 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 301.0
BYD3_k127_5164683_2 Mammalian cell entry related domain protein K02067 - - 0.000000004561 58.0
BYD3_k127_5164683_3 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00003916 48.0
BYD3_k127_5190151_0 lyase activity - - - 0.0 1290.0
BYD3_k127_5190151_1 - - - - 7.065e-321 1034.0
BYD3_k127_5190151_2 - K00712 - 2.4.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 477.0
BYD3_k127_5190151_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008003 400.0
BYD3_k127_5190151_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006807 315.0
BYD3_k127_5190151_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001873 285.0
BYD3_k127_5190151_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006103 254.0
BYD3_k127_5190151_7 PFAM Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000005963 180.0
BYD3_k127_5190151_8 Histidine kinase - - - 0.0000000000000000000000000000000003849 147.0
BYD3_k127_5190151_9 Lamin Tail Domain - - - 0.000000000000000004156 96.0
BYD3_k127_5201573_0 TIGRFAM iron-sulfur cluster binding protein K18929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 465.0
BYD3_k127_5201573_1 Periplasmic binding proteins and sugar binding domain of LacI family K10439,K10552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 447.0
BYD3_k127_5201573_2 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K11177 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 359.0
BYD3_k127_5201573_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01707 - 4.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 316.0
BYD3_k127_5201573_4 Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007234 271.0
BYD3_k127_5201573_5 2Fe-2S -binding K13483 - - 0.00000000000000000000000000000000000000000000000000000004367 203.0
BYD3_k127_5201573_6 Pfam:DUF162 K00782 - - 0.00000000000000000005823 98.0
BYD3_k127_5208218_0 Alpha-2-Macroglobulin K06894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 535.0
BYD3_k127_5208218_1 Protein of unknown function (DUF2891) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 479.0
BYD3_k127_5208218_10 - K14949 - 2.7.11.1 0.0001952 50.0
BYD3_k127_5208218_2 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 435.0
BYD3_k127_5208218_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003294 252.0
BYD3_k127_5208218_4 penicillin binding - - - 0.0000000000000000000000000000000000000000000000000000002965 214.0
BYD3_k127_5208218_5 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000003487 178.0
BYD3_k127_5208218_6 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000001624 177.0
BYD3_k127_5208218_7 extracellular polysaccharide biosynthetic process K13582 - - 0.0000000000000000000004052 108.0
BYD3_k127_5208218_8 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.000000000000000000003181 99.0
BYD3_k127_5214594_0 glutamine synthetase K01915 GO:0001968,GO:0003674,GO:0003824,GO:0004356,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009405,GO:0009605,GO:0009607,GO:0009893,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016020,GO:0016053,GO:0016211,GO:0016874,GO:0016879,GO:0016880,GO:0019222,GO:0019752,GO:0019899,GO:0020012,GO:0030162,GO:0030312,GO:0030682,GO:0031323,GO:0031325,GO:0032268,GO:0032270,GO:0035375,GO:0040007,GO:0043207,GO:0043436,GO:0044044,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045862,GO:0046394,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0060255,GO:0065007,GO:0070613,GO:0071704,GO:0071944,GO:0075136,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1903317,GO:1903319 6.3.1.2 4.964e-206 650.0
BYD3_k127_5214594_1 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006273 435.0
BYD3_k127_5214594_2 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 350.0
BYD3_k127_5214594_3 PFAM GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006685 359.0
BYD3_k127_5214594_4 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 340.0
BYD3_k127_5214594_5 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 311.0
BYD3_k127_5214594_6 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K11072 - 3.6.3.30,3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 302.0
BYD3_k127_5214594_7 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.00000000000000005561 83.0
BYD3_k127_5214594_8 - - - - 0.0002962 49.0
BYD3_k127_5245868_0 Alpha-2-Macroglobulin K06894 - - 1.759e-302 985.0
BYD3_k127_5245868_1 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000000000000000357 239.0
BYD3_k127_5245868_2 Protein of unknown function (DUF1175) K09934 - - 0.000000000000000000000000000000000000000000000003298 184.0
BYD3_k127_5245868_3 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.00000000000000000000002301 117.0
BYD3_k127_5245868_4 von Willebrand factor, type A - - - 0.000000000000986 79.0
BYD3_k127_5245868_5 - K05826 - - 0.000000002332 61.0
BYD3_k127_5245868_6 domain protein K14475 - - 0.00000445 56.0
BYD3_k127_5249712_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702,K08999 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009380,GO:0009628,GO:0032991,GO:0042802,GO:0044424,GO:0044464,GO:0050896,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 3.634e-267 837.0
BYD3_k127_5249712_1 PFAM FAD linked oxidase domain protein K00102 - 1.1.2.4 0.000134 47.0
BYD3_k127_5264469_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006773 472.0
BYD3_k127_5264469_1 Participates in transcription elongation, termination and antitermination - - - 0.000000000000000000000000000000000000000000000000000005678 204.0
BYD3_k127_5264469_2 beta-propeller repeat - - - 0.00000000000000000000000000000006457 133.0
BYD3_k127_5284911_0 two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 530.0
BYD3_k127_5284911_1 N,N-dimethylaniline monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 450.0
BYD3_k127_5284911_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 379.0
BYD3_k127_5284911_3 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000006559 112.0
BYD3_k127_5328838_0 Belongs to the aldehyde dehydrogenase family K00141,K22187 - 1.2.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 586.0
BYD3_k127_5328838_1 Winged helix DNA-binding domain K09927 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 524.0
BYD3_k127_5328838_10 glyoxalase III activity - - - 0.00000000000000000000000000164 118.0
BYD3_k127_5328838_11 DNA-binding transcription factor activity - - - 0.00000000000000000000006955 104.0
BYD3_k127_5328838_12 Protein of unknown function (DUF2905) - - - 0.00000000000000000004646 91.0
BYD3_k127_5328838_14 YtkA-like - - - 0.00000000000000009103 85.0
BYD3_k127_5328838_16 - - - - 0.0000000005892 70.0
BYD3_k127_5328838_17 Putative modulator of DNA gyrase - - - 0.0000004394 53.0
BYD3_k127_5328838_18 - - - - 0.00004738 55.0
BYD3_k127_5328838_2 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003176 498.0
BYD3_k127_5328838_3 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005155 480.0
BYD3_k127_5328838_4 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 460.0
BYD3_k127_5328838_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000005933 224.0
BYD3_k127_5328838_6 Protein of unknown function (DUF3179) - - - 0.0000000000000000000000000000000000000000000000000000000004727 209.0
BYD3_k127_5328838_7 GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000003136 193.0
BYD3_k127_5328838_8 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000002139 145.0
BYD3_k127_5328838_9 PFAM peptidase M15B and M15C DD-carboxypeptidase VanY endolysin - - - 0.000000000000000000000000000005634 130.0
BYD3_k127_5378086_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008634 478.0
BYD3_k127_5378086_1 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 462.0
BYD3_k127_5378086_10 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009557 278.0
BYD3_k127_5378086_11 FabA-like domain K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000002528 177.0
BYD3_k127_5378086_12 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.00000000000000000000000000000001882 129.0
BYD3_k127_5378086_13 TPM domain K06872 - - 0.000000002213 72.0
BYD3_k127_5378086_14 Outer membrane protein (OmpH-like) K06142 - - 0.00001371 55.0
BYD3_k127_5378086_15 Outer membrane protein (OmpH-like) K06142 - - 0.00003632 53.0
BYD3_k127_5378086_2 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 441.0
BYD3_k127_5378086_3 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 377.0
BYD3_k127_5378086_4 Belongs to the ClpA ClpB family K03696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 338.0
BYD3_k127_5378086_5 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 350.0
BYD3_k127_5378086_6 PFAM Peptidase M16 inactive domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 317.0
BYD3_k127_5378086_7 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 302.0
BYD3_k127_5378086_8 Protein of unknown function (DUF1009) K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007708 307.0
BYD3_k127_5378086_9 Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 311.0
BYD3_k127_5544368_0 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 579.0
BYD3_k127_5544368_1 Male sterility protein K01710,K01784,K12450 - 4.2.1.46,4.2.1.76,5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006895 518.0
BYD3_k127_5544368_10 WbqC-like protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001908 280.0
BYD3_k127_5544368_11 ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003313 274.0
BYD3_k127_5544368_12 Cytidylyltransferase K00983 - 2.7.7.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000003716 262.0
BYD3_k127_5544368_13 Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001419 258.0
BYD3_k127_5544368_14 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008574 254.0
BYD3_k127_5544368_15 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004457 246.0
BYD3_k127_5544368_16 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000000000000000000002618 188.0
BYD3_k127_5544368_17 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000016 177.0
BYD3_k127_5544368_18 WbqC-like protein family - - - 0.00000000000000000000000000000000000000000001184 171.0
BYD3_k127_5544368_2 DegT/DnrJ/EryC1/StrS aminotransferase family K02805,K07806 - 2.6.1.59,2.6.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 515.0
BYD3_k127_5544368_20 Methyltransferase type 11 Methyltransferase type 12 - - - 0.00000000000000000000000000000000000000003646 163.0
BYD3_k127_5544368_21 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K01179,K01637 - 3.2.1.4,4.1.3.1 0.0000000000000000000000000000000006751 135.0
BYD3_k127_5544368_22 Acetyltransferase (GNAT) domain K00657 - 2.3.1.57 0.00000000000000000000000000000001808 134.0
BYD3_k127_5544368_23 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000879 119.0
BYD3_k127_5544368_24 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.0000000000000000000006456 106.0
BYD3_k127_5544368_25 Oxidoreductase family, NAD-binding Rossmann fold K03810 - - 0.000000000000000000003131 105.0
BYD3_k127_5544368_26 Glycosyl transferase 4-like - - - 0.000000000000000006199 96.0
BYD3_k127_5544368_27 - - - - 0.00000000000000003157 93.0
BYD3_k127_5544368_28 transferase activity, transferring glycosyl groups K19424 - - 0.00000000000000009216 93.0
BYD3_k127_5544368_29 UDP-N-acetylglucosamine 2-epimerase K08068,K18429 - 3.2.1.183,3.2.1.184 0.000000303 57.0
BYD3_k127_5544368_3 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007457 425.0
BYD3_k127_5544368_4 NeuB family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 402.0
BYD3_k127_5544368_5 ATPases associated with a variety of cellular activities K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004792 381.0
BYD3_k127_5544368_6 Asparagine synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 361.0
BYD3_k127_5544368_7 PFAM ABC transporter related K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 345.0
BYD3_k127_5544368_8 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 319.0
BYD3_k127_5544368_9 COG1682 ABC-type polysaccharide polyol phosphate export systems, permease component K09690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 307.0
BYD3_k127_5553963_0 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 485.0
BYD3_k127_5553963_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850,K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 409.0
BYD3_k127_5553963_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000008513 261.0
BYD3_k127_5553963_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000025 184.0
BYD3_k127_5553963_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000001298 164.0
BYD3_k127_5553963_5 - - - - 0.0000007219 55.0
BYD3_k127_5553963_6 - - - - 0.00007574 48.0
BYD3_k127_5557608_0 asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009569 452.0
BYD3_k127_5557608_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005037 356.0
BYD3_k127_5557608_2 Belongs to the ATCase OTCase family K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0043857,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 339.0
BYD3_k127_5557608_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000002024 260.0
BYD3_k127_5557608_4 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000001929 234.0
BYD3_k127_5557608_5 Pfam Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000003732 226.0
BYD3_k127_5557608_6 COG0515 Serine threonine protein K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000005425 219.0
BYD3_k127_5557608_7 DNA polymerase K02347 - - 0.000000000000000000000000000485 118.0
BYD3_k127_5557608_9 - - - - 0.00000000000000000000000001473 116.0
BYD3_k127_5598885_0 cellulose binding - - - 0.0 1298.0
BYD3_k127_5598885_1 Domain of unknown function (DUF5117) - - - 3.34e-303 949.0
BYD3_k127_5598885_10 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 376.0
BYD3_k127_5598885_11 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009667 369.0
BYD3_k127_5598885_12 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 355.0
BYD3_k127_5598885_13 CHASE3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 362.0
BYD3_k127_5598885_14 heat shock protein binding K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004822 333.0
BYD3_k127_5598885_15 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005974 334.0
BYD3_k127_5598885_16 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004665 276.0
BYD3_k127_5598885_17 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000001059 258.0
BYD3_k127_5598885_18 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002435 274.0
BYD3_k127_5598885_19 Arsenical pump-driving ATPase K01551 - 3.6.3.16 0.000000000000000000000000000000000000000000000000000000003257 212.0
BYD3_k127_5598885_2 efflux transmembrane transporter activity K02004 - - 5.639e-223 717.0
BYD3_k127_5598885_20 TIGRFAM arsenite-activated ATPase ArsA K01551,K19171 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000003806 208.0
BYD3_k127_5598885_21 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000005563 139.0
BYD3_k127_5598885_22 Gas vesicle synthesis protein GvpL/GvpF - - - 0.0000000000000000000000000000000445 136.0
BYD3_k127_5598885_23 Transcriptional regulator - - - 0.0000000000000000000000000000002968 130.0
BYD3_k127_5598885_24 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure - - - 0.000000000000000000000000000000555 124.0
BYD3_k127_5598885_25 Gas vesicle protein K - - - 0.00000000000000000000000000006043 119.0
BYD3_k127_5598885_26 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth - - - 0.00000000000000000000000001474 113.0
BYD3_k127_5598885_27 Gas vesicle synthesis protein GvpL/GvpF - - - 0.000000000000000000002294 104.0
BYD3_k127_5598885_29 - - - - 0.000000000001275 68.0
BYD3_k127_5598885_3 efflux transmembrane transporter activity - - - 5.638e-204 661.0
BYD3_k127_5598885_30 gas vesicle protein - - - 0.0000000007156 62.0
BYD3_k127_5598885_4 efflux transmembrane transporter activity K02004 - - 2.512e-202 656.0
BYD3_k127_5598885_5 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 583.0
BYD3_k127_5598885_6 PFAM FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008709 547.0
BYD3_k127_5598885_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 475.0
BYD3_k127_5598885_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 438.0
BYD3_k127_5598885_9 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 387.0
BYD3_k127_5654271_0 phage tail tape measure protein - - - 7.684e-251 805.0
BYD3_k127_5654271_1 beta-galactosidase activity K17624 - 3.2.1.97 0.00000976 59.0
BYD3_k127_5654271_2 O-methyltransferase K00588,K16028,K21189 - 2.1.1.104 0.0002709 54.0
BYD3_k127_5705266_0 iron-nicotianamine transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009691 483.0
BYD3_k127_5705266_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 396.0
BYD3_k127_5705266_2 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 360.0
BYD3_k127_5705266_3 YHS domain K06966 - 3.2.2.10 0.000000000000000000000000000000000001447 145.0
BYD3_k127_5705266_4 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000001776 137.0
BYD3_k127_57661_0 PFAM Pyridoxal-dependent decarboxylase conserved domain K01580,K01593,K13745 - 4.1.1.105,4.1.1.15,4.1.1.28,4.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007957 586.0
BYD3_k127_57661_1 Carboxymethylenebutenolidase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 465.0
BYD3_k127_57661_10 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000009581 169.0
BYD3_k127_57661_11 Redoxin - - - 0.000000000000000000000000000000000003255 142.0
BYD3_k127_57661_12 Histidine kinase - - - 0.00000000000000000000000000000000002029 154.0
BYD3_k127_57661_13 Protein of unknown function (DUF962) - - - 0.0000000000000000000000000000004783 129.0
BYD3_k127_57661_14 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000000000000000552 104.0
BYD3_k127_57661_15 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000006534 92.0
BYD3_k127_57661_16 bacterial OsmY and nodulation domain K04065 - - 0.000002193 56.0
BYD3_k127_57661_2 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 464.0
BYD3_k127_57661_3 PD-(D/E)XK nuclease superfamily K16898 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 444.0
BYD3_k127_57661_4 Aminotransferase class-V K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009316 361.0
BYD3_k127_57661_5 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 343.0
BYD3_k127_57661_6 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 307.0
BYD3_k127_57661_7 amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001218 286.0
BYD3_k127_57661_8 3'(2'),5'-bisphosphate nucleotidase activity K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000001962 253.0
BYD3_k127_57661_9 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddB nuclease domain is not required for chi fragment generation K16899 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000003464 232.0
BYD3_k127_57673_0 AMP-binding enzyme C-terminal domain - - - 0.0 1227.0
BYD3_k127_57673_1 Condensation domain - - - 0.00000000000000000000000000000000000000000000000000000007858 202.0
BYD3_k127_5854449_0 TonB-dependent Receptor Plug K16090 - - 3.575e-269 850.0
BYD3_k127_5854449_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004623 476.0
BYD3_k127_5854449_2 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 394.0
BYD3_k127_5854449_3 pkhd-type hydroxylase K07336 GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0033554,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0098771 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000958 358.0
BYD3_k127_5854449_4 peptidyl-lysine modification to peptidyl-hypusine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004533 335.0
BYD3_k127_5854449_5 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 308.0
BYD3_k127_5854449_6 - - - - 0.0000000000000000000000000002489 130.0
BYD3_k127_5854449_7 von Willebrand factor, type A K07114 - - 0.0000000000000000000004297 109.0
BYD3_k127_5854449_8 Prokaryotic dksA/traR C4-type zinc finger - - - 0.00000000000000491 79.0
BYD3_k127_5854449_9 Peptidase, M16 - - - 0.00000009947 64.0
BYD3_k127_5854633_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 1.402e-309 960.0
BYD3_k127_5854633_1 TIGRFAM magnesium chelatase, H subunit K03403 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004582 527.0
BYD3_k127_5854633_10 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000002194 248.0
BYD3_k127_5854633_11 oxidoreductase activity, acting on diphenols and related substances as donors K02636,K03886 - 1.10.9.1 0.000000000000000000000000000000000000000000000000000000000000000000001112 241.0
BYD3_k127_5854633_12 oxidoreductase DsbE K02199 - - 0.000000000000000000000000000000000000000000000000000000000000000000006689 239.0
BYD3_k127_5854633_13 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000000002274 200.0
BYD3_k127_5854633_14 Cytochrome c-type biogenesis protein K02200 - - 0.000000000000000000000000000000000000000000000000000007859 201.0
BYD3_k127_5854633_15 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000000008907 148.0
BYD3_k127_5854633_16 Evidence 4 Homologs of previously reported genes of K03975 - - 0.000000000000005467 81.0
BYD3_k127_5854633_17 cell redox homeostasis K03671 - - 0.0000000000006234 72.0
BYD3_k127_5854633_18 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.00000005072 57.0
BYD3_k127_5854633_19 Tetratricopeptide repeat - - - 0.00008423 52.0
BYD3_k127_5854633_2 PFAM CobN Magnesium Chelatase K02230,K03403 - 6.6.1.1,6.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007393 531.0
BYD3_k127_5854633_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009288 464.0
BYD3_k127_5854633_4 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 434.0
BYD3_k127_5854633_5 introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX K03405 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 414.0
BYD3_k127_5854633_6 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000328 347.0
BYD3_k127_5854633_7 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006019 305.0
BYD3_k127_5854633_8 Di-haem oxidoreductase, putative peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004519 289.0
BYD3_k127_5854633_9 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005383 268.0
BYD3_k127_5875603_0 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 341.0
BYD3_k127_5875603_1 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000001793 224.0
BYD3_k127_5875603_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000001266 215.0
BYD3_k127_5883300_0 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009916 381.0
BYD3_k127_5883300_1 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 371.0
BYD3_k127_5883300_2 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000009034 163.0
BYD3_k127_5883300_3 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000004074 142.0
BYD3_k127_5883300_4 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000933 141.0
BYD3_k127_5883300_5 Belongs to the peptidase S1C family - - - 0.000000000000000000000005221 117.0
BYD3_k127_5883300_6 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.0000003392 63.0
BYD3_k127_5883300_7 Tetratricopeptide repeat-like domain - - - 0.000006779 57.0
BYD3_k127_5883300_8 Putative zinc-finger - - - 0.0003099 52.0
BYD3_k127_5883300_9 Putative zinc-finger - - - 0.0003408 51.0
BYD3_k127_58887_0 PFAM NHL repeat - - - 5.339e-202 648.0
BYD3_k127_58887_1 Ferritin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006536 290.0
BYD3_k127_58887_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000002353 154.0
BYD3_k127_58887_3 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000000000000000000000003356 162.0
BYD3_k127_58887_4 Rhomboid family K19225 - 3.4.21.105 0.00000000000000000007506 96.0
BYD3_k127_5903151_0 PFAM glycosyl transferase family 25 K07270 - - 0.0000000000000000000000000000000000000000000000002374 190.0
BYD3_k127_5903151_1 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000002093 172.0
BYD3_k127_5903151_2 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.0000000000000000000000000000000000001233 151.0
BYD3_k127_5903151_3 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.00000000000006756 78.0
BYD3_k127_5947293_0 helicase activity - - - 0.0 1017.0
BYD3_k127_5947293_1 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005418 247.0
BYD3_k127_5947293_2 Zinc-binding dehydrogenase - - - 0.00000000000008635 71.0
BYD3_k127_5947571_0 Holliday junction DNA helicase ruvB C-terminus K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 434.0
BYD3_k127_5947571_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 363.0
BYD3_k127_5947571_10 nucleotidyltransferase activity - - - 0.00000000000000000000000000000000001169 148.0
BYD3_k127_5947571_11 BMC K04027 - - 0.0000000000000000000000000000000001379 134.0
BYD3_k127_5947571_12 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.000000000000000000000001578 105.0
BYD3_k127_5947571_13 TPM domain K06872 - - 0.0000000000000000001013 100.0
BYD3_k127_5947571_14 Ethanolamine utilisation protein EutN/carboxysome K04028 - - 0.0000000000000000003272 91.0
BYD3_k127_5947571_15 TIGRFAM ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000001936 78.0
BYD3_k127_5947571_16 ribonuclease BN K07058 - - 0.000000000000452 79.0
BYD3_k127_5947571_17 Ethanolamine utilisation protein EutN/carboxysome K04028 - - 0.000000001422 62.0
BYD3_k127_5947571_18 Tetratricopeptide repeat - - - 0.000001285 59.0
BYD3_k127_5947571_2 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007155 313.0
BYD3_k127_5947571_3 Required for morphogenesis under gluconeogenic growth conditions - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000398 284.0
BYD3_k127_5947571_4 ZIP Zinc transporter K07238,K11021,K16267 - - 0.000000000000000000000000000000000000000000000000000000000005254 217.0
BYD3_k127_5947571_5 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000001443 211.0
BYD3_k127_5947571_6 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000001508 194.0
BYD3_k127_5947571_7 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000001507 182.0
BYD3_k127_5947571_8 PFAM LemA family protein K03744 - - 0.0000000000000000000000000000000000000000000116 170.0
BYD3_k127_5947571_9 PFAM Roadblock LC7 family protein - - - 0.00000000000000000000000000000000000000000001255 166.0
BYD3_k127_5953623_0 Carboxyl transferase domain - - - 8.541e-214 672.0
BYD3_k127_5953623_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007016 603.0
BYD3_k127_5953623_10 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000002079 156.0
BYD3_k127_5953623_11 response regulator K13599 - - 0.000000000000000000000000000000000000001961 158.0
BYD3_k127_5953623_12 PFAM thioesterase superfamily K07107 - - 0.00000000000000000000000000000000000006387 148.0
BYD3_k127_5953623_13 Ribosomal protein L35 K02916 - - 0.0000000000000000005342 88.0
BYD3_k127_5953623_14 Carboxyl transferase domain - - - 0.00000000000001992 75.0
BYD3_k127_5953623_15 Protein of unknown function (DUF3311) - - - 0.00000000001412 66.0
BYD3_k127_5953623_16 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000005418 56.0
BYD3_k127_5953623_2 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 480.0
BYD3_k127_5953623_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 362.0
BYD3_k127_5953623_4 PFAM O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 344.0
BYD3_k127_5953623_5 PFAM Metallophosphoesterase K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001156 285.0
BYD3_k127_5953623_6 Zn peptidase - - - 0.000000000000000000000000000000000000000000000000000000000007003 223.0
BYD3_k127_5953623_7 PFAM regulatory protein LuxR - - - 0.00000000000000000000000000000000000000000000000000000000003059 213.0
BYD3_k127_5953623_8 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000005494 205.0
BYD3_k127_5953623_9 Alternative locus ID - - - 0.000000000000000000000000000000000000000000007259 175.0
BYD3_k127_5991462_0 PFAM Uncharacterised BCR, COG1649 - - - 0.00000000000000000000000000000000000000000000000000000000000000004944 254.0
BYD3_k127_5991462_1 COG2931 RTX toxins and related Ca2 -binding - - - 0.0000000000000000000000000000000000000000000000001583 204.0
BYD3_k127_5991462_2 CHAT domain - - - 0.0000000000000000000000000000000000000001027 173.0
BYD3_k127_5991462_3 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000003648 104.0
BYD3_k127_5991462_4 Type II restriction enzyme, methylase subunits - - - 0.000000000007635 68.0
BYD3_k127_5991462_5 extracellular matrix structural constituent - - - 0.0000004516 59.0
BYD3_k127_5991462_6 NACHT domain K12800 - - 0.000007178 59.0
BYD3_k127_6002482_0 efflux transmembrane transporter activity - - - 3.552e-204 661.0
BYD3_k127_6002482_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 623.0
BYD3_k127_6002482_2 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 602.0
BYD3_k127_6002482_3 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 406.0
BYD3_k127_6003557_0 Glycosyl hydrolase family 1 K00067 - 1.1.1.133 1.621e-305 952.0
BYD3_k127_6003557_1 Belongs to the glycosyl hydrolase 2 family - - - 6.133e-254 796.0
BYD3_k127_6003557_10 Aminotransferase class-III - - - 0.000000000000000000000000000000000005651 138.0
BYD3_k127_6003557_11 Ankyrin repeat K06867 - - 0.0000000001828 72.0
BYD3_k127_6003557_12 Protein of unknown function (DUF3072) - - - 0.00000003681 56.0
BYD3_k127_6003557_13 export protein - - - 0.000004827 59.0
BYD3_k127_6003557_14 peptidyl-tyrosine sulfation - - - 0.00000843 58.0
BYD3_k127_6003557_15 - - - - 0.0008198 50.0
BYD3_k127_6003557_2 PFAM UDP-galactopyranose mutase, C-terminal K01854 - 5.4.99.9 6.5e-207 649.0
BYD3_k127_6003557_3 PFAM UDP-galactopyranose mutase, C-terminal K01854 - 5.4.99.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 514.0
BYD3_k127_6003557_4 Fungal family of unknown function (DUF1776) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 406.0
BYD3_k127_6003557_5 eRF1 domain 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007529 309.0
BYD3_k127_6003557_6 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005167 263.0
BYD3_k127_6003557_7 Uncharacterized conserved protein (COG2071) K09166 - - 0.00000000000000000000000000000000000000000000000000000000004504 213.0
BYD3_k127_6003557_8 Predicted membrane protein (DUF2231) - - - 0.000000000000000000000000000000000000000000000000000002219 196.0
BYD3_k127_6003557_9 - - - - 0.00000000000000000000000000000000000000000000000000003578 192.0
BYD3_k127_6009176_0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000786 559.0
BYD3_k127_6009176_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 469.0
BYD3_k127_6009176_2 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 462.0
BYD3_k127_6009176_3 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 390.0
BYD3_k127_6009176_4 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006767 285.0
BYD3_k127_6009176_5 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000002632 234.0
BYD3_k127_6009176_6 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000005344 237.0
BYD3_k127_6009176_7 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000001285 167.0
BYD3_k127_6009176_8 Radical SAM superfamily K22226 - - 0.000000000000000000000000000000003705 141.0
BYD3_k127_6009176_9 PFAM BNR Asp-box repeat - - - 0.0000000000002212 80.0
BYD3_k127_6010856_0 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 2.339e-244 769.0
BYD3_k127_6010856_1 RQC K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 514.0
BYD3_k127_6010856_2 amino acid peptide transporter K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 462.0
BYD3_k127_6010856_3 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 423.0
BYD3_k127_6010856_4 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 341.0
BYD3_k127_6010856_5 Lamin Tail Domain K07004 - - 0.0000000000000000000000000000000000000000000000517 193.0
BYD3_k127_6010856_6 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000003408 161.0
BYD3_k127_6028546_0 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 408.0
BYD3_k127_6028546_1 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000003153 186.0
BYD3_k127_6028546_2 glyoxalase III activity - - - 0.0000000000000000000000001425 109.0
BYD3_k127_6028546_3 PFAM AhpC TSA family K03386 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0020012,GO:0030682,GO:0042221,GO:0043207,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0051920,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0070887,GO:0075136,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.00000003208 59.0
BYD3_k127_6028546_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0009263 49.0
BYD3_k127_6039694_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 603.0
BYD3_k127_6039694_1 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000004229 208.0
BYD3_k127_6039694_2 - - - - 0.0000000000000000000000000000000000000000004256 182.0
BYD3_k127_6039694_3 response regulator - - - 0.0000000000000000000000000000000000000016 156.0
BYD3_k127_6039694_4 PQQ enzyme repeat - - - 0.000000000000000000000007533 118.0
BYD3_k127_6039694_5 competence protein COMEC - - - 0.0000000000000000000009599 100.0
BYD3_k127_6039694_6 SCO1/SenC - - - 0.00000000000000222 77.0
BYD3_k127_6039694_7 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.0002093 49.0
BYD3_k127_6045832_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1345.0
BYD3_k127_6045832_1 Protein kinase domain K12132 - 2.7.11.1 6.208e-217 705.0
BYD3_k127_6045832_2 Tricorn protease PDZ domain K08676 - - 3.925e-207 657.0
BYD3_k127_6045832_3 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 577.0
BYD3_k127_6045832_4 Domain of unknown function (DUF5122) beta-propeller K14274,K21449 - - 0.00000000000000000000000000000000000000000000000000000000000003578 239.0
BYD3_k127_6045832_5 PFAM Uncharacterised BCR, COG1649 - - - 0.0000000000000000000000000000000000000000000000000000000003625 226.0
BYD3_k127_6045832_6 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000004684 195.0
BYD3_k127_6045832_7 Chaperone - - - 0.000000000008427 71.0
BYD3_k127_6045832_8 - - - - 0.000000005835 61.0
BYD3_k127_6094651_0 Carboxypeptidase regulatory-like domain - - - 2.689e-241 785.0
BYD3_k127_6094651_1 Gamma-glutamyltranspeptidase K00681 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005852 556.0
BYD3_k127_6094651_2 4Fe-4S binding domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008469 343.0
BYD3_k127_6094651_3 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000005912 250.0
BYD3_k127_6094651_4 PFAM FAD binding domain K11472 - - 0.00000000000000000000000000000000000000000000000001622 190.0
BYD3_k127_6182980_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0 2502.0
BYD3_k127_6182980_1 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006279 511.0
BYD3_k127_6182980_10 HNH endonuclease - - - 0.00000000000000000000000002068 119.0
BYD3_k127_6182980_11 PEGA domain - - - 0.0001746 54.0
BYD3_k127_6182980_2 ABC transporter related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008528 385.0
BYD3_k127_6182980_3 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 302.0
BYD3_k127_6182980_4 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000179 287.0
BYD3_k127_6182980_5 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000002549 252.0
BYD3_k127_6182980_6 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000004071 237.0
BYD3_k127_6182980_7 Esterase of the alpha-beta hydrolase superfamily - - - 0.0000000000000000000000000000000000000000000000000008001 213.0
BYD3_k127_6182980_8 metallocarboxypeptidase activity K14054 GO:0000270,GO:0003674,GO:0003824,GO:0004040,GO:0004180,GO:0004181,GO:0005488,GO:0006022,GO:0006026,GO:0006027,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0009050,GO:0009056,GO:0009057,GO:0009253,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019538,GO:0030203,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0046872,GO:0046914,GO:0061473,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000002696 186.0
BYD3_k127_6182980_9 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000006454 178.0
BYD3_k127_6196648_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 609.0
BYD3_k127_6196648_1 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 543.0
BYD3_k127_6196648_2 Domain of unknown function (DUF4178) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 509.0
BYD3_k127_6196648_3 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 402.0
BYD3_k127_6196648_4 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000007367 264.0
BYD3_k127_6196648_5 Beta-lactamase - - - 0.0000000000000000000000000000000000002487 158.0
BYD3_k127_6196648_6 S-adenosylmethionine decarboxylase K01611 - 4.1.1.50 0.000000000000000000000000000001307 124.0
BYD3_k127_6196648_7 Transglycosylase associated protein - - - 0.00000000000000000000653 94.0
BYD3_k127_6196648_8 Domain of Unknown Function (DUF350) - - - 0.000000000000007134 79.0
BYD3_k127_6196648_9 FAD dependent oxidoreductase - - - 0.0000000005323 64.0
BYD3_k127_6200422_0 DNA polymerase beta thumb K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 529.0
BYD3_k127_6200422_1 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 475.0
BYD3_k127_6200422_2 Monooxygenase fad-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 455.0
BYD3_k127_6200422_3 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 445.0
BYD3_k127_6200422_4 - - - - 0.00000000000000000000000000000000000000000000000000000000007843 212.0
BYD3_k127_6200422_5 Acyl-CoA reductase (LuxC) K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.00000000000000000000000000000000000000000000000000005016 189.0
BYD3_k127_6200422_6 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.00000000000000000000000000000000000000000000000001663 184.0
BYD3_k127_6200422_7 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000123 113.0
BYD3_k127_6200422_8 acetyltransferase - - - 0.00000000000002307 75.0
BYD3_k127_6202901_0 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 5.45e-231 726.0
BYD3_k127_6202901_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000852 593.0
BYD3_k127_6202901_10 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000004296 129.0
BYD3_k127_6202901_11 Glycosyl transferase 4-like - - - 0.000000000000000000000000005479 114.0
BYD3_k127_6202901_2 Polysaccharide biosynthesis protein K17947 - 5.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 426.0
BYD3_k127_6202901_3 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000627 388.0
BYD3_k127_6202901_4 Pfam Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 297.0
BYD3_k127_6202901_5 dTDP-4-dehydrorhamnose 3,5-epimerase activity K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000001824 203.0
BYD3_k127_6202901_6 maltose O-acetyltransferase activity - - - 0.000000000000000000000000000000000000000000000000001927 192.0
BYD3_k127_6202901_7 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000006192 188.0
BYD3_k127_6202901_8 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000004994 171.0
BYD3_k127_6202901_9 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000004109 135.0
BYD3_k127_6207668_0 4Fe-4S dicluster domain K00184 - - 4.33e-201 647.0
BYD3_k127_6207668_1 GHMP kinases C terminal K07031 - 2.7.1.168 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001805 288.0
BYD3_k127_6207668_2 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001958 279.0
BYD3_k127_6207668_3 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000005037 220.0
BYD3_k127_6207668_4 PFAM UspA domain protein K06149 - - 0.0000000000000000000000007571 109.0
BYD3_k127_6207668_5 Membrane - GO:0000003,GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0032505,GO:0043093,GO:0044464,GO:0051301,GO:0071944 - 0.000000000000002569 85.0
BYD3_k127_6207776_0 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007067 495.0
BYD3_k127_6207776_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 307.0
BYD3_k127_6207776_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 302.0
BYD3_k127_6207776_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000002745 76.0
BYD3_k127_6207776_4 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic - - - 0.00002735 50.0
BYD3_k127_6211415_0 PFAM carbohydrate kinase K00854 - 2.7.1.17 8.056e-215 676.0
BYD3_k127_6211415_1 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 610.0
BYD3_k127_6211415_10 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000000001313 205.0
BYD3_k127_6211415_11 Enoyl-(Acyl carrier protein) reductase K00034,K03366 - 1.1.1.304,1.1.1.47,1.1.1.76 0.000000000000000000000000000000000000000000000000000005569 199.0
BYD3_k127_6211415_12 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000006988 182.0
BYD3_k127_6211415_13 - - - - 0.000000000000000000000000000000000007681 157.0
BYD3_k127_6211415_14 DinB family - - - 0.00000000000000000000007541 105.0
BYD3_k127_6211415_15 Acetyltransferase (GNAT) domain - - - 0.00000000000000000001641 96.0
BYD3_k127_6211415_16 DNA-templated transcription, initiation K03088 - - 0.000000000000000001864 92.0
BYD3_k127_6211415_17 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.000000000000001567 81.0
BYD3_k127_6211415_18 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.0000000000001244 83.0
BYD3_k127_6211415_19 Domain of unknown function (DUF4431) - - - 0.0000002232 55.0
BYD3_k127_6211415_2 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 450.0
BYD3_k127_6211415_21 COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) K05770 - - 0.0001375 50.0
BYD3_k127_6211415_22 Transposase - - - 0.0009726 42.0
BYD3_k127_6211415_3 Protein of unknown function (DUF819) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 384.0
BYD3_k127_6211415_4 Elongator protein 3, MiaB family, Radical SAM K06937 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 355.0
BYD3_k127_6211415_5 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 330.0
BYD3_k127_6211415_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 308.0
BYD3_k127_6211415_7 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 314.0
BYD3_k127_6211415_8 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003927 300.0
BYD3_k127_6251331_0 ATPases associated with a variety of cellular activities K10823,K10824 - 3.6.3.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008383 447.0
BYD3_k127_6251331_1 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 442.0
BYD3_k127_6251331_10 ABC transporter, ATP-binding protein K11085 - - 0.0000000000000000000000000000000000000000008485 173.0
BYD3_k127_6251331_11 Belongs to the ompA family - - - 0.000000000000000000000000000000000000005487 164.0
BYD3_k127_6251331_2 Belongs to the ABC transporter superfamily K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005679 420.0
BYD3_k127_6251331_3 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008013 400.0
BYD3_k127_6251331_4 'ABC-type dipeptide oligopeptide nickel transport K02034,K15582 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 350.0
BYD3_k127_6251331_5 transporter, permease K02033,K15581 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 308.0
BYD3_k127_6251331_6 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001513 269.0
BYD3_k127_6251331_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001485 255.0
BYD3_k127_6251331_8 Methyltransferase domain K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000194 215.0
BYD3_k127_6251331_9 response regulator receiver K02483,K07658 - - 0.000000000000000000000000000000000000000000000000000001215 200.0
BYD3_k127_6264395_0 Multicopper oxidase - - - 0.0 1278.0
BYD3_k127_6264395_1 dna ligase - - - 9.023e-223 696.0
BYD3_k127_6264395_10 SCO1/SenC K07152,K08976 - - 0.0000000000000000000000000000000000000000004531 166.0
BYD3_k127_6264395_11 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000009523 148.0
BYD3_k127_6264395_12 Transcriptional - - - 0.0001026 48.0
BYD3_k127_6264395_13 Transposase IS200 like K07491 - - 0.0001971 53.0
BYD3_k127_6264395_2 ATP dependent DNA ligase C terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 566.0
BYD3_k127_6264395_3 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008732 564.0
BYD3_k127_6264395_4 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 446.0
BYD3_k127_6264395_5 H( )-stimulated, divalent metal cation uptake system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005429 393.0
BYD3_k127_6264395_6 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.00000000000000000000000000000000000000000000000000000000000000000000201 240.0
BYD3_k127_6264395_7 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.00000000000000000000000000000000000000000000000000000000000000000002724 240.0
BYD3_k127_6264395_8 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.00000000000000000000000000000000000000000000000000000000003035 213.0
BYD3_k127_6264395_9 SCO1/SenC K07152,K08976 - - 0.0000000000000000000000000000000000000000000000000000002379 201.0
BYD3_k127_6265739_0 TIGRFAM carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 438.0
BYD3_k127_6265739_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000002783 184.0
BYD3_k127_6265739_2 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000004539 188.0
BYD3_k127_6265739_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000009768 164.0
BYD3_k127_6265739_4 bacterial (prokaryotic) histone like domain K03530 - - 0.0000000000000000000000000000000005277 134.0
BYD3_k127_6265739_5 AI-2E family transporter - - - 0.00000000000000000000000000000009898 137.0
BYD3_k127_6277047_0 Luciferase-like monooxygenase K04091 - 1.14.14.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 346.0
BYD3_k127_6277047_1 Luciferase-like monooxygenase K04091 - 1.14.14.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 329.0
BYD3_k127_6277047_10 cell adhesion involved in biofilm formation - - - 0.0003329 49.0
BYD3_k127_6277047_2 transferase activity, transferring glycosyl groups K00713,K06338 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002532 278.0
BYD3_k127_6277047_3 beta-fructofuranosidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003475 245.0
BYD3_k127_6277047_4 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate - - - 0.00000000000000000000000000000000000000000000000000000000000000002473 241.0
BYD3_k127_6277047_5 Endoribonuclease L-PSP - - - 0.000000000000000000000000000001699 124.0
BYD3_k127_6277047_6 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000000000001483 114.0
BYD3_k127_6277047_7 Methyltransferase fkbm family - - - 0.00000000000000000006708 99.0
BYD3_k127_6277047_8 - - - - 0.00000000002381 70.0
BYD3_k127_6277047_9 Methyltransferase domain - - - 0.0000008099 59.0
BYD3_k127_6281611_0 PFAM peptidase S9 prolyl oligopeptidase active site domain protein K01322,K01354 - 3.4.21.26,3.4.21.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 602.0
BYD3_k127_6281611_1 Gluconolactonase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008696 353.0
BYD3_k127_6281611_10 ThiS family K21029,K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000006655 119.0
BYD3_k127_6281611_11 - - - - 0.0000000000000000000000000001285 129.0
BYD3_k127_6281611_12 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) K10794 - 1.21.4.1 0.0000000000000000000000001298 117.0
BYD3_k127_6281611_13 Stage II sporulation protein E - - - 0.00000000000000000002397 108.0
BYD3_k127_6281611_15 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000004918 65.0
BYD3_k127_6281611_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 336.0
BYD3_k127_6281611_3 beta-ketoacyl-acyl-carrier-protein synthase III activity K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000006881 241.0
BYD3_k127_6281611_4 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000000000000007063 204.0
BYD3_k127_6281611_5 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000003352 195.0
BYD3_k127_6281611_6 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000001209 187.0
BYD3_k127_6281611_7 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000002817 185.0
BYD3_k127_6281611_8 PFAM von Willebrand factor type A - - - 0.0000000000000000000000000000000000000000003396 172.0
BYD3_k127_6281611_9 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000001006 162.0
BYD3_k127_6282868_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 336.0
BYD3_k127_6282868_1 PFAM Mur ligase K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006567 287.0
BYD3_k127_6282868_10 FAD binding domain K09835 - 5.2.1.13 0.000000373 63.0
BYD3_k127_6282868_11 protease K07052 - - 0.0001251 53.0
BYD3_k127_6282868_2 PFAM ATP corrinoid adenosyltransferase BtuR CobO CobP K19221 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000002571 193.0
BYD3_k127_6282868_3 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.00000000000000000000000000000000000000003734 158.0
BYD3_k127_6282868_4 iron ion homeostasis - - - 0.00000000000000000002825 103.0
BYD3_k127_6282868_5 PFAM regulatory protein GntR HTH K07979 - - 0.000000000000000001413 90.0
BYD3_k127_6282868_6 oxidoreductase activity K12511 - - 0.000000000000000004224 96.0
BYD3_k127_6282868_7 isomerase K09835 - 5.2.1.13 0.0000000000000000474 94.0
BYD3_k127_6282868_8 phosphoesterase RecJ domain protein K00974,K06881 GO:0008150,GO:0040007 2.7.7.72,3.1.13.3,3.1.3.7 0.000000000002248 69.0
BYD3_k127_6282868_9 Putative glutamine amidotransferase K07114 - - 0.000000017 66.0
BYD3_k127_6301332_0 Cytochrome c - - - 2.834e-237 757.0
BYD3_k127_6301332_1 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 1.201e-198 636.0
BYD3_k127_6301332_10 heme a metabolic process K02259,K03110 - - 0.0000000000000000000000000000000000000007892 160.0
BYD3_k127_6301332_11 SCO1/SenC K07152,K08976 - - 0.0000000000000000000000000000000000000404 147.0
BYD3_k127_6301332_12 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000007052 140.0
BYD3_k127_6301332_13 oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000001347 112.0
BYD3_k127_6301332_16 Heat induced stress protein YflT - - - 0.000000000144 71.0
BYD3_k127_6301332_2 metallocarboxypeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006687 565.0
BYD3_k127_6301332_3 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 566.0
BYD3_k127_6301332_4 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009372 299.0
BYD3_k127_6301332_5 PFAM cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000248 261.0
BYD3_k127_6301332_6 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000004128 229.0
BYD3_k127_6301332_7 deoxyhypusine monooxygenase activity K00627,K02160,K07402 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000001259 207.0
BYD3_k127_6301332_8 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000001294 199.0
BYD3_k127_6301332_9 4Fe-4S binding domain K00395,K02572,K03616 - 1.8.99.2 0.000000000000000000000000000000000000000000000000005612 183.0
BYD3_k127_6506072_0 Purple acid Phosphatase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 587.0
BYD3_k127_6506072_1 PFAM Fibronectin type III domain - - - 0.000000000000000000000000000000000000000000000000000000000000002002 246.0
BYD3_k127_6506072_2 cell shape determining protein MreB K03569 - - 0.0000000000000000000000000000000478 126.0
BYD3_k127_6506072_3 Tetratricopeptide repeat - - - 0.000000000000362 80.0
BYD3_k127_6508799_0 efflux transmembrane transporter activity K02004 - - 1.613e-201 654.0
BYD3_k127_6508799_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000001473 174.0
BYD3_k127_6508799_2 MacB-like periplasmic core domain - - - 0.00000000003867 63.0
BYD3_k127_6510868_0 radical SAM domain protein - - - 4.532e-293 908.0
BYD3_k127_6510868_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.535e-198 640.0
BYD3_k127_6510868_10 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 311.0
BYD3_k127_6510868_11 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 301.0
BYD3_k127_6510868_12 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 302.0
BYD3_k127_6510868_13 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000005703 270.0
BYD3_k127_6510868_14 Hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004 257.0
BYD3_k127_6510868_15 GTP cyclohydrolase I K00950,K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006139,GO:0006575,GO:0006725,GO:0006729,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008616,GO:0009058,GO:0009108,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0019752,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034404,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0042455,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901657,GO:1901659 2.7.6.3,3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000002928 244.0
BYD3_k127_6510868_16 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000003191 233.0
BYD3_k127_6510868_17 Pfam:DUF2305 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001385 258.0
BYD3_k127_6510868_18 tail specific protease K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000008081 241.0
BYD3_k127_6510868_19 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001318 228.0
BYD3_k127_6510868_2 class II (D K K01893 - 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005776 611.0
BYD3_k127_6510868_20 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000008676 228.0
BYD3_k127_6510868_21 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000001256 202.0
BYD3_k127_6510868_22 Nucleotidyl transferase K00966,K16881 - 2.7.7.13,5.4.2.8 0.000000000000000000000000000000000000000000000000005434 193.0
BYD3_k127_6510868_23 - - - - 0.000000000000000000000000000000000000000000000002878 178.0
BYD3_k127_6510868_24 oxidation-reduction process K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000007037 167.0
BYD3_k127_6510868_25 DinB superfamily - - - 0.0000000000000000000000000000000000000000001829 164.0
BYD3_k127_6510868_26 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000000000002441 154.0
BYD3_k127_6510868_27 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.00000000000000000000000000000000002087 148.0
BYD3_k127_6510868_28 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000000001666 138.0
BYD3_k127_6510868_29 peptidase inhibitor activity - - - 0.000000000000000000001132 106.0
BYD3_k127_6510868_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004753 618.0
BYD3_k127_6510868_30 Phosphoglycerate mutase family - - - 0.000000000000000000002527 103.0
BYD3_k127_6510868_31 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000002754 97.0
BYD3_k127_6510868_32 Response regulator, receiver - - - 0.00000000000000001051 87.0
BYD3_k127_6510868_34 gag-polyprotein putative aspartyl protease - - - 0.0000003129 61.0
BYD3_k127_6510868_35 Endonuclease/Exonuclease/phosphatase family - - - 0.00011 53.0
BYD3_k127_6510868_4 tetratricopeptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 528.0
BYD3_k127_6510868_5 NeuB family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006785 457.0
BYD3_k127_6510868_6 D-ala D-ala ligase N-terminus K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007904 387.0
BYD3_k127_6510868_7 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 379.0
BYD3_k127_6510868_8 Arginase family K01476 - 3.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 340.0
BYD3_k127_6510868_9 PFAM glycoside hydrolase family 3 domain protein K05349 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 312.0
BYD3_k127_6515771_0 Urocanase Rossmann-like domain K01712 - 4.2.1.49 8.445e-275 855.0
BYD3_k127_6515771_1 Aromatic amino acid lyase K01745 - 4.3.1.3 4.221e-197 626.0
BYD3_k127_6515771_2 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000003224 263.0
BYD3_k127_6515771_3 Predicted integral membrane protein (DUF2270) - - - 0.0000000000000000000000000000000000000000000000000000000000000000125 239.0
BYD3_k127_6515771_4 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000001426 167.0
BYD3_k127_6515771_6 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000002164 114.0
BYD3_k127_6515771_7 Transcription factor zinc-finger K09981 - - 0.00000000000004677 75.0
BYD3_k127_6528059_0 D-alanine [D-alanyl carrier protein] ligase activity - - - 0.0 1183.0
BYD3_k127_6528059_1 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 1.624e-217 690.0
BYD3_k127_6528059_2 PFAM Lantibiotic dehydratase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 563.0
BYD3_k127_6528059_3 Non-ribosomal peptide synthetase modules and related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 414.0
BYD3_k127_6528059_5 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000002203 57.0
BYD3_k127_6530050_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 460.0
BYD3_k127_6530050_1 Response receiver-modulated cyclic diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 314.0
BYD3_k127_6530050_2 Belongs to the peptidase S8 family K14647 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000183 289.0
BYD3_k127_6530050_3 PFAM KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.000000000000000000000000000000000000000000000000000000000000000000000001312 251.0
BYD3_k127_6530050_4 G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000006522 211.0
BYD3_k127_6530050_5 enzyme involved in inositol metabolism K03337 - 5.3.1.30 0.0000000000000000000000000001747 119.0
BYD3_k127_6530050_6 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.00000000000000000000000004622 109.0
BYD3_k127_6530050_7 von Willebrand factor, type A - - - 0.000004589 58.0
BYD3_k127_6533066_0 Ribosomal protein S1 K02945 - - 7.097e-205 655.0
BYD3_k127_6533066_1 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007472 354.0
BYD3_k127_6533066_2 7TM receptor with intracellular HD hydrolase K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007244 345.0
BYD3_k127_6533066_3 PFAM histidine triad (HIT) protein K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000003091 181.0
BYD3_k127_6533066_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.00000000000000000000000000000002704 128.0
BYD3_k127_6533066_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000003916 83.0
BYD3_k127_653471_0 ABC transporter K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 536.0
BYD3_k127_653471_1 PFAM Glycosyl transferase, family K00756 - 2.4.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004273 422.0
BYD3_k127_653471_10 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.0000000000000000000000000000000000000000008712 161.0
BYD3_k127_653471_11 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000002153 134.0
BYD3_k127_653471_2 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009601 385.0
BYD3_k127_653471_3 PFAM Basic membrane lipoprotein K07335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 334.0
BYD3_k127_653471_4 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 329.0
BYD3_k127_653471_5 PFAM Branched-chain amino acid transport system permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000423 305.0
BYD3_k127_653471_6 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002282 288.0
BYD3_k127_653471_7 Phosphoribulokinase / Uridine kinase family K00855,K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.19,2.7.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000005702 254.0
BYD3_k127_653471_8 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000001298 176.0
BYD3_k127_653471_9 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.0000000000000000000000000000000000000000000004758 178.0
BYD3_k127_6540748_0 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008376 393.0
BYD3_k127_6540748_1 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 303.0
BYD3_k127_6540748_2 protein histidine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 308.0
BYD3_k127_6540748_3 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001076 274.0
BYD3_k127_6540748_4 Protein of unknown function (DUF3616) - - - 0.000000000000000000000000000001166 134.0
BYD3_k127_6540748_5 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.0000000000000000000000006794 115.0
BYD3_k127_6560813_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 3.565e-280 884.0
BYD3_k127_6560813_1 Peptidase dimerisation domain K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 397.0
BYD3_k127_6560813_2 Molybdopterin converting factor subunit K03635,K21142 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000007142 194.0
BYD3_k127_6560813_3 ATP-dependent protease La (LON) substrate-binding domain K01338 - 3.4.21.53 0.000000000000000000000000000000000000001488 156.0
BYD3_k127_6560813_4 - - - - 0.00000000000000000000386 106.0
BYD3_k127_6560813_5 response regulator K02481,K10941 - - 0.0000000000000000003364 93.0
BYD3_k127_6560813_6 S-adenosylhomocysteine deaminase activity K05603 - 3.5.3.13 0.00000000000000001309 85.0
BYD3_k127_658620_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005251 552.0
BYD3_k127_658620_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005405 520.0
BYD3_k127_658620_10 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 GO:0000287,GO:0003674,GO:0003824,GO:0004799,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009157,GO:0009162,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046073,GO:0046385,GO:0046483,GO:0046872,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 341.0
BYD3_k127_658620_11 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004557 321.0
BYD3_k127_658620_12 ATPases associated with a variety of cellular activities K02003,K02004 GO:0008150,GO:0009405,GO:0009605,GO:0009607,GO:0043207,GO:0044403,GO:0044419,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0075136 - 0.00000000000000000000000000000000000000000000000000000000000000000006723 237.0
BYD3_k127_658620_13 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000003039 238.0
BYD3_k127_658620_14 Lysin motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000943 233.0
BYD3_k127_658620_15 Protein of unknown function (DUF1003) - - - 0.0000000000000000000000000000000000000000000000000000000000001869 222.0
BYD3_k127_658620_16 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000001116 200.0
BYD3_k127_658620_17 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000006893 184.0
BYD3_k127_658620_18 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000007861 177.0
BYD3_k127_658620_19 Alpha/beta hydrolase family K07020 - - 0.00000000000000000000000000000000000000000000009322 176.0
BYD3_k127_658620_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003711 504.0
BYD3_k127_658620_20 OsmC-like protein K06889,K07397 - - 0.000000000000000000000000000000000000002213 151.0
BYD3_k127_658620_21 HAD-hyrolase-like K01091,K01838 - 3.1.3.18,5.4.2.6 0.000000000000000000000000000000001159 138.0
BYD3_k127_658620_22 arsenate reductase (glutaredoxin) activity K00537 - 1.20.4.1 0.0000000000000000000000000000008684 123.0
BYD3_k127_658620_23 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000004102 122.0
BYD3_k127_658620_24 regulatory protein, MerR - - - 0.0000000000000000000000002337 111.0
BYD3_k127_658620_25 TIGRFAM TonB family K03832 - - 0.00000000000003207 83.0
BYD3_k127_658620_27 - - - - 0.0001043 51.0
BYD3_k127_658620_28 COG0457 FOG TPR repeat - - - 0.0005251 48.0
BYD3_k127_658620_3 Cys/Met metabolism PLP-dependent enzyme K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 496.0
BYD3_k127_658620_4 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 487.0
BYD3_k127_658620_5 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007016 461.0
BYD3_k127_658620_6 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 431.0
BYD3_k127_658620_7 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 420.0
BYD3_k127_658620_8 DALR_2 K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 404.0
BYD3_k127_658620_9 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 368.0
BYD3_k127_6589550_0 Prolyl oligopeptidase family - - - 3.111e-197 635.0
BYD3_k127_6589550_1 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 495.0
BYD3_k127_6589550_2 beta' subunit K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000757 392.0
BYD3_k127_6589550_3 PFAM OsmC family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001144 224.0
BYD3_k127_6589550_4 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000002514 235.0
BYD3_k127_6589550_5 periplasmic or secreted lipoprotein - - - 0.000000000000000000000000000000000000000001641 171.0
BYD3_k127_6589550_6 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000000000000000006952 149.0
BYD3_k127_6598931_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1022.0
BYD3_k127_6598931_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 1.558e-311 983.0
BYD3_k127_6598931_10 response regulator K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 338.0
BYD3_k127_6598931_11 SMART ATPase, AAA type, core K05847 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 310.0
BYD3_k127_6598931_12 Histidine-specific methyltransferase, SAM-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006515 289.0
BYD3_k127_6598931_13 DEAD DEAH box helicase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002592 267.0
BYD3_k127_6598931_14 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000001165 271.0
BYD3_k127_6598931_15 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003848 271.0
BYD3_k127_6598931_16 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002661 259.0
BYD3_k127_6598931_17 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004207 246.0
BYD3_k127_6598931_18 DSHCT - - - 0.00000000000000000000000000000000000000000000000000000000000001398 238.0
BYD3_k127_6598931_19 Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000001169 239.0
BYD3_k127_6598931_2 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 1.743e-228 717.0
BYD3_k127_6598931_20 Protein tyrosine kinase K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000004371 241.0
BYD3_k127_6598931_21 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000002466 204.0
BYD3_k127_6598931_22 RNA recognition motif - - - 0.0000000000000000000000000000000007828 135.0
BYD3_k127_6598931_23 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000001274 130.0
BYD3_k127_6598931_24 nuclear chromosome segregation - - - 0.0000000000000000000000002593 121.0
BYD3_k127_6598931_25 PFAM response regulator receiver K07657 - - 0.0000000000000000000000008212 109.0
BYD3_k127_6598931_26 von Willebrand factor, type A - - - 0.0000000000000000000001174 113.0
BYD3_k127_6598931_27 Regulatory protein, FmdB - - - 0.0000000000000000004486 91.0
BYD3_k127_6598931_28 PFAM von Willebrand factor type A K07114,K12511 - - 0.00000000000001314 84.0
BYD3_k127_6598931_29 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000002302 76.0
BYD3_k127_6598931_3 imidazolonepropionase activity K00466 - 1.13.12.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006577 536.0
BYD3_k127_6598931_30 - - - - 0.00000001143 63.0
BYD3_k127_6598931_31 general stress protein - - - 0.0000001041 60.0
BYD3_k127_6598931_32 COG0457 FOG TPR repeat - - - 0.00002231 55.0
BYD3_k127_6598931_4 PFAM aminotransferase, class I K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 538.0
BYD3_k127_6598931_5 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 500.0
BYD3_k127_6598931_6 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000776 475.0
BYD3_k127_6598931_7 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006341 412.0
BYD3_k127_6598931_8 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 419.0
BYD3_k127_6598931_9 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601,K03797 - 3.1.11.6,3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003499 349.0
BYD3_k127_6613580_0 Non-ribosomal peptide synthetase modules and related - - - 2.394e-271 864.0
BYD3_k127_6613580_1 Molecular chaperone. Has ATPase activity K04079 GO:0000302,GO:0000303,GO:0000305,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0010035,GO:0016020,GO:0030312,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044464,GO:0050896,GO:0051716,GO:0070887,GO:0071450,GO:0071451,GO:0071944,GO:1901700,GO:1901701 - 9.492e-203 650.0
BYD3_k127_6613580_2 Pfam:DUF162 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 449.0
BYD3_k127_6613580_3 4-Hydroxyphenylpyruvate dioxygenase K00457,K16421 GO:0003674,GO:0003824,GO:0003868,GO:0006082,GO:0006520,GO:0006570,GO:0006572,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0051213,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.27,1.13.11.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 430.0
BYD3_k127_6613580_4 Alanine-glyoxylate amino-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004061 412.0
BYD3_k127_6613580_5 Cysteine-rich domain K18928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001782 280.0
BYD3_k127_6613580_6 thioesterase involved in non-ribosomal peptide biosynthesis K01071 - 3.1.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000004186 254.0
BYD3_k127_6613580_7 Protein of unknown function (DUF4080) K04034 - 1.21.98.3 0.000000000000000000000000000000000004486 158.0
BYD3_k127_6613580_8 Pfam:DUF162 K00782 - - 0.000000000000000000004214 104.0
BYD3_k127_6613580_9 Transcription termination factor nusG K05785 - - 0.000000000000000005689 91.0
BYD3_k127_6618409_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 419.0
BYD3_k127_6618409_1 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000004435 191.0
BYD3_k127_6618409_2 Periplasmic or secreted lipoprotein - - - 0.00000000000004632 84.0
BYD3_k127_6637676_0 phosphorylase K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000912 406.0
BYD3_k127_6637676_1 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009524 379.0
BYD3_k127_6637676_2 Leucine-rich repeat K13730 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 349.0
BYD3_k127_6637676_3 Elongation factor G, domain IV K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 321.0
BYD3_k127_6637676_4 Appr-1'-p processing enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000005969 216.0
BYD3_k127_6637676_5 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000001809 205.0
BYD3_k127_6637676_7 - - - - 0.00000000000000000000001632 109.0
BYD3_k127_6637676_8 Domain of unknown function (DUF4384) - - - 0.0000000000000001449 91.0
BYD3_k127_6652136_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009392 343.0
BYD3_k127_6652136_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 341.0
BYD3_k127_6652136_2 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000001974 119.0
BYD3_k127_6652136_3 Ribosomal L32p protein family K02911 - - 0.000000000000000000002035 94.0
BYD3_k127_6652136_4 peptidyl-tyrosine sulfation - - - 0.0000131 56.0
BYD3_k127_666714_0 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 505.0
BYD3_k127_666714_1 Polysaccharide biosynthesis protein K12454 - 5.1.3.10 0.00000000000000000000000356 112.0
BYD3_k127_666714_2 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000005367 48.0
BYD3_k127_668415_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 4.918e-216 685.0
BYD3_k127_668415_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005742 361.0
BYD3_k127_668415_10 BON domain - - - 0.00000000000000000000000000000000000000006246 162.0
BYD3_k127_668415_11 Peptidase M56 - - - 0.0000000000000000000000000000006656 134.0
BYD3_k127_668415_2 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 331.0
BYD3_k127_668415_3 Putative integral membrane protein (DUF2391) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 329.0
BYD3_k127_668415_4 PFAM cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 328.0
BYD3_k127_668415_5 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000003209 258.0
BYD3_k127_668415_6 Cytidylyltransferase K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000007366 230.0
BYD3_k127_668415_7 -acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000001716 192.0
BYD3_k127_668415_8 Histidine kinase K07683 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000002862 196.0
BYD3_k127_668415_9 TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000125 186.0
BYD3_k127_679317_0 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 315.0
BYD3_k127_679317_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006189 312.0
BYD3_k127_679317_10 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000008221 93.0
BYD3_k127_679317_11 PFAM D12 class N6 adenine-specific DNA methyltransferase K07318 - 2.1.1.72 0.000000000006861 76.0
BYD3_k127_679317_12 DnaJ (Hsp40) homolog, subfamily C , member 25 K19371 - - 0.00000004836 66.0
BYD3_k127_679317_2 peptidase M20 K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003038 280.0
BYD3_k127_679317_3 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007469 278.0
BYD3_k127_679317_4 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000001569 226.0
BYD3_k127_679317_5 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000002488 208.0
BYD3_k127_679317_6 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000001416 165.0
BYD3_k127_679317_7 PFAM Metal-dependent phosphohydrolase, HD - - - 0.00000000000000000000000000000002243 133.0
BYD3_k127_679317_8 Histidine kinase - - - 0.000000000000000000000000000002238 131.0
BYD3_k127_679317_9 Probable zinc-ribbon domain - - - 0.000000000000000000001048 98.0
BYD3_k127_6827771_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1116.0
BYD3_k127_6827771_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 301.0
BYD3_k127_6827771_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000001831 214.0
BYD3_k127_6827771_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000004476 213.0
BYD3_k127_6827771_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000002179 158.0
BYD3_k127_6827771_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000000006177 154.0
BYD3_k127_6827771_6 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000009972 83.0
BYD3_k127_6827771_7 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000003219 75.0
BYD3_k127_6827771_8 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000008049 58.0
BYD3_k127_6828528_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.236e-256 799.0
BYD3_k127_6828528_1 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006999 620.0
BYD3_k127_6828528_10 Chloramphenicol acetyltransferase K19271 - 2.3.1.28 0.0000000000000000000000000000000000000000000000479 177.0
BYD3_k127_6828528_11 homolog, subfamily A, member K09502,K09503,K09505 GO:0000003,GO:0001664,GO:0001671,GO:0001932,GO:0001933,GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0006469,GO:0006810,GO:0006928,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007276,GO:0007283,GO:0008047,GO:0008104,GO:0008134,GO:0008150,GO:0009719,GO:0009725,GO:0009755,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010563,GO:0010605,GO:0010646,GO:0010648,GO:0010941,GO:0010942,GO:0014070,GO:0015630,GO:0016020,GO:0019220,GO:0019222,GO:0019899,GO:0019904,GO:0019953,GO:0022414,GO:0023051,GO:0023052,GO:0023057,GO:0030234,GO:0030317,GO:0030518,GO:0030521,GO:0030522,GO:0030544,GO:0030957,GO:0031072,GO:0031323,GO:0031324,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031625,GO:0032268,GO:0032269,GO:0032501,GO:0032504,GO:0032781,GO:0032870,GO:0032872,GO:0032873,GO:0032879,GO:0032880,GO:0033036,GO:0033365,GO:0033554,GO:0033673,GO:0033993,GO:0034613,GO:0040011,GO:0042221,GO:0042325,GO:0042326,GO:0042769,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043086,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043401,GO:0043405,GO:0043407,GO:0043408,GO:0043409,GO:0043462,GO:0043506,GO:0043508,GO:0043549,GO:0044092,GO:0044093,GO:0044389,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045859,GO:0045936,GO:0046328,GO:0046329,GO:0048232,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048585,GO:0048609,GO:0048870,GO:0050750,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051049,GO:0051087,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051223,GO:0051234,GO:0051246,GO:0051248,GO:0051336,GO:0051338,GO:0051345,GO:0051348,GO:0051606,GO:0051641,GO:0051674,GO:0051704,GO:0051716,GO:0055131,GO:0060255,GO:0060341,GO:0060548,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0070201,GO:0070302,GO:0070303,GO:0070325,GO:0070585,GO:0070727,GO:0070887,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:0071900,GO:0071901,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0097722,GO:0098772,GO:1901998,GO:1902531,GO:1902532,GO:1903320,GO:1903321,GO:1903747,GO:1903748,GO:1903827,GO:1903828,GO:1904950,GO:1905258,GO:1905259,GO:2001233,GO:2001234,GO:2001242,GO:2001243 - 0.0000000000006173 79.0
BYD3_k127_6828528_12 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000001267 59.0
BYD3_k127_6828528_2 sequence-specific DNA binding K01697,K01738 GO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0016020,GO:0019842,GO:0030170,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0071944,GO:0097159,GO:1901363 2.5.1.47,4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005859 536.0
BYD3_k127_6828528_3 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 520.0
BYD3_k127_6828528_4 C-terminal, D2-small domain, of ClpB protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004149 458.0
BYD3_k127_6828528_5 Myo-inositol-1-phosphate synthase, GAPDH domain protein K01858 - 5.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 429.0
BYD3_k127_6828528_6 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 439.0
BYD3_k127_6828528_7 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000716 355.0
BYD3_k127_6828528_8 Ornithine cyclodeaminase/mu-crystallin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 319.0
BYD3_k127_6828528_9 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000004923 186.0
BYD3_k127_6828755_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007262 544.0
BYD3_k127_6828755_1 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 347.0
BYD3_k127_6828755_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 304.0
BYD3_k127_6828755_3 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003308 276.0
BYD3_k127_6828755_4 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000003221 255.0
BYD3_k127_6828755_5 Thrombospondin type 3 - - - 0.000000000000000000000000000000000000000001046 177.0
BYD3_k127_6830439_0 Heat shock 70 kDa protein K04043 - - 7.181e-229 723.0
BYD3_k127_6830439_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000002436 182.0
BYD3_k127_6830439_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.0000000000000000000001507 100.0
BYD3_k127_6835280_0 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 485.0
BYD3_k127_6835280_1 Belongs to the PEP-utilizing enzyme family K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004011 377.0
BYD3_k127_6835280_10 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K09774 - - 0.0000000000000000000000001602 124.0
BYD3_k127_6835280_11 - - - - 0.0000000000000003568 91.0
BYD3_k127_6835280_12 CAAX protease self-immunity K07052 - - 0.00000009772 61.0
BYD3_k127_6835280_13 - - - - 0.000008954 52.0
BYD3_k127_6835280_2 RNA polymerase sigma-54 factor K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 347.0
BYD3_k127_6835280_3 ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 311.0
BYD3_k127_6835280_4 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004965 274.0
BYD3_k127_6835280_5 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003525 270.0
BYD3_k127_6835280_6 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000007806 252.0
BYD3_k127_6835280_7 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000007331 198.0
BYD3_k127_6835280_8 PFAM PTS system fructose subfamily IIA component K02793 - 2.7.1.191 0.0000000000000000000000000000001218 130.0
BYD3_k127_6835280_9 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000000000000001906 128.0
BYD3_k127_6848562_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.608e-228 721.0
BYD3_k127_6848562_1 MacB-like periplasmic core domain - - - 2.477e-223 718.0
BYD3_k127_6848562_10 ABC transporter K10441 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 529.0
BYD3_k127_6848562_11 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 519.0
BYD3_k127_6848562_12 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 467.0
BYD3_k127_6848562_13 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 414.0
BYD3_k127_6848562_14 ABC-type sugar transport system periplasmic component K10439 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 394.0
BYD3_k127_6848562_15 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 302.0
BYD3_k127_6848562_16 Belongs to the GSP D family K02280 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002884 291.0
BYD3_k127_6848562_17 PFAM cobalamin B12-binding domain protein K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000003701 203.0
BYD3_k127_6848562_18 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.000000000000000000000000000000000000000000000000000006359 201.0
BYD3_k127_6848562_19 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000001042 198.0
BYD3_k127_6848562_2 Acyclic terpene utilisation family protein AtuA - - - 9.329e-214 672.0
BYD3_k127_6848562_20 - - - - 0.000000000000000000000000000000000000000000007306 165.0
BYD3_k127_6848562_21 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000259 153.0
BYD3_k127_6848562_22 Response regulator, receiver K02282 - - 0.00000000000000000000000000000000004457 146.0
BYD3_k127_6848562_23 YceI-like domain - - - 0.0000000000000000000000000001383 121.0
BYD3_k127_6848562_24 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000000000000000004743 121.0
BYD3_k127_6848562_25 PFAM peptidase A24A, prepilin type IV - - - 0.00000000000000001001 90.0
BYD3_k127_6848562_26 TadE-like protein - - - 0.0000000000000001236 87.0
BYD3_k127_6848562_27 TadE-like protein - - - 0.00000000004447 69.0
BYD3_k127_6848562_28 Flp Fap pilin component K02651 - - 0.0000005753 52.0
BYD3_k127_6848562_29 Flp Fap pilin component K02651 - - 0.00000174 51.0
BYD3_k127_6848562_3 MacB-like periplasmic core domain - - - 1.326e-211 683.0
BYD3_k127_6848562_30 Flp Fap pilin component K02651 - - 0.00008068 48.0
BYD3_k127_6848562_4 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000321 638.0
BYD3_k127_6848562_5 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 607.0
BYD3_k127_6848562_6 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000916 585.0
BYD3_k127_6848562_7 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 585.0
BYD3_k127_6848562_8 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009793 544.0
BYD3_k127_6848562_9 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 527.0
BYD3_k127_6851193_0 peptidase - - - 7.684e-199 638.0
BYD3_k127_6851193_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 589.0
BYD3_k127_6851193_10 competence protein COMEC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 323.0
BYD3_k127_6851193_11 Glycosyl hydrolases family 25 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 301.0
BYD3_k127_6851193_12 Oxidoreductase, molybdopterin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001706 283.0
BYD3_k127_6851193_13 dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008588 273.0
BYD3_k127_6851193_14 Enoyl-CoA hydratase K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000002545 269.0
BYD3_k127_6851193_15 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000003926 223.0
BYD3_k127_6851193_16 DSBA-like thioredoxin domain K21990 - - 0.0000000000000000000000000000000000000493 153.0
BYD3_k127_6851193_17 Domain of unknown function (DUF4870) - - - 0.0000000000000000000000001087 111.0
BYD3_k127_6851193_18 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000004361 103.0
BYD3_k127_6851193_19 transcriptional - - - 0.00000000000000000003226 95.0
BYD3_k127_6851193_2 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006545 559.0
BYD3_k127_6851193_20 Carboxypeptidase regulatory-like domain - - - 0.00000000001413 78.0
BYD3_k127_6851193_21 Vitamin K epoxide reductase - - - 0.000000003243 63.0
BYD3_k127_6851193_22 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10126 - - 0.00001349 52.0
BYD3_k127_6851193_23 Protein of unknown function (DUF4019) - - - 0.0001203 51.0
BYD3_k127_6851193_3 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003581 538.0
BYD3_k127_6851193_4 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 417.0
BYD3_k127_6851193_5 chaperone-mediated protein folding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 413.0
BYD3_k127_6851193_6 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009184 381.0
BYD3_k127_6851193_7 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000966 363.0
BYD3_k127_6851193_8 Belongs to the peptidase M16 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 358.0
BYD3_k127_6851193_9 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007825 324.0
BYD3_k127_6881102_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1254.0
BYD3_k127_6881102_1 PFAM Amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 595.0
BYD3_k127_6881102_10 recombinase XerD K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000157 266.0
BYD3_k127_6881102_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007191 270.0
BYD3_k127_6881102_12 FecR protein - - - 0.000000000000000000000000000000000000000000000000000000008511 222.0
BYD3_k127_6881102_13 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000000000000003167 201.0
BYD3_k127_6881102_14 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000005517 201.0
BYD3_k127_6881102_15 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000000003986 179.0
BYD3_k127_6881102_16 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000000000001261 150.0
BYD3_k127_6881102_17 acetyltransferase - - - 0.00000000000000000000000000000000001712 140.0
BYD3_k127_6881102_18 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000001195 132.0
BYD3_k127_6881102_19 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 0.000000000000000000000000000003601 133.0
BYD3_k127_6881102_2 PFAM D12 class N6 adenine-specific DNA methyltransferase K07318 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 533.0
BYD3_k127_6881102_20 Phosphoglycerate mutase family - - - 0.0000000000000000000000008298 111.0
BYD3_k127_6881102_21 PFAM Rhomboid family K19225 - 3.4.21.105 0.0000000000000000001982 98.0
BYD3_k127_6881102_3 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 482.0
BYD3_k127_6881102_4 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 421.0
BYD3_k127_6881102_5 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 406.0
BYD3_k127_6881102_6 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005168 391.0
BYD3_k127_6881102_7 PFAM TonB-dependent Receptor Plug - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006073 419.0
BYD3_k127_6881102_8 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 378.0
BYD3_k127_6881102_9 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008657 287.0
BYD3_k127_6888407_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006736 421.0
BYD3_k127_6888407_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 404.0
BYD3_k127_6888407_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 368.0
BYD3_k127_6888407_3 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006386 367.0
BYD3_k127_6888407_4 asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008141 347.0
BYD3_k127_6888407_5 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 320.0
BYD3_k127_6888407_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 308.0
BYD3_k127_6888407_7 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 306.0
BYD3_k127_6888407_8 lipolytic protein G-D-S-L family K19172 GO:0000271,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016020,GO:0016051,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.00000000364 68.0
BYD3_k127_689409_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 306.0
BYD3_k127_689409_1 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000112 263.0
BYD3_k127_689409_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004989 257.0
BYD3_k127_689409_3 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000001359 261.0
BYD3_k127_689409_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000003138 234.0
BYD3_k127_689409_5 nucleotide metabolic process - - - 0.000000000000000000000000000000000000000000000000000008871 198.0
BYD3_k127_689409_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000009285 72.0
BYD3_k127_689409_7 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000004018 67.0
BYD3_k127_6896314_0 efflux transmembrane transporter activity K02004 - - 1.32e-209 677.0
BYD3_k127_6896314_1 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 571.0
BYD3_k127_6896314_2 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 558.0
BYD3_k127_6896314_3 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 418.0
BYD3_k127_6896314_4 FtsX-like permease family - - - 0.0009165 42.0
BYD3_k127_6930128_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 526.0
BYD3_k127_6930128_1 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 535.0
BYD3_k127_6930128_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000002934 127.0
BYD3_k127_6930128_11 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000000000003464 123.0
BYD3_k127_6930128_12 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.00000001561 65.0
BYD3_k127_6930128_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008572 507.0
BYD3_k127_6930128_3 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 467.0
BYD3_k127_6930128_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 425.0
BYD3_k127_6930128_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 351.0
BYD3_k127_6930128_6 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001694 266.0
BYD3_k127_6930128_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000002116 214.0
BYD3_k127_6930128_8 endonuclease III K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000112 215.0
BYD3_k127_6930128_9 2 iron, 2 sulfur cluster binding K00334,K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000001211 188.0
BYD3_k127_6942123_0 Beta-lactamase superfamily domain - - - 1.22e-204 649.0
BYD3_k127_6942123_1 Succinylglutamate desuccinylase / Aspartoacylase family K05526 - 3.5.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002755 279.0
BYD3_k127_6942123_2 D-alanine [D-alanyl carrier protein] ligase activity K16131 - - 0.00000000000000000000000000000000000000000000004771 176.0
BYD3_k127_6942123_3 ligase activity - - - 0.000006437 49.0
BYD3_k127_6949842_0 Tricorn protease C1 domain K08676 - - 0.0 1327.0
BYD3_k127_6949842_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.261e-267 839.0
BYD3_k127_6949842_10 Diacylglycerol kinase - - - 0.0000000000000000000000000002614 128.0
BYD3_k127_6949842_12 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000006615 76.0
BYD3_k127_6949842_13 PFAM PspC domain K03973 - - 0.0001028 47.0
BYD3_k127_6949842_2 peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 536.0
BYD3_k127_6949842_3 PFAM Beta-eliminating lyase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003728 467.0
BYD3_k127_6949842_4 Belongs to the FGGY kinase family K00851 - 2.7.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 412.0
BYD3_k127_6949842_5 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 353.0
BYD3_k127_6949842_6 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 327.0
BYD3_k127_6949842_7 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000009766 178.0
BYD3_k127_6949842_8 acetyltransferase - - - 0.0000000000000000000000000000000000000000001335 164.0
BYD3_k127_6949842_9 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000001095 126.0
BYD3_k127_6955119_0 Prolyl oligopeptidase family - - - 1.968e-263 831.0
BYD3_k127_6955119_1 Dienelactone hydrolase family - - - 1.41e-240 762.0
BYD3_k127_6955119_10 Putative zinc-finger - - - 0.000000000000000000000000000000000000000000004123 174.0
BYD3_k127_6955119_11 KaiB K08481 - - 0.000000000000000000000000000000000000000005778 156.0
BYD3_k127_6955119_12 Peptidase M64 N-terminus - - - 0.0000000000000000000000000000000000000001513 153.0
BYD3_k127_6955119_13 Lysin motif - - - 0.0000000000000000000000000000000000000002574 156.0
BYD3_k127_6955119_14 Parallel beta-helix repeats - - - 0.000000000000000000000000000002245 126.0
BYD3_k127_6955119_15 KaiB K08481 - - 0.00000000000000000000000000159 116.0
BYD3_k127_6955119_2 Pfam:KaiC K08482 - - 1.915e-226 715.0
BYD3_k127_6955119_3 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 606.0
BYD3_k127_6955119_4 COG2133 Glucose sorbosone dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005801 443.0
BYD3_k127_6955119_5 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 408.0
BYD3_k127_6955119_6 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 393.0
BYD3_k127_6955119_7 Belongs to the aspartate glutamate racemases family K01779 - 5.1.1.13 0.00000000000000000000000000000000000000000000000000000000000007153 220.0
BYD3_k127_6955119_8 metalloendopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000003444 224.0
BYD3_k127_6955119_9 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000001449 176.0
BYD3_k127_6981035_0 Sortilin, neurotensin receptor 3, - - - 0.0 1413.0
BYD3_k127_6981035_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0040007,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0055114,GO:0071704,GO:0071944,GO:1901576 2.4.1.18 5.316e-247 778.0
BYD3_k127_6981035_10 Dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 399.0
BYD3_k127_6981035_11 Belongs to the CinA family K03742 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 402.0
BYD3_k127_6981035_12 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 399.0
BYD3_k127_6981035_13 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 324.0
BYD3_k127_6981035_14 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 297.0
BYD3_k127_6981035_15 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007917 301.0
BYD3_k127_6981035_16 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000519 289.0
BYD3_k127_6981035_17 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000001733 232.0
BYD3_k127_6981035_18 Aminotransferase, class V - - - 0.000000000000000000000000000000000000000000000000000001134 208.0
BYD3_k127_6981035_19 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000005097 190.0
BYD3_k127_6981035_2 Sodium:solute symporter family - - - 5.033e-224 711.0
BYD3_k127_6981035_20 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000005266 161.0
BYD3_k127_6981035_21 LysR substrate binding domain K21703 - - 0.0000000000000000000000000000000000000002314 162.0
BYD3_k127_6981035_22 AMP binding - - - 0.0000000000000001138 85.0
BYD3_k127_6981035_23 Peptidase family M28 - - - 0.0000000000006234 72.0
BYD3_k127_6981035_24 Regulatory protein GntR HTH K03710 - - 0.0000000184 60.0
BYD3_k127_6981035_25 energy transducer activity K03832 - - 0.00001399 57.0
BYD3_k127_6981035_26 SMART Rhodanese domain protein - - - 0.00009277 45.0
BYD3_k127_6981035_3 Prolyl oligopeptidase family - - - 6.939e-206 666.0
BYD3_k127_6981035_4 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 599.0
BYD3_k127_6981035_5 Peptidase family S58 K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 513.0
BYD3_k127_6981035_6 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 483.0
BYD3_k127_6981035_7 Belongs to the glycosyl hydrolase 57 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 469.0
BYD3_k127_6981035_8 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 449.0
BYD3_k127_6981035_9 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 421.0
BYD3_k127_6984794_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 571.0
BYD3_k127_6984794_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007841 325.0
BYD3_k127_6984794_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000003643 238.0
BYD3_k127_6984794_3 - - - - 0.0000000000000000000000000004749 125.0
BYD3_k127_6984794_4 Cellulase (glycosyl hydrolase family 5) K01179 - 3.2.1.4 0.000000000001103 82.0
BYD3_k127_6984794_5 Acetyltransferase K06976 - - 0.00000000000209 78.0
BYD3_k127_6984794_8 Fibronectin type III domain protein - - - 0.0004601 54.0
BYD3_k127_7011956_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000003718 185.0
BYD3_k127_7046813_0 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 504.0
BYD3_k127_7046813_1 O-Antigen ligase K02847 - - 0.0000000000000000000000000000000000000000002247 177.0
BYD3_k127_7046813_2 COG0457 FOG TPR repeat - - - 0.00001716 56.0
BYD3_k127_705991_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 437.0
BYD3_k127_705991_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 333.0
BYD3_k127_7073499_0 Peptidase inhibitor I9 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 539.0
BYD3_k127_7073499_1 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 371.0
BYD3_k127_7073499_10 - - - - 0.0000000007086 61.0
BYD3_k127_7073499_11 TPR Domain containing protein K12600 - - 0.00004496 56.0
BYD3_k127_7073499_2 PFAM peptidase M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000613 356.0
BYD3_k127_7073499_3 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 343.0
BYD3_k127_7073499_4 Metallo-peptidase family M12 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 334.0
BYD3_k127_7073499_5 membrane-anchored protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000002464 222.0
BYD3_k127_7073499_6 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000000000000000001821 171.0
BYD3_k127_7073499_7 TIGRFAM thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000000000000000002299 154.0
BYD3_k127_7073499_8 Uncharacterized conserved protein (DUF2278) - - - 0.000000000003714 67.0
BYD3_k127_7073499_9 - - - - 0.0000000001464 73.0
BYD3_k127_7080451_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.698e-220 705.0
BYD3_k127_7080451_1 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 529.0
BYD3_k127_7080451_10 Predicted membrane protein (DUF2085) - - - 0.0000000000000000000000000005499 121.0
BYD3_k127_7080451_11 AraC-type transcriptional regulator N-terminus K02099 - - 0.0000000000000000744 85.0
BYD3_k127_7080451_12 - - - - 0.0000000000000002523 79.0
BYD3_k127_7080451_13 - - - - 0.0000000001615 65.0
BYD3_k127_7080451_14 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00001566 56.0
BYD3_k127_7080451_2 glycyl-tRNA aminoacylation K01880 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009345,GO:0009987,GO:0010467,GO:0016070,GO:0016594,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042165,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007011 512.0
BYD3_k127_7080451_3 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 507.0
BYD3_k127_7080451_4 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006649 417.0
BYD3_k127_7080451_5 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 403.0
BYD3_k127_7080451_6 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 388.0
BYD3_k127_7080451_7 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009963 363.0
BYD3_k127_7080451_8 beta-fructofuranosidase activity - - - 0.00000000000000000000000000000000000000000000000000002538 210.0
BYD3_k127_7080451_9 DSBA oxidoreductase - - - 0.000000000000000000000000000000000000000000000002609 187.0
BYD3_k127_7115176_0 Multicopper oxidase - - - 0.0 1107.0
BYD3_k127_7115176_1 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 2.659e-288 891.0
BYD3_k127_7115176_12 PFAM Prephenate dehydrogenase K04517 - 1.3.1.12 0.000006807 57.0
BYD3_k127_7115176_2 PLD-like domain K06131 - - 7.39e-225 706.0
BYD3_k127_7115176_3 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 593.0
BYD3_k127_7115176_4 Pfam:UPF0118 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001938 258.0
BYD3_k127_7115176_5 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007243 250.0
BYD3_k127_7115176_6 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000008634 241.0
BYD3_k127_7115176_7 3-hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000001087 169.0
BYD3_k127_7115176_8 YceI-like domain - - - 0.000000000000000000000000000000000000000000001237 173.0
BYD3_k127_7115176_9 response to pH - - - 0.000000000009172 66.0
BYD3_k127_7142296_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.0 1303.0
BYD3_k127_7142296_1 MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004012 601.0
BYD3_k127_7142296_10 phosphoserine phosphatase activity K07315,K16928 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000001558 204.0
BYD3_k127_7142296_11 Cupin 2, conserved barrel domain protein K00971,K01809,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000001105 156.0
BYD3_k127_7142296_12 protein phosphatase 2C domain protein - - - 0.000000000000000000000009609 118.0
BYD3_k127_7142296_13 Sigma-54 interaction domain K02481,K02667 - - 0.00000000000009223 78.0
BYD3_k127_7142296_14 PEP-CTERM motif - - - 0.00000000467 66.0
BYD3_k127_7142296_15 PFAM PEP-CTERM motif - - - 0.00003184 54.0
BYD3_k127_7142296_2 Bacterial regulatory protein, Fis family K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008065 550.0
BYD3_k127_7142296_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009759 499.0
BYD3_k127_7142296_4 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 470.0
BYD3_k127_7142296_5 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 349.0
BYD3_k127_7142296_6 PAS domain containing protein K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 331.0
BYD3_k127_7142296_7 DJ-1/PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 286.0
BYD3_k127_7142296_8 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K14161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007877 275.0
BYD3_k127_7142296_9 MOSC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003127 256.0
BYD3_k127_7155264_0 serine threonine protein kinase K12132 - 2.7.11.1 5.222e-202 662.0
BYD3_k127_7155264_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000005113 218.0
BYD3_k127_7155264_2 YGGT family K02221 - - 0.0000000005043 68.0
BYD3_k127_7180814_0 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000005463 258.0
BYD3_k127_7180814_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000003524 267.0
BYD3_k127_7180814_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000001516 220.0
BYD3_k127_7180814_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.0000000000000000000000000000000000000000000001848 179.0
BYD3_k127_7180814_4 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.0000000000000000000000000000000000604 151.0
BYD3_k127_7180814_5 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000001771 113.0
BYD3_k127_7180814_6 protein with SCP PR1 domains - - - 0.0000000000000000000008137 101.0
BYD3_k127_7180814_8 serine threonine protein kinase K08884,K12132 GO:0000270,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009605,GO:0009607,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0010698,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0022603,GO:0022604,GO:0030145,GO:0030203,GO:0030234,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032091,GO:0034645,GO:0036211,GO:0040007,GO:0042304,GO:0042546,GO:0042802,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043388,GO:0043393,GO:0043412,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046872,GO:0046890,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051055,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0075136,GO:0080090,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.11.1 0.0001195 52.0
BYD3_k127_7188720_0 PFAM Alcohol dehydrogenase - - - 1.135e-203 639.0
BYD3_k127_7188720_1 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000483 571.0
BYD3_k127_7188720_11 Domain of unknown function DUF11 - - - 0.000002002 63.0
BYD3_k127_7188720_12 domain protein K14274 - - 0.00000456 62.0
BYD3_k127_7188720_2 alpha-L-arabinofuranosidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009977 512.0
BYD3_k127_7188720_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 297.0
BYD3_k127_7188720_4 Belongs to the Dps family - - - 0.0000000000000000000000000000000000000000000000000000861 196.0
BYD3_k127_7188720_7 - - - - 0.000000000000000000000000005858 113.0
BYD3_k127_7188720_8 WD40-like Beta Propeller Repeat K03641,K08676 - - 0.00000000000000000001309 110.0
BYD3_k127_7188720_9 serine-type endopeptidase activity K20276 - - 0.00000000000001573 90.0
BYD3_k127_7222669_0 ASPIC and UnbV - - - 1.045e-215 688.0
BYD3_k127_7222669_1 ROK family - - - 0.0000000000000000000000004706 110.0
BYD3_k127_7222669_2 - - - - 0.0000000003246 62.0
BYD3_k127_7233835_0 PBS lyase HEAT-like repeat - - - 7.898e-213 683.0
BYD3_k127_7233835_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 591.0
BYD3_k127_7233835_10 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000003962 179.0
BYD3_k127_7233835_11 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000007279 155.0
BYD3_k127_7233835_12 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000004251 140.0
BYD3_k127_7233835_2 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005138 543.0
BYD3_k127_7233835_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 501.0
BYD3_k127_7233835_4 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 464.0
BYD3_k127_7233835_5 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008348 362.0
BYD3_k127_7233835_6 Na dependent nucleoside transporter K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 359.0
BYD3_k127_7233835_7 Methyltransferase, chemotaxis proteins K00575,K13486 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 332.0
BYD3_k127_7233835_8 CheC inhibitor of MCP methylation K03410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004294 252.0
BYD3_k127_7233835_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005875 254.0
BYD3_k127_7273764_0 TIGRFAM MazG family protein K02428,K04765 - 3.6.1.66,3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000002494 258.0
BYD3_k127_7273764_1 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000005124 258.0
BYD3_k127_7273764_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000002018 102.0
BYD3_k127_7273764_3 Domain of unknown function (DUF1844) - - - 0.000000000001244 77.0
BYD3_k127_7286984_0 Lamin Tail Domain K07004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006524 561.0
BYD3_k127_7286984_1 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.0000000000000000000001276 100.0
BYD3_k127_7286984_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000005402 74.0
BYD3_k127_732564_0 DNA polymerase K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 463.0
BYD3_k127_732564_1 Major facilitator Superfamily K08223 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009653 380.0
BYD3_k127_732564_2 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 299.0
BYD3_k127_732564_3 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000004097 239.0
BYD3_k127_732564_4 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000001377 227.0
BYD3_k127_732564_5 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000009752 137.0
BYD3_k127_732564_6 Protein of unknown function (DUF664) - - - 0.00000006083 61.0
BYD3_k127_7359856_0 cellulose binding - - - 0.0 1043.0
BYD3_k127_7359856_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 570.0
BYD3_k127_7359856_10 Domain of unknown function (DUF4162) K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009833 301.0
BYD3_k127_7359856_11 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 301.0
BYD3_k127_7359856_12 PFAM Glutamine cyclotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002681 281.0
BYD3_k127_7359856_13 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003932 289.0
BYD3_k127_7359856_14 Domain of unknown function (DUF3488) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004416 293.0
BYD3_k127_7359856_15 Uracil DNA glycosylase superfamily K01934,K03649 GO:0000700,GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008263,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.28,6.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000005107 260.0
BYD3_k127_7359856_16 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000005162 233.0
BYD3_k127_7359856_17 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000001907 182.0
BYD3_k127_7359856_18 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000000009501 142.0
BYD3_k127_7359856_19 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000001045 139.0
BYD3_k127_7359856_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007112 527.0
BYD3_k127_7359856_20 oxidoreductase activity - - - 0.00000000000000000000000000000006979 144.0
BYD3_k127_7359856_21 - - - - 0.000000000000000000000000000006889 119.0
BYD3_k127_7359856_22 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000374 110.0
BYD3_k127_7359856_23 Response regulator receiver - - - 0.000000000000000000000005223 105.0
BYD3_k127_7359856_24 PFAM Adenylate cyclase K05873 - 4.6.1.1 0.000000000000000000000182 106.0
BYD3_k127_7359856_25 - - - - 0.000000000000005312 85.0
BYD3_k127_7359856_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006736 451.0
BYD3_k127_7359856_4 Belongs to the proline racemase family K01777 - 5.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 424.0
BYD3_k127_7359856_5 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 418.0
BYD3_k127_7359856_6 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008634 403.0
BYD3_k127_7359856_7 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 326.0
BYD3_k127_7359856_8 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 306.0
BYD3_k127_7359856_9 Hydrolase Family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 305.0
BYD3_k127_744826_0 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 627.0
BYD3_k127_744826_1 Type II secretion system (T2SS), protein F K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 345.0
BYD3_k127_744826_2 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008366 329.0
BYD3_k127_744826_3 Pyridoxamine 5'-phosphate oxidase like - - - 0.000000000000000000000000000000000000000000000000000000000002992 213.0
BYD3_k127_7475793_0 Carbamoyltransferase C-terminus K00612 - - 6.047e-260 813.0
BYD3_k127_7475793_1 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 451.0
BYD3_k127_7475793_2 PFAM glycosyl transferase family 2 - - - 0.000000000000000000000000000001515 129.0
BYD3_k127_7475793_3 - - - - 0.0000000000003223 70.0
BYD3_k127_7475793_4 - - - - 0.0000000001121 70.0
BYD3_k127_7478208_0 Condensation domain - - - 0.0 2266.0
BYD3_k127_7478208_1 TIGRFAM amino acid adenylation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 457.0
BYD3_k127_7480027_0 cobalamin-transporting ATPase activity K02014,K16092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 486.0
BYD3_k127_7480027_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000003086 213.0
BYD3_k127_7480027_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000001097 70.0
BYD3_k127_7480600_0 Carboxypeptidase regulatory-like domain - - - 3.889e-296 942.0
BYD3_k127_7480600_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 404.0
BYD3_k127_7480600_2 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 289.0
BYD3_k127_7480600_3 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000007233 265.0
BYD3_k127_7480600_4 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000005288 111.0
BYD3_k127_7480600_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000007041 93.0
BYD3_k127_7480600_6 Belongs to the UPF0312 family - - - 0.0000000966 61.0
BYD3_k127_7489250_0 AMP-binding enzyme - - - 0.0 1307.0
BYD3_k127_7489250_1 Non-ribosomal peptide synthetase modules and related - - - 5.231e-309 990.0
BYD3_k127_7489250_2 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 8.7e-247 776.0
BYD3_k127_7489250_3 Methylaspartate mutase K19268 - 5.4.99.1 1.08e-238 755.0
BYD3_k127_7489250_4 Asp/Glu/Hydantoin racemase K01779 - 5.1.1.13 0.000000000000000000000000000000000000000000000000000000004117 207.0
BYD3_k127_7493034_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 7.498e-203 641.0
BYD3_k127_7493034_1 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 1.352e-200 633.0
BYD3_k127_7493034_10 - - - - 0.00000000000000000001361 96.0
BYD3_k127_7493034_11 Belongs to the UPF0374 family K07586 - - 0.0000000000000001689 85.0
BYD3_k127_7493034_12 PFAM Fibronectin, type III domain K01179,K06882 - 3.2.1.4 0.00000000000001812 85.0
BYD3_k127_7493034_13 - - - - 0.00005738 49.0
BYD3_k127_7493034_2 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 419.0
BYD3_k127_7493034_3 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006757 286.0
BYD3_k127_7493034_4 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005082 265.0
BYD3_k127_7493034_5 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000007235 246.0
BYD3_k127_7493034_6 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000008622 244.0
BYD3_k127_7493034_7 Permease, YjgP YjgQ - - - 0.00000000000000000000000000000000000000000000000000002907 211.0
BYD3_k127_7493034_8 Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000000003793 192.0
BYD3_k127_7493034_9 Involved in DNA repair and RecF pathway recombination K03474,K03584 GO:0008150,GO:0009314,GO:0009628,GO:0050896 2.6.99.2 0.000000000000000000000000000000000001395 147.0
BYD3_k127_7501664_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 1.232e-255 816.0
BYD3_k127_7501664_1 D-alanyl-d-alanine carboxypeptidase K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 330.0
BYD3_k127_7501664_10 Tetratricopeptide repeat - - - 0.000000001176 68.0
BYD3_k127_7501664_11 Modulates RecA activity K03565 - - 0.000000008931 63.0
BYD3_k127_7501664_12 Putative peptidoglycan binding domain - - - 0.0000001733 57.0
BYD3_k127_7501664_13 Bacterial PH domain K08981 - - 0.0000004459 59.0
BYD3_k127_7501664_2 L-asparaginase II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005106 303.0
BYD3_k127_7501664_3 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000178 261.0
BYD3_k127_7501664_4 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000458 235.0
BYD3_k127_7501664_5 COG1520 FOG WD40-like repeat - - - 0.000000000000000000000000000000000000000000004859 178.0
BYD3_k127_7501664_6 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000002351 155.0
BYD3_k127_7501664_7 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0030312,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000000000000000007638 133.0
BYD3_k127_7501664_8 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000000009006 112.0
BYD3_k127_7501664_9 3D domain - - - 0.0000000000000000007198 93.0
BYD3_k127_7505950_0 serine-type exopeptidase activity K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 1.003e-307 958.0
BYD3_k127_7505950_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 578.0
BYD3_k127_7505950_10 Disulphide isomerase - - - 0.000000000000000000000000000000000000000000000000000009709 197.0
BYD3_k127_7505950_11 Conserved hypothetical protein 95 - - - 0.00000000000000000000000000000000000000000004584 166.0
BYD3_k127_7505950_12 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 - 3.4.16.4 0.0000000000000000000000000000000000000002692 166.0
BYD3_k127_7505950_13 Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine 7-oxoG) from DNA. Also nicks DNA at apurinic apyrimidinic sites (AP sites) K03653 - 4.2.99.18 0.000000000000000000000000000000000000066 150.0
BYD3_k127_7505950_14 - - - - 0.000000000000000000000000000002297 124.0
BYD3_k127_7505950_15 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000006828 114.0
BYD3_k127_7505950_16 PIN domain - - - 0.000000000000000000000001119 109.0
BYD3_k127_7505950_17 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K02029,K02030 - - 0.0000000000000000001405 91.0
BYD3_k127_7505950_18 PEP-CTERM motif - - - 0.00000000000007306 80.0
BYD3_k127_7505950_19 Pilus assembly protein PilX K02673 - - 0.0000000000008586 81.0
BYD3_k127_7505950_2 Glycosyl hydrolase family 47 K01230 - 3.2.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006042 547.0
BYD3_k127_7505950_20 gag-polyprotein putative aspartyl protease - - - 0.0000000002452 73.0
BYD3_k127_7505950_21 pilus assembly protein PilW K02672 - - 0.0006424 50.0
BYD3_k127_7505950_3 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 505.0
BYD3_k127_7505950_4 Aminotransferase class-III K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007748 488.0
BYD3_k127_7505950_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 332.0
BYD3_k127_7505950_6 Amidohydrolase family K12960,K20810 - 3.5.4.28,3.5.4.31,3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 321.0
BYD3_k127_7505950_7 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0052855,GO:0052856,GO:0052857 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 325.0
BYD3_k127_7505950_9 COG1126 ABC-type polar amino acid transport system ATPase component K02028,K02029,K02030,K09972 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000001209 224.0
BYD3_k127_7520665_0 ATPases associated with a variety of cellular activities K06147 - - 3.705e-208 663.0
BYD3_k127_7520665_1 D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000011 228.0
BYD3_k127_7520665_2 Uncharacterised nucleotidyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000005522 221.0
BYD3_k127_7520665_3 PRMT5 arginine-N-methyltransferase K11434 - 2.1.1.319 0.000000000000000000000005805 103.0
BYD3_k127_7527866_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 1.496e-258 811.0
BYD3_k127_7527866_1 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 484.0
BYD3_k127_7527866_2 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008534 422.0
BYD3_k127_7527866_3 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 307.0
BYD3_k127_7527866_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000006357 130.0
BYD3_k127_7527866_5 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.00000000009947 63.0
BYD3_k127_7543914_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 466.0
BYD3_k127_7543914_1 protoporphyrinogen oxidase activity K00231,K14266 - 1.14.19.9,1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009419 452.0
BYD3_k127_7543914_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 420.0
BYD3_k127_7543914_3 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 369.0
BYD3_k127_7543914_4 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000002148 225.0
BYD3_k127_7548467_0 efflux transmembrane transporter activity - - - 3.388e-207 672.0
BYD3_k127_7548467_1 HELICc2 K03722 - 3.6.4.12 8.139e-198 636.0
BYD3_k127_7548467_10 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000001854 133.0
BYD3_k127_7548467_11 cheY-homologous receiver domain - - - 0.000000000000000000000000008606 115.0
BYD3_k127_7548467_12 Pfam:N_methyl_2 - - - 0.000000000000000003832 90.0
BYD3_k127_7548467_13 Pfam:N_methyl_2 - - - 0.000000000000000007843 91.0
BYD3_k127_7548467_14 Pfam:N_methyl_2 - - - 0.00000000000000003094 90.0
BYD3_k127_7548467_15 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000172 60.0
BYD3_k127_7548467_16 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00006674 53.0
BYD3_k127_7548467_2 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 475.0
BYD3_k127_7548467_3 Two component, sigma54 specific, transcriptional regulator, Fis family K07713,K07714,K19641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 411.0
BYD3_k127_7548467_4 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006719 401.0
BYD3_k127_7548467_5 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 316.0
BYD3_k127_7548467_6 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001625 286.0
BYD3_k127_7548467_7 - - - - 0.0000000000000000000000000000000000000000000000000000007735 202.0
BYD3_k127_7548467_8 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000397 153.0
BYD3_k127_7548467_9 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000001332 145.0
BYD3_k127_7554893_0 Beta-glucan synthesis-associated protein (SKN1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001084 285.0
BYD3_k127_7554893_1 Peptidase family M50 K16922 - - 0.000000000000000000000000000000000001129 154.0
BYD3_k127_7554893_2 Glycosyl transferase, family 2 - - - 0.00000000000000000000009189 102.0
BYD3_k127_7554893_3 amine dehydrogenase activity - - - 0.000000000000000005878 96.0
BYD3_k127_7554893_4 helix_turn_helix, arabinose operon control protein - - - 0.000000000000002198 79.0
BYD3_k127_7554893_5 SNARE associated Golgi protein - - - 0.0000001391 55.0
BYD3_k127_7554893_6 Rhodanese domain protein - - - 0.0000001912 53.0
BYD3_k127_7590090_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.27e-201 647.0
BYD3_k127_7590090_1 peptidase dimerisation domain protein - - - 0.0000000000000000000000000000000000004579 145.0
BYD3_k127_7590090_3 Bacterial regulatory protein, Fis family - - - 0.000105 50.0
BYD3_k127_7608540_0 Phosphoenolpyruvate phosphomutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 356.0
BYD3_k127_7608540_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 296.0
BYD3_k127_7608540_2 PFAM NIPSNAP family containing protein - - - 0.000000000000000000000000000000000000000000000000000001723 192.0
BYD3_k127_7608540_3 cobalamin-transporting ATPase activity K02014,K16092 - - 0.000000000000000000000000000000000000001874 158.0
BYD3_k127_7612383_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 3.495e-307 960.0
BYD3_k127_7612383_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009596 320.0
BYD3_k127_7612383_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 318.0
BYD3_k127_7612383_3 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000002672 218.0
BYD3_k127_7612383_4 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.00000000000000000000000000000000000000005088 156.0
BYD3_k127_7612383_5 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.000000000000000000000000000006098 122.0
BYD3_k127_7612383_6 domain, Protein - - - 0.00000000000000000000000002484 111.0
BYD3_k127_7612383_7 - - - - 0.000000001012 71.0
BYD3_k127_7803654_0 Carboxypeptidase regulatory-like domain - - - 0.0 1137.0
BYD3_k127_7803654_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0 1050.0
BYD3_k127_7803654_2 copper-translocating P-type ATPase K17686 - 3.6.3.54 7.312e-315 981.0
BYD3_k127_7803654_3 hydrolase, family 3 K05349 - 3.2.1.21 1.881e-274 863.0
BYD3_k127_7803654_4 Putative glucoamylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004901 424.0
BYD3_k127_7803654_5 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 349.0
BYD3_k127_7803654_6 Belongs to the P-Pant transferase superfamily K06133 - - 0.000000000000000000000000000000000000000000000000000000000002399 217.0
BYD3_k127_7803654_7 PFAM Plasmid stabilisation system protein - - - 0.000000000000000000000000000426 116.0
BYD3_k127_7803654_8 - - - - 0.0000000000000003815 79.0
BYD3_k127_7803654_9 serine threonine protein kinase - - - 0.0000005462 63.0
BYD3_k127_7804011_0 CarboxypepD_reg-like domain - - - 3.713e-235 773.0
BYD3_k127_7804011_1 WD domain, G-beta repeat - - - 1.606e-229 756.0
BYD3_k127_7804011_10 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000007364 242.0
BYD3_k127_7804011_11 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000005992 235.0
BYD3_k127_7804011_12 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000004101 169.0
BYD3_k127_7804011_13 SEC-C domain protein K09858 - - 0.00000000000000000000000000000000000000000000944 167.0
BYD3_k127_7804011_14 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000004121 147.0
BYD3_k127_7804011_15 Protein of unknown function (DUF3761) - - - 0.00000000002654 68.0
BYD3_k127_7804011_2 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 555.0
BYD3_k127_7804011_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006664 494.0
BYD3_k127_7804011_4 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005625 429.0
BYD3_k127_7804011_5 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 394.0
BYD3_k127_7804011_6 protein with SCP PR1 domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009019 369.0
BYD3_k127_7804011_7 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 322.0
BYD3_k127_7804011_8 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 300.0
BYD3_k127_7804011_9 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005185 271.0
BYD3_k127_7809287_0 NADH oxidase - - - 4.116e-202 639.0
BYD3_k127_7809287_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K04105,K04110 - 6.2.1.25,6.2.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005178 520.0
BYD3_k127_7809287_10 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000006321 137.0
BYD3_k127_7809287_11 MobA-like NTP transferase domain - - - 0.0000000000000000000000000000007002 130.0
BYD3_k127_7809287_12 PFAM response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000000349 106.0
BYD3_k127_7809287_13 Thioredoxin-like K06196 - - 0.0000000005092 67.0
BYD3_k127_7809287_2 Aminotransferase class-V K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 462.0
BYD3_k127_7809287_3 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 412.0
BYD3_k127_7809287_4 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 364.0
BYD3_k127_7809287_5 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 352.0
BYD3_k127_7809287_6 PFAM Enoyl-CoA hydratase isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 296.0
BYD3_k127_7809287_7 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007024 295.0
BYD3_k127_7809287_8 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000005349 259.0
BYD3_k127_7809287_9 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000007417 231.0
BYD3_k127_7832612_0 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000649 538.0
BYD3_k127_7832612_1 protein kinase related protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000759 523.0
BYD3_k127_7832612_2 beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009065 484.0
BYD3_k127_7832612_3 Iron-containing alcohol dehydrogenase K00001,K13954 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 408.0
BYD3_k127_7832612_4 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 336.0
BYD3_k127_7832612_5 protein kinase related protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 310.0
BYD3_k127_7832612_6 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000006994 132.0
BYD3_k127_7832612_7 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000005836 123.0
BYD3_k127_7832612_8 Ankyrin repeat-containing protein K21440 - - 0.00000000000007752 81.0
BYD3_k127_7840374_0 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 530.0
BYD3_k127_7840374_1 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005687 474.0
BYD3_k127_7840374_2 PFAM peptidase M16 domain protein K07263 - - 0.000000000000000000000000000000000000000000000000000000001805 207.0
BYD3_k127_7890673_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 541.0
BYD3_k127_7941692_0 alcohol dehydrogenase K00001,K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008458 501.0
BYD3_k127_7955659_0 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004652 430.0
BYD3_k127_7955659_1 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 360.0
BYD3_k127_7955659_2 - - - - 0.0000005358 58.0
BYD3_k127_7989129_0 von Willebrand factor type A domain - - - 4.484e-256 841.0
BYD3_k127_7989129_2 sequence-specific DNA binding K07726 - - 0.000000000000000000000000000000000000000005019 156.0
BYD3_k127_7989129_3 Cytotoxic translational repressor of toxin-antitoxin stability system - - - 0.000000000000000000000000000000000005819 138.0
BYD3_k127_7992908_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 548.0
BYD3_k127_7992908_2 positive regulation of growth K19687 - - 0.0000000000002873 79.0
BYD3_k127_7992908_3 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000271 55.0
BYD3_k127_8125424_0 Forkhead associated domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 351.0
BYD3_k127_8125424_1 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007381 271.0
BYD3_k127_8125424_2 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000164 216.0
BYD3_k127_8125424_3 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.0000000000000000000000000000000000000000000001638 172.0
BYD3_k127_8125424_4 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000004019 144.0
BYD3_k127_8125424_5 Histidine kinase-like ATPases - - - 0.00000000000000000000000897 105.0
BYD3_k127_8125424_6 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 GO:0003674,GO:0003824,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016491,GO:0050896,GO:0055114 1.2.7.1 0.0000000000000001225 83.0
BYD3_k127_8125424_7 response regulator - - - 0.0000000000003653 74.0
BYD3_k127_8160574_0 Tricorn protease C1 domain K08676 - - 0.0 1266.0
BYD3_k127_8160574_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 576.0
BYD3_k127_8160574_2 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 504.0
BYD3_k127_8160574_3 von Willebrand factor, type A - - - 0.00000000000000000000005589 111.0
BYD3_k127_8160574_4 protein conserved in cyanobacteria - - - 0.0000000000000000001007 97.0
BYD3_k127_8160574_5 Amidohydrolase family - - - 0.0000000000000000004702 90.0
BYD3_k127_8160574_6 Phage integrase family - - - 0.0000000000113 68.0
BYD3_k127_8184570_0 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 292.0
BYD3_k127_8184570_1 enzyme related to lactoylglutathione lyase K06996 - - 0.0000000000000000000000000000000000000000000000000000000000000000001451 239.0
BYD3_k127_8184570_2 EamA-like transporter family K07790 - - 0.0000000000000000000000000000000000000000000000000003515 195.0
BYD3_k127_8184570_3 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000001108 182.0
BYD3_k127_8184570_4 recA bacterial DNA recombination protein - - - 0.000000000000000000000000000000000000000000000001133 183.0
BYD3_k127_8191610_0 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 379.0
BYD3_k127_8191610_1 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 340.0
BYD3_k127_8191610_2 ASPIC and UnbV - - - 0.0000000000000000000000000000003698 123.0
BYD3_k127_8191610_3 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000000000000002537 116.0
BYD3_k127_8191610_4 Dodecin K09165 - - 0.000000000000000000001251 96.0
BYD3_k127_8191610_5 ASPIC and UnbV - - - 0.00000003208 59.0
BYD3_k127_8196229_0 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 597.0
BYD3_k127_8196229_1 PFAM polysaccharide biosynthesis protein K03328 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 469.0
BYD3_k127_8196229_10 Methyltransferase domain - - - 0.000000000000000000000001206 115.0
BYD3_k127_8196229_11 O-antigen ligase like membrane protein - - - 0.000000001369 70.0
BYD3_k127_8196229_2 teichoic acid transport K01990,K09689,K09691 - 3.6.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 347.0
BYD3_k127_8196229_3 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000933 332.0
BYD3_k127_8196229_4 macromolecule localization K01992,K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 326.0
BYD3_k127_8196229_5 TIGRFAM polysaccharide deactylase family protein, PEP-CTERM locus subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 308.0
BYD3_k127_8196229_6 rRNA (guanine-N2-)-methyltransferase activity K15257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007635 308.0
BYD3_k127_8196229_7 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001347 267.0
BYD3_k127_8196229_8 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004272 267.0
BYD3_k127_8196229_9 methyltransferase - - - 0.0000000000000000000000000000004349 130.0
BYD3_k127_8221491_0 PFAM DNA mismatch repair protein MutS domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 501.0
BYD3_k127_8221491_1 enterobactin catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 476.0
BYD3_k127_8221491_10 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000002838 214.0
BYD3_k127_8221491_11 actin binding - - - 0.0000000000000000000000000000000000000000000000000001076 204.0
BYD3_k127_8221491_12 aminoglycoside hydroxyurea antibiotic resistance kinase K04343 - 2.7.1.72 0.00000000000000000000000000000000000006681 154.0
BYD3_k127_8221491_13 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000000006831 96.0
BYD3_k127_8221491_14 COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K10126 - - 0.000003021 54.0
BYD3_k127_8221491_2 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 437.0
BYD3_k127_8221491_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005204 456.0
BYD3_k127_8221491_4 ThiF family K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009956 349.0
BYD3_k127_8221491_5 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 302.0
BYD3_k127_8221491_6 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002211 280.0
BYD3_k127_8221491_7 RNA 2'-O ribose methyltransferase substrate binding K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000006085 254.0
BYD3_k127_8221491_8 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000225 238.0
BYD3_k127_8221491_9 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000004115 231.0
BYD3_k127_826289_0 Peptidase family M49 - - - 7.734e-206 656.0
BYD3_k127_826289_1 Belongs to the HpcH HpaI aldolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 556.0
BYD3_k127_826289_10 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000007695 217.0
BYD3_k127_826289_11 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.000000000000000000000000000000000000000000000000000006907 205.0
BYD3_k127_826289_12 Protein of unknown function (DUF2585) - - - 0.00000000000000000000000000000000007857 140.0
BYD3_k127_826289_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000002176 132.0
BYD3_k127_826289_14 Thioredoxin-like - - - 0.000000000000000000001804 108.0
BYD3_k127_826289_15 cell redox homeostasis K22278 - 3.5.1.104 0.00000000000000000011 102.0
BYD3_k127_826289_16 HEAT repeats - - - 0.000000003106 70.0
BYD3_k127_826289_17 Thioredoxin-like - - - 0.0000004783 60.0
BYD3_k127_826289_18 Bacterial regulatory protein, Fis family - - - 0.0002746 48.0
BYD3_k127_826289_19 Putative zinc-finger - - - 0.0008567 50.0
BYD3_k127_826289_2 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009551 492.0
BYD3_k127_826289_3 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 451.0
BYD3_k127_826289_4 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006728 446.0
BYD3_k127_826289_5 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 441.0
BYD3_k127_826289_6 Aldehyde dehydrogenase family K22445 - 1.2.99.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 436.0
BYD3_k127_826289_7 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007529 365.0
BYD3_k127_826289_8 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008002 313.0
BYD3_k127_826289_9 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009752 279.0
BYD3_k127_8270644_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01847,K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 434.0
BYD3_k127_8270644_1 TIGRFAM oligopeptide dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 423.0
BYD3_k127_8270644_10 Yip1 domain - - - 0.0000000000000000000001397 107.0
BYD3_k127_8270644_11 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000004076 74.0
BYD3_k127_8270644_2 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 408.0
BYD3_k127_8270644_3 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 342.0
BYD3_k127_8270644_4 polysaccharide deacetylase K22278 - 3.5.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 340.0
BYD3_k127_8270644_5 COGs COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 343.0
BYD3_k127_8270644_6 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 342.0
BYD3_k127_8270644_7 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 335.0
BYD3_k127_8270644_8 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000898 291.0
BYD3_k127_8270644_9 Biotin-lipoyl like K02005 - - 0.0000000000000000000000000000000000000000000000000002627 203.0
BYD3_k127_8318539_0 Multicopper oxidase - - - 0.0 1122.0
BYD3_k127_8318539_1 Multicopper oxidase K14588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 423.0
BYD3_k127_8318539_2 response regulator receiver K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 379.0
BYD3_k127_8318539_3 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000277 224.0
BYD3_k127_8318539_4 SCO1/SenC - - - 0.000000000000000000000000000000000000000000000000000000002366 207.0
BYD3_k127_8318539_5 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000001146 198.0
BYD3_k127_8318539_6 Bacterial Ig-like domain (group 3) - - - 0.0000000000000000000000000000000000000000000000001312 200.0
BYD3_k127_8318539_7 histidine kinase - - - 0.000000000000000000000000000000000000000000000001144 189.0
BYD3_k127_8318539_8 Transmits chemoreceptor signals to flagelllar motor components K03413 - - 0.000000000000001014 81.0
BYD3_k127_8457635_0 Taurine catabolism dioxygenase TauD, TfdA - - - 8.713e-238 769.0
BYD3_k127_8457635_1 radical SAM domain protein K20444 - - 3.733e-208 672.0
BYD3_k127_8457635_2 4-Hydroxyphenylpyruvate dioxygenase K00457,K16421 GO:0003674,GO:0003824,GO:0003868,GO:0006082,GO:0006520,GO:0006570,GO:0006572,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0051213,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.27,1.13.11.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009724 477.0
BYD3_k127_8457635_3 Linear gramicidin synthase subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 475.0
BYD3_k127_8457635_4 PFAM aminotransferase class I and II K05825 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009861 428.0
BYD3_k127_8457635_5 non-ribosomal peptide synthetase K16416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002065 280.0
BYD3_k127_8457635_6 Non-ribosomal peptide synthetase modules and related proteins - - - 0.00006555 56.0
BYD3_k127_8460282_0 homoserine dehydrogenase K12524 - 1.1.1.3,2.7.2.4 4.576e-250 796.0
BYD3_k127_8460282_1 cAMP biosynthetic process K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005614 415.0
BYD3_k127_8460282_2 Pfam Ion transport protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 352.0
BYD3_k127_8460282_3 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004392 269.0
BYD3_k127_8460282_4 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000000001066 220.0
BYD3_k127_8460282_5 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000007188 203.0
BYD3_k127_8460282_6 CotH kinase protein - - - 0.00000000000329 78.0
BYD3_k127_8463286_0 COG0226 ABC-type phosphate transport system periplasmic K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007654 438.0
BYD3_k127_8463286_1 siderophore transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000009833 239.0
BYD3_k127_8463286_2 Two component transcriptional regulator, winged helix family - - - 0.00000001291 61.0
BYD3_k127_8490238_0 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 310.0
BYD3_k127_8490238_1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000003089 211.0
BYD3_k127_8490238_2 - - - - 0.00000000000000000003086 90.0
BYD3_k127_8490238_3 - - - - 0.0000000000395 71.0
BYD3_k127_8490238_4 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000005141 74.0
BYD3_k127_8490238_5 - - - - 0.0000002499 53.0
BYD3_k127_8490238_6 Sh3 type 3 domain protein - - - 0.0000004997 61.0
BYD3_k127_8490238_7 - K01387,K06399 - 3.4.21.116,3.4.24.3 0.000002543 60.0
BYD3_k127_8499514_0 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042 411.0
BYD3_k127_8499514_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003613 277.0
BYD3_k127_8499514_2 peptidyl-prolyl cis-trans isomerase K03772,K03773 - 5.2.1.8 0.000000000000000000000000000002925 128.0
BYD3_k127_8499514_3 Sigma-70, region 4 - - - 0.00000000000000000000000000003418 124.0
BYD3_k127_8499514_4 - - - - 0.0000068 53.0
BYD3_k127_8499514_5 ATP-independent chaperone mediated protein folding K06006 - - 0.0001574 51.0
BYD3_k127_8521522_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 4.895e-269 852.0
BYD3_k127_8521522_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 608.0
BYD3_k127_8521522_10 4Fe-4S single cluster domain of Ferredoxin I - - - 0.00000000000000000000000003529 109.0
BYD3_k127_8521522_11 - - - - 0.0000000000000000000000002911 106.0
BYD3_k127_8521522_12 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000025 100.0
BYD3_k127_8521522_13 (Rieske (2Fe-2S) domain) K00363,K05710 - 1.7.1.15 0.00000000000000000001591 96.0
BYD3_k127_8521522_14 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000002555 95.0
BYD3_k127_8521522_15 CsbD-like - - - 0.000000001233 61.0
BYD3_k127_8521522_2 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009598 345.0
BYD3_k127_8521522_3 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 308.0
BYD3_k127_8521522_4 Cation transport regulator - - - 0.0000000000000000000000000000000000000000000003031 172.0
BYD3_k127_8521522_5 Transcriptional coactivator pterin dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000000008902 169.0
BYD3_k127_8521522_6 DinB superfamily - - - 0.000000000000000000000000000000000000002175 152.0
BYD3_k127_8521522_7 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000002445 152.0
BYD3_k127_8521522_8 Protein of unknown function (DUF541) K09807 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000003876 132.0
BYD3_k127_8521522_9 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000001484 129.0
BYD3_k127_8530525_0 Parallel beta-helix repeats K12287 - - 0.0000000000000000000000000000000000000000000000000000006525 222.0
BYD3_k127_8530525_1 Soluble NSF attachment protein, SNAP - - - 0.0000000000000000000000000000000000002587 162.0
BYD3_k127_8531944_0 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001226 283.0
BYD3_k127_8531944_1 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000001957 252.0
BYD3_k127_8531944_2 Galactose oxidase, central domain - - - 0.00000000000000000000000000000000004549 156.0
BYD3_k127_8531944_3 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.000000000000000000000000002041 113.0
BYD3_k127_8531944_4 Metalloprotease K11749 - - 0.0000000001201 68.0
BYD3_k127_8531944_5 amine dehydrogenase activity K01183,K01729 - 3.2.1.14,4.2.2.3 0.00000001878 68.0
BYD3_k127_8531944_6 Transcriptional regulator K07110 - - 0.00002493 50.0
BYD3_k127_8533736_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 610.0
BYD3_k127_8533736_1 transferase activity, transferring glycosyl groups K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006288 316.0
BYD3_k127_8533736_10 Cellulase (glycosyl hydrolase family 5) K01179 - 3.2.1.4 0.0000000000005873 83.0
BYD3_k127_8533736_11 guanyl-nucleotide exchange factor activity K01179,K03929,K09612,K12287,K19701,K19702 GO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005623,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.2.1.4,3.4.11.10,3.4.11.24,3.4.11.6 0.00000001187 69.0
BYD3_k127_8533736_12 Endonuclease/Exonuclease/phosphatase family - - - 0.00000001562 67.0
BYD3_k127_8533736_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000641 286.0
BYD3_k127_8533736_3 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008982 256.0
BYD3_k127_8533736_4 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000293 181.0
BYD3_k127_8533736_5 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000001138 178.0
BYD3_k127_8533736_6 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000121 173.0
BYD3_k127_8533736_7 LGFP repeat - - - 0.000000000000000000000000002518 131.0
BYD3_k127_8533736_8 PKD domain - - - 0.00000000000005335 86.0
BYD3_k127_8533736_9 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase - - - 0.0000000000002513 81.0
BYD3_k127_8542267_0 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 541.0
BYD3_k127_8542267_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006155 456.0
BYD3_k127_8542267_2 Elongation factor G, domain IV K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007824 450.0
BYD3_k127_8542267_3 - - - - 0.0000000000000000000000000000000000000000000000000002024 198.0
BYD3_k127_8542267_4 PFAM glycosyl transferase family 39 - - - 0.00000000000000000000000000000000000000000000008889 188.0
BYD3_k127_8542267_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000021 174.0
BYD3_k127_8579609_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 9.265e-290 911.0
BYD3_k127_8579609_1 AMMECR1 K06990,K09141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008908 347.0
BYD3_k127_8579609_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 327.0
BYD3_k127_8579609_3 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.000000000000000000000000000000000000000000000000000000003459 213.0
BYD3_k127_8579609_4 TIGRFAM geranylgeranyl reductase - - - 0.0000000000000000000000000000000000000002484 163.0
BYD3_k127_8617376_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1577.0
BYD3_k127_8617376_1 Phosphate acyltransferases K01897 - 6.2.1.3 3.029e-225 725.0
BYD3_k127_8617376_2 ATPase associated with various cellular K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 383.0
BYD3_k127_8617376_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 373.0
BYD3_k127_8617376_4 competence protein COMEC - - - 0.0000000000000000000000000000000000000001656 153.0
BYD3_k127_8617376_5 - - - - 0.00000000000000000000000000000000000001143 148.0
BYD3_k127_8617376_6 Pfam:N_methyl_2 - - - 0.0000004838 58.0
BYD3_k127_8618471_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 609.0
BYD3_k127_8618471_1 acyl-CoA dehydrogenase activity K09456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 544.0
BYD3_k127_8618471_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006758 484.0
BYD3_k127_8618471_3 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000008006 199.0
BYD3_k127_8658516_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 353.0
BYD3_k127_8658516_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006292 347.0
BYD3_k127_8658516_2 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 345.0
BYD3_k127_8658516_3 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000001726 75.0
BYD3_k127_8672188_0 COG3209 Rhs family protein - - - 0.0 1065.0
BYD3_k127_8672188_1 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 613.0
BYD3_k127_8672188_2 pathogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 486.0
BYD3_k127_8672188_3 cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 339.0
BYD3_k127_8672188_4 Cephalosporin hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001168 261.0
BYD3_k127_8672188_5 - - - - 0.00000000000000000000000009633 115.0
BYD3_k127_8672188_7 - - - - 0.00014 49.0
BYD3_k127_8798770_0 Carboxypeptidase regulatory-like domain - - - 0.0 1045.0
BYD3_k127_8798770_1 Sodium Bile acid symporter family K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 547.0
BYD3_k127_8798770_10 PFAM regulatory protein TetR K13770 - - 0.00000000000000000000000000000000000000000000001358 178.0
BYD3_k127_8798770_11 Putative lumazine-binding - - - 0.00000000000000000000000000000000000000000000003448 173.0
BYD3_k127_8798770_12 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.000000000000000000000000000004897 128.0
BYD3_k127_8798770_14 nuclease activity - - - 0.0004353 44.0
BYD3_k127_8798770_2 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008737 514.0
BYD3_k127_8798770_3 PFAM CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 417.0
BYD3_k127_8798770_4 Methylase involved in ubiquinone menaquinone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 387.0
BYD3_k127_8798770_5 Peptidase family S41 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008051 399.0
BYD3_k127_8798770_6 Predicted membrane protein (DUF2339) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002224 273.0
BYD3_k127_8798770_7 membrane protein, hemolysin III homolog K11068 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009811 254.0
BYD3_k127_8798770_8 Transporter, small conductance mechanosensitive ion channel MscS family protein K03442 - - 0.000000000000000000000000000000000000000000000000000000000003051 220.0
BYD3_k127_8798770_9 PFAM SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000425 215.0
BYD3_k127_8808789_0 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 0.0 1129.0
BYD3_k127_8808789_1 Fibronectin type III-like domain K05349 - 3.2.1.21 0.0 1032.0
BYD3_k127_8808789_10 Melibiase K07407 - 3.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 599.0
BYD3_k127_8808789_11 Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 488.0
BYD3_k127_8808789_12 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000588 458.0
BYD3_k127_8808789_13 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 473.0
BYD3_k127_8808789_14 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000068 473.0
BYD3_k127_8808789_15 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005864 417.0
BYD3_k127_8808789_16 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 411.0
BYD3_k127_8808789_17 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 431.0
BYD3_k127_8808789_18 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 379.0
BYD3_k127_8808789_19 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 320.0
BYD3_k127_8808789_2 Belongs to the glycosyl hydrolase 2 family K01190 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0004565,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0015925,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.23 2.872e-298 931.0
BYD3_k127_8808789_20 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 314.0
BYD3_k127_8808789_21 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006752 307.0
BYD3_k127_8808789_22 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 291.0
BYD3_k127_8808789_23 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005798 274.0
BYD3_k127_8808789_24 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000005883 246.0
BYD3_k127_8808789_25 ROK family - - - 0.00000000000000000000000000000000000000000000000000000000000000000009897 245.0
BYD3_k127_8808789_26 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000004331 216.0
BYD3_k127_8808789_27 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000000000754 202.0
BYD3_k127_8808789_28 Parallel beta-helix repeats - - - 0.0000000000000000000000000001861 126.0
BYD3_k127_8808789_29 oxidoreductase activity - - - 0.00000000000000000000000004838 125.0
BYD3_k127_8808789_3 Fibronectin type III-like domain K05349 - 3.2.1.21 1.726e-295 923.0
BYD3_k127_8808789_30 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity - - - 0.000000000000000001091 100.0
BYD3_k127_8808789_31 Belongs to the glycosyl hydrolase 26 family - - - 0.0000000000000009837 85.0
BYD3_k127_8808789_32 Belongs to the glycosyl hydrolase 2 family K01190 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0004565,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0015925,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.23 0.000000000000149 72.0
BYD3_k127_8808789_33 Peptidoglycan-binding domain 1 protein - - - 0.0000000008683 69.0
BYD3_k127_8808789_34 TPR Domain containing protein K12600 - - 0.00000004729 66.0
BYD3_k127_8808789_35 cell division - - - 0.0000007301 63.0
BYD3_k127_8808789_36 domain protein - - - 0.0001283 47.0
BYD3_k127_8808789_37 PFAM TPR repeat-containing protein - - - 0.0002043 53.0
BYD3_k127_8808789_38 - - - - 0.0002375 53.0
BYD3_k127_8808789_39 glucuronate isomerase - - - 0.0002689 46.0
BYD3_k127_8808789_4 Glycosyl hydrolase family 65, N-terminal domain K15923 - 3.2.1.51 1.133e-292 918.0
BYD3_k127_8808789_5 Two component regulator propeller - - - 8.919e-276 880.0
BYD3_k127_8808789_6 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 8.746e-259 820.0
BYD3_k127_8808789_7 Belongs to the glycosyl hydrolase 67 family K01235 - 3.2.1.139 1.051e-258 816.0
BYD3_k127_8808789_8 hydrolase family 2, sugar binding K01192 - 3.2.1.25 5.789e-251 799.0
BYD3_k127_8808789_9 ASPIC and UnbV - - - 9.907e-216 683.0
BYD3_k127_8824322_0 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000004593 253.0
BYD3_k127_8824322_1 flavoprotein involved in K transport K11816 - 1.14.13.168 0.00000000000000000000000000002463 131.0
BYD3_k127_8824322_2 Iron-sulfur cluster-binding domain - - - 0.000000000004215 73.0
BYD3_k127_8869621_0 amino acid - - - 5.802e-259 813.0
BYD3_k127_8869621_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 474.0
BYD3_k127_8869621_2 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009941 387.0
BYD3_k127_8869621_3 PspA/IM30 family K03969 - - 0.000000000000000000000000000000000000001515 156.0
BYD3_k127_8869621_4 PFAM HNH endonuclease - - - 0.00000000000000000000000000000000000000403 150.0
BYD3_k127_8869621_5 Probable zinc-ribbon domain - - - 0.00000000000000000000000000002579 120.0
BYD3_k127_8869621_6 efflux transmembrane transporter activity K02004 - - 0.00000000008752 65.0
BYD3_k127_8869621_7 - - - - 0.00000000009389 66.0
BYD3_k127_8872216_0 cell shape determining protein MreB K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 549.0
BYD3_k127_8872216_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 454.0
BYD3_k127_8872216_2 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989 377.0
BYD3_k127_8872216_3 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000002789 177.0
BYD3_k127_8872216_4 Peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000001537 171.0
BYD3_k127_8872216_5 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000001582 129.0
BYD3_k127_8872216_6 PFAM FecR protein - - - 0.00000000000000000000000000229 126.0
BYD3_k127_8872216_7 shape-determining protein MreD K03571 - - 0.000007901 55.0
BYD3_k127_8899262_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 4.775e-195 621.0
BYD3_k127_8899262_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00282 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 488.0
BYD3_k127_8899262_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 408.0
BYD3_k127_8899262_5 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000001333 165.0
BYD3_k127_8899262_6 Forkhead associated domain - - - 0.00000000000000000000000000000000002474 153.0
BYD3_k127_8899262_7 Ferredoxin - - - 0.000000000000000000000001849 109.0
BYD3_k127_8910127_0 phosphoesterase, PA-phosphatase related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 531.0
BYD3_k127_8910127_1 AAA ATPase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 456.0
BYD3_k127_8910127_2 TAP-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 357.0
BYD3_k127_8910127_3 Chlorite dismutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 289.0
BYD3_k127_8910127_4 Membrane - - - 0.00000000000000000000000000000000000000000000000000341 204.0
BYD3_k127_8910127_5 - - - - 0.000000000000000000000000000000000000000001692 171.0
BYD3_k127_8910127_6 Cytochrome b/b6/petB K00412,K03888 - - 0.00000000000000000000000000000000000000000818 167.0
BYD3_k127_8910127_7 Rieske [2Fe-2S] domain K03886 - - 0.0000000000000000000000001043 113.0
BYD3_k127_8953022_0 phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 393.0
BYD3_k127_8953022_1 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003486 382.0
BYD3_k127_8953022_2 very-long-chain-acyl-CoA dehydrogenase activity K17880,K18817 - 2.7.1.119,2.7.1.163 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002369 287.0
BYD3_k127_8953022_3 TIGRFAM molybdenum cofactor synthesis - - - 0.0000000000000000000000000000000000000000000009535 170.0
BYD3_k127_8953022_4 CoA binding domain K06929 - - 0.0000000000000000000000000000000007236 132.0
BYD3_k127_92585_0 benzoyl-CoA oxygenase K15512 - 1.14.13.208 3.365e-212 668.0
BYD3_k127_92585_1 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 365.0
BYD3_k127_92585_2 Enoyl-CoA hydratase/isomerase K15513 - 4.1.2.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 288.0
BYD3_k127_92585_3 PFAM short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005535 254.0
BYD3_k127_92585_4 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000001027 244.0
BYD3_k127_92585_5 PFAM Enoyl-CoA hydratase isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000006677 190.0
BYD3_k127_92585_6 septum formation protein Maf K06287 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.00000000000000000000000000000000000000000000001274 177.0
BYD3_k127_92585_7 Bacterial regulatory proteins, tetR family K09017 - - 0.0000000000000000000000000000000001531 140.0
BYD3_k127_92585_8 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000001806 74.0
BYD3_k127_92585_9 Belongs to the UPF0232 family - - - 0.00000003709 61.0
BYD3_k127_976917_0 Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004331 246.0
BYD3_k127_976917_1 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000003817 181.0
BYD3_k127_976917_2 von Willebrand factor, type A - - - 0.00000000000000000000000000000004092 141.0
BYD3_k127_976917_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.00000000000000003545 86.0
BYD3_k127_982927_0 TIGRFAM amino acid adenylation domain K16132 - - 0.0 2031.0
BYD3_k127_982927_1 AMP-binding enzyme - - - 0.00000000000000000000000000000000000000000000000000003622 192.0
BYD3_k127_98905_0 Protein of unknown function (DUF763) K09003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008098 590.0
BYD3_k127_98905_1 Vault protein inter-alpha-trypsin domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009015 608.0
BYD3_k127_98905_10 DinB family - - - 0.0000000000000000000000000000000000000000000007036 171.0
BYD3_k127_98905_11 HD domain - - - 0.000000000000000000000000000000000000000000001586 181.0
BYD3_k127_98905_12 PFAM penicillin-binding protein transpeptidase K05364 - - 0.00000000000000000000000000000000000000001604 173.0
BYD3_k127_98905_13 Belongs to the SEDS family K03588 GO:0002682,GO:0002684,GO:0008150,GO:0009605,GO:0009607,GO:0009987,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051301,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0075136 - 0.000000000000000000000000000000000002462 157.0
BYD3_k127_98905_14 methyltransferase K18846 - 2.1.1.180 0.0000000000000000000000000000000003262 139.0
BYD3_k127_98905_15 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000008237 132.0
BYD3_k127_98905_16 Belongs to the ompA family - - - 0.0000000000000000000000000003993 125.0
BYD3_k127_98905_18 cellulase activity - - - 0.00000000000000003571 96.0
BYD3_k127_98905_19 FHA domain - - - 0.00000000007256 72.0
BYD3_k127_98905_2 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity K03429 - 2.4.1.315 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 501.0
BYD3_k127_98905_20 antisigma factor binding - - - 0.0000001733 57.0
BYD3_k127_98905_21 Protein of unknown function (DUF2662) - - - 0.000000284 61.0
BYD3_k127_98905_22 Outer membrane protein (OmpH-like) K06142 - - 0.00004794 53.0
BYD3_k127_98905_23 Domain of unknown function (DUF4132) - - - 0.0002109 53.0
BYD3_k127_98905_24 Sigma factor PP2C-like phosphatases - - - 0.0008481 45.0
BYD3_k127_98905_3 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 464.0
BYD3_k127_98905_4 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 499.0
BYD3_k127_98905_5 PFAM NHL repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 452.0
BYD3_k127_98905_6 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 332.0
BYD3_k127_98905_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000013 203.0
BYD3_k127_98905_8 Cupin domain - - - 0.000000000000000000000000000000000000000000000005431 175.0
BYD3_k127_98905_9 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000001815 189.0