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Overview

ID MAG00119
Name BYD3_bin.32
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Actinomycetota
Class Thermoleophilia
Order Gaiellales
Family Gaiellaceae
Genus JAICNY01
Species JAICNY01 sp025930955
Assembly information
Completeness (%) 79.44
Contamination (%) 1.73
GC content (%) 73.0
N50 (bp) 6,037
Genome size (bp) 2,209,224

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2288

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1058810_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 6.712e-221 715.0
BYD3_k127_1058810_1 FMN-dependent dehydrogenase K00088 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 438.0
BYD3_k127_1058810_10 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000002744 102.0
BYD3_k127_1058810_11 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.0000000000000000000006199 112.0
BYD3_k127_1058810_12 Sporulation protein YtfJ - - - 0.0000000000438 73.0
BYD3_k127_1058810_13 uracil-dna glycosylase - - - 0.00000001647 67.0
BYD3_k127_1058810_14 PFAM LysM domain - - - 0.000005106 59.0
BYD3_k127_1058810_2 pfkB family carbohydrate kinase K00882 - 2.7.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 315.0
BYD3_k127_1058810_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001797 267.0
BYD3_k127_1058810_4 DNA polymerase III, epsilon subunit K02342 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0016020,GO:0030312,GO:0032991,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071944,GO:1902494,GO:1905347,GO:1905348,GO:1990391 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000001628 234.0
BYD3_k127_1058810_5 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000001504 206.0
BYD3_k127_1058810_6 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000002824 214.0
BYD3_k127_1058810_7 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000246 175.0
BYD3_k127_1058810_8 YCII-related domain K09780 - - 0.0000000000000000000000000000000000000009521 150.0
BYD3_k127_1058810_9 bacterial (prokaryotic) histone like domain - - - 0.000000000000000000000001387 111.0
BYD3_k127_1162172_0 Amylo-alpha-1,6-glucosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 317.0
BYD3_k127_1162172_1 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001252 252.0
BYD3_k127_11738_0 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000007165 254.0
BYD3_k127_11738_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000000000000006207 126.0
BYD3_k127_1202376_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0 1077.0
BYD3_k127_1202376_1 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000000005434 234.0
BYD3_k127_1202376_2 PFAM iron dependent repressor K03709 - - 0.0000000000000000000000000000000000000000286 159.0
BYD3_k127_1258843_0 Xylose isomerase-like TIM barrel K01805 - 5.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000756 222.0
BYD3_k127_1258843_1 myo-inosose-2 dehydratase activity K01805 - 5.3.1.5 0.00000000000000000000000000000000000002265 147.0
BYD3_k127_1258843_2 FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.00000000000000000000000000000003981 130.0
BYD3_k127_1258843_3 Haem-degrading - - - 0.000000001236 70.0
BYD3_k127_1276864_0 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006292 402.0
BYD3_k127_1276864_1 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 - - 0.0000000000000000000000000000002788 126.0
BYD3_k127_1276864_2 - - - - 0.0000000000000000004333 99.0
BYD3_k127_1291250_0 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009191 291.0
BYD3_k127_1291250_1 amine oxidase K06954 - - 0.0000000000000000000000000000000000000000000000007061 197.0
BYD3_k127_1291250_2 Alpha/beta hydrolase family - - - 0.00000000000005654 80.0
BYD3_k127_1303404_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 419.0
BYD3_k127_1303404_1 Metallopeptidase family M24 K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 308.0
BYD3_k127_1303404_10 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000005998 133.0
BYD3_k127_1303404_11 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000002964 105.0
BYD3_k127_1303404_12 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000004616 76.0
BYD3_k127_1303404_13 ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000001248 69.0
BYD3_k127_1303404_2 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007839 249.0
BYD3_k127_1303404_3 Belongs to the universal ribosomal protein uS5 family K02988 - - 0.00000000000000000000000000000000000000000000000000000000000001615 229.0
BYD3_k127_1303404_4 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000000002997 203.0
BYD3_k127_1303404_5 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000002178 169.0
BYD3_k127_1303404_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000005179 169.0
BYD3_k127_1303404_7 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000008793 166.0
BYD3_k127_1303404_8 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000001569 156.0
BYD3_k127_1303404_9 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.0000000000000000000000000000000000007455 161.0
BYD3_k127_1311944_0 COG COG0371 Glycerol dehydrogenase and related enzymes Energy production and conversion K00096 - 1.1.1.261 0.000000000000000000000000000000000000000000000000000000000000000000000000005704 273.0
BYD3_k127_1311944_1 Glycosyltransferase like family 2 K16555 - - 0.00000000000000000000000000000000000009585 161.0
BYD3_k127_1311944_2 CDP-alcohol phosphatidyltransferase - - - 0.0000000000000000001311 99.0
BYD3_k127_1311944_3 transferase - - - 0.0000000000002398 83.0
BYD3_k127_1311944_4 Glycosyltransferase like family 2 K16870 - 2.4.1.289 0.000001046 54.0
BYD3_k127_1317989_0 Cation transport protein K03498 - - 5.073e-199 633.0
BYD3_k127_1317989_1 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000009083 238.0
BYD3_k127_1317989_2 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.000000000000000000000000000000000000000000000000000000001159 213.0
BYD3_k127_1317989_3 Belongs to the peptidase S8 family K17734 - - 0.000000000000000000000000000000000000000000000000002635 203.0
BYD3_k127_1317989_4 Phospholipase/Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000000000000008947 200.0
BYD3_k127_1317989_5 PFAM sodium hydrogen exchanger K03455 - - 0.0004226 45.0
BYD3_k127_1362524_0 Animal haem peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 579.0
BYD3_k127_1362524_1 Belongs to the D-alanine--D-alanine ligase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007187 559.0
BYD3_k127_1362524_10 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000001197 158.0
BYD3_k127_1362524_11 - - - - 0.0000000000000000000000000002905 120.0
BYD3_k127_1362524_12 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000001447 85.0
BYD3_k127_1362524_13 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000002276 65.0
BYD3_k127_1362524_2 Binding-protein-dependent transport systems inner membrane component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003925 480.0
BYD3_k127_1362524_3 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 350.0
BYD3_k127_1362524_4 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 354.0
BYD3_k127_1362524_5 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 342.0
BYD3_k127_1362524_6 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009669 317.0
BYD3_k127_1362524_7 Putative esterase K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000353 286.0
BYD3_k127_1362524_8 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000002119 241.0
BYD3_k127_1362524_9 - - - - 0.00000000000000000000000000000000000000000000000445 179.0
BYD3_k127_1366503_0 (E1) component, eukaryotic type, alpha subunit K21416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006934 295.0
BYD3_k127_1381665_0 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000000003245 230.0
BYD3_k127_1381665_1 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000001454 172.0
BYD3_k127_1381665_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000002609 142.0
BYD3_k127_1381665_3 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000001357 119.0
BYD3_k127_1381665_4 Uracil DNA glycosylase superfamily - - - 0.00000000000000003543 90.0
BYD3_k127_1469609_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000917 372.0
BYD3_k127_1469609_1 Amino acid kinase family K00926 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008804,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019546,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000009144 254.0
BYD3_k127_1469609_2 Rhomboid family - - - 0.00000000000000000000000000000000000000000249 174.0
BYD3_k127_1469609_3 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.000000000000000000000000000000009744 128.0
BYD3_k127_1469609_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000005678 128.0
BYD3_k127_1473138_0 PFAM ABC-3 protein K11709 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008295 455.0
BYD3_k127_1473138_1 ABC 3 transport family K11708 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0010035,GO:0010038,GO:0010043,GO:0016020,GO:0042221,GO:0044464,GO:0050896,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 372.0
BYD3_k127_1479002_0 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 343.0
BYD3_k127_1479002_1 PFAM ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 333.0
BYD3_k127_1479002_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000003773 219.0
BYD3_k127_1495742_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 5.721e-227 716.0
BYD3_k127_1495742_1 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000087 484.0
BYD3_k127_1495742_10 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000001502 253.0
BYD3_k127_1495742_11 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000001138 245.0
BYD3_k127_1495742_12 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000719 240.0
BYD3_k127_1495742_13 Protein of unknown function (DUF3891) - - - 0.0000000000000000000000000000000000000000000000001133 196.0
BYD3_k127_1495742_14 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000001418 189.0
BYD3_k127_1495742_15 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000109 181.0
BYD3_k127_1495742_16 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.00000000000000000000000000000003069 132.0
BYD3_k127_1495742_17 Glutaredoxin K03676 - - 0.0000000000000000000002517 99.0
BYD3_k127_1495742_18 membrane K08972 - - 0.00000000000000176 80.0
BYD3_k127_1495742_19 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000009526 85.0
BYD3_k127_1495742_2 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate K00756 GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009032,GO:0016740,GO:0016757,GO:0016758,GO:0016763,GO:0044424,GO:0044444,GO:0044464 2.4.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 451.0
BYD3_k127_1495742_3 Belongs to the AlaDH PNT family K00259 GO:0000286,GO:0001666,GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009628,GO:0009987,GO:0016020,GO:0016054,GO:0016491,GO:0016638,GO:0019752,GO:0030312,GO:0036293,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0050896,GO:0055114,GO:0070482,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 449.0
BYD3_k127_1495742_4 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 429.0
BYD3_k127_1495742_5 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 411.0
BYD3_k127_1495742_6 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 344.0
BYD3_k127_1495742_7 Peptidase dimerisation domain K01258 - 3.4.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 323.0
BYD3_k127_1495742_8 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003581 305.0
BYD3_k127_1495742_9 Acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571 - 4.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000001401 270.0
BYD3_k127_1503608_0 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 489.0
BYD3_k127_1503608_1 Sigma-70 factor, region 1.2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 364.0
BYD3_k127_1503608_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007224 324.0
BYD3_k127_1503608_3 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 314.0
BYD3_k127_1503608_4 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004581 291.0
BYD3_k127_1503608_5 cellulase activity - - - 0.0000000000000000000000000000000000000000000000382 196.0
BYD3_k127_1503608_6 Glycoside hydrolase K01178 - 3.2.1.3 0.0000008322 52.0
BYD3_k127_1504601_0 DEAD/H associated K03724 - - 0.0 1361.0
BYD3_k127_1504601_1 Domain of unknown function DUF11 - - - 0.0000000000000000000000000009871 130.0
BYD3_k127_1504601_2 Zinc-dependent metalloprotease K01406 - 3.4.24.40 0.00000000000000002636 96.0
BYD3_k127_1504601_3 TIGRFAM outer membrane autotransporter barrel domain - - - 0.000000000000001325 91.0
BYD3_k127_1506817_0 NADH ubiquinone plastoquinone K05568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 531.0
BYD3_k127_1506817_1 PFAM NADH Ubiquinone plastoquinone (complex I) K05565 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009783 272.0
BYD3_k127_1506817_2 Na H antiporter MnhB subunit-related protein K05566 - - 0.00000000000000000000000000000005369 131.0
BYD3_k127_1506817_3 PFAM NADH-ubiquinone oxidoreductase chain 4L K05567 - - 0.00000000000000000000000000001071 129.0
BYD3_k127_1506817_4 Cation antiporter K05569 - - 0.0000255 57.0
BYD3_k127_1523126_0 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000001807 203.0
BYD3_k127_1530511_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004982 329.0
BYD3_k127_1530511_1 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000006787 262.0
BYD3_k127_1530511_2 response regulator receiver K07668,K07775 - - 0.000000000000000000000000000000000000000000000000000000000000000000000128 246.0
BYD3_k127_1530511_3 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000008683 232.0
BYD3_k127_1530511_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000166 188.0
BYD3_k127_1530511_5 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000000000000000000000000004548 138.0
BYD3_k127_1584346_0 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341,K12137 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015672,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0051179,GO:0051234,GO:0055085,GO:0070469,GO:0070470,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1902600,GO:1990204 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 467.0
BYD3_k127_1584346_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 479.0
BYD3_k127_1584346_10 Transmembrane anti-sigma factor - - - 0.00000000000000000008584 91.0
BYD3_k127_1584346_11 Putative zinc-finger - - - 0.0000000000002612 71.0
BYD3_k127_1584346_12 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000006841 75.0
BYD3_k127_1584346_13 cAMP-dependent protein kinase regulator activity K04739 GO:0000003,GO:0000166,GO:0000187,GO:0000226,GO:0000280,GO:0001704,GO:0001707,GO:0001932,GO:0001933,GO:0001934,GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0003006,GO:0003008,GO:0003014,GO:0003091,GO:0003674,GO:0004857,GO:0004860,GO:0004862,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005929,GO:0005952,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006469,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007049,GO:0007143,GO:0007154,GO:0007162,GO:0007163,GO:0007165,GO:0007267,GO:0007268,GO:0007274,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007369,GO:0007389,GO:0007498,GO:0007507,GO:0007591,GO:0007596,GO:0007599,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007635,GO:0008103,GO:0008150,GO:0008152,GO:0008283,GO:0008285,GO:0008306,GO:0008355,GO:0008603,GO:0009611,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009798,GO:0009887,GO:0009888,GO:0009889,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009994,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010562,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010721,GO:0010738,GO:0010927,GO:0010948,GO:0014706,GO:0014855,GO:0015630,GO:0016020,GO:0016043,GO:0016310,GO:0016325,GO:0017076,GO:0019207,GO:0019210,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019932,GO:0019933,GO:0019935,GO:0019953,GO:0021700,GO:0022402,GO:0022407,GO:0022408,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030029,GO:0030036,GO:0030104,GO:0030154,GO:0030155,GO:0030234,GO:0030239,GO:0030291,GO:0030435,GO:0030551,GO:0030552,GO:0030554,GO:0030587,GO:0030951,GO:0030952,GO:0031032,GO:0031154,GO:0031156,GO:0031285,GO:0031288,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031399,GO:0031400,GO:0031401,GO:0031588,GO:0031594,GO:0031625,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032553,GO:0032555,GO:0032559,GO:0032870,GO:0032878,GO:0032944,GO:0032945,GO:0032989,GO:0032991,GO:0033002,GO:0033043,GO:0033673,GO:0033674,GO:0033762,GO:0034199,GO:0034236,GO:0035265,GO:0035556,GO:0036094,GO:0036211,GO:0040007,GO:0040020,GO:0042048,GO:0042060,GO:0042127,GO:0042129,GO:0042130,GO:0042221,GO:0042303,GO:0042325,GO:0042326,GO:0042327,GO:0042493,GO:0042592,GO:0042692,GO:0042802,GO:0042995,GO:0043085,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043434,GO:0043549,GO:0043900,GO:0043901,GO:0043934,GO:0043949,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044853,GO:0045121,GO:0045202,GO:0045214,GO:0045471,GO:0045595,GO:0045596,GO:0045786,GO:0045835,GO:0045859,GO:0045860,GO:0045936,GO:0045937,GO:0046006,GO:0046007,GO:0046677,GO:0048285,GO:0048332,GO:0048468,GO:0048469,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048520,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0048598,GO:0048599,GO:0048609,GO:0048646,GO:0048729,GO:0048731,GO:0048738,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050670,GO:0050672,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050795,GO:0050817,GO:0050863,GO:0050865,GO:0050866,GO:0050868,GO:0050877,GO:0050878,GO:0050890,GO:0050891,GO:0050896,GO:0051018,GO:0051093,GO:0051128,GO:0051129,GO:0051146,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051250,GO:0051252,GO:0051321,GO:0051338,GO:0051347,GO:0051348,GO:0051445,GO:0051447,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0055001,GO:0055002,GO:0055017,GO:0060038,GO:0060255,GO:0060259,GO:0060281,GO:0060283,GO:0060284,GO:0060419,GO:0060537,GO:0061061,GO:0061695,GO:0061939,GO:0065007,GO:0065008,GO:0065009,GO:0070663,GO:0070664,GO:0070887,GO:0070925,GO:0071310,GO:0071375,GO:0071377,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0071900,GO:0071901,GO:0071902,GO:0071944,GO:0072359,GO:0072375,GO:0080090,GO:0090036,GO:0090038,GO:0090702,GO:0097159,GO:0097305,GO:0097367,GO:0097435,GO:0097546,GO:0098589,GO:0098590,GO:0098772,GO:0098805,GO:0098857,GO:0098916,GO:0099120,GO:0099536,GO:0099537,GO:0120025,GO:0120038,GO:0140013,GO:1900193,GO:1900194,GO:1901265,GO:1901363,GO:1901564,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902911,GO:1903037,GO:1903038,GO:1903046,GO:1903429,GO:1903430,GO:1903506,GO:1903538,GO:1905879,GO:1905880,GO:1990234,GO:2000112,GO:2000114,GO:2000241,GO:2000242,GO:2000253,GO:2000479,GO:2000480,GO:2001141 - 0.00000009671 64.0
BYD3_k127_1584346_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 360.0
BYD3_k127_1584346_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 351.0
BYD3_k127_1584346_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 318.0
BYD3_k127_1584346_5 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001814 295.0
BYD3_k127_1584346_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000003887 196.0
BYD3_k127_1584346_7 oxidoreductase - - - 0.0000000000000000000000000000000000000000000004233 188.0
BYD3_k127_1584346_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000006836 109.0
BYD3_k127_1595027_0 Stage II sporulation protein M - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 311.0
BYD3_k127_1595027_1 RDD family - - - 0.000000000000000000000000000000000000000000000000000007981 198.0
BYD3_k127_1595027_2 dihydrofolate reductase activity - - - 0.00000000000000000000000000000000000000000000003708 187.0
BYD3_k127_1595027_3 Zincin-like metallopeptidase - - - 0.000000000000000000000000000000002006 137.0
BYD3_k127_1595027_4 RDD family - - - 0.000000000000000000000000000005724 125.0
BYD3_k127_1595027_5 Rhomboid family - - - 0.00000000000000000000008456 101.0
BYD3_k127_1595027_6 Protein of unknown function (DUF2752) - - - 0.0000000009167 71.0
BYD3_k127_1615589_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004899 331.0
BYD3_k127_1615589_1 serine threonine protein kinase - - - 0.000000000006713 75.0
BYD3_k127_1630665_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004595 474.0
BYD3_k127_1630665_1 Protein of unknown function (DUF4230) - - - 0.00000000000000000000000000000000000000000000001193 180.0
BYD3_k127_1630665_2 Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon K03709 - - 0.000000000000000000000000000000006647 142.0
BYD3_k127_1630665_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000009028 74.0
BYD3_k127_1632408_0 abc transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 338.0
BYD3_k127_1632408_1 Family of unknown function (DUF1028) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 331.0
BYD3_k127_1632408_2 Involved in multi-copper enzyme maturation, permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006915 267.0
BYD3_k127_1632408_3 Belongs to the UPF0173 family - - - 0.000000000000000000000000000000000000000000000000000000000000000001939 236.0
BYD3_k127_1632408_4 UDP-N-acetylglucosamine 2-epimerase activity K01791,K13019 - 5.1.3.14,5.1.3.23 0.00000000000000000000000000000000000000000000000000000000003124 210.0
BYD3_k127_1632408_5 Belongs to the LDH2 MDH2 oxidoreductase family K16844 - 1.1.1.338 0.00000288 60.0
BYD3_k127_1635150_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 403.0
BYD3_k127_1635150_1 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000004837 217.0
BYD3_k127_1635150_2 L-asparaginase II - - - 0.000000000000000000000000000000000000000000000000000227 200.0
BYD3_k127_1638723_0 TIGRFAM methylmalonyl-CoA mutase N-terminal domain K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 479.0
BYD3_k127_1638723_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006418 428.0
BYD3_k127_1638723_2 Low temperature requirement - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 298.0
BYD3_k127_1638723_3 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000001249 216.0
BYD3_k127_1641146_0 Domain of unknown function (DUF1998) K06877 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 350.0
BYD3_k127_1641146_1 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000005159 248.0
BYD3_k127_1641146_2 cytochrome - - - 0.0000000000000000000000000000000000000000003391 165.0
BYD3_k127_1641146_3 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000001071 173.0
BYD3_k127_1641146_4 Alpha beta hydrolase - - - 0.0000000000000000000000000002478 117.0
BYD3_k127_1676237_0 Protein of unknown function (DUF3891) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007057 297.0
BYD3_k127_1676237_1 Isochorismatase family - - - 0.00000000000000000000000000000000000000000003084 163.0
BYD3_k127_1676237_2 Serine aminopeptidase, S33 - - - 0.000000000000000000001496 101.0
BYD3_k127_1711322_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 507.0
BYD3_k127_1711322_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 377.0
BYD3_k127_1711322_2 Methionine synthase K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000004898 213.0
BYD3_k127_1711322_3 Cell envelope-related transcriptional attenuator domain - - - 0.00000000000000000000000000000000000000000008091 182.0
BYD3_k127_1711322_4 Nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000641 171.0
BYD3_k127_1711322_5 Mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000001242 142.0
BYD3_k127_1719992_0 Squalene-hopene cyclase N-terminal domain K06045 - 4.2.1.129,5.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 393.0
BYD3_k127_1719992_1 PFAM amine oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004899 278.0
BYD3_k127_1719992_2 Squalene/phytoene synthase K02291 GO:0003674,GO:0003824,GO:0004337,GO:0004659,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016740,GO:0016765,GO:0016767,GO:0042440,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046148,GO:0071704,GO:1901576 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000005605 164.0
BYD3_k127_1756158_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005319 327.0
BYD3_k127_1756158_1 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004546 254.0
BYD3_k127_1756158_2 FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.000000000000000000000000000000000000000000001462 168.0
BYD3_k127_1756158_3 PFAM oxidoreductase domain protein - - - 0.000000000000000000000000000002345 120.0
BYD3_k127_1780874_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 3.475e-210 673.0
BYD3_k127_1780874_1 Catalyzes the conversion of dihydroorotate to orotate K00254,K17828 - 1.3.1.14,1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000559 232.0
BYD3_k127_1780874_2 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain K02823 - - 0.00000000000000000000000000000000000002613 158.0
BYD3_k127_1782603_0 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 547.0
BYD3_k127_1782603_1 Peptidase M1, membrane alanine aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 455.0
BYD3_k127_1782603_2 Cleaves the N-terminal amino acid of tripeptides K01258 GO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0034641,GO:0034701,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045148,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.11.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 417.0
BYD3_k127_1782603_4 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000000000000000000000000000000000000000005333 230.0
BYD3_k127_1782603_5 Cbs domain - - - 0.0000000000000000000000000000000000000000001316 183.0
BYD3_k127_1782603_6 PFAM DsrC family protein K11179 - - 0.000000000000000000000000000000000003672 139.0
BYD3_k127_1782603_7 PFAM Integral membrane protein TerC K05794 - - 0.0000000000000000000000000001649 117.0
BYD3_k127_1782603_8 - - - - 0.0000000000000001611 83.0
BYD3_k127_1782603_9 - - - - 0.0000000000001646 85.0
BYD3_k127_1789826_0 Glutamate-cysteine ligase family 2(GCS2) K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006013 336.0
BYD3_k127_1789826_1 PSP1 domain protein - - - 0.0000000000000000000000000000000000000000000006705 181.0
BYD3_k127_1789826_2 - - - - 0.000000000000000000001839 96.0
BYD3_k127_1789826_3 DNA polymerase III, delta K02341 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0003691 48.0
BYD3_k127_1890155_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 516.0
BYD3_k127_1890155_1 Belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 302.0
BYD3_k127_1890155_2 peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000000000000000000000000009244 242.0
BYD3_k127_1897083_0 PFAM FAD dependent oxidoreductase K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007988 345.0
BYD3_k127_1897083_1 epimerase dehydratase K00091 - 1.1.1.219 0.000000000000000000000000000000000000000001946 174.0
BYD3_k127_1897083_2 Cupin domain - - - 0.0000000000005073 72.0
BYD3_k127_1897083_3 - - - - 0.0004827 43.0
BYD3_k127_1938456_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009564 389.0
BYD3_k127_1938456_1 pyridine nucleotide-disulphide oxidoreductase K00529,K05301,K17229 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.18.1.3,1.8.2.1,1.8.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000005452 270.0
BYD3_k127_1938456_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000005415 231.0
BYD3_k127_1938456_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000001705 233.0
BYD3_k127_1938456_4 Domain of Unknown Function (DUF1206) - - - 0.00000000000000000000000000000000000000000000000000002113 206.0
BYD3_k127_1938456_5 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000007154 113.0
BYD3_k127_1938456_6 NAD dependent epimerase dehydratase family protein K00059 - 1.1.1.100 0.00000000000000000001436 92.0
BYD3_k127_1938456_7 Cytochrome c K05301 - 1.8.2.1 0.000000000001737 74.0
BYD3_k127_1938456_8 - - - - 0.000000000002489 71.0
BYD3_k127_1950274_0 Aminotransferase, class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 364.0
BYD3_k127_1950274_1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000003395 263.0
BYD3_k127_1950274_2 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000004715 117.0
BYD3_k127_1950274_3 Polysaccharide deacetylase - - - 0.00000000005939 74.0
BYD3_k127_1950274_4 - - - - 0.00003701 54.0
BYD3_k127_1950473_0 Alcohol dehydrogenase GroES-like domain - - - 5.883e-197 627.0
BYD3_k127_1950473_1 HRDC domain K03657 GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0006996,GO:0008094,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0040007,GO:0042623,GO:0043167,GO:0043169,GO:0046872,GO:0051276,GO:0071103,GO:0071840,GO:0140097 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 430.0
BYD3_k127_1950473_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 299.0
BYD3_k127_1950473_3 cyclase dehydrase - - - 0.0000000000000000000000000000000000000000000000000000000003374 208.0
BYD3_k127_1950473_4 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000009724 121.0
BYD3_k127_1954781_0 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 567.0
BYD3_k127_1954781_1 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 333.0
BYD3_k127_1964093_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 598.0
BYD3_k127_1964093_1 Dak1_2 K07030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008375 351.0
BYD3_k127_1964093_10 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000001085 91.0
BYD3_k127_1964093_11 cheY-homologous receiver domain - - - 0.000000000000000006759 98.0
BYD3_k127_1964093_12 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000004809 71.0
BYD3_k127_1964093_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 298.0
BYD3_k127_1964093_3 Riboflavin biosynthesis protein RibD K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000585 297.0
BYD3_k127_1964093_4 16S rRNA methyltransferase RsmB/F K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001759 289.0
BYD3_k127_1964093_5 DegV family - - - 0.0000000000000000000000000000000000000000000000000000002346 205.0
BYD3_k127_1964093_6 riboflavin synthase, alpha K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000002482 184.0
BYD3_k127_1964093_7 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.00000000000000000000000000000000000000001206 174.0
BYD3_k127_1964093_8 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000000000000000000000000000000000000366 156.0
BYD3_k127_1964093_9 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000773 158.0
BYD3_k127_1990428_0 Domain of unknown function (DUF1998) K06877 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 514.0
BYD3_k127_1990428_1 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 461.0
BYD3_k127_1990428_2 belongs to the sigma-70 factor family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005089 443.0
BYD3_k127_1990428_3 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003147 414.0
BYD3_k127_1990428_4 Fungalysin metallopeptidase (M36) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 353.0
BYD3_k127_1990428_5 YCII-related domain - - - 0.000000000000000000000000003351 116.0
BYD3_k127_1990428_6 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000001707 126.0
BYD3_k127_1990428_7 YCII-related domain - - - 0.00000000000000000000004486 104.0
BYD3_k127_2002327_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1114.0
BYD3_k127_2002327_1 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000429 242.0
BYD3_k127_2002327_2 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000000000000000003465 144.0
BYD3_k127_2002327_3 PFAM Rhomboid family - - - 0.000000000000000000000000000000007169 134.0
BYD3_k127_2002327_4 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000008618 75.0
BYD3_k127_2058893_0 PFAM bifunctional deaminase-reductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001664 272.0
BYD3_k127_2058893_1 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007617 266.0
BYD3_k127_2058893_2 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000001509 243.0
BYD3_k127_2058893_3 PFAM glycosyl transferase, family 51 K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000629 232.0
BYD3_k127_2058893_4 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.00000000000000000000000000000000000000000000000000000001326 216.0
BYD3_k127_2058893_5 MoaE protein K21142 - 2.8.1.12 0.000000000000000000000000000000000000000000000000581 188.0
BYD3_k127_2058893_6 - - - - 0.00000000072 70.0
BYD3_k127_2070151_0 protein involved in exopolysaccharide biosynthesis - - - 1.543e-199 656.0
BYD3_k127_2070151_1 myo-inosose-2 dehydratase activity K01805 - 5.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006608 414.0
BYD3_k127_2070151_2 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 300.0
BYD3_k127_2071734_0 MMPL family - - - 1.13e-217 700.0
BYD3_k127_2071734_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002827 369.0
BYD3_k127_2071734_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000003391 248.0
BYD3_k127_2071734_4 drug exporters of the RND superfamily K06994,K20470 - - 0.0000000000009565 69.0
BYD3_k127_2096033_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 8.728e-309 955.0
BYD3_k127_2109375_0 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K01488 GO:0003674,GO:0003824,GO:0004000,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006144,GO:0006152,GO:0006154,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009113,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009156,GO:0009161,GO:0009163,GO:0009164,GO:0009165,GO:0009167,GO:0009168,GO:0009987,GO:0015949,GO:0015950,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0032261,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042440,GO:0042451,GO:0042454,GO:0042455,GO:0042737,GO:0043094,GO:0043096,GO:0043101,GO:0043103,GO:0043173,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046100,GO:0046101,GO:0046102,GO:0046103,GO:0046112,GO:0046128,GO:0046129,GO:0046130,GO:0046148,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 3.5.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000012 287.0
BYD3_k127_2109375_1 Glycosyl transferases group 1 K08256 - 2.4.1.345 0.000000000000000000000000000000000000000000000000000000000000000000000001088 259.0
BYD3_k127_2156007_0 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 355.0
BYD3_k127_2156007_1 Multicopper oxidase K00368 - 1.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 327.0
BYD3_k127_2156007_2 Cbs domain - - - 0.000000000000001152 85.0
BYD3_k127_2218899_0 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000001008 221.0
BYD3_k127_2218899_1 pfkB family carbohydrate kinase K00852 - 2.7.1.15 0.00000000000000000000000000000000000000000000000000000007547 208.0
BYD3_k127_2218899_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000000001731 184.0
BYD3_k127_2218899_3 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000000000008049 141.0
BYD3_k127_2218899_4 Sigma-70 region 2 - - - 0.00000000008673 70.0
BYD3_k127_2278061_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 499.0
BYD3_k127_2278061_1 Multicopper oxidase K00368 - 1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000404 268.0
BYD3_k127_2278061_2 Transcriptional regulator - - - 0.0000000000000000000000000000000003933 145.0
BYD3_k127_2278061_3 Fibronectin type III domain - - - 0.000000000000000001879 97.0
BYD3_k127_2278061_4 - - - - 0.000000000000000004807 98.0
BYD3_k127_2283241_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 1.838e-238 746.0
BYD3_k127_2283241_1 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 406.0
BYD3_k127_2283241_2 glyoxalase III activity - - - 0.0000000000000000000000000000000000000000000000000000007097 199.0
BYD3_k127_2283241_3 Oligoendopeptidase f K01283,K08602 - 3.4.15.1 0.0000000000000000000000000000000000129 141.0
BYD3_k127_2283241_5 heat shock protein binding K03686,K04082 - - 0.0003385 50.0
BYD3_k127_2302462_0 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000005863 250.0
BYD3_k127_2302462_1 Belongs to the FPP GGPP synthase family - - - 0.00000000000000000000000000000000000000000000000000000000000005247 226.0
BYD3_k127_2302462_2 Cytochrome b K03887 - - 0.00000000000000000000000000000000000000000000000000000003554 200.0
BYD3_k127_2302462_3 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000002619 194.0
BYD3_k127_2302462_4 Cytochrome b subunit of the bc K03888 - - 0.0000000000000000000000000000000000000000949 160.0
BYD3_k127_2302462_5 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.00000000000000000000000005554 118.0
BYD3_k127_2311422_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007457 377.0
BYD3_k127_2311422_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 370.0
BYD3_k127_2311422_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000004496 183.0
BYD3_k127_2332712_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 5.975e-263 831.0
BYD3_k127_2332712_1 Evidence 2b Function of strongly homologous gene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 330.0
BYD3_k127_2332712_2 LexA DNA binding domain K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000007719 251.0
BYD3_k127_2332712_3 - - - - 0.00001154 57.0
BYD3_k127_2340575_0 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 373.0
BYD3_k127_2340575_1 YceI-like domain - - - 0.0000000000000000000000001515 113.0
BYD3_k127_2359987_0 MMPL family - - - 3.614e-231 769.0
BYD3_k127_2359987_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 352.0
BYD3_k127_2359987_2 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 323.0
BYD3_k127_2359987_3 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 336.0
BYD3_k127_2359987_4 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 290.0
BYD3_k127_2359987_5 DinB family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001739 280.0
BYD3_k127_2359987_6 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000001003 233.0
BYD3_k127_2359987_7 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000003649 160.0
BYD3_k127_2359987_8 WD40-like Beta Propeller Repeat K03641,K08676 - - 0.000000000000000000000000000000001124 152.0
BYD3_k127_2359987_9 ABC-2 family transporter protein - - - 0.00005636 56.0
BYD3_k127_2400746_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009693 392.0
BYD3_k127_2400746_1 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002353 268.0
BYD3_k127_2400746_2 Pfam Response regulator receiver K07689 - - 0.00000000000000000000000000000000264 139.0
BYD3_k127_2400746_3 Phospholipase_D-nuclease N-terminal - - - 0.00000000000000000000000000002448 122.0
BYD3_k127_2402754_0 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000002874 161.0
BYD3_k127_2414235_0 SMART alpha amylase catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 323.0
BYD3_k127_2414235_1 bifunctional deaminase-reductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000787 232.0
BYD3_k127_2447691_0 Flavin containing amine oxidoreductase K00274,K03343 - 1.4.3.10,1.4.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 434.0
BYD3_k127_2447691_1 PFAM Type II secretion system protein E K02283 - - 0.0000000000000000000000000000000000000000000000000000000000005455 214.0
BYD3_k127_2447691_2 Type II secretion system (T2SS), protein F K12510 - - 0.000000000000000000000000000000000000000000000000001258 208.0
BYD3_k127_2447691_3 PFAM type II secretion system K12511 - - 0.000000000000000000000000000000000000000000000000103 189.0
BYD3_k127_2447691_4 Lysine methyltransferase - - - 0.0000000000000000000000000000000000000000000001408 177.0
BYD3_k127_2447691_5 Domain of unknown function (DUF4328) - - - 0.000000000000000000001665 109.0
BYD3_k127_2447691_6 protein histidine kinase activity - - - 0.000000000000000000558 98.0
BYD3_k127_2447691_7 Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.000002024 59.0
BYD3_k127_2481116_0 homoserine dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 592.0
BYD3_k127_2481116_1 Nucleotidyl transferase K00978 - 2.7.7.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000001503 259.0
BYD3_k127_2499960_0 protein methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007866 449.0
BYD3_k127_2499960_1 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002804 282.0
BYD3_k127_2499960_2 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004695 286.0
BYD3_k127_2499960_3 - - - - 0.00000004569 57.0
BYD3_k127_2516137_0 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000006836 243.0
BYD3_k127_2516137_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000001055 217.0
BYD3_k127_2516137_2 - - - - 0.000000000000000000000000000000000000000000005876 182.0
BYD3_k127_2516137_3 GtrA-like protein - - - 0.00000000000000000000000000138 130.0
BYD3_k127_2577475_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 370.0
BYD3_k127_2577475_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000009822 197.0
BYD3_k127_2598522_0 ABC transporter, ATP-binding protein K02028 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 308.0
BYD3_k127_2598522_1 Belongs to the bacterial solute-binding protein 3 family K02030 - - 0.00000000000000000000000000000000000000000005073 169.0
BYD3_k127_2598522_2 Amino acid ABC transporter, permease protein, 3-TM K02029 - - 0.000000000000000000000000000000000000000003326 169.0
BYD3_k127_2598522_3 Telomere recombination K07566 GO:0000049,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 2.7.7.87 0.00007396 54.0
BYD3_k127_2624561_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 412.0
BYD3_k127_2624561_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000001445 220.0
BYD3_k127_2624561_2 protein conserved in bacteria K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000004323 190.0
BYD3_k127_2624561_3 Ribosomal protein L20 K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016020,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0071944,GO:1990904 - 0.0000000000000000000000000000000000001082 148.0
BYD3_k127_2624561_4 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000002035 70.0
BYD3_k127_2626621_0 Seryl-tRNA synthetase N-terminal domain K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005706 495.0
BYD3_k127_2626621_1 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009705 315.0
BYD3_k127_2626621_2 Haemolysin-type calcium-binding repeat (2 copies) K01406,K07004 - 3.4.24.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 306.0
BYD3_k127_2626621_3 HAD-superfamily hydrolase, subfamily IIB - - - 0.0000000000000000000000000000000000000000000000000000000471 211.0
BYD3_k127_2626621_4 - - - - 0.0000000000000000000000000000000000000000000001076 175.0
BYD3_k127_2626621_5 Cytochrome C oxidase, cbb3-type, subunit III K05301 - 1.8.2.1 0.00000000007159 75.0
BYD3_k127_2630025_0 Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 300.0
BYD3_k127_2630025_1 Carbon-nitrogen hydrolase K01501 - 3.5.5.1 0.0000000000000000000000000000000000000000000000108 177.0
BYD3_k127_2630025_2 Thioredoxin - - - 0.0000000000000000000001988 104.0
BYD3_k127_2658839_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002248 286.0
BYD3_k127_2658839_1 Bacterial transcriptional activator domain - - - 0.0000000000000000000000000000000000000000000000000000000000000005459 228.0
BYD3_k127_2658839_2 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) - - - 0.00000000000000000000000000000000000000000000000000000001481 207.0
BYD3_k127_2658839_3 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000001202 196.0
BYD3_k127_2658839_4 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000001754 188.0
BYD3_k127_2658839_5 Conserved hypothetical protein 95 - - - 0.000000000000000000000000000000000000000000003336 173.0
BYD3_k127_2658839_6 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000000000000005349 139.0
BYD3_k127_2658839_7 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000001683 95.0
BYD3_k127_2658839_8 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000001925 96.0
BYD3_k127_2658839_9 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000001232 73.0
BYD3_k127_2662905_0 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 392.0
BYD3_k127_2662905_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003852 289.0
BYD3_k127_2662905_2 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000001226 199.0
BYD3_k127_2662905_3 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000002657 156.0
BYD3_k127_2766603_0 metallopeptidase activity K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 397.0
BYD3_k127_2766603_1 peptidase U62, modulator of DNA gyrase - - - 0.000000002949 68.0
BYD3_k127_2771057_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004404 246.0
BYD3_k127_2771057_1 Response regulator receiver K02479 - - 0.00000000000000000000000000000000000000000000000000000572 213.0
BYD3_k127_2771057_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000104 83.0
BYD3_k127_2839020_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 389.0
BYD3_k127_2839020_1 AP endonuclease family 2 K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000005217 264.0
BYD3_k127_2839020_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000001447 75.0
BYD3_k127_2839020_3 Lysylphosphatidylglycerol synthase TM region - - - 0.0000004075 55.0
BYD3_k127_2839020_4 N-acetylmuramidase - - - 0.00003186 46.0
BYD3_k127_2854692_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370 - 1.7.5.1 0.0 1890.0
BYD3_k127_2854692_1 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 426.0
BYD3_k127_2854692_2 Major Facilitator Superfamily K02575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 365.0
BYD3_k127_2854692_3 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000001407 257.0
BYD3_k127_2854692_4 DNA-templated transcription, initiation - - - 0.000000000000000000000000000000000000000000000000000000009762 218.0
BYD3_k127_2854692_5 LysM domain - - - 0.000000000000000000000000000000000000000000000008072 185.0
BYD3_k127_2854692_7 4Fe-4S dicluster domain K00371 - 1.7.5.1 0.0000000000000000427 97.0
BYD3_k127_2854692_8 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000006462 68.0
BYD3_k127_2855325_0 Carbamoyl-phosphate synthetase large chain domain protein K11263 - 6.3.4.14,6.4.1.2,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006284 474.0
BYD3_k127_2855325_1 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001965 274.0
BYD3_k127_2855325_2 NlpC/P60 family - - - 0.0000000000000000000000000000000000000000000000002228 190.0
BYD3_k127_2855325_3 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000001335 116.0
BYD3_k127_2855325_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.5 0.000000000000000000000004343 111.0
BYD3_k127_2855325_5 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.00004163 55.0
BYD3_k127_2870485_0 translation initiation factor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008986 310.0
BYD3_k127_2870485_1 TIGRFAM geranylgeranyl reductase family - - - 0.000000000000000004227 95.0
BYD3_k127_2910040_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 580.0
BYD3_k127_2910718_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 509.0
BYD3_k127_2910718_1 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 287.0
BYD3_k127_2925763_0 glycosyl transferase, family 51 K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 471.0
BYD3_k127_2925763_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 398.0
BYD3_k127_2925763_2 Methylpurine-DNA glycosylase (MPG) K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000002716 172.0
BYD3_k127_2925763_3 - - - - 0.0000000000000000000000165 102.0
BYD3_k127_2925763_4 - - - - 0.000000000000002288 78.0
BYD3_k127_2958898_0 56kDa selenium binding protein (SBP56) K17285 - - 2.758e-228 715.0
BYD3_k127_2958898_1 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556 390.0
BYD3_k127_2958898_2 Daunorubicin resistance ABC transporter ATP-binding subunit K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394 292.0
BYD3_k127_2958898_3 - - - - 0.00000000000000000000000000000000000000000000000000000002837 207.0
BYD3_k127_2958898_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000008896 216.0
BYD3_k127_2958898_5 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000002703 125.0
BYD3_k127_2965869_0 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 355.0
BYD3_k127_2965869_1 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000002542 156.0
BYD3_k127_2965869_2 - - - - 0.000000000000000000000000001343 119.0
BYD3_k127_2965869_3 Helix-turn-helix domain - - - 0.00000001375 63.0
BYD3_k127_2965869_4 translation initiation factor activity K06996 - - 0.000002525 49.0
BYD3_k127_2971979_0 Uncharacterised protein family (UPF0261) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 453.0
BYD3_k127_2971979_1 Phosphoenolpyruvate hydrolase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 465.0
BYD3_k127_2971979_2 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 412.0
BYD3_k127_2971979_3 Uncharacterised protein family (UPF0261) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 421.0
BYD3_k127_2971979_4 FAD linked oxidases, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007922 410.0
BYD3_k127_2971979_5 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 324.0
BYD3_k127_2971979_6 transcriptional regulator DeoR family K02081,K03436 - - 0.000000000000000000000000000002269 130.0
BYD3_k127_2971979_7 AP endonuclease family 2 C terminus - - - 0.000000000000000000000004718 112.0
BYD3_k127_2971979_8 Cupin - - - 0.0000000000000000000002733 108.0
BYD3_k127_2984986_0 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004601 247.0
BYD3_k127_2984986_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000277 249.0
BYD3_k127_2984986_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000007101 63.0
BYD3_k127_2986516_0 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 618.0
BYD3_k127_2986516_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 312.0
BYD3_k127_2986516_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000001491 257.0
BYD3_k127_2986516_3 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000001084 188.0
BYD3_k127_2986516_4 Arginase family K01476 - 3.5.3.1 0.00000000000000000000000000005688 126.0
BYD3_k127_2986516_5 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000001121 115.0
BYD3_k127_2988613_0 Band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 318.0
BYD3_k127_2988613_1 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 325.0
BYD3_k127_2988613_2 PFAM Galactose-1-phosphate uridyl transferase K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000006126 193.0
BYD3_k127_2988613_3 protein potentially involved in peptidoglycan biosynthesis - - - 0.0000000000000002838 94.0
BYD3_k127_2990604_0 TIGRFAM daunorubicin resistance ABC transporter ATPase subunit K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 399.0
BYD3_k127_2990604_1 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 349.0
BYD3_k127_2990604_2 ABC-2 family transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 342.0
BYD3_k127_2990604_3 Copper resistance protein D K14166 - - 0.00000000000000000000000000000000000000000000000000000004651 217.0
BYD3_k127_2990604_4 Domain of unkown function (DUF1775) - - - 0.0000000000000000000000000000000001024 141.0
BYD3_k127_3010874_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 3.581e-296 917.0
BYD3_k127_3010874_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000003797 95.0
BYD3_k127_3010874_2 AbrB family transcriptional regulator K06284 GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0042802,GO:0043937,GO:0050789,GO:0050793,GO:0065007 - 0.0000000000000000001741 93.0
BYD3_k127_3010874_3 TatD related DNase K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.000004215 60.0
BYD3_k127_3013413_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 379.0
BYD3_k127_3013413_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000009446 243.0
BYD3_k127_3013413_2 cheY-homologous receiver domain - - - 0.0000000000000000000000000002157 119.0
BYD3_k127_3013413_3 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000001591 121.0
BYD3_k127_3013413_4 Involved in the tonB-independent uptake of proteins - - - 0.0000000000001793 81.0
BYD3_k127_3021179_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 327.0
BYD3_k127_3021179_1 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006498 313.0
BYD3_k127_3021179_2 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000005082 225.0
BYD3_k127_3021179_3 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000001216 131.0
BYD3_k127_3027091_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000006484 242.0
BYD3_k127_3027091_1 EamA-like transporter family K03298 - - 0.00000000000000000000000000000000000000000000000000004059 203.0
BYD3_k127_3027091_2 Uncharacterized conserved protein (DUF2304) - - - 0.00000000000000000001136 105.0
BYD3_k127_3058216_0 Aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 2.33e-221 715.0
BYD3_k127_3058216_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 510.0
BYD3_k127_3058216_10 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000004175 221.0
BYD3_k127_3058216_11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000001152 164.0
BYD3_k127_3058216_12 May be required for sporulation K09762 - - 0.0000000000000000000000000000000000002024 158.0
BYD3_k127_3058216_13 ECF sigma factor K03088 - - 0.00000000000000000000000000002562 124.0
BYD3_k127_3058216_14 COG0350 Methylated DNA-protein cysteine methyltransferase K00567 - 2.1.1.63 0.00000000000000000002266 107.0
BYD3_k127_3058216_15 permeases of the drug metabolite transporter (Dmt) superfamily K03298 - - 0.0000000000000009008 88.0
BYD3_k127_3058216_2 Glyceraldehyde-3-phosphate dehydrogenase, type I K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 443.0
BYD3_k127_3058216_3 Belongs to the class I fructose-bisphosphate aldolase family K01623 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 425.0
BYD3_k127_3058216_4 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030145,GO:0030388,GO:0042132,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0046914,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 396.0
BYD3_k127_3058216_5 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008526 407.0
BYD3_k127_3058216_6 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004058 389.0
BYD3_k127_3058216_7 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000002054 242.0
BYD3_k127_3058216_8 PFAM Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000977 231.0
BYD3_k127_3058216_9 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000001083 217.0
BYD3_k127_3083166_0 ATP-grasp - - - 0.000000000000000000000000000712 121.0
BYD3_k127_3090362_0 Belongs to the ABC transporter superfamily K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008888 559.0
BYD3_k127_3090362_1 Isocitrate/isopropylmalate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 503.0
BYD3_k127_3090362_2 Bacterial extracellular solute-binding protein K10232 - - 0.000000000000000000000000000000000009269 151.0
BYD3_k127_3090362_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K05524 - - 0.000000000000000000000000000002044 122.0
BYD3_k127_3094960_0 acyl-CoA dehydrogenase activity K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005122 463.0
BYD3_k127_3094960_1 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000578 406.0
BYD3_k127_3094960_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000002507 206.0
BYD3_k127_3094960_3 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP - - - 0.00000000000000000000000000000001853 143.0
BYD3_k127_3133443_0 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008028 265.0
BYD3_k127_3133443_1 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000004921 248.0
BYD3_k127_3133443_2 Sugar transferases involved in lipopolysaccharide synthesis - - - 0.00000000000000000000000000000000000000000000000000000000000775 226.0
BYD3_k127_3133443_3 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000005661 144.0
BYD3_k127_3133443_4 ATP-grasp - - - 0.000000000000000000000000000000001357 151.0
BYD3_k127_3133443_5 Glycosyltransferase family 87 - - - 0.00008835 54.0
BYD3_k127_3138045_0 Creatinase Prolidase N-terminal domain K01262,K01271 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0016787,GO:0019538,GO:0030145,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.11.9,3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000002413 263.0
BYD3_k127_3138045_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000001434 231.0
BYD3_k127_3138045_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000001467 218.0
BYD3_k127_3138045_3 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000007453 172.0
BYD3_k127_3138045_4 Oxaloacetate K01960 - 6.4.1.1 0.0000000000000000000000000009785 116.0
BYD3_k127_315121_0 Type I GTP cyclohydrolase folE2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007619 325.0
BYD3_k127_315121_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000009494 256.0
BYD3_k127_315121_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 GO:0000166,GO:0003674,GO:0003824,GO:0004799,GO:0005488,GO:0008150,GO:0008152,GO:0008168,GO:0016740,GO:0016741,GO:0032259,GO:0036094,GO:0040007,GO:0042083,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050797,GO:0070402,GO:0097159,GO:1901265,GO:1901363 2.1.1.148 0.000000000000000000000000000000000000000000000000000003418 196.0
BYD3_k127_315121_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000005644 155.0
BYD3_k127_315121_4 PFAM short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.00000000000000000000000000000000000003271 153.0
BYD3_k127_315121_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000007057 132.0
BYD3_k127_315121_6 Cupin domain - - - 0.000000000000000000000000000000109 126.0
BYD3_k127_315121_7 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02484 - 2.7.13.3 0.000000004738 68.0
BYD3_k127_315121_8 - - - - 0.0000001281 62.0
BYD3_k127_3195314_0 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 3.216e-195 644.0
BYD3_k127_3195314_1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 303.0
BYD3_k127_3195314_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002366 291.0
BYD3_k127_3195314_3 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000004217 169.0
BYD3_k127_3199075_0 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 435.0
BYD3_k127_3199075_1 Type IV pilus assembly protein PilM; K02662 - - 0.000000000000000000000000000000000000000000000007412 192.0
BYD3_k127_3199075_2 Cell motility and secretion Intracellular trafficking and secretion - - - 0.0000000006494 66.0
BYD3_k127_3229432_0 Myo-inositol-1-phosphate synthase K01858 GO:0003674,GO:0003824,GO:0004512,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009405,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016853,GO:0016872,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044272,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 364.0
BYD3_k127_3229432_1 PAP2 superfamily - - - 0.00000000000000000000000000000001607 134.0
BYD3_k127_3229432_2 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000769 126.0
BYD3_k127_3232625_0 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000004335 174.0
BYD3_k127_3232625_1 WbqC-like protein family - - - 0.000000000000000000000000179 121.0
BYD3_k127_3248825_0 His Kinase A (phosphoacceptor) domain K07654 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 400.0
BYD3_k127_3248825_1 Sporulation and spore germination - - - 0.00000000000000000000000000000000000000000000000000001185 204.0
BYD3_k127_3248825_2 Transcriptional regulatory protein, C terminal - - - 0.000000000000003989 75.0
BYD3_k127_3249140_0 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 373.0
BYD3_k127_3249140_1 synthase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 331.0
BYD3_k127_3249140_2 endonuclease III K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000326 251.0
BYD3_k127_3249140_3 Protein of unknown function (DUF1295) - - - 0.00000000000000000000000000000000000000000000000000000000001306 230.0
BYD3_k127_3249140_4 amine oxidase K06954 - - 0.00000000000000000000000000000000000000000000000000002464 193.0
BYD3_k127_3249140_5 Protein of unknown function (DUF1365) K09701 - - 0.000000000000000000000000000000000000000000000000213 192.0
BYD3_k127_3249140_6 growth of symbiont in host cell K07003 - - 0.0001857 54.0
BYD3_k127_3261520_0 Hexapeptide repeat of succinyl-transferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000001165 235.0
BYD3_k127_3261520_1 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000002592 191.0
BYD3_k127_3261520_2 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.000000000000000000000000000000000000000000142 178.0
BYD3_k127_3263450_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000272 258.0
BYD3_k127_3263450_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000002957 220.0
BYD3_k127_3263450_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000001674 190.0
BYD3_k127_3263450_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000004833 196.0
BYD3_k127_3263450_4 Cupin - - - 0.0000000000000000000000005419 122.0
BYD3_k127_3263450_5 Cupin domain - - - 0.0000000000002177 84.0
BYD3_k127_3266001_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 432.0
BYD3_k127_3266001_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 394.0
BYD3_k127_3266001_10 CBS domain - - - 0.0001241 55.0
BYD3_k127_3266001_2 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 361.0
BYD3_k127_3266001_3 Carbon-nitrogen hydrolase K01501 - 3.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001853 287.0
BYD3_k127_3266001_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000003785 216.0
BYD3_k127_3266001_5 permease, DMT superfamily K11939 - - 0.0000000000000000000000000000000000000000000000004562 178.0
BYD3_k127_3266001_6 transcription factor binding - - - 0.00000000000000000000000000000000000000001623 157.0
BYD3_k127_3266001_7 translation release factor activity K03265 - - 0.0000000000000000000000002604 119.0
BYD3_k127_3266001_8 Protein of unknown function (DUF3105) - - - 0.00000000000000002734 91.0
BYD3_k127_3266001_9 NfeD-like C-terminal, partner-binding K07403 - - 0.000000001039 63.0
BYD3_k127_3272237_0 xanthine dehydrogenase, a b hammerhead - - - 1.953e-270 862.0
BYD3_k127_3272237_1 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 310.0
BYD3_k127_3272237_2 Enoyl-CoA hydratase K07539,K18570 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016822,GO:0016823,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901787,GO:1901788 3.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001115 292.0
BYD3_k127_3272237_3 Enoyl-CoA hydratase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000112 241.0
BYD3_k127_3272237_4 Predicted membrane protein (DUF2339) - - - 0.0000000000000000000000000000000000000000000000001449 197.0
BYD3_k127_3272237_5 CO dehydrogenase flavoprotein C-terminal domain - - - 0.0000000000000000000000000002931 117.0
BYD3_k127_3272237_6 Putative inner membrane exporter, YdcZ K09936 - - 0.00000000000001138 82.0
BYD3_k127_3272237_7 sequence-specific DNA binding - - - 0.00000000000004535 83.0
BYD3_k127_332117_0 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000005678 261.0
BYD3_k127_332117_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000005107 175.0
BYD3_k127_332117_2 Belongs to the carbohydrate kinase PfkB family - - - 0.00000000000000000000000000000000000000001746 166.0
BYD3_k127_332117_3 cell envelope-related transcriptional attenuator - - - 0.0000000000000000000000000000000000000008414 165.0
BYD3_k127_332117_4 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.00000000000000000000000000000001757 141.0
BYD3_k127_332117_5 Regulatory protein, FmdB - - - 0.000000000000000002174 90.0
BYD3_k127_3324136_0 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 436.0
BYD3_k127_3324136_1 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 391.0
BYD3_k127_3356322_0 histidine kinase HAMP region domain protein K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004343 288.0
BYD3_k127_3356322_1 Two component transcriptional regulator, winged helix family K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003077 279.0
BYD3_k127_3356322_2 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 0.0000000000000001475 93.0
BYD3_k127_335906_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 1.266e-251 789.0
BYD3_k127_335906_1 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 450.0
BYD3_k127_335906_10 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000005826 225.0
BYD3_k127_335906_11 Putative inner membrane exporter, YdcZ K09936 - - 0.000000000000000000000000000000000007241 143.0
BYD3_k127_335906_12 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000006443 134.0
BYD3_k127_335906_13 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.000000000000000000000000000000009549 142.0
BYD3_k127_335906_14 Belongs to the ClpA ClpB family K03696 - - 0.000000000000000000000000004071 120.0
BYD3_k127_335906_15 Acetyltransferase (GNAT) family - - - 0.0000000000000000009646 101.0
BYD3_k127_335906_16 Redoxin - - - 0.00000000000000005932 87.0
BYD3_k127_335906_17 translation initiation factor activity - - - 0.0000000000000001657 84.0
BYD3_k127_335906_18 ClpX C4-type zinc finger - - - 0.000000000009765 74.0
BYD3_k127_335906_19 2TM domain - - - 0.0000001693 59.0
BYD3_k127_335906_2 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007819 391.0
BYD3_k127_335906_20 methyltransferase - - - 0.0000003438 62.0
BYD3_k127_335906_21 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.00001893 50.0
BYD3_k127_335906_3 HMGL-like K18314 - 4.1.3.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009278 365.0
BYD3_k127_335906_4 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 362.0
BYD3_k127_335906_5 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 373.0
BYD3_k127_335906_6 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006356 345.0
BYD3_k127_335906_7 Ornithine cyclodeaminase/mu-crystallin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008602 285.0
BYD3_k127_335906_8 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000003249 273.0
BYD3_k127_335906_9 CoA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000008306 244.0
BYD3_k127_3364520_0 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 563.0
BYD3_k127_3364520_1 50S ribosome-binding GTPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 470.0
BYD3_k127_3364520_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 391.0
BYD3_k127_3364520_3 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 368.0
BYD3_k127_3364520_4 ROK family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007085 355.0
BYD3_k127_3364520_5 ATPases associated with a variety of cellular activities K10545 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 347.0
BYD3_k127_3364520_6 Periplasmic binding protein domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006386 288.0
BYD3_k127_3364520_7 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000422 199.0
BYD3_k127_3364520_8 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000001332 117.0
BYD3_k127_3370945_0 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000003137 152.0
BYD3_k127_3370945_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000001986 71.0
BYD3_k127_33713_0 PFAM carboxyl transferase K01969,K15052 - 2.1.3.15,6.4.1.3,6.4.1.4 3.022e-255 794.0
BYD3_k127_33713_1 PFAM FAD dependent oxidoreductase K00303 - 1.5.3.1 0.0000000000000000000000000000000000000000000000000000000000004579 222.0
BYD3_k127_33713_2 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000000000003922 144.0
BYD3_k127_33713_3 - - - - 0.00000000000000000000000000000002057 128.0
BYD3_k127_33713_5 COG0662 Mannose-6-phosphate isomerase - - - 0.000000000002349 80.0
BYD3_k127_3385178_0 Manganese containing catalase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 476.0
BYD3_k127_3385178_1 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 421.0
BYD3_k127_3385178_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001738 277.0
BYD3_k127_3385178_3 - - - - 0.0000000000000000000000000000000000000000000000000000000007184 207.0
BYD3_k127_3385178_4 - - - - 0.000000000000000000000000000000000000000000000008872 179.0
BYD3_k127_3385178_5 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000002295 100.0
BYD3_k127_3410316_0 AAA domain, putative AbiEii toxin, Type IV TA system K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 461.0
BYD3_k127_3410316_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000008566 156.0
BYD3_k127_3410316_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000001654 109.0
BYD3_k127_3410316_3 ABC-2 type transporter K09694 - - 0.000000000000003501 87.0
BYD3_k127_3417428_0 Catalyzes the formation of cyclic 2,3-diphosphoglycerate (cDPG) by formation of an intramolecular phosphoanhydride bond at the expense of ATP K05716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005005 383.0
BYD3_k127_3417428_1 acid phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 330.0
BYD3_k127_3417428_2 fructose-1,6-bisphosphatase K02446 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 294.0
BYD3_k127_3417428_3 2-phosphoglycerate kinase K05715 - - 0.0000000000000000000000000000000000000000000000000000698 211.0
BYD3_k127_3417428_4 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000557 181.0
BYD3_k127_3417428_5 Psort location Cytoplasmic, score K00760 - 2.4.2.8 0.0000000000000000000000000000001024 129.0
BYD3_k127_3417428_6 Iron-sulfur cluster assembly protein - - - 0.0000000000000002646 80.0
BYD3_k127_3421586_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 499.0
BYD3_k127_3421586_1 AAA ATPase, central domain protein K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 418.0
BYD3_k127_3421586_2 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009788 340.0
BYD3_k127_3421586_3 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001688 273.0
BYD3_k127_3421586_4 Peptidase family M41 - - - 0.00000000000000000000000000000000000000000000000000000000000009263 218.0
BYD3_k127_3421586_5 Protein of unknown function (DUF1385) - - - 0.0000000000000000000000000000000000000000000000000001041 200.0
BYD3_k127_3421586_6 EamA-like transporter family - - - 0.0000000000000000000000000000000003082 139.0
BYD3_k127_3450314_0 alpha beta alpha domain I K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002114 496.0
BYD3_k127_3450314_1 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 439.0
BYD3_k127_3450314_10 Hypothetical methyltransferase - - - 0.000000000000000004651 94.0
BYD3_k127_3450314_11 LysM domain - - - 0.00000002732 60.0
BYD3_k127_3450314_2 Thermophilic metalloprotease (M29) K19689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007351 399.0
BYD3_k127_3450314_3 PFAM peptidase M29, aminopeptidase II K19689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 385.0
BYD3_k127_3450314_4 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 367.0
BYD3_k127_3450314_5 CorA-like Mg2+ transporter protein K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006952 359.0
BYD3_k127_3450314_6 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006229 336.0
BYD3_k127_3450314_7 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000001361 237.0
BYD3_k127_3450314_8 PFAM histidine triad (HIT) protein K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000000000000004931 205.0
BYD3_k127_3450314_9 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000000003184 156.0
BYD3_k127_345240_0 ATPase P-type (Transporting), HAD superfamily, subfamily IC - - - 0.0 1038.0
BYD3_k127_345240_1 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 2.644e-289 920.0
BYD3_k127_345240_2 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002938 299.0
BYD3_k127_345240_3 response to copper ion - - - 0.00000000000000000000000000000000000000000000000000000000000000008154 241.0
BYD3_k127_345240_4 Heavy-metal-associated domain - - - 0.00000000001673 73.0
BYD3_k127_3460506_0 AAA domain (dynein-related subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 381.0
BYD3_k127_3460506_1 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003534 299.0
BYD3_k127_3460506_2 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000005482 246.0
BYD3_k127_3460506_3 von Willebrand factor, type A K07161 - - 0.0000001086 55.0
BYD3_k127_3500422_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 1.91e-255 800.0
BYD3_k127_3516418_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000006335 231.0
BYD3_k127_3516418_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000003792 183.0
BYD3_k127_3553962_0 Type III restriction enzyme, res subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 453.0
BYD3_k127_3553962_1 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000004432 156.0
BYD3_k127_3590553_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 3e-323 1020.0
BYD3_k127_3590553_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 2.487e-301 939.0
BYD3_k127_3590553_10 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000004112 91.0
BYD3_k127_3590553_11 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000001184 86.0
BYD3_k127_3590553_13 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00006128 51.0
BYD3_k127_3590553_2 Trehalose synthase K05343 GO:0000023,GO:0000271,GO:0003674,GO:0003824,GO:0004553,GO:0004556,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005984,GO:0005991,GO:0005992,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009311,GO:0009312,GO:0009987,GO:0015980,GO:0016020,GO:0016051,GO:0016160,GO:0016161,GO:0016787,GO:0016798,GO:0016853,GO:0016866,GO:0033692,GO:0034637,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046872,GO:0047471,GO:0055114,GO:0071704,GO:0071944,GO:1901576 3.2.1.1,5.4.99.16 1.816e-271 846.0
BYD3_k127_3590553_3 Rhodanese Homology Domain - - - 3.585e-203 657.0
BYD3_k127_3590553_4 protein, probably involved in trehalose biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003277 501.0
BYD3_k127_3590553_5 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 396.0
BYD3_k127_3590553_6 Molybdate transporter of MFS superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 379.0
BYD3_k127_3590553_7 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000008711 239.0
BYD3_k127_3590553_8 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000002478 233.0
BYD3_k127_3590553_9 Ferritin-like domain K22336 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000007078 198.0
BYD3_k127_3592242_0 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01697,K01738,K12339 - 2.5.1.47,4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 362.0
BYD3_k127_3592242_1 domain protein K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005457 327.0
BYD3_k127_3592242_2 JAB/MPN domain K21140 - 3.13.1.6 0.00000000288 70.0
BYD3_k127_3592796_0 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000001556 224.0
BYD3_k127_3592796_1 Histidinol dehydrogenase K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.000000000000000000000000000000000000000002595 172.0
BYD3_k127_3592796_2 Trp repressor protein - - - 0.00000000000000002177 85.0
BYD3_k127_3595556_0 Ectoine utilization protein EutC K01750,K19244 - 1.4.1.1,4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 533.0
BYD3_k127_3595556_1 Acetamidase/Formamidase family K01455 - 3.5.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000002059 265.0
BYD3_k127_3595556_2 Isochorismatase family K13995 - 3.5.1.107 0.00000000000000000000000000000000000000000000001225 181.0
BYD3_k127_3595556_3 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000002216 142.0
BYD3_k127_3595556_4 Putative regulatory protein - - - 0.00000005735 55.0
BYD3_k127_3595556_5 His Kinase A (phosphoacceptor) domain - - - 0.0002418 49.0
BYD3_k127_3607087_0 Aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008773 474.0
BYD3_k127_3607087_1 WYL domain K13573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003981 419.0
BYD3_k127_3607087_2 impB/mucB/samB family K02346 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000001563 278.0
BYD3_k127_3607087_3 - - - - 0.0000000000000000000000000000597 121.0
BYD3_k127_3607087_4 SMART PAS domain containing protein - - - 0.00000000000000000000000003426 112.0
BYD3_k127_3607087_5 Dehydrogenase K00074 - 1.1.1.157 0.0000000000002312 73.0
BYD3_k127_3615678_0 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 388.0
BYD3_k127_3615678_1 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 338.0
BYD3_k127_3615678_2 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000154 259.0
BYD3_k127_3615678_3 Belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000001753 244.0
BYD3_k127_3615678_4 - - - - 0.0000000000000000000005236 103.0
BYD3_k127_3616404_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 307.0
BYD3_k127_3616404_1 PAC2 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 289.0
BYD3_k127_3616404_2 Type III restriction enzyme, res subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000001588 248.0
BYD3_k127_3616404_3 Amidinotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000006574 231.0
BYD3_k127_3616404_4 cytochrome oxidase assembly K02259 - - 0.0000000000000000000000000000000000000006405 165.0
BYD3_k127_3617634_0 DNA polymerase III alpha subunit K02337,K14162 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 312.0
BYD3_k127_3617634_1 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000000000000000000009609 154.0
BYD3_k127_3617634_2 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000001859 117.0
BYD3_k127_3617634_3 Transglycosylase SLT domain - - - 0.000000000000000000006908 104.0
BYD3_k127_3617634_4 translation initiation factor activity K06996 - - 0.00000000000000001248 83.0
BYD3_k127_3617634_5 - - - - 0.0000007096 59.0
BYD3_k127_3619485_0 PFAM O-Antigen ligase - - - 0.0001113 55.0
BYD3_k127_3621741_0 aconitate hydratase K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0005506,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0008198,GO:0009060,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0015980,GO:0016020,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0030312,GO:0030350,GO:0032787,GO:0040007,GO:0042221,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046459,GO:0046872,GO:0046914,GO:0047456,GO:0048037,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 0.0 1167.0
BYD3_k127_3621741_1 COG2059 Chromate transport protein ChrA K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 513.0
BYD3_k127_3621741_2 Class II aldolase adducin family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 428.0
BYD3_k127_3621741_3 Predicted membrane protein (DUF2254) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001409 246.0
BYD3_k127_3621741_4 Pfam 2OG-Fe(II) oxygenase - - - 0.000000000000000000000000000000000005011 141.0
BYD3_k127_3643675_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 489.0
BYD3_k127_3643675_1 Aminotransferase, class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000004106 180.0
BYD3_k127_3643675_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000002593 168.0
BYD3_k127_3643675_3 OsmC-like protein K04063 - - 0.00000000000000000000000000000000000000002073 159.0
BYD3_k127_3643675_4 Aminoacyl-tRNA editing domain - - - 0.0000000000000000000000432 104.0
BYD3_k127_3662673_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 467.0
BYD3_k127_3662673_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009038 321.0
BYD3_k127_3662673_2 Single-strand binding protein family K03111 - - 0.0000000000000000000000000000000000000000006698 161.0
BYD3_k127_3662673_3 Binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000001929 146.0
BYD3_k127_3662673_4 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000002481 111.0
BYD3_k127_3681030_0 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000002911 197.0
BYD3_k127_3681030_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000001675 99.0
BYD3_k127_3687224_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 346.0
BYD3_k127_3687224_1 PFAM LemA K03744 - - 0.00000000000000000000000000000000000000000000000000000002782 201.0
BYD3_k127_3687224_2 Methyltransferase small domain - - - 0.000000000000000000000000008211 122.0
BYD3_k127_3687224_3 phenylalanyl-tRNA synthetase beta subunit K01890 - 6.1.1.20 0.0000000000000000000000004361 108.0
BYD3_k127_3688412_0 COG0146 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 4.212e-217 687.0
BYD3_k127_3688412_1 Hydantoinase/oxoprolinase K01469,K01473 - 3.5.2.14,3.5.2.9 0.000000000000000000002217 98.0
BYD3_k127_3689390_0 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.00000000000000000000000000000000000000000000000000009501 207.0
BYD3_k127_3689390_1 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000001101 186.0
BYD3_k127_3689390_2 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000043 124.0
BYD3_k127_3689390_3 Heavy-metal-associated domain K07213 - - 0.0000314 48.0
BYD3_k127_3697709_0 Conserved TM helix - - - 0.0000000000000000000000000000000000000000000000000000000002854 214.0
BYD3_k127_3697709_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000104 171.0
BYD3_k127_3697709_2 TIM-barrel protein, nifR3 family - GO:0008150,GO:0010565,GO:0019216,GO:0019217,GO:0019222,GO:0031323,GO:0050789,GO:0050794,GO:0062012,GO:0065007,GO:0080090 - 0.000000000000000000003023 101.0
BYD3_k127_3710527_0 peptidase dimerisation domain K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007402 370.0
BYD3_k127_3710527_1 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000003848 216.0
BYD3_k127_3710527_2 COGs COG3367 conserved K16149 - 2.4.1.18 0.0000000000000000009964 100.0
BYD3_k127_3710527_3 Belongs to the universal stress protein A family - - - 0.00000001807 57.0
BYD3_k127_3712307_0 ATPase P-type (Transporting), HAD superfamily, subfamily IC K01535,K01537 - 3.6.3.6,3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 535.0
BYD3_k127_3756686_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006929 358.0
BYD3_k127_3756686_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002495 274.0
BYD3_k127_3756686_2 Protein of unknown function DUF58 - - - 0.0000000000000000000000141 117.0
BYD3_k127_3772914_0 DAHP synthetase I family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 430.0
BYD3_k127_3772914_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007207 370.0
BYD3_k127_3772914_2 RNA pseudouridylate synthase K06178 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000004658 237.0
BYD3_k127_3772914_3 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000008154 191.0
BYD3_k127_3772914_4 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.000000000000000000000000000000000000000000000000001545 185.0
BYD3_k127_3813124_0 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 406.0
BYD3_k127_3813124_1 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000642 370.0
BYD3_k127_3813124_10 glutamine-fructose-6-phosphate transaminase (isomerizing) activity - - - 0.000000000000000003308 98.0
BYD3_k127_3813124_11 Putative zinc-finger - - - 0.000009252 51.0
BYD3_k127_3813124_12 LytR cell envelope-related transcriptional attenuator - - - 0.00002636 55.0
BYD3_k127_3813124_13 - - - - 0.0002163 54.0
BYD3_k127_3813124_2 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 348.0
BYD3_k127_3813124_3 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000135 274.0
BYD3_k127_3813124_4 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000001563 218.0
BYD3_k127_3813124_5 3-hydroxyanthranilate 3,4-dioxygenase activity - - - 0.00000000000000000000000000000000000000000000009352 185.0
BYD3_k127_3813124_6 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000001384 170.0
BYD3_k127_3813124_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000005497 152.0
BYD3_k127_3813124_8 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.00000000000000000000000000000000000001937 149.0
BYD3_k127_3813124_9 PFAM thioesterase superfamily protein K07107 - - 0.0000000000000000000000000005133 121.0
BYD3_k127_3815394_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008296 572.0
BYD3_k127_3815394_1 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 340.0
BYD3_k127_3815394_2 Histidine kinase - - - 0.000000000000000000000000000000000000003488 161.0
BYD3_k127_3825866_0 Major facilitator superfamily K08170 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 322.0
BYD3_k127_3825866_1 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000003568 104.0
BYD3_k127_3825866_2 Transcriptional regulator - - - 0.000000000000000000384 102.0
BYD3_k127_3826756_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 4.948e-205 659.0
BYD3_k127_3826756_1 TIGRFAM FeS assembly protein SufB K07033,K09014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 340.0
BYD3_k127_3826756_10 - - - - 0.0000000000000000000000003638 113.0
BYD3_k127_3826756_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000002391 71.0
BYD3_k127_3826756_12 PFAM blue (type 1) copper domain protein K07243 - - 0.00000000008205 72.0
BYD3_k127_3826756_13 Cytochrome c K05301 - 1.8.2.1 0.0000000002703 70.0
BYD3_k127_3826756_2 PFAM ABC transporter related K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 331.0
BYD3_k127_3826756_3 I and II form the functional core of the enzyme complex. electrons originating in cytochrome C are transferred via HemE a and cu(a) to the binuclear center formed by HemE A3 and cu(B) K02275 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0040007,GO:0042773,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0051704,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001801 265.0
BYD3_k127_3826756_4 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960,K20810 GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0050270 3.5.4.28,3.5.4.31,3.5.4.40 0.0000000000000000000000000000000000000000000000000000000000000000000000008378 273.0
BYD3_k127_3826756_5 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000001275 263.0
BYD3_k127_3826756_6 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000427 253.0
BYD3_k127_3826756_7 amino acid transport K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000003374 256.0
BYD3_k127_3826756_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000001382 130.0
BYD3_k127_3826756_9 Belongs to the anti-sigma-factor antagonist family K04749 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000002231 124.0
BYD3_k127_3830702_0 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000003263 169.0
BYD3_k127_3830702_1 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000002035 143.0
BYD3_k127_3830702_2 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000008162 134.0
BYD3_k127_387945_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 340.0
BYD3_k127_387945_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008424 310.0
BYD3_k127_387945_2 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 302.0
BYD3_k127_387945_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000006287 93.0
BYD3_k127_3892135_1 Belongs to the glutamate synthase family - - - 0.0000000000000000000000000000000000000000004542 159.0
BYD3_k127_3892135_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000009078 161.0
BYD3_k127_3892135_3 Psort location Cytoplasmic, score - - - 0.00000000000000000009941 99.0
BYD3_k127_390361_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 530.0
BYD3_k127_390361_1 PFAM UDP-glucose GDP-mannose dehydrogenase K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007408 451.0
BYD3_k127_390361_2 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000384 262.0
BYD3_k127_390361_3 CoA-binding domain K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000002785 180.0
BYD3_k127_390361_4 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000003442 134.0
BYD3_k127_390361_5 Telomere recombination K07566 - 2.7.7.87 0.0000000000000000000000000001531 121.0
BYD3_k127_390361_6 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000003764 84.0
BYD3_k127_390361_7 NAD-dependent epimerase dehydratase K01784,K17947 - 5.1.3.2,5.1.3.25 0.000000000178 71.0
BYD3_k127_3908400_0 Zn_pept - - - 0.0 1175.0
BYD3_k127_3908400_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 3.587e-277 899.0
BYD3_k127_3908400_10 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000365 158.0
BYD3_k127_3908400_11 - - - - 0.000000000000000000000000000000009822 135.0
BYD3_k127_3908400_12 Transcriptional regulator - - - 0.000000000000000000004145 95.0
BYD3_k127_3908400_13 cellulose binding - - - 0.0000000000002096 81.0
BYD3_k127_3908400_14 cellulose binding - - - 0.0000000000002369 84.0
BYD3_k127_3908400_2 DHH family K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 505.0
BYD3_k127_3908400_3 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 460.0
BYD3_k127_3908400_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005476 417.0
BYD3_k127_3908400_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 320.0
BYD3_k127_3908400_6 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000004971 290.0
BYD3_k127_3908400_7 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000007375 225.0
BYD3_k127_3908400_8 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000009066 204.0
BYD3_k127_3908400_9 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000005054 151.0
BYD3_k127_3921325_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 377.0
BYD3_k127_3921325_1 Heat shock 70 kDa protein K04043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 285.0
BYD3_k127_3921325_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.000000000000000000000000000000000000000000000000000000000000001014 231.0
BYD3_k127_3921325_3 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000006805 121.0
BYD3_k127_3921325_4 MerR HTH family regulatory protein K13640 - - 0.0000000000000000000000007605 119.0
BYD3_k127_3922241_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 360.0
BYD3_k127_3922241_1 type II secretion system protein E K02652 - - 0.000000000000000246 89.0
BYD3_k127_3928281_0 Cys/Met metabolism PLP-dependent enzyme K01739,K01758,K01760,K01761 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009092,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0017144,GO:0019279,GO:0019343,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071265,GO:0071266,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 381.0
BYD3_k127_3928281_1 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008341 271.0
BYD3_k127_3931139_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 1.204e-221 709.0
BYD3_k127_3931139_1 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 5.311e-207 661.0
BYD3_k127_3931139_10 Binding-protein-dependent transport system inner membrane component K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 321.0
BYD3_k127_3931139_11 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K09971 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001211 299.0
BYD3_k127_3931139_12 amino acid ABC transporter K09970 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001644 274.0
BYD3_k127_3931139_13 Glyoxalase-like domain K07104 - 1.13.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000002934 255.0
BYD3_k127_3931139_14 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001179 250.0
BYD3_k127_3931139_15 helix_turn_helix ASNC type K03718 - - 0.00000000000000000000000000000000000000000003161 182.0
BYD3_k127_3931139_16 Polysaccharide biosynthesis C-terminal domain - - - 0.0000000000000000000000000000001514 140.0
BYD3_k127_3931139_17 glyoxalase III activity - - - 0.0000000000000000000000000004395 123.0
BYD3_k127_3931139_18 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000546 123.0
BYD3_k127_3931139_19 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.000000000000000000000004265 102.0
BYD3_k127_3931139_2 Aldehyde dehydrogenase family K00137 - 1.2.1.19 2.317e-200 644.0
BYD3_k127_3931139_20 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000003416 106.0
BYD3_k127_3931139_21 cyclohydrolase K01746 - 4.3.1.4 0.00000000001525 76.0
BYD3_k127_3931139_22 - - - - 0.000005545 57.0
BYD3_k127_3931139_3 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007387 447.0
BYD3_k127_3931139_4 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009655 422.0
BYD3_k127_3931139_5 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 392.0
BYD3_k127_3931139_6 AAA domain, putative AbiEii toxin, Type IV TA system K02028,K09972,K10041 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 383.0
BYD3_k127_3931139_7 amino acid transport K09969 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 350.0
BYD3_k127_3931139_8 PFAM extracellular solute-binding protein family 1 K11069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000649 366.0
BYD3_k127_3931139_9 Binding-protein-dependent transport system inner membrane component K11071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002888 337.0
BYD3_k127_3957207_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family K00317 - 1.5.8.1,1.5.8.2 3.724e-228 726.0
BYD3_k127_3957207_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006261 399.0
BYD3_k127_3957207_2 COG1177 ABC-type spermidine putrescine transport system, permease component II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009064 276.0
BYD3_k127_3959085_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005968 421.0
BYD3_k127_3959085_1 Aminotransferase class-V K11325 - - 0.000000000000000000000000000000000000000000000000000000000000003158 240.0
BYD3_k127_3959085_2 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000006392 214.0
BYD3_k127_3959085_3 ABC-2 family transporter protein - - - 0.0000000000000000000000000000000000000000000000000006192 192.0
BYD3_k127_3959085_4 - - - - 0.0000000000000000000000000000000000000000001615 164.0
BYD3_k127_3959085_5 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000123 87.0
BYD3_k127_3961022_0 histidine kinase DNA gyrase B - - - 0.00000000000000001283 96.0
BYD3_k127_3961022_1 domain, Protein K01212,K12287,K20276 - 3.2.1.65 0.00000000008274 74.0
BYD3_k127_3961022_2 ig-like, plexins, transcription factors - - - 0.00000001385 66.0
BYD3_k127_3967656_0 Metallo-peptidase family M12B Reprolysin-like - - - 1.661e-316 1002.0
BYD3_k127_3967656_1 PFAM Formiminotransferase domain K00603,K13990 - 2.1.2.5,4.3.1.4 0.0002626 45.0
BYD3_k127_3970105_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 460.0
BYD3_k127_3970105_1 Rhodanese Homology Domain K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009051 301.0
BYD3_k127_3970105_2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005922 242.0
BYD3_k127_3970105_3 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000002423 220.0
BYD3_k127_3970105_4 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000004083 205.0
BYD3_k127_3970105_5 Glycosyl transferase 4-like - - - 0.0000000000000000000000000004613 129.0
BYD3_k127_3970105_6 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000009301 123.0
BYD3_k127_3970105_7 protein N-acetylglucosaminyltransferase activity - - - 0.00000000000001797 77.0
BYD3_k127_4040664_0 CBS domain containing protein K07182 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 475.0
BYD3_k127_4040664_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000525 217.0
BYD3_k127_4054284_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 337.0
BYD3_k127_4054284_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004968 295.0
BYD3_k127_4054284_2 Cupin domain - - - 0.000000000000000000000000000000000000000004866 170.0
BYD3_k127_4054284_3 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.0000000000000000000000006845 117.0
BYD3_k127_4054284_4 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016020,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0004156 47.0
BYD3_k127_4059183_0 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 325.0
BYD3_k127_4059183_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000161 267.0
BYD3_k127_4059183_2 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor - - - 0.00000001249 59.0
BYD3_k127_4059183_3 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor - - - 0.00000007001 59.0
BYD3_k127_4087243_0 ABC transporter, ATP-binding protein K16786,K16787 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002015 276.0
BYD3_k127_4087243_1 Transglycosylase associated protein - - - 0.0000000000000000001261 102.0
BYD3_k127_4112913_0 magnesium chelatase, ChlI subunit K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 444.0
BYD3_k127_4112913_1 HD-GYP domain K03540 - 3.1.26.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 348.0
BYD3_k127_4112913_10 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000005617 140.0
BYD3_k127_4112913_11 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000000000000566 114.0
BYD3_k127_4112913_12 Periplasmic copper-binding protein (NosD) - - - 0.0000000000000000001066 101.0
BYD3_k127_4112913_13 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000002093 86.0
BYD3_k127_4112913_14 - - - - 0.000000000000006916 89.0
BYD3_k127_4112913_15 Belongs to the UPF0109 family K06960 - - 0.0000000000006346 80.0
BYD3_k127_4112913_16 Belongs to the UPF0102 family K07460 - - 0.000000000002117 80.0
BYD3_k127_4112913_2 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002344 298.0
BYD3_k127_4112913_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000005717 221.0
BYD3_k127_4112913_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000001257 205.0
BYD3_k127_4112913_5 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000005175 205.0
BYD3_k127_4112913_6 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.000000000000000000000000000000000000000000000000000006096 213.0
BYD3_k127_4112913_7 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000001479 194.0
BYD3_k127_4112913_8 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000004097 169.0
BYD3_k127_4112913_9 PFAM Peptidase S24 S26A S26B, conserved region K03100 - 3.4.21.89 0.00000000000000000000000000000000000000001241 169.0
BYD3_k127_4156933_0 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003421 402.0
BYD3_k127_4156933_1 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004324 283.0
BYD3_k127_4163827_0 TAP-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 561.0
BYD3_k127_4163827_1 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008193 448.0
BYD3_k127_4163827_2 MMPL family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 404.0
BYD3_k127_4163827_3 Protein of unknown function (DUF1211) - - - 0.00000000000000000000000000000000000000002974 159.0
BYD3_k127_4163827_4 FR47-like protein - - - 0.0000001876 62.0
BYD3_k127_4235952_0 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008228 348.0
BYD3_k127_4235952_1 Phosphorylase superfamily K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 341.0
BYD3_k127_4235952_2 WD domain, G-beta repeat K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000002407 184.0
BYD3_k127_4235952_3 Thioesterase domain - - - 0.00000000000000000001933 101.0
BYD3_k127_4235952_4 - - - - 0.000000000001157 74.0
BYD3_k127_4246115_0 Aminotransferase class-III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008216 475.0
BYD3_k127_4246115_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 406.0
BYD3_k127_4246115_2 Belongs to the aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 305.0
BYD3_k127_4246115_3 PFAM AIR synthase related protein, N-terminal domain K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008676 314.0
BYD3_k127_4246115_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000003204 202.0
BYD3_k127_4246115_5 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000000000000001863 85.0
BYD3_k127_4277276_0 PFAM extracellular solute-binding protein, family 5 K15580 - - 0.000000000000000000000000000000000000000000000006182 197.0
BYD3_k127_4277276_1 Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000004071 172.0
BYD3_k127_4283988_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 6.868e-246 781.0
BYD3_k127_4283988_1 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000001081 200.0
BYD3_k127_4283988_2 Lysyl oxidase - - - 0.0000000000000000001231 102.0
BYD3_k127_4283988_3 HxlR-like helix-turn-helix - - - 0.0000000000000007703 81.0
BYD3_k127_4289991_0 Beta-eliminating lyase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 343.0
BYD3_k127_4289991_1 pyrroloquinoline quinone binding - - - 0.0000000000000000006313 94.0
BYD3_k127_4293265_0 Spermine/spermidine synthase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 434.0
BYD3_k127_4293265_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007723 416.0
BYD3_k127_4293265_11 Septum formation initiator - - - 0.0000001196 57.0
BYD3_k127_4293265_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000001522 234.0
BYD3_k127_4293265_3 SMART protein phosphatase 2C domain protein - - - 0.0000000000000000000000000000000000000000000000332 196.0
BYD3_k127_4293265_4 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000001336 139.0
BYD3_k127_4293265_5 glycerophosphodiester phosphodiesterase activity K01126 - 3.1.4.46 0.00000000000000000000000000003454 136.0
BYD3_k127_4293265_6 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.00000000000000000000000000003917 125.0
BYD3_k127_4293265_7 Protein of unknown function (DUF501) K09009 - - 0.0000000000000000000000000001186 121.0
BYD3_k127_4293265_8 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000002091 102.0
BYD3_k127_4293265_9 PFAM phosphoesterase, PA-phosphatase related K19302 - 3.6.1.27 0.0000000000000002497 89.0
BYD3_k127_4295373_0 acyl-CoA dehydrogenase - - - 9.242e-231 722.0
BYD3_k127_4295373_1 The glycine cleavage system catalyzes the degradation of glycine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 647.0
BYD3_k127_4295373_2 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001218 286.0
BYD3_k127_4295373_3 response regulator receiver - - - 0.000000000000000000000007736 103.0
BYD3_k127_4298058_0 Formiminotransferase domain, N-terminal subdomain K00603 - 2.1.2.5 0.0000000000000000000000000000000000000000000000000000000000004655 229.0
BYD3_k127_4298058_1 Protein-disulfide isomerase - - - 0.000000000000000000000000000000000000000000006464 173.0
BYD3_k127_4298058_2 VKc - - - 0.0000000000002545 82.0
BYD3_k127_4310736_0 Carboxypeptidase - - - 4.957e-304 953.0
BYD3_k127_4310736_1 RF-1 domain K15034 - - 0.00000000000006798 74.0
BYD3_k127_4310736_2 Response regulator receiver K02479 - - 0.00000000318 58.0
BYD3_k127_4312749_0 PFAM MMPL domain protein K06994 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007339 499.0
BYD3_k127_4314126_0 Belongs to the transketolase family K00615 - 2.2.1.1 7.844e-269 840.0
BYD3_k127_4314126_1 ABC transporter K06158 - - 6.642e-201 648.0
BYD3_k127_4314126_2 Transaldolase/Fructose-6-phosphate aldolase K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 458.0
BYD3_k127_4314126_3 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K01810,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 380.0
BYD3_k127_4314126_4 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006127 359.0
BYD3_k127_4314126_5 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 294.0
BYD3_k127_4314126_6 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000001331 188.0
BYD3_k127_4314126_7 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.0000000000000000000000000000000000000002785 161.0
BYD3_k127_4327087_0 Domain of unknown function (DUF4032) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007555 418.0
BYD3_k127_4327087_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002941 292.0
BYD3_k127_4327087_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000002136 162.0
BYD3_k127_4359867_0 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001364 291.0
BYD3_k127_4359867_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0001101,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042221,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.000000000000000000000000000000008835 133.0
BYD3_k127_4359867_2 Domain of unknown function (DUF202) K00389 - - 0.0000000000000004724 91.0
BYD3_k127_4359867_3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000000496 55.0
BYD3_k127_4405130_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 545.0
BYD3_k127_4405130_1 ABC1 family K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 325.0
BYD3_k127_4405130_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000003293 186.0
BYD3_k127_4405130_3 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.0000000000000000005795 92.0
BYD3_k127_4405130_4 ATP synthase, subunit b - - - 0.00000000009884 70.0
BYD3_k127_4406025_0 Cell shape determining protein MreB Mrl K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004408 278.0
BYD3_k127_4406025_1 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000002047 227.0
BYD3_k127_4406025_2 rod shape-determining protein MreC K03570 - - 0.0000000000000000000000000000000000003542 152.0
BYD3_k127_4406025_3 rod shape-determining protein MreD K03571 - - 0.0000000002024 73.0
BYD3_k127_4445058_0 LVIVD repeat - - - 2.862e-220 698.0
BYD3_k127_4445058_1 Low temperature requirement - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005005 526.0
BYD3_k127_4445058_10 - K10716 - - 0.000000000000000000000000000001964 134.0
BYD3_k127_4445058_11 Lysylphosphatidylglycerol synthase TM region - - - 0.00000000000000000000000008765 119.0
BYD3_k127_4445058_12 - - - - 0.00000000000002453 83.0
BYD3_k127_4445058_13 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000000009961 74.0
BYD3_k127_4445058_14 - - - - 0.000000001763 64.0
BYD3_k127_4445058_15 - - - - 0.000009605 52.0
BYD3_k127_4445058_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 469.0
BYD3_k127_4445058_3 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002511 264.0
BYD3_k127_4445058_4 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000001771 239.0
BYD3_k127_4445058_5 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000001606 201.0
BYD3_k127_4445058_6 Protein of unknown function (DUF3152) - - - 0.000000000000000000000000000000000000000000000004735 188.0
BYD3_k127_4445058_7 Domain of unknown function (DUF4142) - - - 0.00000000000000000000000000000000000000544 154.0
BYD3_k127_4445058_8 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000006142 157.0
BYD3_k127_4445058_9 glycerophosphoryl diester phosphodiesterase - - - 0.00000000000000000000000000000005824 133.0
BYD3_k127_4458319_0 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000002698 172.0
BYD3_k127_4458319_1 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000003086 136.0
BYD3_k127_448594_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000578 299.0
BYD3_k127_448594_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000001547 196.0
BYD3_k127_4486644_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 368.0
BYD3_k127_4486644_1 COGs COG3367 conserved K16149 - 2.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000000003893 241.0
BYD3_k127_4486644_2 - - - - 0.0000000000000000000000000000000000006338 139.0
BYD3_k127_4486644_3 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000001231 122.0
BYD3_k127_4537965_0 Ftsk_gamma K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 582.0
BYD3_k127_4537965_1 Psort location Cytoplasmic, score 7.50 K01250 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 315.0
BYD3_k127_4537965_2 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 GO:0003674,GO:0003824,GO:0004747,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0046835,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 2.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000005984 249.0
BYD3_k127_4540026_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 429.0
BYD3_k127_4540026_1 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 409.0
BYD3_k127_4540026_10 4Fe-4S single cluster domain - - - 0.0002387 52.0
BYD3_k127_4540026_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 365.0
BYD3_k127_4540026_3 Reductase C-terminal K00529 - 1.18.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 327.0
BYD3_k127_4540026_4 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001836 277.0
BYD3_k127_4540026_5 T4-like virus tail tube protein gp19 - - - 0.000000000000000000000000000000000000000000000000000000006917 204.0
BYD3_k127_4540026_6 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000006788 184.0
BYD3_k127_4540026_7 protein conserved in bacteria - - - 0.000000000000000000000005569 108.0
BYD3_k127_4540026_8 PFAM Ferric reductase domain protein transmembrane component domain K17247 - - 0.00000000000000000000001651 115.0
BYD3_k127_4555193_0 MacB-like periplasmic core domain K02004 - - 4.813e-217 713.0
BYD3_k127_4555193_1 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 443.0
BYD3_k127_4555193_2 PFAM ABC transporter related K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 343.0
BYD3_k127_4555193_3 PFAM Haloacid dehalogenase domain protein hydrolase K07025 - - 0.000000000000000000004932 102.0
BYD3_k127_4555193_4 peptidoglycan catabolic process - - - 0.00000000000439 73.0
BYD3_k127_4556251_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1611.0
BYD3_k127_4556251_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.919e-229 736.0
BYD3_k127_4556251_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000008313 227.0
BYD3_k127_4556251_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000001634 202.0
BYD3_k127_4556251_4 Forkhead associated domain - - - 0.00000000000000000000000000000009134 140.0
BYD3_k127_4562713_0 AAA ATPase domain - - - 0.0000000000000005664 85.0
BYD3_k127_4562713_1 Protein of unknown function (DUF4242) - - - 0.00000001873 58.0
BYD3_k127_4573521_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 461.0
BYD3_k127_4573521_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 331.0
BYD3_k127_4573521_2 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005987 325.0
BYD3_k127_4573521_3 HD domain - - - 0.0000000000000000000000000000000000000000000000000000009437 206.0
BYD3_k127_4573521_4 Bacterial low temperature requirement A protein (LtrA) - - - 0.00000000000000000000000000000000000000000000000001721 185.0
BYD3_k127_4573521_5 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000003336 143.0
BYD3_k127_4573521_6 ABC-2 family transporter protein K01992 - - 0.000000000000000000000004855 114.0
BYD3_k127_4573521_7 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000001024 61.0
BYD3_k127_4574099_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002674 463.0
BYD3_k127_4574099_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 403.0
BYD3_k127_4574099_2 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000308 276.0
BYD3_k127_4574099_3 Carbamoyl-phosphate synthase L chain, ATP-binding Carbamoyl-phosphate synthetase large chain-like biotin carboxylase-like K11263 - 6.3.4.14,6.4.1.2,6.4.1.3 0.0000000000000000000000000000000000000000000000007492 183.0
BYD3_k127_4574099_4 PFAM Sucraseferredoxin family protein - - - 0.0000000000000000000000000000000000000000001074 171.0
BYD3_k127_4574099_5 - - - - 0.0004335 47.0
BYD3_k127_4590661_0 Domain of unknown function (DUF4389) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 424.0
BYD3_k127_4590661_1 Acetokinase family K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007537 315.0
BYD3_k127_4590661_2 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002781 290.0
BYD3_k127_4590661_3 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000001064 203.0
BYD3_k127_4601699_0 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000007833 191.0
BYD3_k127_4601699_1 COG COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism General function prediction only - - - 0.0000000000000000000000000000000000000157 154.0
BYD3_k127_4601699_2 LVIVD repeat - - - 0.00000000000003796 75.0
BYD3_k127_4601699_3 - - - - 0.000001456 54.0
BYD3_k127_4607785_0 Binding-protein-dependent transport system inner membrane component K02029,K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009998 327.0
BYD3_k127_4607785_1 ABC-type polar amino acid transport system ATPase component K02028 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000001557 271.0
BYD3_k127_4607785_2 Bacterial periplasmic substrate-binding proteins K02030,K02424,K17073 - - 0.000000000000000000000000000000000000271 143.0
BYD3_k127_4615864_0 cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 457.0
BYD3_k127_4615864_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 289.0
BYD3_k127_4615864_2 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000005202 195.0
BYD3_k127_4615864_3 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000007513 151.0
BYD3_k127_4615864_4 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.0000000000000000000007493 109.0
BYD3_k127_4615864_5 carboxymuconolactone decarboxylase K01607 - 4.1.1.44 0.00000000000000000002514 99.0
BYD3_k127_4615864_6 PFAM thioesterase superfamily - - - 0.000000000000000001655 91.0
BYD3_k127_4625037_0 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 527.0
BYD3_k127_4625037_1 Proline racemase K01777 - 5.1.1.4 0.0000000000000000000000000000000000000000000003396 171.0
BYD3_k127_4625037_2 DNA polymerase X K02347 - - 0.000000000000000000000000000000000000000000004125 167.0
BYD3_k127_463588_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 427.0
BYD3_k127_463588_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 364.0
BYD3_k127_463588_2 2 iron, 2 sulfur cluster binding K00334,K03943 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000002177 139.0
BYD3_k127_4638218_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008428 601.0
BYD3_k127_4638218_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 578.0
BYD3_k127_4638218_2 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 327.0
BYD3_k127_4638218_3 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.000000000000000000000000000000000000000000000000319 186.0
BYD3_k127_4638218_4 protein involved in propionate catabolism - - - 0.0000000000000000000007621 99.0
BYD3_k127_4649598_0 ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004925 404.0
BYD3_k127_4649598_1 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002092 280.0
BYD3_k127_4649598_2 SMART PAS domain containing protein - - - 0.000000000000000000000000000000000000000000000575 190.0
BYD3_k127_4649598_3 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.000000000000000000000000000000000000000000006805 176.0
BYD3_k127_4649598_4 - - - - 0.0000000000000000000000000000000000001589 163.0
BYD3_k127_4649598_5 - - - - 0.0000000000000001789 96.0
BYD3_k127_4649598_6 Domain of unknown function (DUF4234) - - - 0.0000000005399 66.0
BYD3_k127_4660675_0 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008437 276.0
BYD3_k127_4660675_1 AhpC/TSA family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000001765 212.0
BYD3_k127_466703_0 Cys/Met metabolism PLP-dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 479.0
BYD3_k127_466703_1 Response regulator receiver K07776 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009405,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0031323,GO:0031326,GO:0044419,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0080134,GO:0097159,GO:1901363,GO:1902882,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000002167 233.0
BYD3_k127_466703_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07652 - 2.7.13.3 0.000000000000000000000000000000000000000001607 177.0
BYD3_k127_466703_3 Amidohydrolase family K01465,K06015 - 3.5.1.81,3.5.2.3 0.000000000000000000000000000000000007331 147.0
BYD3_k127_4683122_0 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000205 235.0
BYD3_k127_4683122_1 NLP P60 protein K21471 - - 0.000000000000000000000000000000000000001542 161.0
BYD3_k127_4683122_2 G5 - - - 0.000000000000000001228 101.0
BYD3_k127_4683122_3 - - - - 0.000000001611 61.0
BYD3_k127_469739_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 339.0
BYD3_k127_469739_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 342.0
BYD3_k127_469739_2 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009858 243.0
BYD3_k127_469739_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000186 246.0
BYD3_k127_469739_4 Cytidylyltransferase family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000001485 187.0
BYD3_k127_469739_5 Peptidase family M50 K11749 - - 0.0000000000000000000000000000000000000000001001 183.0
BYD3_k127_469739_6 Gram-negative-bacterium-type cell wall biogenesis - - - 0.000000000000000000000001856 115.0
BYD3_k127_469739_7 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000001203 65.0
BYD3_k127_4701118_0 the transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 504.0
BYD3_k127_4701118_1 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.000000000000000000000000000000000000000004253 157.0
BYD3_k127_4701118_2 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.00000000000000000000000000001255 126.0
BYD3_k127_4701118_3 Transglycosylase associated protein - - - 0.000000000005037 67.0
BYD3_k127_4720240_0 zinc transporter K07238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003087 259.0
BYD3_k127_4720240_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004428 257.0
BYD3_k127_4720240_2 helix_turn_helix, Lux Regulon K03556 - - 0.000000000000000000000000000000000000000008394 169.0
BYD3_k127_4752910_0 Tubulin/FtsZ family, GTPase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 426.0
BYD3_k127_4752910_1 Cellulose biosynthesis protein BcsQ K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007162 365.0
BYD3_k127_4752910_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000004641 243.0
BYD3_k127_4752910_3 Domain of unknown function (DUF4383) - - - 0.0000000000000000000000000000000000000000166 164.0
BYD3_k127_4752910_4 peptidase M36 K01417 - - 0.0004035 45.0
BYD3_k127_4760662_0 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 355.0
BYD3_k127_4760662_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 306.0
BYD3_k127_4760662_2 Cell shape determining protein MreB Mrl K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000633 268.0
BYD3_k127_4760662_3 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009284 269.0
BYD3_k127_4760662_4 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000003813 186.0
BYD3_k127_4760662_5 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000003861 189.0
BYD3_k127_4760662_6 Double zinc ribbon - - - 0.00000000000000000000000000000000000001143 152.0
BYD3_k127_4760662_7 translation initiation factor activity - - - 0.000000000004038 72.0
BYD3_k127_482418_0 AzlC protein - - - 0.000000000000000000000000000000000000000000000000000000000000000364 235.0
BYD3_k127_482418_1 PFAM N-acetylglucosaminyl phosphatidylinositol deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000004718 225.0
BYD3_k127_482418_2 ABC 3 transport family K09816 - - 0.000000000000000000000000000000000000000000000000000000000247 214.0
BYD3_k127_482418_3 ATPases associated with a variety of cellular activities K09817 - - 0.00000000000000000000000000000000000000000000000000328 196.0
BYD3_k127_482418_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000003512 188.0
BYD3_k127_482418_5 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.000000000000000000000000000000000003542 142.0
BYD3_k127_482418_6 protein N-acetylglucosaminyltransferase activity - - - 0.0000000000000000000000000000001403 143.0
BYD3_k127_482418_7 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process - - - 0.00000000000000000000000000003985 132.0
BYD3_k127_4829717_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007288 444.0
BYD3_k127_4829717_1 aminotransferase class V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 436.0
BYD3_k127_4829717_2 metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 352.0
BYD3_k127_4829717_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009473 310.0
BYD3_k127_4829717_4 HAD-hyrolase-like K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000005831 234.0
BYD3_k127_4829717_5 Proline racemase K01777 - 5.1.1.4 0.00000000000000000000000000000001559 128.0
BYD3_k127_4872855_0 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 336.0
BYD3_k127_4872855_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299 - 1.17.1.10,1.17.1.9 0.0000000000000000000000000000000000000000000000000000008252 197.0
BYD3_k127_4878161_0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 366.0
BYD3_k127_4878161_1 Psort location Cytoplasmic, score K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000005422 257.0
BYD3_k127_4878161_2 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000002006 247.0
BYD3_k127_4878161_3 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000004725 174.0
BYD3_k127_4878161_4 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.00000000000000000000000000000000000003905 153.0
BYD3_k127_4878161_5 N-acetylmuramoyl-L-alanine amidase - - - 0.000000000000000000000000000000000000575 143.0
BYD3_k127_4878161_6 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000003308 130.0
BYD3_k127_4878161_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000308 104.0
BYD3_k127_4878161_8 Subtilase family K13274,K14645 - - 0.0000000000005322 80.0
BYD3_k127_488096_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 462.0
BYD3_k127_488096_1 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 366.0
BYD3_k127_488096_2 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 323.0
BYD3_k127_4880987_0 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000002538 232.0
BYD3_k127_4880987_1 SMART PAS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000004038 219.0
BYD3_k127_4880987_2 PFAM response regulator receiver K02483,K07658,K07668 - - 0.000000000000000000000000000002664 124.0
BYD3_k127_4891202_0 DNA polymerase K02335 - 2.7.7.7 8.494e-207 666.0
BYD3_k127_4891202_1 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008728 571.0
BYD3_k127_4891202_2 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005937 536.0
BYD3_k127_4891202_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000832 97.0
BYD3_k127_4891202_4 Soluble lytic murein transglycosylase and related regulatory proteins K08309 - - 0.00000007535 66.0
BYD3_k127_4891202_5 - - - - 0.00004571 52.0
BYD3_k127_4913699_0 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 432.0
BYD3_k127_4913699_1 protein related to plant photosystem II stability assembly factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 377.0
BYD3_k127_4913699_2 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 327.0
BYD3_k127_4913699_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 317.0
BYD3_k127_4913699_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000802 302.0
BYD3_k127_4913699_5 Uncharacterized conserved protein (DUF2277) - - - 0.0000000000000000000000000000004808 132.0
BYD3_k127_4913699_6 Peptidase propeptide and YPEB domain - - - 0.000000000000000000000002979 105.0
BYD3_k127_4913699_7 ThiS family - - - 0.000000000000000000000467 110.0
BYD3_k127_4913699_8 PFAM Alkyl hydroperoxide reductase - - - 0.000004367 48.0
BYD3_k127_4941267_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 524.0
BYD3_k127_4941267_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000001319 230.0
BYD3_k127_4941267_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000005703 152.0
BYD3_k127_4941267_3 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000209 133.0
BYD3_k127_4964076_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 605.0
BYD3_k127_4964076_1 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 557.0
BYD3_k127_4964076_10 Uncharacterized conserved protein (COG2071) K09166 - - 0.00000000001936 72.0
BYD3_k127_4964076_11 acetyltransferase - - - 0.00000000004201 71.0
BYD3_k127_4964076_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 439.0
BYD3_k127_4964076_3 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002693 270.0
BYD3_k127_4964076_4 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0003674,GO:0003824,GO:0004073,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0019877,GO:0030312,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000469 265.0
BYD3_k127_4964076_5 Cysteine-rich domain K00241,K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000001216 272.0
BYD3_k127_4964076_6 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000001699 245.0
BYD3_k127_4964076_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000004854 158.0
BYD3_k127_4964076_8 Phosphoesterase K07098 - - 0.00000000000000000000000000000000009622 153.0
BYD3_k127_4964076_9 - - - - 0.0000000000000001261 95.0
BYD3_k127_4964089_0 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 502.0
BYD3_k127_4964089_1 FCD - - - 0.0000000000000000000000000000000000000000974 156.0
BYD3_k127_4964089_2 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000009714 134.0
BYD3_k127_4964089_3 COG0739 Membrane proteins related to metalloendopeptidases K06194,K12943 GO:0000920,GO:0001896,GO:0005575,GO:0005623,GO:0008150,GO:0008219,GO:0009279,GO:0009987,GO:0012501,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0043085,GO:0044093,GO:0044462,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071944 - 0.0000000000000000192 89.0
BYD3_k127_4964089_4 protein involved in exopolysaccharide biosynthesis - - - 0.0006473 51.0
BYD3_k127_4978436_0 Cellulose biosynthesis protein BcsQ K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005539 274.0
BYD3_k127_4978436_1 60Kd inner membrane protein K03217 - - 0.000000000000000000000000000000000000000000000001843 186.0
BYD3_k127_4978436_2 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000001839 167.0
BYD3_k127_4978436_3 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000898 138.0
BYD3_k127_4978436_4 PFAM Single-stranded nucleic acid binding R3H K06346 - - 0.00000000000000000000000000001374 122.0
BYD3_k127_4978436_5 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000002948 110.0
BYD3_k127_4978436_6 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00003926 48.0
BYD3_k127_4993483_0 Peptidase family M41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 353.0
BYD3_k127_4993483_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000007324 224.0
BYD3_k127_4993483_2 Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000000000000000000000000000002031 142.0
BYD3_k127_4993483_3 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000008828 127.0
BYD3_k127_4993483_4 PFAM peptidase M29, aminopeptidase II K19689 - - 0.000000002081 59.0
BYD3_k127_5065173_0 ATPases associated with a variety of cellular activities K02056,K06400 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 598.0
BYD3_k127_5065173_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0000150,GO:0000166,GO:0000287,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009650,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030145,GO:0030554,GO:0031668,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042148,GO:0042221,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046677,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 478.0
BYD3_k127_5065173_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 405.0
BYD3_k127_5065173_3 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008286 374.0
BYD3_k127_5065173_4 Basic membrane lipoprotein K07335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007032 331.0
BYD3_k127_5065173_5 Belongs to the CinA family K03742,K03743 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 310.0
BYD3_k127_5065173_6 Ftsk_gamma K03466 - - 0.00000000000000000000000000000000000000000004495 164.0
BYD3_k127_5065173_7 Domain of unknown function (DUF4115) - - - 0.00000000000000000000001485 111.0
BYD3_k127_5065173_8 LigT like Phosphoesterase K01975 - 3.1.4.58 0.0000000000000603 81.0
BYD3_k127_5069392_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000001182 138.0
BYD3_k127_5069392_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000117 93.0
BYD3_k127_5107709_0 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007063 388.0
BYD3_k127_5107709_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006149 378.0
BYD3_k127_5107709_2 lysyltransferase activity K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000233 264.0
BYD3_k127_5107709_3 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000004277 201.0
BYD3_k127_5107709_4 PFAM Cytochrome c oxidase caa3-type, assembly factor CtaG-related - - - 0.0000000000000000000000000000001478 133.0
BYD3_k127_5107709_5 Peptidase, M28 K19702 - 3.4.11.24 0.00000000000000004728 92.0
BYD3_k127_5107709_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000003344 77.0
BYD3_k127_5116036_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000009754 237.0
BYD3_k127_5116036_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.000000000000000000000000000000000000000000000000000000000000000002772 253.0
BYD3_k127_5116036_2 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.0000000000000000000000000000000000000008408 158.0
BYD3_k127_5116036_3 Uracil DNA glycosylase superfamily K03649 - 3.2.2.28 0.00000000000000000000000000000000000001199 152.0
BYD3_k127_5125715_0 cation diffusion facilitator family transporter K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000904 252.0
BYD3_k127_5125715_1 Putative modulator of DNA gyrase - - - 0.0000000000000000000000000000000000000000000000000008343 196.0
BYD3_k127_5125715_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000004371 109.0
BYD3_k127_5125715_3 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000001974 58.0
BYD3_k127_5141947_0 PFAM SMP-30 Gluconolaconase K14274 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002298 269.0
BYD3_k127_5141947_1 Catalyzes the NAD(P)( )-dependent oxidation of D-glucose to D-gluconate via gluconolactone. Can utilize both NAD( ) and NADP( ) as electron acceptor. Is involved in the degradation of glucose through a modified Entner-Doudoroff pathway K00068,K18124,K18125 GO:0000166,GO:0003674,GO:0003824,GO:0004344,GO:0005488,GO:0005515,GO:0005534,GO:0005536,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006012,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009987,GO:0016043,GO:0016052,GO:0016491,GO:0016614,GO:0016616,GO:0019318,GO:0019320,GO:0019388,GO:0019595,GO:0022607,GO:0030246,GO:0033498,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0043933,GO:0044085,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0046430,GO:0046872,GO:0046914,GO:0046983,GO:0047910,GO:0047936,GO:0048029,GO:0048037,GO:0050661,GO:0050662,GO:0051259,GO:0051262,GO:0051287,GO:0055114,GO:0065003,GO:0070401,GO:0070403,GO:0071704,GO:0071840,GO:0097159,GO:1901265,GO:1901363,GO:1901575 1.1.1.140,1.1.1.359,1.1.1.360 0.0000000000000000000000000000000000000000000000000000000000000000000000000002344 268.0
BYD3_k127_5141947_2 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001744 252.0
BYD3_k127_5141947_3 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000009198 232.0
BYD3_k127_5141947_4 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000001508 228.0
BYD3_k127_5141947_5 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000003975 221.0
BYD3_k127_5141947_6 - - - - 0.000000001946 61.0
BYD3_k127_5149079_0 Domain of unknown function (DUF1727) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005844 444.0
BYD3_k127_5149079_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 432.0
BYD3_k127_5149079_2 Aminotransferase class I and II K10206 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 427.0
BYD3_k127_5149079_3 Tetrahydrodipicolinate N-succinyltransferase N-terminal K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 351.0
BYD3_k127_5149079_4 Peptidase dimerisation domain K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 300.0
BYD3_k127_5149079_5 CobB/CobQ-like glutamine amidotransferase domain K07009 - - 0.00000000000000000000000000000000000000000000000000000000000000005794 250.0
BYD3_k127_5149079_6 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000000135 181.0
BYD3_k127_5149079_7 diguanylate cyclase - - - 0.000000000000000000000000000000002935 144.0
BYD3_k127_5149079_8 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000003765 116.0
BYD3_k127_5149079_9 Hydrolase, NUDIX family - - - 0.0000000000000008316 87.0
BYD3_k127_5216602_0 Belongs to the bacterial solute-binding protein 9 family K09818,K11707 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005038 393.0
BYD3_k127_5216602_1 PFAM ABC transporter related K11710 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003676 273.0
BYD3_k127_5216602_2 Diacylglycerol kinase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000007736 224.0
BYD3_k127_5216602_3 Transglycosylase SLT domain - - - 0.000000000000000000000000001383 121.0
BYD3_k127_5216602_4 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000841 107.0
BYD3_k127_5216602_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000002271 54.0
BYD3_k127_5219116_0 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009297 391.0
BYD3_k127_5219116_1 YmdB-like protein K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006219 261.0
BYD3_k127_5219116_3 Glycosyltransferase family 87 - - - 0.00000000000000008778 90.0
BYD3_k127_5220727_0 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K17763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 401.0
BYD3_k127_5220727_1 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000006394 244.0
BYD3_k127_5220727_2 Histidine kinase-like ATPases K17752 - 2.7.11.1 0.000000000000000000000000000000000000009271 149.0
BYD3_k127_5220727_3 transcriptional regulator - - - 0.0000000000000000000000000000001822 131.0
BYD3_k127_5220727_4 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K17762 - - 0.00000000000000000000000000002785 131.0
BYD3_k127_5220727_5 Stage II sporulation protein - - - 0.000000000000000000005728 97.0
BYD3_k127_5220727_6 - - - - 0.000000000004232 78.0
BYD3_k127_5220727_7 - - - - 0.00000000001455 70.0
BYD3_k127_5220727_8 protein conserved in bacteria - - - 0.00000003734 60.0
BYD3_k127_5252379_0 TIGRFAM phenylacetate-CoA oxygenase, PaaG subunit K02609 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 442.0
BYD3_k127_5252379_1 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 368.0
BYD3_k127_5252379_2 PFAM regulatory protein TetR - - - 0.000000000000000000000000000000000000000000000000000005557 195.0
BYD3_k127_5252379_3 TIGRFAM phenylacetate-CoA oxygenase, PaaJ subunit K02612 - - 0.000000000000000000000000000000000000000000000001065 188.0
BYD3_k127_5252379_4 PFAM phenylacetic acid catabolic family protein K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000118 176.0
BYD3_k127_5252379_5 Diacylglycerol kinase - - - 0.00000000000000000000000000000006086 141.0
BYD3_k127_5252379_6 phenylacetate catabolic process K02610 - - 0.00000000000000003157 85.0
BYD3_k127_5252379_7 Predicted membrane protein (DUF2339) - - - 0.00000001187 58.0
BYD3_k127_5259955_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 1.853e-266 829.0
BYD3_k127_5259955_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768,K01769 - 4.6.1.1,4.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005688 280.0
BYD3_k127_5259955_2 nitrate reductase, gamma subunit K00374 - 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001696 265.0
BYD3_k127_5259955_3 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002642 253.0
BYD3_k127_5259955_4 Nitrate reductase beta subunit K00371 - 1.7.5.1 0.0000000000000000000000000000000000000000000000000000001634 199.0
BYD3_k127_5259955_5 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000001142 212.0
BYD3_k127_5259955_6 Nitrate reductase delta subunit K00373 - - 0.000000000000000000000000000000000001833 152.0
BYD3_k127_5259955_7 Adenylyl- / guanylyl cyclase, catalytic domain K01768,K01769 - 4.6.1.1,4.6.1.2 0.00000000009428 74.0
BYD3_k127_5287364_0 Oligopeptide/dipeptide transporter, C-terminal region K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006072 378.0
BYD3_k127_5287364_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009691 364.0
BYD3_k127_5311665_0 PFAM Phenylalanine and histidine ammonia-lyase K01745,K10775 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009072,GO:0009698,GO:0009699,GO:0009800,GO:0009803,GO:0009987,GO:0016043,GO:0016053,GO:0016829,GO:0016840,GO:0016841,GO:0019438,GO:0019748,GO:0019752,GO:0022607,GO:0032787,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044550,GO:0045548,GO:0046394,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 4.3.1.24,4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 518.0
BYD3_k127_5311665_1 Urocanase C-terminal domain K01712 - 4.2.1.49 0.000000000000000000000000000000000000000000000000000000000000000000003804 257.0
BYD3_k127_5314314_0 heavy metal translocating P-type ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 517.0
BYD3_k127_5314314_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 365.0
BYD3_k127_5314314_10 Ethanolamine utilisation protein EutQ - - - 0.000002263 59.0
BYD3_k127_5314314_2 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 353.0
BYD3_k127_5314314_3 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000001641 201.0
BYD3_k127_5314314_4 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000002517 196.0
BYD3_k127_5314314_5 YceI-like domain - - - 0.00000000000000000000000000000000003211 141.0
BYD3_k127_5314314_6 COGs COG3593 ATP-dependent endonuclease of the OLD family K07459 - - 0.00000000000000000000000000001914 132.0
BYD3_k127_5314314_7 MarR family - - - 0.000000000000000001255 98.0
BYD3_k127_5314314_8 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000004918 65.0
BYD3_k127_5314314_9 Zinc carboxypeptidase - - - 0.0000000001566 66.0
BYD3_k127_5319479_0 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 437.0
BYD3_k127_5319479_1 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.00000000000000000000000000000000000001173 163.0
BYD3_k127_5327233_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 330.0
BYD3_k127_5327233_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 318.0
BYD3_k127_5327233_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 299.0
BYD3_k127_5327233_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005085,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0019899,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051020,GO:0065007,GO:0065009,GO:0071704,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000003899 193.0
BYD3_k127_5327233_4 diguanylate cyclase - - - 0.000000000000000000000004356 118.0
BYD3_k127_5336231_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007965 403.0
BYD3_k127_5336231_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 341.0
BYD3_k127_5336231_10 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000002239 120.0
BYD3_k127_5336231_11 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000001175 101.0
BYD3_k127_5336231_12 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000000000003525 77.0
BYD3_k127_5336231_13 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000358 63.0
BYD3_k127_5336231_2 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009434 252.0
BYD3_k127_5336231_3 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000000005416 224.0
BYD3_k127_5336231_4 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000001302 203.0
BYD3_k127_5336231_5 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000001343 168.0
BYD3_k127_5336231_6 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000002912 156.0
BYD3_k127_5336231_7 50S ribosomal protein L4 K02926 - - 0.0000000000000000000000000000000000000002111 162.0
BYD3_k127_5336231_8 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000000000000000005006 126.0
BYD3_k127_5336231_9 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000001629 124.0
BYD3_k127_5345108_0 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001046 276.0
BYD3_k127_5345108_1 Carbon-nitrogen hydrolase K11206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005109 277.0
BYD3_k127_5345108_2 CoA binding domain K06929 - - 0.0000000000000000000000000000001338 132.0
BYD3_k127_5345108_3 PFAM Haloacid dehalogenase domain protein hydrolase K07025 - - 0.00000000000000001 93.0
BYD3_k127_5345108_4 - - - - 0.000000000000003866 85.0
BYD3_k127_5345108_5 Cupin domain - - - 0.000000000005249 72.0
BYD3_k127_5393913_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003248 383.0
BYD3_k127_5393913_1 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000796 331.0
BYD3_k127_5393913_2 bifunctional deaminase-reductase domain protein - - - 0.0000000000000000000000000000000002042 134.0
BYD3_k127_5551495_0 VWA domain containing CoxE-like protein K07161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004938 318.0
BYD3_k127_5551495_1 Thioredoxin K05838 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000001727 148.0
BYD3_k127_5551495_2 OsmC-like protein - - - 0.0000000000000000000000000005352 123.0
BYD3_k127_5551495_3 SPTR Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07005 - - 0.0000000000000000000000001335 111.0
BYD3_k127_5551495_4 DNA-binding transcription factor activity - - - 0.000000000000000000008517 95.0
BYD3_k127_5551495_5 Peptidoglycan-binding domain 1 protein K01185,K17733 - 3.2.1.17 0.0000000000000000002402 98.0
BYD3_k127_5551495_6 Rhodanese Homology Domain - - - 0.0007889 49.0
BYD3_k127_5566468_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 478.0
BYD3_k127_5566468_1 DNA integrity scanning protein DisA K07067 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 372.0
BYD3_k127_5566468_2 CarD-like/TRCF domain K07736 - - 0.000000000000000000000000000000000000000000000000000000000000004392 221.0
BYD3_k127_5566468_3 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0000166,GO:0000287,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016020,GO:0016114,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0032787,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044464,GO:0046490,GO:0046872,GO:0046914,GO:0050518,GO:0051483,GO:0051484,GO:0070567,GO:0071704,GO:0071944,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901576 2.7.7.60 0.00000000000000000000000000000000000001152 159.0
BYD3_k127_5566468_4 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000001922 148.0
BYD3_k127_5566468_5 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000005599 127.0
BYD3_k127_5570776_0 Exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 529.0
BYD3_k127_5570776_1 His Kinase A (phospho-acceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006334 246.0
BYD3_k127_5570776_2 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000003447 167.0
BYD3_k127_5574618_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 391.0
BYD3_k127_5574618_1 FeoA K04758 - - 0.000000000000000000000000003221 116.0
BYD3_k127_5574618_2 PFAM FeoA family protein K04758 - - 0.00000000000000000000003491 107.0
BYD3_k127_5583880_0 Glycosyl transferases group 1 K13057 - 2.4.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 445.0
BYD3_k127_5583880_1 Glycosyl transferase, family 20 K00697 - 2.4.1.15,2.4.1.347 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009513 440.0
BYD3_k127_5583880_10 heme ABC exporter, ATP-binding protein CcmA K02193 - 3.6.3.41 0.00000000000000000000000000000000006786 152.0
BYD3_k127_5583880_11 EamA-like transporter family - - - 0.0000000000000000000000000000000002758 145.0
BYD3_k127_5583880_12 CcmB protein K02194 - - 0.0000000000000000000001988 110.0
BYD3_k127_5583880_13 Uroporphyrinogen-III synthase HemD K13542 - 2.1.1.107,4.2.1.75 0.000000000004971 78.0
BYD3_k127_5583880_14 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000001059 78.0
BYD3_k127_5583880_2 Belongs to the arginase family K01476 GO:0003674,GO:0003824,GO:0004053,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 3.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 334.0
BYD3_k127_5583880_3 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000002716 265.0
BYD3_k127_5583880_4 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002411 246.0
BYD3_k127_5583880_5 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000009887 210.0
BYD3_k127_5583880_6 Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000000003615 179.0
BYD3_k127_5583880_7 TIGRFAM molybdenum cofactor synthesis domain K03635 - 2.8.1.12 0.000000000000000000000000000000000000000006553 168.0
BYD3_k127_5583880_8 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000001754 161.0
BYD3_k127_5583880_9 Serine aminopeptidase, S33 K19311 GO:0003674,GO:0003824,GO:0005488,GO:0005504,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009062,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016042,GO:0016054,GO:0016298,GO:0016787,GO:0016788,GO:0019752,GO:0031406,GO:0032787,GO:0033293,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0071214,GO:0071467,GO:0071468,GO:0071704,GO:0072329,GO:0104004,GO:1901575 - 0.0000000000000000000000000000000000002256 151.0
BYD3_k127_5592694_0 integral membrane sensor signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 416.0
BYD3_k127_5592694_1 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003858 318.0
BYD3_k127_5592694_2 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001614 257.0
BYD3_k127_5592694_3 - - - - 0.0000002969 55.0
BYD3_k127_5598487_0 Protein of unknown function, DUF255 K06888 - - 5.207e-225 715.0
BYD3_k127_5598487_1 amine dehydrogenase activity K17285 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 403.0
BYD3_k127_5598487_2 NUDIX hydrolase K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 303.0
BYD3_k127_5598487_3 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 302.0
BYD3_k127_5598487_4 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 304.0
BYD3_k127_5598487_5 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000008557 217.0
BYD3_k127_5612033_0 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000524 284.0
BYD3_k127_5612033_1 AMP-binding enzyme C-terminal domain K01912 - 6.2.1.30 0.000000000000000000000375 105.0
BYD3_k127_5619916_0 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000001744 267.0
BYD3_k127_5619916_1 PFAM MgtC SapB transporter K07507 - - 0.000000000000000000000000000000000000000000005816 173.0
BYD3_k127_5619916_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000008702 158.0
BYD3_k127_5619916_3 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000002332 110.0
BYD3_k127_5619916_4 Belongs to the UPF0761 family K07058 - - 0.0000000000004596 79.0
BYD3_k127_5627163_0 Trk-type K transport K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 502.0
BYD3_k127_5627163_1 - - - - 0.000000000000000000000000000000000000000000000003514 188.0
BYD3_k127_5627163_2 TrkA-C domain K03499 - - 0.000000000000000000000000000001675 124.0
BYD3_k127_5627163_3 VanZ like family - - - 0.000002119 53.0
BYD3_k127_56349_0 glyoxalase bleomycin resistance protein dioxygenase K15975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 386.0
BYD3_k127_56349_1 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000005511 191.0
BYD3_k127_56349_2 RNB K12573 - - 0.00000000000000000000000000000000000000000000009769 173.0
BYD3_k127_5648901_0 Belongs to the aldehyde dehydrogenase family K22187 - - 4.738e-217 683.0
BYD3_k127_5648901_1 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 429.0
BYD3_k127_5648901_10 - - - - 0.00000000000000000021 97.0
BYD3_k127_5648901_12 - - - - 0.0000000000000131 78.0
BYD3_k127_5648901_2 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003506 264.0
BYD3_k127_5648901_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000001975 234.0
BYD3_k127_5648901_4 FtsZ-dependent cytokinesis - - - 0.000000000000000000000000000000000000000000000000000000000362 210.0
BYD3_k127_5648901_5 Elongation factor G, domain IV K02355 - - 0.00000000000000000000000000000000000000000000000000000003903 199.0
BYD3_k127_5648901_6 Belongs to the peptidase S41A family - - - 0.0000000000000000000000000000000000000002649 165.0
BYD3_k127_5648901_7 - - - - 0.00000000000000000000000000000004286 140.0
BYD3_k127_5648901_8 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000002115 119.0
BYD3_k127_5648901_9 RNase H - - - 0.00000000000000000003521 99.0
BYD3_k127_5661987_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 412.0
BYD3_k127_5661987_1 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 324.0
BYD3_k127_5661987_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 307.0
BYD3_k127_5661987_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003025 284.0
BYD3_k127_5661987_4 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003582 275.0
BYD3_k127_5661987_5 3-demethylubiquinone-9 3-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000008046 212.0
BYD3_k127_5661987_6 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000000009632 224.0
BYD3_k127_5667719_0 Sulfatase K01137 - 3.1.6.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 341.0
BYD3_k127_5667719_1 Arylsulfatase a K01133 - 3.1.6.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 327.0
BYD3_k127_5667719_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000000000000000000000000000002626 210.0
BYD3_k127_5667719_3 Transglycosylase SLT domain K08309 - - 0.000009705 49.0
BYD3_k127_5667845_0 PFAM Glucose Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 336.0
BYD3_k127_5667845_1 Homoserine dehydrogenase K00003,K12524 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 1.1.1.3,2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 325.0
BYD3_k127_5667845_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000002634 241.0
BYD3_k127_5671852_0 Glycosyl transferase 4-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 338.0
BYD3_k127_5671852_1 DALR_2 K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001656 289.0
BYD3_k127_5671852_2 Sigma-70 region 2 K03091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003564 259.0
BYD3_k127_5671852_3 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000008744 195.0
BYD3_k127_5671852_4 cation diffusion facilitator family transporter K16264 - - 0.000000000000000000000000005087 126.0
BYD3_k127_5671852_5 YacP-like NYN domain K06962 - - 0.00003168 53.0
BYD3_k127_5690111_0 LAO AO transport system ATPase K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 371.0
BYD3_k127_5690111_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 326.0
BYD3_k127_5690111_2 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 301.0
BYD3_k127_5690111_3 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.00000000000000000000000000000000000000006027 158.0
BYD3_k127_5690111_4 Putative diguanylate phosphodiesterase - - - 0.0000000006626 70.0
BYD3_k127_5709938_0 chromosome partitioning K02282 - - 0.0000000000000000000000000000000000000000000000000000000000007263 227.0
BYD3_k127_5709938_1 pilus assembly protein ATPase CpaF K02283 - - 0.0000000000000000000000000000003014 128.0
BYD3_k127_5709938_2 Pilus assembly protein K02279 - - 0.000006563 57.0
BYD3_k127_5716842_0 PFAM Cytochrome c assembly protein K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005275 266.0
BYD3_k127_5716842_1 CcmE - - - 0.00000000000000002458 87.0
BYD3_k127_5761801_0 General secretory system II, protein E domain protein K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000001789 244.0
BYD3_k127_5761801_1 Peptidase A24A, prepilin type IV K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000002842 190.0
BYD3_k127_5761801_2 - - - - 0.000000000000000000000004309 113.0
BYD3_k127_5761801_3 Cell motility and secretion Intracellular trafficking and secretion - - - 0.0000000001288 66.0
BYD3_k127_5774067_0 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000007059 232.0
BYD3_k127_5774067_1 COG1226 Kef-type K transport systems K10716 - - 0.00000000000000000000000000000000000000000000000002707 193.0
BYD3_k127_5778290_0 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 389.0
BYD3_k127_5778290_1 serine-type peptidase activity K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 326.0
BYD3_k127_5778290_2 PFAM Transketolase central region K00162 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 1.2.4.1 0.0000000000000000000000000000000000000000000000005185 177.0
BYD3_k127_5778290_3 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000292 168.0
BYD3_k127_5778290_4 CHRD domain - - - 0.00000000000000000000000000000000000708 144.0
BYD3_k127_5778290_5 Belongs to the thioredoxin family K03671 - - 0.00000000002627 67.0
BYD3_k127_578017_0 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 GO:0000287,GO:0003674,GO:0003824,GO:0004016,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009975,GO:0009987,GO:0016020,GO:0016829,GO:0016849,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0023052,GO:0030145,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0046058,GO:0046390,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052652,GO:0055086,GO:0065007,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004677 310.0
BYD3_k127_578017_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000000000000218 78.0
BYD3_k127_578017_2 Multicopper oxidase K06324 - 1.16.3.3 0.000000000001953 73.0
BYD3_k127_5806326_0 FAD linked oxidases, C-terminal domain K00102,K00104 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0033554,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 1.1.2.4,1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006987 583.0
BYD3_k127_5806326_1 FAD linked oxidases, C-terminal domain K11472 - - 0.0000000000000000000000000000000000000000003723 182.0
BYD3_k127_5806326_2 Fe-S oxidoreductase K11473 - - 0.00000000000000000000000000000000000008137 162.0
BYD3_k127_5806326_3 D-isomer specific 2-hydroxyacid dehydrogenase K00015 - 1.1.1.26 0.000000000000004291 76.0
BYD3_k127_5812493_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 392.0
BYD3_k127_5812493_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000000000634 203.0
BYD3_k127_5812493_2 AMP-dependent synthetase and ligase K01895 - 6.2.1.1 0.00000000000000000000000000000000002051 137.0
BYD3_k127_5814722_0 Cytochrome P450 - GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0005623,GO:0005886,GO:0006066,GO:0006629,GO:0006706,GO:0006707,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008395,GO:0009056,GO:0016020,GO:0016042,GO:0016125,GO:0016127,GO:0016491,GO:0016705,GO:0016709,GO:0036199,GO:0044238,GO:0044281,GO:0044282,GO:0044464,GO:0046164,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616,GO:1902652 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009771 483.0
BYD3_k127_5814722_1 KR domain - - - 0.00000000000000000000000000000000000000000000000001842 188.0
BYD3_k127_5828073_0 helix_turn_helix, Lux Regulon K07696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 341.0
BYD3_k127_5828073_1 Histidine kinase K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 334.0
BYD3_k127_5828073_10 transglycosylase associated protein - - - 0.000006089 53.0
BYD3_k127_5828073_11 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.00003587 57.0
BYD3_k127_5828073_12 - - - - 0.0002535 46.0
BYD3_k127_5828073_2 DNA methylase K00590 - 2.1.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 339.0
BYD3_k127_5828073_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005328 278.0
BYD3_k127_5828073_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000005919 229.0
BYD3_k127_5828073_5 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000000000000000000001431 173.0
BYD3_k127_5828073_6 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000001334 100.0
BYD3_k127_5828073_7 cyclic nucleotide binding K10914 - - 0.0000000000000000001504 97.0
BYD3_k127_5828073_8 - - - - 0.0000000001219 64.0
BYD3_k127_5828073_9 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000003289 65.0
BYD3_k127_583801_0 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 383.0
BYD3_k127_583801_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.000000000000000000000000000000000000000000000000000000003733 206.0
BYD3_k127_583801_2 methyltransferase activity K13307 - 2.1.1.235 0.00000000000000000000000000000000000000000000003227 178.0
BYD3_k127_5843507_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 556.0
BYD3_k127_5843507_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000001129 122.0
BYD3_k127_5849672_0 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 486.0
BYD3_k127_5849672_1 Anaerobic c4-dicarboxylate membrane transporter K07792 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 318.0
BYD3_k127_5855107_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 5.916e-262 846.0
BYD3_k127_5855107_1 Phosphorylase superfamily K00772,K03784 - 2.4.2.1,2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007328 297.0
BYD3_k127_5855107_10 Thioesterase K07107 - - 0.000000000000002736 85.0
BYD3_k127_5855107_2 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000004641 246.0
BYD3_k127_5855107_3 vancomycin resistance protein - - - 0.0000000000000000000000000000000000000000000000000000003188 216.0
BYD3_k127_5855107_4 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.000000000000000000000000000000000000000000000000005192 198.0
BYD3_k127_5855107_5 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000001461 172.0
BYD3_k127_5855107_6 Domain of unknown function (DUF4081) K06976 - - 0.0000000000000000000000000000004389 132.0
BYD3_k127_5855107_7 PFAM glycoside hydrolase family 3 K01207 - 3.2.1.52 0.000000000000000000000000189 117.0
BYD3_k127_5855107_8 Domain of unknown function (DUF4349) - - - 0.000000000000000000000008559 112.0
BYD3_k127_5855107_9 Acyl-CoA dehydrogenase, N-terminal domain K16173 - 1.3.99.32 0.00000000000000002025 83.0
BYD3_k127_5855627_0 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 428.0
BYD3_k127_5855627_1 Oligoendopeptidase f K01283 - 3.4.15.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 382.0
BYD3_k127_5855627_2 PHP-associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004197 259.0
BYD3_k127_5855627_3 Uracil DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000000000002196 201.0
BYD3_k127_5855627_4 EamA-like transporter family - - - 0.0000000000000000000000000000000000001732 152.0
BYD3_k127_5855627_5 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.00000000000000000000000000000000002888 154.0
BYD3_k127_5855627_6 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000617 139.0
BYD3_k127_5855627_7 PFAM Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000001285 122.0
BYD3_k127_5868118_0 Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009154 501.0
BYD3_k127_5868118_1 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 439.0
BYD3_k127_5868118_2 pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000838 403.0
BYD3_k127_5868118_3 - K06197 - - 0.0000000000000002659 85.0
BYD3_k127_5891657_0 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001063 286.0
BYD3_k127_5891657_1 Sir2 family K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000007711 237.0
BYD3_k127_5891657_2 - - - - 0.00000000000000000000000000000000000000000000000000000135 202.0
BYD3_k127_5891657_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000002927 184.0
BYD3_k127_5891657_4 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00001091 48.0
BYD3_k127_5894217_0 Pyridine nucleotide-disulphide oxidoreductase K21567 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003211 287.0
BYD3_k127_5894217_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000005219 231.0
BYD3_k127_5894217_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.000000000000000000000000000000000000000000001053 172.0
BYD3_k127_5894217_3 TIGRFAM iron-sulfur cluster assembly accessory protein - - - 0.000000000000000000000000000001225 128.0
BYD3_k127_5894217_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000007827 124.0
BYD3_k127_5894217_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000001266 98.0
BYD3_k127_5896816_0 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 291.0
BYD3_k127_5896816_1 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 GO:0000287,GO:0003674,GO:0003824,GO:0003848,GO:0005488,GO:0016740,GO:0016772,GO:0016778,GO:0043167,GO:0043169,GO:0046872 2.7.6.3 0.00000000000000000000000000000000002252 141.0
BYD3_k127_5896816_2 Protein of unknown function (DUF2469) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000002294 96.0
BYD3_k127_5918116_0 Integral membrane protein TerC family K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 361.0
BYD3_k127_5918116_1 guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000002494 176.0
BYD3_k127_5918116_2 BON domain - - - 0.00000001487 59.0
BYD3_k127_5918116_3 Lysylphosphatidylglycerol synthase TM region - - - 0.0000002512 58.0
BYD3_k127_5940372_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 354.0
BYD3_k127_5940372_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 294.0
BYD3_k127_5940372_2 amino acid - - - 0.000000000000000000000000000000000000000000000000000000000000000001347 246.0
BYD3_k127_5940372_3 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000003901 246.0
BYD3_k127_5940372_4 COG0346 Lactoylglutathione lyase and related lyases K07032 - - 0.0000000000000000000000000000000000000000000000000264 193.0
BYD3_k127_5940372_5 Protein of unknown function (DUF1361) - - - 0.0000000000000000000000000000000000000000002106 166.0
BYD3_k127_5940372_6 Flavin reductase like domain - - - 0.0000000000000000000000000000000000002167 145.0
BYD3_k127_5940372_7 Bacterial-like globin K06886 - - 0.000000000000000001481 100.0
BYD3_k127_5940372_8 PFAM fumarylacetoacetate (FAA) hydrolase K16164 - 3.7.1.5 0.0000000000002467 70.0
BYD3_k127_5952112_0 Cytochrome b K03887 - - 0.0000000000000000000000000000000000000000000005369 175.0
BYD3_k127_5952112_1 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 0.000000000000000000000000000000004648 131.0
BYD3_k127_5952112_2 Rieske 2Fe-2S - - - 0.00000000000000000000000007208 118.0
BYD3_k127_5973452_0 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 444.0
BYD3_k127_6031502_0 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000979 248.0
BYD3_k127_6031502_1 PFAM FecR protein - - - 0.000002286 60.0
BYD3_k127_6033816_0 DNA import into cell involved in transformation K02053 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006285 267.0
BYD3_k127_6033816_1 COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001476 269.0
BYD3_k127_6033816_2 PFAM binding-protein-dependent transport systems inner membrane component K02054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008533 253.0
BYD3_k127_6033816_3 Amidohydrolase family K01464 - 3.5.2.2 0.000000000000000000000000000000000000000000000000000004196 207.0
BYD3_k127_6068620_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 442.0
BYD3_k127_6068620_1 PFAM molybdopterin dehydrogenase, FAD-binding - - - 0.0000000000000000000000000000000000000000000000000000009968 198.0
BYD3_k127_6126844_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 617.0
BYD3_k127_6126844_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 449.0
BYD3_k127_6126844_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000192 216.0
BYD3_k127_6152319_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 634.0
BYD3_k127_6152319_1 PFAM regulatory protein LuxR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 625.0
BYD3_k127_6152319_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000005304 176.0
BYD3_k127_6178812_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 611.0
BYD3_k127_6178812_1 methyltransferase - - - 0.000000000000000000000001017 112.0
BYD3_k127_6191056_0 Clp domain protein K03696 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0008150,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030312,GO:0040007,GO:0042802,GO:0042803,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 530.0
BYD3_k127_6191056_1 3-beta hydroxysteroid dehydrogenase/isomerase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 369.0
BYD3_k127_6191056_10 membrane protein involved in the export of O-antigen and teichoic acid - - - 0.00000000000000327 89.0
BYD3_k127_6191056_11 O-Antigen ligase - - - 0.0000000000004209 82.0
BYD3_k127_6191056_2 CoA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 371.0
BYD3_k127_6191056_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 344.0
BYD3_k127_6191056_4 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000004607 246.0
BYD3_k127_6191056_5 Glycosyl transferase, family 2 K07011 - - 0.00000000000000000000000000000000000004268 163.0
BYD3_k127_6191056_6 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000003988 152.0
BYD3_k127_6191056_7 6-phospho-beta-galactosidase activity - - - 0.00000000000000000000000000000006471 143.0
BYD3_k127_6191056_8 Chain length determinant protein - - - 0.00000000000000000000000005058 125.0
BYD3_k127_6191056_9 PFAM PHP domain protein K01104 - 3.1.3.48 0.0000000000000000000000003235 122.0
BYD3_k127_6191171_0 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005245 332.0
BYD3_k127_6191171_1 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244 - 1.4.1.1,4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000007601 259.0
BYD3_k127_6191171_2 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000145 251.0
BYD3_k127_6191171_3 FeoA K03709 - - 0.000000000000000000000000000000000000000000000000000000004435 218.0
BYD3_k127_6191171_4 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000009973 186.0
BYD3_k127_6191171_5 Rieske [2Fe-2S] domain K00363 - 1.7.1.15 0.00000000000000001365 90.0
BYD3_k127_6218310_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 373.0
BYD3_k127_6218310_1 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008936 366.0
BYD3_k127_6218310_10 Subtilisin inhibitor-like - - - 0.0000000000000000000007615 108.0
BYD3_k127_6218310_11 Redoxin K03564 - 1.11.1.15 0.00000000000000000008036 104.0
BYD3_k127_6218310_12 Thioredoxin K03672 - 1.8.1.8 0.0000000000000001124 81.0
BYD3_k127_6218310_13 cAMP-dependent protein kinase regulator activity K04739 GO:0000003,GO:0000166,GO:0000187,GO:0000226,GO:0000280,GO:0001704,GO:0001707,GO:0001932,GO:0001933,GO:0001934,GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0003006,GO:0003008,GO:0003014,GO:0003091,GO:0003674,GO:0004857,GO:0004860,GO:0004862,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005929,GO:0005952,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006469,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007049,GO:0007143,GO:0007154,GO:0007162,GO:0007163,GO:0007165,GO:0007267,GO:0007268,GO:0007274,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007369,GO:0007389,GO:0007498,GO:0007507,GO:0007591,GO:0007596,GO:0007599,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007635,GO:0008103,GO:0008150,GO:0008152,GO:0008283,GO:0008285,GO:0008306,GO:0008355,GO:0008603,GO:0009611,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009798,GO:0009887,GO:0009888,GO:0009889,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009994,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010562,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010721,GO:0010738,GO:0010927,GO:0010948,GO:0014706,GO:0014855,GO:0015630,GO:0016020,GO:0016043,GO:0016310,GO:0016325,GO:0017076,GO:0019207,GO:0019210,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019932,GO:0019933,GO:0019935,GO:0019953,GO:0021700,GO:0022402,GO:0022407,GO:0022408,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030029,GO:0030036,GO:0030104,GO:0030154,GO:0030155,GO:0030234,GO:0030239,GO:0030291,GO:0030435,GO:0030551,GO:0030552,GO:0030554,GO:0030587,GO:0030951,GO:0030952,GO:0031032,GO:0031154,GO:0031156,GO:0031285,GO:0031288,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031399,GO:0031400,GO:0031401,GO:0031588,GO:0031594,GO:0031625,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032553,GO:0032555,GO:0032559,GO:0032870,GO:0032878,GO:0032944,GO:0032945,GO:0032989,GO:0032991,GO:0033002,GO:0033043,GO:0033673,GO:0033674,GO:0033762,GO:0034199,GO:0034236,GO:0035265,GO:0035556,GO:0036094,GO:0036211,GO:0040007,GO:0040020,GO:0042048,GO:0042060,GO:0042127,GO:0042129,GO:0042130,GO:0042221,GO:0042303,GO:0042325,GO:0042326,GO:0042327,GO:0042493,GO:0042592,GO:0042692,GO:0042802,GO:0042995,GO:0043085,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043434,GO:0043549,GO:0043900,GO:0043901,GO:0043934,GO:0043949,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044853,GO:0045121,GO:0045202,GO:0045214,GO:0045471,GO:0045595,GO:0045596,GO:0045786,GO:0045835,GO:0045859,GO:0045860,GO:0045936,GO:0045937,GO:0046006,GO:0046007,GO:0046677,GO:0048285,GO:0048332,GO:0048468,GO:0048469,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048520,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0048598,GO:0048599,GO:0048609,GO:0048646,GO:0048729,GO:0048731,GO:0048738,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050670,GO:0050672,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050795,GO:0050817,GO:0050863,GO:0050865,GO:0050866,GO:0050868,GO:0050877,GO:0050878,GO:0050890,GO:0050891,GO:0050896,GO:0051018,GO:0051093,GO:0051128,GO:0051129,GO:0051146,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051250,GO:0051252,GO:0051321,GO:0051338,GO:0051347,GO:0051348,GO:0051445,GO:0051447,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0055001,GO:0055002,GO:0055017,GO:0060038,GO:0060255,GO:0060259,GO:0060281,GO:0060283,GO:0060284,GO:0060419,GO:0060537,GO:0061061,GO:0061695,GO:0061939,GO:0065007,GO:0065008,GO:0065009,GO:0070663,GO:0070664,GO:0070887,GO:0070925,GO:0071310,GO:0071375,GO:0071377,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0071900,GO:0071901,GO:0071902,GO:0071944,GO:0072359,GO:0072375,GO:0080090,GO:0090036,GO:0090038,GO:0090702,GO:0097159,GO:0097305,GO:0097367,GO:0097435,GO:0097546,GO:0098589,GO:0098590,GO:0098772,GO:0098805,GO:0098857,GO:0098916,GO:0099120,GO:0099536,GO:0099537,GO:0120025,GO:0120038,GO:0140013,GO:1900193,GO:1900194,GO:1901265,GO:1901363,GO:1901564,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902911,GO:1903037,GO:1903038,GO:1903046,GO:1903429,GO:1903430,GO:1903506,GO:1903538,GO:1905879,GO:1905880,GO:1990234,GO:2000112,GO:2000114,GO:2000241,GO:2000242,GO:2000253,GO:2000479,GO:2000480,GO:2001141 - 0.00000000001591 71.0
BYD3_k127_6218310_14 WD40-like Beta Propeller Repeat K03641 - - 0.0000000006326 72.0
BYD3_k127_6218310_2 Beta-lactamase class C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 346.0
BYD3_k127_6218310_3 Formate/nitrite transporter K06212 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 312.0
BYD3_k127_6218310_4 AAA ATPase K06915 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000226 247.0
BYD3_k127_6218310_5 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000003596 258.0
BYD3_k127_6218310_6 Protein of unknown function (DUF4231) - - - 0.0000000000000000000000000000000000000001989 154.0
BYD3_k127_6218310_7 TIR domain - - - 0.00000000000000000000000000000000007475 153.0
BYD3_k127_6218310_8 polyketide cyclase - - - 0.0000000000000000000000000000000007466 145.0
BYD3_k127_6218310_9 - - - - 0.0000000000000000000000001587 115.0
BYD3_k127_6229274_0 Cytochrome c-type biogenesis protein CcmF C-terminal K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 327.0
BYD3_k127_6229274_1 Peptidase family M23 K21471 - - 0.00000000000000000000000000000000003092 148.0
BYD3_k127_6250442_0 Pyridoxal-dependent decarboxylase conserved domain K01580,K01593,K13745 - 4.1.1.105,4.1.1.15,4.1.1.28,4.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 390.0
BYD3_k127_6250442_1 proline dehydrogenase activity K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 300.0
BYD3_k127_6250442_10 - - - - 0.00000000008304 68.0
BYD3_k127_6250442_2 KR domain K10780 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.3.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000007864 257.0
BYD3_k127_6250442_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000006229 216.0
BYD3_k127_6250442_4 Histidine biosynthesis bifunctional protein HisIE K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000001313 179.0
BYD3_k127_6250442_5 Inositol monophosphatase K01092,K05602 GO:0000105,GO:0003674,GO:0003824,GO:0004401,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042578,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,3.1.3.25 0.000000000000000000000000000000000000002369 162.0
BYD3_k127_6250442_6 EamA-like transporter family - - - 0.0000000000000000000000000000000007035 143.0
BYD3_k127_6250442_7 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000266 133.0
BYD3_k127_6250442_8 HAD-superfamily hydrolase, subfamily IB, PSPase-like K08966 - 3.1.3.87 0.00000000000000000000000001641 117.0
BYD3_k127_6250442_9 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.0000000000000000000000007932 115.0
BYD3_k127_6324379_0 E1-E2 ATPase K01533 - 3.6.3.4 4.009e-292 913.0
BYD3_k127_6324379_1 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 331.0
BYD3_k127_6324379_2 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000001102 202.0
BYD3_k127_6324379_3 Endonuclease Exonuclease Phosphatase - - - 0.000000000000000000000000000000000000000000000004162 181.0
BYD3_k127_6324379_4 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000001389 151.0
BYD3_k127_6324379_5 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000000000000000000000003715 119.0
BYD3_k127_6324379_6 protein conserved in bacteria K21600 - - 0.000000000000000000000000005795 113.0
BYD3_k127_6343633_0 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007014 604.0
BYD3_k127_6343633_1 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000845 487.0
BYD3_k127_6343633_2 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 432.0
BYD3_k127_6343633_3 response to antibiotic K02066,K04749,K07122 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716 - 0.0000000000000000000004325 98.0
BYD3_k127_6386405_0 Permease for cytosine/purines, uracil, thiamine, allantoin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002283 291.0
BYD3_k127_6386405_1 PFAM FAD dependent oxidoreductase K00303 - 1.5.3.1 0.0000000000000000000000000000000000000000000000002026 180.0
BYD3_k127_6386405_3 Phosphoglycerate mutase family K02226,K22316 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 0.000000000002001 78.0
BYD3_k127_6386405_4 PASTA K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.0000004201 59.0
BYD3_k127_6412312_0 (2R)-phospho-3-sulfolactate synthase (ComA) K08097 - 4.4.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005921 310.0
BYD3_k127_6412312_1 L( )-tartrate dehydratase subunit beta K01678,K03780 - 4.2.1.2,4.2.1.32 0.000000000000000000000000000000000000000000000000000000000000000001005 233.0
BYD3_k127_6414533_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 439.0
BYD3_k127_6414533_1 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 392.0
BYD3_k127_6414533_2 ThiF family K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000004779 129.0
BYD3_k127_6414533_3 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000009723 121.0
BYD3_k127_6414533_4 Protein of unknown function (DUF1272) K09984 - - 0.000000000000002689 76.0
BYD3_k127_6414533_5 Tetratricopeptide repeat - - - 0.0009907 51.0
BYD3_k127_6454621_0 glutamine synthetase, type I K01915 - 6.3.1.2 2.11e-208 655.0
BYD3_k127_6454621_1 Belongs to the SEDS family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 410.0
BYD3_k127_6454621_10 Forkhead associated domain - - - 0.00000000000000000000504 98.0
BYD3_k127_6454621_11 - - - - 0.00000000000000000003232 104.0
BYD3_k127_6454621_12 Peptidase_C39 like family - - - 0.000000008854 62.0
BYD3_k127_6454621_2 Penicillin binding protein transpeptidase domain K05364 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005032 344.0
BYD3_k127_6454621_3 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 332.0
BYD3_k127_6454621_4 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000003311 279.0
BYD3_k127_6454621_5 Protein of unknown function (DUF2662) - - - 0.0000000000000000000000000000000000000000000000000000000001223 230.0
BYD3_k127_6454621_6 Histidine kinase K00936,K01719,K01768,K02030,K02584,K10441,K13924,K20962 - 2.1.1.80,2.7.13.3,3.1.1.61,3.1.4.52,3.6.3.17,4.2.1.75,4.6.1.1 0.000000000000000000000000000000000000000000000000000000003738 223.0
BYD3_k127_6454621_7 HNH nucleases - - - 0.0000000000000000000000000000000000000000000000003951 187.0
BYD3_k127_6454621_8 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000005601 192.0
BYD3_k127_6454621_9 Protein of unknown function (DUF4446) - - - 0.00000000000000000000000002138 115.0
BYD3_k127_6458134_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K07250 - 2.6.1.19,2.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 427.0
BYD3_k127_6458134_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 321.0
BYD3_k127_6458134_2 Belongs to the dCTP deaminase family K01494 GO:0003674,GO:0003824,GO:0004170,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0019239,GO:0033973,GO:0047429 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008031 275.0
BYD3_k127_6458134_3 3-beta hydroxysteroid dehydrogenase K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000002648 169.0
BYD3_k127_6481230_0 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 GO:0000287,GO:0003674,GO:0003824,GO:0003977,GO:0005488,GO:0008080,GO:0008150,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0019134,GO:0022610,GO:0030260,GO:0035635,GO:0040007,GO:0043167,GO:0043169,GO:0044403,GO:0044406,GO:0044409,GO:0044419,GO:0044650,GO:0046872,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0070569 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 402.0
BYD3_k127_6481230_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 342.0
BYD3_k127_6481230_2 - - - - 0.00000000000000001828 87.0
BYD3_k127_6481230_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00002552 51.0
BYD3_k127_6511179_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005776 471.0
BYD3_k127_6511179_1 Competence protein K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 302.0
BYD3_k127_6511179_2 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.000000000000000000000000000000000000000000000000000000000000000000003279 261.0
BYD3_k127_6511179_3 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.0000000000000002215 90.0
BYD3_k127_6511179_4 Ribosomal protein S20 K02968 - - 0.00000000003953 72.0
BYD3_k127_6520235_0 tRNA nucleotidyltransferase poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003975 533.0
BYD3_k127_6520235_1 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA K09772 - - 0.000000000000000000000000000000000000000000000000000000005416 207.0
BYD3_k127_6520235_10 YGGT family K02221 - - 0.0000000000106 68.0
BYD3_k127_6520235_2 Alanine racemase, N-terminal domain K06997 - - 0.0000000000000000000000000000000000000000000000004262 188.0
BYD3_k127_6520235_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000002121 190.0
BYD3_k127_6520235_4 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000001206 166.0
BYD3_k127_6520235_5 PFAM peptidase M50 - - - 0.000000000000000000000000000000000000005288 163.0
BYD3_k127_6520235_6 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000003378 143.0
BYD3_k127_6520235_7 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000002819 117.0
BYD3_k127_6520235_8 PFAM Prokaryotic dksA traR C4-type zinc finger - - - 0.0000000000000000006842 92.0
BYD3_k127_6520235_9 PFAM DivIVA family protein K04074 - - 0.000000000000003199 82.0
BYD3_k127_6527784_0 Protein of unknown function (DUF354) K09726 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 359.0
BYD3_k127_6527784_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000002339 250.0
BYD3_k127_6527784_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000005612 194.0
BYD3_k127_6527784_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109,K02113 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.000000000000000000006367 107.0
BYD3_k127_6527784_4 ATP synthase B/B' CF(0) K02109 - - 0.00000000000000000001759 98.0
BYD3_k127_6527784_5 ATP synthase subunit C K02110 - - 0.0000000000000000008824 99.0
BYD3_k127_6527784_6 Glycosyl transferase, family 4 K02851 - 2.7.8.33,2.7.8.35 0.000000000000000005371 88.0
BYD3_k127_6527784_7 Protein conserved in bacteria K09914 - - 0.0000000002492 74.0
BYD3_k127_6527784_8 - - - - 0.0007687 49.0
BYD3_k127_6531288_0 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000003277 173.0
BYD3_k127_6531288_1 - - - - 0.000000000000000000000000000000000003713 140.0
BYD3_k127_6531288_2 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000002339 105.0
BYD3_k127_6531288_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000001959 66.0
BYD3_k127_6531288_4 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K17828 - 1.3.1.14 0.00001884 48.0
BYD3_k127_6547852_0 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000183 193.0
BYD3_k127_6547852_1 response regulator - - - 0.0000000000000000000000000000000000000002973 153.0
BYD3_k127_6547852_2 Prolyl oligopeptidase family - - - 0.0003126 51.0
BYD3_k127_6549480_0 DNA primase, small subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008923 415.0
BYD3_k127_6549480_1 WYL domain - - - 0.00000000000000000000000003693 111.0
BYD3_k127_6549480_2 Histidine kinase - - - 0.000001863 60.0
BYD3_k127_6550565_0 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000001827 223.0
BYD3_k127_6550565_1 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000001319 225.0
BYD3_k127_6550565_2 O-antigen ligase like membrane protein - - - 0.0000000002319 65.0
BYD3_k127_6568288_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 334.0
BYD3_k127_6568288_1 ATPases associated with a variety of cellular activities K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 320.0
BYD3_k127_6568288_2 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000000000000000000000000000000000002872 184.0
BYD3_k127_6610609_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 GO:0008150,GO:0040007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 344.0
BYD3_k127_6610609_1 PFAM MerR family regulatory protein K22491 - - 0.0000000000000000000000000000002785 129.0
BYD3_k127_6610609_2 ChaB - - - 0.0000003193 53.0
BYD3_k127_6623117_0 4-hydroxyphenylacetate 3-hydroxylase N terminal K00483 - 1.14.14.9 8.145e-202 662.0
BYD3_k127_6623117_1 Belongs to the aldehyde dehydrogenase family K22445 - 1.2.99.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 601.0
BYD3_k127_6623117_10 Sulfite exporter TauE/SafE K07090 - - 0.0000000005658 64.0
BYD3_k127_6623117_11 PFAM flavin reductase domain protein, FMN-binding - - - 0.000000009055 68.0
BYD3_k127_6623117_2 e3 binding domain K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005897 309.0
BYD3_k127_6623117_3 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 312.0
BYD3_k127_6623117_4 Acetoacetate decarboxylase (ADC) K01574 - 4.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008796 293.0
BYD3_k127_6623117_5 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000004018 244.0
BYD3_k127_6623117_6 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03644,K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181,2.8.1.8 0.0000000000000000000000000000000000000000000000004195 194.0
BYD3_k127_6623117_7 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000000000000000001272 185.0
BYD3_k127_6623117_8 PFAM Peptidase family M23 K21472 - - 0.0000000000000000000000194 117.0
BYD3_k127_6623117_9 response to heat K07090 - - 0.0000000000002304 81.0
BYD3_k127_6659143_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 1.154e-263 836.0
BYD3_k127_6659143_1 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 323.0
BYD3_k127_6659143_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000004077 66.0
BYD3_k127_6666374_0 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 339.0
BYD3_k127_6666374_1 Formamidopyrimidine-DNA glycosylase H2TH domain - - - 0.0000000000000000000000000000000000000000000000002668 189.0
BYD3_k127_6666374_2 Calx-beta domain K01179,K01183 - 3.2.1.14,3.2.1.4 0.0000000000000000000000000000000000000001066 163.0
BYD3_k127_6666374_3 - - - - 0.000000000007288 78.0
BYD3_k127_6692463_0 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000984 317.0
BYD3_k127_6692463_1 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002907 284.0
BYD3_k127_6692463_2 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000008191 213.0
BYD3_k127_6692463_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000002291 198.0
BYD3_k127_6692463_4 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000001133 136.0
BYD3_k127_6692463_5 Evidence 5 No homology to any previously reported sequences - - - 0.0000000006728 68.0
BYD3_k127_6692463_6 ThiS family - - - 0.0002695 52.0
BYD3_k127_6702152_0 PFAM histone deacetylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 322.0
BYD3_k127_6702152_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000001455 96.0
BYD3_k127_6702152_2 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00003657 46.0
BYD3_k127_6728165_0 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 307.0
BYD3_k127_6728165_1 Transcriptional regulatory protein, C terminal K02483,K07658 - - 0.0000000000000000000000002832 122.0
BYD3_k127_6728165_2 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.0002978 52.0
BYD3_k127_6747209_0 Starch synthase catalytic domain - - - 2.777e-222 722.0
BYD3_k127_6747209_1 Pyridoxal-dependent decarboxylase conserved domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 535.0
BYD3_k127_6747209_10 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001974 289.0
BYD3_k127_6747209_11 B12 binding domain K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007227 273.0
BYD3_k127_6747209_12 ABC-type branched-chain amino acid transport systems ATPase component K01996,K11958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001105 272.0
BYD3_k127_6747209_13 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008526 276.0
BYD3_k127_6747209_14 HAD-hyrolase-like K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000005676 262.0
BYD3_k127_6747209_15 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000009535 190.0
BYD3_k127_6747209_16 Domain of unknown function (DUF378) - - - 0.00000000000000000000128 96.0
BYD3_k127_6747209_2 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007615 409.0
BYD3_k127_6747209_3 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 364.0
BYD3_k127_6747209_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 358.0
BYD3_k127_6747209_5 Phenazine biosynthesis PhzC PhzF protein K06998 - 5.3.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 340.0
BYD3_k127_6747209_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 316.0
BYD3_k127_6747209_7 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 331.0
BYD3_k127_6747209_8 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 300.0
BYD3_k127_6747209_9 Belongs to the binding-protein-dependent transport system permease family K01997,K11956 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000219 284.0
BYD3_k127_6870467_0 PFAM ABC transporter transmembrane region K06147,K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269 524.0
BYD3_k127_6870467_1 ABC transporter transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 494.0
BYD3_k127_6883800_0 ADP-L-glycero-beta-D-manno-heptose biosynthetic process K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 510.0
BYD3_k127_6883800_1 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006204 492.0
BYD3_k127_6883800_2 Belongs to the aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008696 449.0
BYD3_k127_6883800_3 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009166 402.0
BYD3_k127_6883800_4 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003206 248.0
BYD3_k127_6883800_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000009552 252.0
BYD3_k127_6885163_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 4.588e-209 663.0
BYD3_k127_6885163_1 MazG nucleotide pyrophosphohydrolase domain K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000001684 231.0
BYD3_k127_6885163_2 plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins K01802,K07533 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0006457,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.00000000000000000000000000001405 132.0
BYD3_k127_7011767_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 2.553e-244 764.0
BYD3_k127_7011767_1 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.00000000000000000000004891 115.0
BYD3_k127_704694_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03169 - 5.99.1.2 6.878e-302 942.0
BYD3_k127_704694_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003649 258.0
BYD3_k127_704694_2 nuclease activity K02335 GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000004394 222.0
BYD3_k127_704694_3 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000004886 136.0
BYD3_k127_7051273_0 tRNA rRNA methyltransferase, SpoU K03437 - - 0.00000000000000000000000000000002358 134.0
BYD3_k127_7051273_1 SnoaL-like domain - - - 0.000000000000000000000000001525 124.0
BYD3_k127_7051273_2 membrane protein (DUF2207) - - - 0.00000000000000005443 93.0
BYD3_k127_707022_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 405.0
BYD3_k127_707022_1 Sigma 54 modulation protein / S30EA ribosomal protein K05808 - - 0.00000000000000000000000000000000000000003611 158.0
BYD3_k127_707022_2 competence protein - - - 0.000000000000000000000000006123 119.0
BYD3_k127_707022_3 alpha beta alpha domain I K00966,K16881 - 2.7.7.13,5.4.2.8 0.00000000001028 69.0
BYD3_k127_7087218_0 1-aminocyclopropane-1-carboxylate deaminase K01505,K05396 - 3.5.99.7,4.4.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000001919 260.0
BYD3_k127_7087218_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000008675 207.0
BYD3_k127_7087218_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000003586 158.0
BYD3_k127_7087218_3 1-aminocyclopropane-1-carboxylate deaminase K01505,K05396 - 3.5.99.7,4.4.1.15 0.0000000000000000000000000000000000000396 143.0
BYD3_k127_710342_0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009966 570.0
BYD3_k127_710342_1 Protein of unknown function (DUF1385) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001439 282.0
BYD3_k127_710342_2 Electron transfer flavoprotein domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002364 273.0
BYD3_k127_710342_3 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000001638 224.0
BYD3_k127_710342_4 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000004859 161.0
BYD3_k127_710342_5 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000003962 117.0
BYD3_k127_7149890_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008171 384.0
BYD3_k127_7149890_1 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004895 394.0
BYD3_k127_7149890_2 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 308.0
BYD3_k127_7149890_3 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 326.0
BYD3_k127_7149890_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001006 258.0
BYD3_k127_7149890_5 ABC transporter substrate-binding protein K15580 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000005128 209.0
BYD3_k127_7149890_6 extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000006487 185.0
BYD3_k127_7149890_7 Belongs to the ABC transporter superfamily K10823 - - 0.000000000000001387 89.0
BYD3_k127_7181644_0 Mandelate Racemase Muconate Lactonizing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 344.0
BYD3_k127_7181644_1 Belongs to the peptidase M50B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 299.0
BYD3_k127_7181644_2 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000001724 130.0
BYD3_k127_7197374_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11779,K11784 - 1.21.98.1,2.5.1.77 3.641e-308 970.0
BYD3_k127_7197374_1 Animal haem peroxidase - - - 2.909e-231 730.0
BYD3_k127_7197374_10 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 - 2.7.7.68 0.000000000000000004067 93.0
BYD3_k127_7197374_11 - - - - 0.0000000000000003071 92.0
BYD3_k127_7197374_2 FAD linked oxidases, C-terminal domain K00102,K11472 - 1.1.2.4 5.866e-228 717.0
BYD3_k127_7197374_3 4Fe-4S dicluster domain - - - 3.622e-203 640.0
BYD3_k127_7197374_5 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 521.0
BYD3_k127_7197374_6 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005363 437.0
BYD3_k127_7197374_7 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.0000000000000000000000000000000000000000000000000000000000000000000002431 244.0
BYD3_k127_7197374_8 Pyridoxamine 5'-phosphate oxidase - - - 0.0000000000000000000000000000000000000002157 153.0
BYD3_k127_7197374_9 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000657 122.0
BYD3_k127_7202200_0 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000001613 195.0
BYD3_k127_7202200_1 PFAM ABC transporter K02003 - - 0.000000000000000000000000000000000000000001446 174.0
BYD3_k127_7202200_2 efflux transmembrane transporter activity K02004 - - 0.000004848 55.0
BYD3_k127_7210840_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003355 283.0
BYD3_k127_7210840_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000001737 216.0
BYD3_k127_7210840_2 PFAM ABC transporter related K02003 - - 0.000009148 60.0
BYD3_k127_7211550_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 2.731e-203 652.0
BYD3_k127_7211550_1 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 351.0
BYD3_k127_7211550_2 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007419 298.0
BYD3_k127_7211550_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000133 176.0
BYD3_k127_7211550_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000002298 126.0
BYD3_k127_7211550_5 Protein conserved in bacteria K09764 - - 0.00000000000000002673 85.0
BYD3_k127_7211550_6 Nucleic-acid-binding protein implicated in transcription termination K02600,K07742 - - 0.000000001228 69.0
BYD3_k127_7224455_0 Phosphohydrolase-associated domain K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009809 374.0
BYD3_k127_7224455_1 DNA polymerase X K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 347.0
BYD3_k127_7224455_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 334.0
BYD3_k127_7224455_3 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004424 232.0
BYD3_k127_7224455_4 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000004105 173.0
BYD3_k127_7224455_5 PFAM Phosphoglycerate mutase K02226,K22305 - 3.1.3.3,3.1.3.73 0.0000000000000000000000000000000000000008062 157.0
BYD3_k127_7224455_6 Unextendable partial coding region - - - 0.0000000000000002905 79.0
BYD3_k127_7224455_7 Cysteine-rich secretory protein family - - - 0.0000000000008157 79.0
BYD3_k127_7251841_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00596 - 4.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008721 511.0
BYD3_k127_7251841_1 enoyl-CoA hydratase K13766,K15312 - 4.2.1.18 0.0000000000000000000008529 110.0
BYD3_k127_7257863_0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 1.947e-303 935.0
BYD3_k127_7257863_1 cellular response to starvation - GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042594,GO:0050896,GO:0051716,GO:0071496 - 0.0000005936 57.0
BYD3_k127_7276097_0 Bacterial protein of unknown function (DUF839) K07093 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007173 458.0
BYD3_k127_7276097_1 Transmembrane secretion effector K18215 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 387.0
BYD3_k127_7276097_2 Transmembrane secretion effector K18215 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 361.0
BYD3_k127_7276097_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 338.0
BYD3_k127_7276097_4 Glucose inhibited division protein A K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006373 288.0
BYD3_k127_7276097_5 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000000001826 186.0
BYD3_k127_7276097_6 Type VI secretion system effector, Hcp K11903 - - 0.000000000000000000000000000000000005507 141.0
BYD3_k127_7276097_7 Fumarate hydratase (Fumerase) K01677 - 4.2.1.2 0.0000000000000000000001715 112.0
BYD3_k127_7305475_0 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 288.0
BYD3_k127_7305475_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000805 201.0
BYD3_k127_7305475_2 transport, permease protein K01990,K01992 - - 0.000000000000000000000000000000000000000000000000000004118 213.0
BYD3_k127_7311615_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.0000000000000000000000000000000001305 138.0
BYD3_k127_7311615_1 GAF domain - - - 0.0000000000000006142 92.0
BYD3_k127_7318682_0 PFAM Endonuclease Exonuclease phosphatase K07004 - - 2.979e-206 703.0
BYD3_k127_7318682_1 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 531.0
BYD3_k127_7318682_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 387.0
BYD3_k127_7318682_3 phosphatase K01083,K07004 - 3.1.3.8 0.0000000000000000000000000000000000000000000000000000000000000001418 255.0
BYD3_k127_7318682_4 IPP transferase K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000001459 213.0
BYD3_k127_7319083_0 Acyl-CoA dehydrogenase, C-terminal domain K00248,K00249 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.3.8.1,1.3.8.7 0.0000000000000000000000000001057 124.0
BYD3_k127_7322427_0 Adenosine specific kinase K09129 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008013 256.0
BYD3_k127_7322427_1 ZIP Zinc transporter - - - 0.0000000000000000000000000000000000000000007771 169.0
BYD3_k127_7322427_2 DoxX - - - 0.000000000000000000000000000000388 125.0
BYD3_k127_7322427_3 Polymer-forming cytoskeletal - - - 0.000001529 50.0
BYD3_k127_732585_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000001035 239.0
BYD3_k127_732585_1 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000003245 227.0
BYD3_k127_732585_2 Belongs to the TrpC family K01609 - 4.1.1.48 0.00000000000000439 87.0
BYD3_k127_7359542_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 1.05e-208 658.0
BYD3_k127_7359542_1 PFAM transferase hexapeptide repeat containing protein K16881 - 2.7.7.13,5.4.2.8 3.347e-197 666.0
BYD3_k127_7359542_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006557 330.0
BYD3_k127_7359542_3 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004601 284.0
BYD3_k127_7359542_4 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 GO:0000287,GO:0003674,GO:0003824,GO:0004735,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019752,GO:0030145,GO:0040007,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000002022 268.0
BYD3_k127_7359542_5 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001156 252.0
BYD3_k127_7359542_6 Forkhead associated domain - - - 0.00000000000000000000000000002708 120.0
BYD3_k127_7359542_7 CDP-alcohol phosphatidyltransferase K00995,K08744 GO:0003674,GO:0003824,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.00000000000000000000007643 108.0
BYD3_k127_7359542_8 - - - - 0.00000000000000003095 84.0
BYD3_k127_7381628_0 Carbamoyl-phosphate synthetase ammonia chain K01955 GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 587.0
BYD3_k127_7381628_1 TIGRFAM carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.000000002177 59.0
BYD3_k127_7406314_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 1.913e-267 848.0
BYD3_k127_7406314_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004772 594.0
BYD3_k127_7406314_10 Cupin 2, conserved barrel domain protein K21700 - - 0.0000000000000000003141 91.0
BYD3_k127_7406314_11 Lytic transglycolase - - - 0.00000001074 62.0
BYD3_k127_7406314_12 Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B) K04757 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 2.7.11.1 0.00006275 53.0
BYD3_k127_7406314_2 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 377.0
BYD3_k127_7406314_3 Sigma-70 region 3 K03090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001229 257.0
BYD3_k127_7406314_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000134 259.0
BYD3_k127_7406314_5 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000001379 175.0
BYD3_k127_7406314_6 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000001864 168.0
BYD3_k127_7406314_7 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.000000000000000000000000000000000001802 141.0
BYD3_k127_7406314_8 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000007207 102.0
BYD3_k127_7406314_9 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.000000000000000000001062 108.0
BYD3_k127_7414227_0 RNB K12573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007649 443.0
BYD3_k127_7414227_1 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001694 242.0
BYD3_k127_7414227_2 Domain of unknown function (DUF3427) - - - 0.000000000000000000000000000000000000000000000000000000000000002345 221.0
BYD3_k127_7414227_3 menaquinone-dependent protoporphyrinogen oxidase activity K00230 - 1.3.5.3 0.000000000000000000000000000000000001081 150.0
BYD3_k127_7414227_4 RDD family - - - 0.0000000000000000000000000000003696 134.0
BYD3_k127_7414227_5 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.0000000000000000000002338 106.0
BYD3_k127_7434866_0 Mycolic acid cyclopropane synthetase K00574,K20238 - 2.1.1.317,2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000863 456.0
BYD3_k127_7434866_1 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000001439 236.0
BYD3_k127_7455157_0 Ribonuclease E/G family K08301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003867 562.0
BYD3_k127_7455157_1 Belongs to the SEDS family K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006256 291.0
BYD3_k127_7455157_2 Penicillin-binding protein dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000001341 185.0
BYD3_k127_7473249_0 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000001921 226.0
BYD3_k127_7473249_1 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.000000000000000000000000008169 117.0
BYD3_k127_7484405_0 xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005035 333.0
BYD3_k127_7484405_1 XdhC Rossmann domain K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 331.0
BYD3_k127_7484405_2 COGs COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS CutS homologs K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000049 238.0
BYD3_k127_7484405_3 carbon monoxide dehydrogenase subunit G K09386 - - 0.0000000000000000000000000000000000008226 157.0
BYD3_k127_7512868_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 2.524e-244 784.0
BYD3_k127_7512868_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007711 569.0
BYD3_k127_7512868_10 Alkylmercury lyase - - - 0.00000000000234 69.0
BYD3_k127_7512868_2 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 473.0
BYD3_k127_7512868_3 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006325 349.0
BYD3_k127_7512868_4 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008840,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000208 263.0
BYD3_k127_7512868_5 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000005661 225.0
BYD3_k127_7512868_6 geranylgeranyl reductase - - - 0.0000000000000000000000000000000000000000000000000000003262 209.0
BYD3_k127_7512868_7 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000482 182.0
BYD3_k127_7512868_8 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000004325 130.0
BYD3_k127_7512868_9 Alkylmercury lyase - - - 0.0000000000000000000614 96.0
BYD3_k127_7534935_0 Belongs to the GcvT family K00302 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 404.0
BYD3_k127_7534935_1 Sarcosine oxidase, delta subunit family K00304 - 1.5.3.1 0.00000000000000041 82.0
BYD3_k127_7536539_0 Belongs to the phosphoglycerate mutase family K15634 - 5.4.2.12 0.00000000000000000000000000000000000006323 158.0
BYD3_k127_7536539_1 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.00000000000000000000000000000000003916 140.0
BYD3_k127_7536539_2 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000000000001602 118.0
BYD3_k127_7536539_3 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.00000000000000000000000003367 109.0
BYD3_k127_7548115_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 4.677e-240 755.0
BYD3_k127_7548115_1 - - - - 0.000000000000000000000000000000000000000000000000002594 196.0
BYD3_k127_7548115_2 metallophosphoesterase - - - 0.00000000000000000000001902 104.0
BYD3_k127_7565366_0 lysR family - - - 0.00000000000000000000000000000000000000000000000000000003252 211.0
BYD3_k127_7565366_1 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000001069 152.0
BYD3_k127_7565366_2 membrane K07149 - - 0.000000000000000000000000000000000005158 145.0
BYD3_k127_7565366_3 AraC-like ligand binding domain - - - 0.00000000000000000006381 91.0
BYD3_k127_7578327_0 TIGRFAM Hopanoid biosynthesis associated radical SAM protein HpnH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008445 334.0
BYD3_k127_7578327_1 Squalene--hopene cyclase K06045 - 4.2.1.129,5.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009223 279.0
BYD3_k127_7578327_2 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000004617 229.0
BYD3_k127_7578327_3 Pfam:DUF422 - - - 0.000375 53.0
BYD3_k127_7583790_0 ATPsynthase alpha/beta subunit N-term extension K02117 - 3.6.3.14,3.6.3.15 2.791e-203 654.0
BYD3_k127_7583790_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 586.0
BYD3_k127_7583790_2 V-type ATPase 116kDa subunit family K02123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 410.0
BYD3_k127_7583790_3 - - - - 0.000000000000000000000000000000000000000000000000000000001606 217.0
BYD3_k127_7583790_4 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000282 147.0
BYD3_k127_7583790_5 ATP synthase subunit C K02124 - - 0.000000000000000000000000005201 123.0
BYD3_k127_7583790_6 ATP synthase subunit D K02120 - - 0.0000000000000000003035 96.0
BYD3_k127_7583790_7 - - - - 0.00003399 52.0
BYD3_k127_7597413_0 Fungalysin metallopeptidase (M36) - - - 0.0 1037.0
BYD3_k127_7597413_1 Fungalysin metallopeptidase (M36) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003762 274.0
BYD3_k127_7597413_2 Fungalysin metallopeptidase (M36) - - - 0.000005563 50.0
BYD3_k127_7601638_0 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 353.0
BYD3_k127_7601638_1 Rieske 2Fe-2S K00499 - 1.14.15.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007913 366.0
BYD3_k127_7601638_2 Thioesterase superfamily K07107 - - 0.0000000000000000000007188 99.0
BYD3_k127_7601638_3 Flavin containing amine oxidoreductase K00274,K03343 - 1.4.3.10,1.4.3.4 0.00000000000000001106 83.0
BYD3_k127_7606242_0 TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 466.0
BYD3_k127_7606242_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 452.0
BYD3_k127_7606242_2 ATP dependent DNA ligase C terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001307 279.0
BYD3_k127_7606242_3 HAD-hyrolase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000215 235.0
BYD3_k127_7606242_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000006304 89.0
BYD3_k127_7606242_5 Repeats in polycystic kidney disease 1 (PKD1) and other proteins K01126,K01181 - 3.1.4.46,3.2.1.8 0.0000000000000006139 87.0
BYD3_k127_7606242_6 PA26 p53-induced protein (sestrin) - - - 0.0000000000001726 82.0
BYD3_k127_7606242_7 PA14 domain - - - 0.0001203 51.0
BYD3_k127_7647208_0 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 580.0
BYD3_k127_7647208_1 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000004267 184.0
BYD3_k127_7647208_2 response regulator - - - 0.000000000000000000000000000000001776 150.0
BYD3_k127_7647208_3 histidine kinase A domain protein - - - 0.0000007921 62.0
BYD3_k127_7656822_0 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 314.0
BYD3_k127_7656822_1 Transketolase, pyrimidine binding domain K21417 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 297.0
BYD3_k127_7656822_2 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000002962 246.0
BYD3_k127_7656822_3 lactoylglutathione lyase activity - - - 0.0005704 48.0
BYD3_k127_7664086_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009983 593.0
BYD3_k127_7664086_1 Glycine cleavage system P-protein K00282 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006846 437.0
BYD3_k127_7664086_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000000000000004565 199.0
BYD3_k127_7664086_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000003909 155.0
BYD3_k127_7664086_4 AraC-like ligand binding domain - - - 0.000000000000000000000000000000001365 148.0
BYD3_k127_7691925_0 Ribonuclease B OB domain K03704 - - 0.0000000000000000000000006362 105.0
BYD3_k127_7691925_1 - - - - 0.0002708 49.0
BYD3_k127_7691925_2 Acetyltransferase (GNAT) domain - - - 0.0005948 42.0
BYD3_k127_7701501_0 Transketolase, pyrimidine binding domain K00167 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 407.0
BYD3_k127_7701501_1 Dehydrogenase E1 component K00161,K00166,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 326.0
BYD3_k127_7701501_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 304.0
BYD3_k127_7701501_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 295.0
BYD3_k127_7701501_4 ASCH domain - - - 0.0000000000000000000000000000000000004286 147.0
BYD3_k127_7701501_5 NUDIX domain - - - 0.00000000000000000000000000000000001071 142.0
BYD3_k127_7701501_6 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005504,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0008289,GO:0009405,GO:0009987,GO:0015036,GO:0016020,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0030312,GO:0031405,GO:0031406,GO:0032991,GO:0033293,GO:0036094,GO:0040007,GO:0042592,GO:0043167,GO:0043168,GO:0043177,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0045454,GO:0048037,GO:0050662,GO:0050789,GO:0050794,GO:0051704,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0097159,GO:1901363,GO:1901681,GO:1902494,GO:1990204 2.3.1.61 0.00000000000000000000000000000001471 133.0
BYD3_k127_7701501_7 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0019899,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0035375,GO:0035966,GO:0040007,GO:0042221,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046872,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065007,GO:0071944,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000003316 123.0
BYD3_k127_777023_0 Arsenical pump membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 424.0
BYD3_k127_777023_1 Bile acid-inducible L-carnitine dehydratase protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 370.0
BYD3_k127_777023_2 PFAM Squalene phytoene synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000004787 239.0
BYD3_k127_777023_3 PFAM sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000266 223.0
BYD3_k127_777023_4 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000001106 199.0
BYD3_k127_777023_5 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.0000000000000000000000000000000000000000000000000003371 199.0
BYD3_k127_777023_6 pyridoxamine 5-phosphate - - - 0.000000000000000000000000001177 130.0
BYD3_k127_777023_7 phytoene synthase K02291 GO:0003674,GO:0003824,GO:0004337,GO:0004659,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016740,GO:0016765,GO:0016767,GO:0042440,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046148,GO:0071704,GO:1901576 2.5.1.32,2.5.1.99 0.000000000000000000000003287 117.0
BYD3_k127_7797223_0 MMPL family - - - 3.573e-197 638.0
BYD3_k127_7797223_1 PFAM Amidohydrolase 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009792 366.0
BYD3_k127_7797223_2 PFAM peptidase M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009058 335.0
BYD3_k127_7797223_3 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000004617 130.0
BYD3_k127_7843245_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 4.129e-252 781.0
BYD3_k127_7843245_1 Bacterial regulatory protein, Fis family K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 591.0
BYD3_k127_7847834_0 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 4.964e-304 951.0
BYD3_k127_7847834_1 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000005947 211.0
BYD3_k127_7847834_2 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000003521 172.0
BYD3_k127_7865994_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K01281 - 3.4.14.11 6.207e-222 708.0
BYD3_k127_7865994_1 Endonuclease NucS K07503 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 320.0
BYD3_k127_7865994_2 alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000009816 256.0
BYD3_k127_7865994_3 dehydratase - - - 0.000000000000000000000000000000000000000000000000000552 187.0
BYD3_k127_7865994_4 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K00657,K07023 - 2.3.1.57 0.0000000000000000000000000000000000000000000000000143 189.0
BYD3_k127_7865994_5 Cleaves both 3' and 5' ssDNA extremities of branched DNA structures K07503 - - 0.0000000000000001567 81.0
BYD3_k127_7865994_6 Luciferase-like monooxygenase - - - 0.000000000000003401 75.0
BYD3_k127_7865994_7 - - - - 0.00008324 55.0
BYD3_k127_7879475_0 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 475.0
BYD3_k127_7879475_1 Belongs to the LDH MDH superfamily. LDH family K00016,K00024 - 1.1.1.27,1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 398.0
BYD3_k127_7879475_2 Alanine-glyoxylate amino-transferase K03710,K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 294.0
BYD3_k127_7879475_3 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000004591 228.0
BYD3_k127_7879475_4 Belongs to the peptidase S16 family K07177 - - 0.0000000000000000000000000000000000000000000562 173.0
BYD3_k127_7879475_5 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000395 161.0
BYD3_k127_790389_0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 413.0
BYD3_k127_790389_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000000000000000000006105 142.0
BYD3_k127_7908302_0 Carbamoyltransferase C-terminus K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 575.0
BYD3_k127_7908302_1 HAD-hyrolase-like K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 315.0
BYD3_k127_7912928_0 TIGRFAM aminoacyl-histidine dipeptidase K01270 - - 0.0000000000000000000000000000000000000000000000000000004932 201.0
BYD3_k127_7912928_1 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000009385 158.0
BYD3_k127_7912928_2 - - - - 0.00000000000000000000000000000000001932 141.0
BYD3_k127_7912928_3 AI-2E family transporter - - - 0.00000000000000000000000007854 124.0
BYD3_k127_7922126_0 PFAM acyl-CoA dehydrogenase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009317 537.0
BYD3_k127_7922126_1 Belongs to the arginase family K01480,K18459 - 3.5.3.11,3.5.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000909 462.0
BYD3_k127_7922126_2 Bacterial sugar transferase K19428 - - 0.00000000000000000000000000000000000000000000000000000000000000000000481 241.0
BYD3_k127_7922126_3 Non-ribosomal peptide synthetase modules and related proteins K13611 - - 0.000000000000000000000000000000000000003238 156.0
BYD3_k127_7922126_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.00000000000008618 75.0
BYD3_k127_7926044_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 520.0
BYD3_k127_7926044_1 PFAM molybdopterin dehydrogenase, FAD-binding K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 349.0
BYD3_k127_7926044_2 Cobalamin-independent synthase, Catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004961 261.0
BYD3_k127_7926044_3 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000017 223.0
BYD3_k127_7926044_4 MobA-Related Protein K07141 - 2.7.7.76 0.0000000000000000000000000005753 122.0
BYD3_k127_7933235_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 582.0
BYD3_k127_7933235_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 512.0
BYD3_k127_7933235_2 Capsule synthesis protein K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000193 286.0
BYD3_k127_7933235_3 Carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000001757 205.0
BYD3_k127_7933235_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000002287 181.0
BYD3_k127_7933235_5 MOSC N-terminal beta barrel domain - - - 0.000000000000000000000000000000000000000000000367 176.0
BYD3_k127_7933235_6 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000003426 85.0
BYD3_k127_7940331_0 Glycosyl Transferase - - - 4.442e-319 999.0
BYD3_k127_7940331_1 phosphorelay signal transduction system K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 515.0
BYD3_k127_7940331_2 PFAM regulatory protein TetR - - - 0.00000000000000000000000000000000000000000000000000000000173 206.0
BYD3_k127_7940331_3 Protein of unknown function (DUF3455) - - - 0.0000000000000000000000009832 110.0
BYD3_k127_7940331_4 - - - - 0.000000001205 67.0
BYD3_k127_7964069_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 509.0
BYD3_k127_7964069_1 Glutamine amidotransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002253 275.0
BYD3_k127_7964069_2 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000005308 136.0
BYD3_k127_7984451_0 Helix-hairpin-helix motif K14162 - 2.7.7.7 8.854e-302 947.0
BYD3_k127_7990598_0 Drug exporters of the RND superfamily K06994,K07003 - - 6.322e-217 694.0
BYD3_k127_7990598_1 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 359.0
BYD3_k127_7990598_2 6-phosphogluconolactonase activity - - - 0.000000000000000000000000000000000000000000005854 176.0
BYD3_k127_7990598_4 Transcriptional regulator - - - 0.000004807 51.0
BYD3_k127_8001498_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000001785 227.0
BYD3_k127_8001498_1 Lactonase, 7-bladed beta-propeller - - - 0.00000000000000000000000000000000000000000000000000000000000541 225.0
BYD3_k127_8001498_2 Putative zinc-finger - - - 0.000004739 52.0
BYD3_k127_8001678_0 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 427.0
BYD3_k127_8001678_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004345 281.0
BYD3_k127_8001678_2 Prokaryotic diacylglycerol kinase K00887,K00901 - 2.7.1.107,2.7.1.66 0.0000000000000000000000000000000000000000000000000007224 201.0
BYD3_k127_8001678_3 Histidine triad (Hit) protein K02503 - - 0.00000000000000000000000001052 112.0
BYD3_k127_8001678_4 Yqey-like protein K09117 - - 0.0000000000000000000000001577 114.0
BYD3_k127_8001678_5 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.0000000000000000000000001659 121.0
BYD3_k127_8001678_6 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000005988 87.0
BYD3_k127_8001678_7 MiaB-like tRNA modifying enzyme K18707 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035598,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360 2.8.4.5 0.0000001183 56.0
BYD3_k127_8001678_8 TIGRFAM amino acid adenylation domain - - - 0.0006895 50.0
BYD3_k127_8007030_0 Transport permease protein K01992,K18233 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 412.0
BYD3_k127_8007030_1 Drug exporters of the RND superfamily K06994 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003536 263.0
BYD3_k127_8007030_2 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000002044 140.0
BYD3_k127_8019300_0 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 455.0
BYD3_k127_8019300_1 impB/mucB/samB family - - - 0.00000000000000000000000000000000000000000000000000000000000007429 236.0
BYD3_k127_8019300_2 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.00000000000000000000000000000000000000001791 157.0
BYD3_k127_8019300_3 Belongs to the ComB family K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.00000000000000000000000000000118 130.0
BYD3_k127_8019300_4 Rhomboid family K19225 - 3.4.21.105 0.0000000000000000000006793 104.0
BYD3_k127_8019300_5 - - - - 0.000000000001157 80.0
BYD3_k127_8023138_0 PFAM regulatory protein LuxR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008241 520.0
BYD3_k127_8023138_1 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 295.0
BYD3_k127_8084102_0 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000009151 225.0
BYD3_k127_8084102_1 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000008209 124.0
BYD3_k127_8110627_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 6.265e-291 921.0
BYD3_k127_8110627_1 Cysteine-rich domain K11473 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 358.0
BYD3_k127_8110627_2 alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000004698 204.0
BYD3_k127_8110627_3 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K19707 - - 0.0000000000000000000001749 108.0
BYD3_k127_8110627_4 Predicted membrane protein (DUF2231) - - - 0.000000000000001082 83.0
BYD3_k127_8129444_0 phosphate binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 390.0
BYD3_k127_8129444_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004746 349.0
BYD3_k127_8129444_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 349.0
BYD3_k127_8129444_3 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009038 337.0
BYD3_k127_8129444_4 Methyltransferase type 11 K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 323.0
BYD3_k127_8129444_5 binding-protein-dependent transport systems inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007746 330.0
BYD3_k127_8129444_6 Response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000000000000000000000000000000000007932 188.0
BYD3_k127_8129444_7 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000001159 154.0
BYD3_k127_8129444_8 Belongs to the NUDIX hydrolase family K03574 - 3.6.1.55 0.000000000000000000000000000000002501 134.0
BYD3_k127_8129444_9 arsR family K03892 - - 0.00000000000000000000000001052 112.0
BYD3_k127_8135154_0 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01667 - 4.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006391 485.0
BYD3_k127_8135154_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 470.0
BYD3_k127_8135154_2 Mur ligase family, catalytic domain K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000003911 272.0
BYD3_k127_8135154_3 Protein of unknown function, DUF480 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002113 237.0
BYD3_k127_8135154_4 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000003504 227.0
BYD3_k127_8135154_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000001314 192.0
BYD3_k127_8135154_6 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000004044 202.0
BYD3_k127_8135154_7 cell division protein FtsQ K03589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 - 0.0000000615 64.0
BYD3_k127_8138023_0 Aminotransferase class-III K01845 - 5.4.3.8 3.343e-237 739.0
BYD3_k127_8138023_1 Type II/IV secretion system protein K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092 492.0
BYD3_k127_8138023_10 cellulase activity - - - 0.000000000000000000000000000000000000000000000003704 201.0
BYD3_k127_8138023_11 NUBPL iron-transfer P-loop NTPase K02282 - - 0.0000000000000000000000000000000000000000000001429 186.0
BYD3_k127_8138023_12 Type ii secretion system K12510 - - 0.00000000000000000000000000000000000000000005168 186.0
BYD3_k127_8138023_13 Type II secretion system (T2SS), protein F K12511 - - 0.0000000000000000000000000000000000006002 151.0
BYD3_k127_8138023_14 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000000003766 137.0
BYD3_k127_8138023_16 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000003183 102.0
BYD3_k127_8138023_17 Pilus assembly protein K02279 - - 0.00000001131 65.0
BYD3_k127_8138023_18 TadE-like protein - - - 0.0000000135 62.0
BYD3_k127_8138023_19 Flp pilus assembly protein, pilin Flp K02651 - - 0.0004045 50.0
BYD3_k127_8138023_2 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 413.0
BYD3_k127_8138023_20 Putative Tad-like Flp pilus-assembly - - - 0.0004597 53.0
BYD3_k127_8138023_3 Belongs to the ABC transporter superfamily K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 413.0
BYD3_k127_8138023_4 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 362.0
BYD3_k127_8138023_5 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 384.0
BYD3_k127_8138023_6 ABC transporter (Permease) K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 338.0
BYD3_k127_8138023_7 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 330.0
BYD3_k127_8138023_8 Peptidase family S58 K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 317.0
BYD3_k127_8138023_9 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000007974 235.0
BYD3_k127_8145653_0 Methylenetetrahydrofolate reductase K00297,K00547,K00548 - 1.5.1.20,2.1.1.10,2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 492.0
BYD3_k127_8145653_1 Thioredoxin-like domain - - - 0.000000000119 72.0
BYD3_k127_8145653_2 Cytochrome C biogenesis protein - - - 0.000449 52.0
BYD3_k127_8153211_0 cation diffusion facilitator family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 404.0
BYD3_k127_8153211_1 Glutaredoxin K07390 - - 0.0000000000000000000000000000000009087 134.0
BYD3_k127_8153211_2 Belongs to the BolA IbaG family - - - 0.000000000003732 73.0
BYD3_k127_8162198_0 Bacterial extracellular solute-binding protein K11069 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 382.0
BYD3_k127_8162198_1 Putrescine transport system permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 337.0
BYD3_k127_8162198_2 CoA-binding domain protein - - - 0.0000000000000000000000001689 115.0
BYD3_k127_8162198_3 Binding-protein-dependent transport system inner membrane component K11070 - - 0.0000000000000001301 80.0
BYD3_k127_8172703_0 Iron-sulfur cluster-binding protein K18929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 458.0
BYD3_k127_8172703_1 aminodeoxychorismate synthase K01665,K03342 - 2.6.1.85,4.1.3.38 0.000000000000000000000000000000000000000000000000000000000006916 220.0
BYD3_k127_8172703_2 Amino-transferase class IV K02619 - 4.1.3.38 0.000000000000000000000000000000000000000000001288 184.0
BYD3_k127_8172703_3 Glutamine amidotransferase class-I - - - 0.0000000000000000000000000000000141 137.0
BYD3_k127_8172703_4 Pfam:DUF162 K00782 - - 0.0000000000000005776 90.0
BYD3_k127_8172703_5 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000009271 72.0
BYD3_k127_8172703_6 RibD C-terminal domain - - - 0.0000000003523 60.0
BYD3_k127_8181536_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004566 362.0
BYD3_k127_8181536_1 Sterol-sensing domain of SREBP cleavage-activation K06994 - - 0.00000000000000000000000000000000000000000000000000000000000000008078 228.0
BYD3_k127_8207384_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 491.0
BYD3_k127_8207384_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 321.0
BYD3_k127_8207384_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000002171 132.0
BYD3_k127_8207384_11 Belongs to the peptidase S8 family - - - 0.000000000000000000000003604 120.0
BYD3_k127_8207384_12 PFAM Peptidase M22, glycoprotease K14742 GO:0002949,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030312,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0071944,GO:0090304,GO:1901360 - 0.00000000000000000000001332 108.0
BYD3_k127_8207384_13 - - - - 0.0000000000000000000002646 107.0
BYD3_k127_8207384_14 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins - - - 0.000000000000000002182 89.0
BYD3_k127_8207384_15 TIGRFAM regulatory protein, FmdB - - - 0.000000003032 63.0
BYD3_k127_8207384_17 - - - - 0.0002392 47.0
BYD3_k127_8207384_18 Putative zinc-finger - - - 0.0008608 51.0
BYD3_k127_8207384_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005291 314.0
BYD3_k127_8207384_3 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002027 280.0
BYD3_k127_8207384_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000009699 271.0
BYD3_k127_8207384_5 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000002264 237.0
BYD3_k127_8207384_6 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000003877 222.0
BYD3_k127_8207384_7 Domain of unknown function (DUF2520) - - - 0.0000000000000000000000000000000000000000001503 168.0
BYD3_k127_8207384_8 FR47-like protein K03789 - 2.3.1.128 0.00000000000000000000000000000000000001767 158.0
BYD3_k127_8207384_9 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000001315 146.0
BYD3_k127_8212716_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009315 368.0
BYD3_k127_8212716_1 Endonuclease Exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001538 284.0
BYD3_k127_8212716_2 nuclear export factor GLE1 K07040 - - 0.0000000000000000000000001349 115.0
BYD3_k127_8212716_3 Psort location Cytoplasmic, score 8.87 - - - 0.00001841 52.0
BYD3_k127_8225451_0 SAICAR synthetase K01923,K01945 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 346.0
BYD3_k127_8225451_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000178 287.0
BYD3_k127_8225451_2 Cation antiporter K05569 - - 0.000000000000000000000000000000001089 132.0
BYD3_k127_8225451_3 Na H antiporter subunit K05571 - - 0.0000000000000000000000000000003652 130.0
BYD3_k127_8225451_4 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000008408 112.0
BYD3_k127_8225451_5 Multiple resistance and pH regulation protein F K05570 - - 0.00000000000000000000002008 107.0
BYD3_k127_8225451_6 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000001213 82.0
BYD3_k127_8244508_0 ATPase (P-type) K01537,K12952 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007456 548.0
BYD3_k127_8244508_1 Pfam:Pyridox_oxidase - - - 0.0000000000000000000000000000000000000000000003213 175.0
BYD3_k127_8247509_0 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000001055 149.0
BYD3_k127_8247509_1 Glycosyltransferase like family 2 K07011 - - 0.00000000000000000000000000003626 135.0
BYD3_k127_8247509_2 Polysaccharide deacetylase - - - 0.000000000000003255 86.0
BYD3_k127_8257099_0 Malate synthase K01638 - 2.3.3.9 1.29e-212 679.0
BYD3_k127_8257099_1 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 300.0
BYD3_k127_8257099_2 Isocitrate lyase K01637 - 4.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000645 234.0
BYD3_k127_8257099_3 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000001648 205.0
BYD3_k127_8257099_4 PFAM pyridoxamine 5'-phosphate oxidase-related - - - 0.000000000000000000000000000000000001464 143.0
BYD3_k127_8264207_0 cellular modified histidine biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008387 443.0
BYD3_k127_8264207_1 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001967 246.0
BYD3_k127_8264207_2 Elongation factor Tu domain 2 K03833 - - 0.000000003114 61.0
BYD3_k127_8264207_3 Domain of unknown function (DUF1707) - - - 0.00000479 55.0
BYD3_k127_8264207_4 Phospholipase_D-nuclease N-terminal - - - 0.0000166 49.0
BYD3_k127_8316328_0 Sodium:sulfate symporter transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 519.0
BYD3_k127_8316328_1 Phage integrase, N-terminal SAM-like domain K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009003 254.0
BYD3_k127_8316328_2 Phage integrase, N-terminal SAM-like domain K03733 - - 0.00000000000000000000000000000000000000000000000000000002315 212.0
BYD3_k127_8316328_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000006871 158.0
BYD3_k127_8326904_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.00000000000000000000000000000000000000000000000000000000000000000000001823 250.0
BYD3_k127_8326904_1 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000276 83.0
BYD3_k127_8326904_2 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000004351 60.0
BYD3_k127_8336253_0 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 290.0
BYD3_k127_8336253_1 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000000003921 191.0
BYD3_k127_8336253_2 TIR domain - - - 0.00000000000000000000000000000000122 149.0
BYD3_k127_8336253_3 (belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family) - - - 0.0000000000000000001908 104.0
BYD3_k127_8337307_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009606 374.0
BYD3_k127_8337307_1 GYD domain - - - 0.0000000000000000000000000006677 115.0
BYD3_k127_8337307_2 Penicillin-insensitive murein endopeptidase K07261 - - 0.000000004289 63.0
BYD3_k127_8373684_0 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000001057 96.0
BYD3_k127_8373684_1 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000006967 91.0
BYD3_k127_8373684_2 Tetratricopeptide repeat - - - 0.0000000000000225 85.0
BYD3_k127_8393439_0 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005015 377.0
BYD3_k127_8393439_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005164 355.0
BYD3_k127_8393439_2 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000002936 233.0
BYD3_k127_8475089_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 396.0
BYD3_k127_8475089_1 NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 308.0
BYD3_k127_8475089_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000001173 203.0
BYD3_k127_8475089_3 DNA polymerase III, delta' K02341 - 2.7.7.7 0.0000000000000000000000000001269 127.0
BYD3_k127_8475089_4 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000003568 104.0
BYD3_k127_8475089_5 LytR cell envelope-related transcriptional attenuator - - - 0.000000002243 65.0
BYD3_k127_849274_0 Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine K18911 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006547,GO:0006548,GO:0006575,GO:0006577,GO:0006578,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008213,GO:0008276,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016020,GO:0016053,GO:0016054,GO:0016740,GO:0016741,GO:0019439,GO:0019538,GO:0019752,GO:0032259,GO:0034641,GO:0036211,GO:0042398,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044464,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0052698,GO:0052699,GO:0052701,GO:0052703,GO:0052704,GO:0052707,GO:0052708,GO:0052709,GO:0052803,GO:0052805,GO:0071704,GO:0071944,GO:0097164,GO:0140096,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 372.0
BYD3_k127_849274_1 Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma- L-glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine K18912 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006575,GO:0006577,GO:0006578,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016053,GO:0016054,GO:0016491,GO:0019439,GO:0019752,GO:0034641,GO:0042398,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0052698,GO:0052699,GO:0052701,GO:0052703,GO:0052704,GO:0052708,GO:0052803,GO:0052805,GO:0055114,GO:0071704,GO:0097164,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606 1.14.99.50 0.000000000000000000000000000000000000000000000000000000000000000000000002539 251.0
BYD3_k127_8494829_0 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 551.0
BYD3_k127_8494829_1 PFAM MMPL domain protein K06994 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 299.0
BYD3_k127_8538636_0 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 605.0
BYD3_k127_8538636_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 324.0
BYD3_k127_8596070_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 383.0
BYD3_k127_8596070_1 RecF/RecN/SMC N terminal domain K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 383.0
BYD3_k127_8596070_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 303.0
BYD3_k127_8596070_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 313.0
BYD3_k127_8596070_4 Bacterial transcriptional activator domain - - - 0.000000000000000000000002235 113.0
BYD3_k127_8596070_5 DsrE/DsrF-like family - - - 0.000000000007703 76.0
BYD3_k127_8596070_6 Dodecin K09165 - - 0.0000000008459 68.0
BYD3_k127_8630211_0 Glycosyl hydrolases family 15 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005853 543.0
BYD3_k127_8630211_1 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000009655 185.0
BYD3_k127_8630211_2 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000005094 160.0
BYD3_k127_8630211_3 methyltransferase - - - 0.00000000000000000000000000000001087 130.0
BYD3_k127_8632978_0 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000004605 236.0
BYD3_k127_8632978_1 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01091,K06019 - 3.1.3.18,3.6.1.1 0.0000000000000000000000000000000000000000000000000185 186.0
BYD3_k127_8632978_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000006061 133.0
BYD3_k127_8632978_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000008767 115.0
BYD3_k127_8632978_4 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.00000002815 59.0
BYD3_k127_8644950_0 dehydrogenase K18369 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 504.0
BYD3_k127_8644950_1 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465 326.0
BYD3_k127_8644950_2 Glycosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004256 247.0
BYD3_k127_8644950_3 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.000000000000000000000000000000000000000000000000000000000000002512 224.0
BYD3_k127_8644950_4 ATPase P-type (Transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00003359 47.0
BYD3_k127_8682054_0 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 287.0
BYD3_k127_8682054_1 Predicted integral membrane protein (DUF2269) - - - 0.00000000000000000000000000000000001852 142.0
BYD3_k127_8682054_2 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000003181 70.0
BYD3_k127_869844_0 Zn_pept - - - 0.0 1146.0
BYD3_k127_869844_1 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 471.0
BYD3_k127_869844_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000436 324.0
BYD3_k127_869844_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. K08968 - 1.8.4.14 0.000000000000000000000000000000000000000000006598 175.0
BYD3_k127_869844_4 diguanylate cyclase - - - 0.000000000000000000000000000000006099 142.0
BYD3_k127_869844_5 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000005553 132.0
BYD3_k127_869844_6 Acetyltransferase (GNAT) domain - - - 0.00000000000000009141 89.0
BYD3_k127_8717403_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 371.0
BYD3_k127_8717403_1 Pfam SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000002432 189.0
BYD3_k127_8717403_2 D-glucuronyl C5-epimerase C-terminus - - - 0.00000000000000000000000000000001886 144.0
BYD3_k127_8717403_3 Belongs to the Fur family K03711 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0008270,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010035,GO:0010038,GO:0010043,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0042221,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046872,GO:0046914,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000002042 64.0
BYD3_k127_8717403_4 ompA family - - - 0.000000002615 70.0
BYD3_k127_8717403_5 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.0003166 44.0
BYD3_k127_875277_0 Iron-containing alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000001392 187.0
BYD3_k127_875277_1 cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000004541 178.0
BYD3_k127_875277_2 LysR substrate binding domain - - - 0.00005135 49.0
BYD3_k127_8761578_0 AMP-binding enzyme K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 446.0
BYD3_k127_8761578_1 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 302.0
BYD3_k127_8761578_2 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001419 287.0
BYD3_k127_8761578_3 Lysylphosphatidylglycerol synthase TM region - - - 0.00000000000000000000000000000145 134.0
BYD3_k127_8761578_4 - - - - 0.00000000000009588 72.0
BYD3_k127_877283_0 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000000006289 222.0
BYD3_k127_877283_1 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000001258 201.0
BYD3_k127_877283_2 Histidine kinase K02484,K07654 - 2.7.13.3 0.00000000000000000000000000000001289 146.0
BYD3_k127_8776844_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 592.0
BYD3_k127_8776844_1 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.000000000000000000000000000000000000000000000000000000000000000000001217 249.0
BYD3_k127_8776844_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000003881 145.0
BYD3_k127_8776844_3 Protein of unknown function (DUF721) - - - 0.0000009946 61.0
BYD3_k127_8791972_0 5'-nucleotidase, C-terminal domain K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 619.0
BYD3_k127_8791972_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000002849 229.0
BYD3_k127_8791972_2 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.00000000000000000000000000000000000000000000000000000000004453 218.0
BYD3_k127_8791972_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.000000000000000000000000000000000000000000000000000000006645 212.0
BYD3_k127_8791972_4 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000003529 127.0
BYD3_k127_8791972_5 PFAM Bacterial membrane flanked domain - - - 0.0000004169 60.0
BYD3_k127_8791972_6 Bacterial regulatory proteins, luxR family - - - 0.0001579 50.0
BYD3_k127_8808128_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000004012 203.0
BYD3_k127_8808128_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000001262 116.0
BYD3_k127_8808128_2 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000178 128.0
BYD3_k127_8808128_3 Phosphotransferase enzyme family - - - 0.0000009188 62.0
BYD3_k127_8808128_4 Glycosyl transferase family 2 - - - 0.0002799 46.0
BYD3_k127_8858234_0 DNA methylase K00571 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000822 378.0
BYD3_k127_8858234_1 Penicillin-binding Protein K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 373.0
BYD3_k127_8858234_10 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000008296 124.0
BYD3_k127_8858234_11 mechanosensitive ion channel - - - 0.0000000000000000000000003875 119.0
BYD3_k127_8858234_12 Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B) K04757 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 2.7.11.1 0.0000000000000000001232 93.0
BYD3_k127_8858234_13 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.00000000000000000746 95.0
BYD3_k127_8858234_14 Chorismate mutase K03856,K04092,K04093,K04516,K13853 - 2.5.1.54,5.4.99.5 0.00000000000000001709 85.0
BYD3_k127_8858234_15 CAAX protease self-immunity K07052 - - 0.000000000001864 76.0
BYD3_k127_8858234_16 PA domain K19701 - 3.4.11.10,3.4.11.6 0.000007684 59.0
BYD3_k127_8858234_2 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 306.0
BYD3_k127_8858234_3 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 300.0
BYD3_k127_8858234_4 Cys/Met metabolism PLP-dependent enzyme K01739,K01760,K01761 - 2.5.1.48,4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004711 292.0
BYD3_k127_8858234_5 molybdopterin binding domain K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001415 291.0
BYD3_k127_8858234_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002226 269.0
BYD3_k127_8858234_7 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007847 243.0
BYD3_k127_8858234_8 Glycosyl transferases group 1 K13057 - 2.4.1.245 0.00000000000000000000000000000000000149 140.0
BYD3_k127_8858234_9 HAD-superfamily hydrolase, subfamily IA, variant K07025 - - 0.0000000000000000000000000007202 122.0
BYD3_k127_8860973_0 OB-fold nucleic acid binding domain K03698 - - 0.000000000000000000000000000000000000000000000000000000000000000002088 237.0
BYD3_k127_8860973_1 Protein of unknown function (DUF1015) - - - 0.00000000000000000000000000000000000000000000106 172.0
BYD3_k127_8860973_2 Belongs to the CinA family - - - 0.0000000000000000000009599 100.0
BYD3_k127_8860973_3 peptidase M29 K19689 - - 0.00002533 48.0
BYD3_k127_8880284_0 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K01488 GO:0003674,GO:0003824,GO:0004000,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006144,GO:0006152,GO:0006154,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009113,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009156,GO:0009161,GO:0009163,GO:0009164,GO:0009165,GO:0009167,GO:0009168,GO:0009987,GO:0015949,GO:0015950,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0032261,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042440,GO:0042451,GO:0042454,GO:0042455,GO:0042737,GO:0043094,GO:0043096,GO:0043101,GO:0043103,GO:0043173,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046100,GO:0046101,GO:0046102,GO:0046103,GO:0046112,GO:0046128,GO:0046129,GO:0046130,GO:0046148,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 3.5.4.4 0.000000000000002083 79.0
BYD3_k127_8880284_1 Helix-turn-helix XRE-family like proteins - - - 0.000000000000024 85.0
BYD3_k127_8881648_0 PQQ enzyme repeat - - - 0.000000000000000000000000000000000001517 151.0
BYD3_k127_8881648_1 Belongs to the eIF-2B alpha beta delta subunits family K03680 - - 0.0000000000000000000000009501 116.0
BYD3_k127_8881648_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000002796 109.0
BYD3_k127_8881648_3 ATP-grasp - - - 0.0000000000001113 78.0
BYD3_k127_8928539_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 413.0
BYD3_k127_8928539_1 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000001364 222.0
BYD3_k127_8928539_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000005776 61.0
BYD3_k127_8928539_3 SpoIID LytB domain protein - - - 0.00000005765 59.0
BYD3_k127_8938445_0 DNA polymerase X K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007702 436.0
BYD3_k127_8938445_1 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001579 286.0
BYD3_k127_8938445_2 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000002362 140.0
BYD3_k127_8938445_3 Mechanosensitive ion channel K22044 - - 0.00000001385 66.0
BYD3_k127_8977543_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.0000000000000000000000000000000000000000001641 165.0
BYD3_k127_8977543_1 Imidazoleglycerol-phosphate dehydratase K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.00000000000000000000000000000000000000001515 174.0
BYD3_k127_8977543_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000001122 57.0
BYD3_k127_905819_0 Belongs to the peptidase S16 family K04076 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 364.0
BYD3_k127_905819_1 Phospholipase D. Active site motifs. K06131 - - 0.00000000000000000000000000000000000000000000003341 175.0
BYD3_k127_905819_2 PFAM CBS domain containing protein K04767 - - 0.00000000000000000000000000000001987 134.0
BYD3_k127_905819_3 response to stress - - - 0.00000000000000007635 92.0
BYD3_k127_911241_0 peptidase dimerisation domain protein K01270 - - 0.0000000000000000000000000000000000000000000000000005734 195.0
BYD3_k127_911241_1 Anaerobic c4-dicarboxylate membrane transporter K07792 - - 0.0000000000000000000000000002048 126.0
BYD3_k127_987217_0 glutamine synthetase K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 510.0
BYD3_k127_987217_1 Zinc-binding dehydrogenase K00121 - 1.1.1.1,1.1.1.284 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 396.0
BYD3_k127_987217_2 Glutamine amidotransferase domain K22081 - 2.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 355.0
BYD3_k127_987217_3 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000805 325.0
BYD3_k127_987217_4 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.00000000000000000000000000000000000000000000000000002034 192.0
BYD3_k127_99236_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 460.0
BYD3_k127_99236_1 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 311.0
BYD3_k127_99236_3 TIGRFAM FeS assembly protein SufB K07033,K09014 - - 0.0000000000000000000000000000000002928 132.0
BYD3_k127_99236_4 SUF system FeS assembly protein, NifU family K04488 - - 0.000000000000000000000000000000000656 138.0
BYD3_k127_99236_5 Rieske 2Fe-2S iron-sulphur domain K05710 - - 0.0000000000000000000000000000001785 125.0
BYD3_k127_99236_6 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000003392 121.0
BYD3_k127_99236_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000003706 121.0
BYD3_k127_99236_8 Cold-shock K03704 - - 0.000000000000000000006145 101.0
BYD3_k127_99236_9 O-methyltransferase - - - 0.000000005899 65.0