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Overview

ID MAG00120
Name BYD3_bin.33
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Vicinamibacteria
Order Vicinamibacterales
Family UBA2999
Genus Gp6-AA40
Species
Assembly information
Completeness (%) 93.69
Contamination (%) 0.99
GC content (%) 67.0
N50 (bp) 32,245
Genome size (bp) 5,219,596

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes4206

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1010349_0 Short chain fatty acid transporter K02106 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008938 512.0
BYD3_k127_1010349_1 Xylose isomerase domain protein TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 505.0
BYD3_k127_1010349_10 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000001761 207.0
BYD3_k127_1010349_11 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000009192 206.0
BYD3_k127_1010349_12 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000003184 198.0
BYD3_k127_1010349_13 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000002829 193.0
BYD3_k127_1010349_14 lactoylglutathione lyase activity K03088 - - 0.000000000000000000000000000000000000000000000000001917 194.0
BYD3_k127_1010349_15 Glycosyl transferase, family 9 K02843,K02849 - - 0.000000000000000000000000000000000000000000000000008033 195.0
BYD3_k127_1010349_16 O-Antigen ligase K18814 - - 0.00000000000000000000000000000000000000000000000001204 201.0
BYD3_k127_1010349_17 PFAM glycosyl transferase family 39 - - - 0.0000000000000000000000000000000000000000000000006025 197.0
BYD3_k127_1010349_18 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000008712 161.0
BYD3_k127_1010349_19 Tetratricopeptide repeat - - - 0.00000000000000000000000000001427 135.0
BYD3_k127_1010349_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004744 413.0
BYD3_k127_1010349_20 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000001255 103.0
BYD3_k127_1010349_21 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000002839 103.0
BYD3_k127_1010349_22 Trm112p-like protein K00912,K09791 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.1.130 0.00000000000000000009444 90.0
BYD3_k127_1010349_23 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000128 61.0
BYD3_k127_1010349_24 - - - - 0.000002829 55.0
BYD3_k127_1010349_25 GDSL-like Lipase/Acylhydrolase family - - - 0.000006211 52.0
BYD3_k127_1010349_3 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006024 384.0
BYD3_k127_1010349_4 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008583 355.0
BYD3_k127_1010349_5 Glutamine cyclotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005193 319.0
BYD3_k127_1010349_6 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002565 266.0
BYD3_k127_1010349_7 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003242 249.0
BYD3_k127_1010349_8 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000007932 244.0
BYD3_k127_1010349_9 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000004625 220.0
BYD3_k127_1021780_0 peptidoglycan glycosyltransferase activity K03588,K05364,K05837 GO:0002682,GO:0002684,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009605,GO:0009607,GO:0009987,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051301,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0075136 - 2.314e-249 809.0
BYD3_k127_1021780_10 histone H2A K63-linked ubiquitination K02283 - - 0.0000000000000000000000000004487 128.0
BYD3_k127_1021780_12 Alpha beta hydrolase - - - 0.00000000000000000624 92.0
BYD3_k127_1021780_13 cheY-homologous receiver domain - - - 0.00000000000001231 82.0
BYD3_k127_1021780_14 Protein of unknown function (DUF2662) - - - 0.000000000000693 77.0
BYD3_k127_1021780_2 electron transfer activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 454.0
BYD3_k127_1021780_3 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 379.0
BYD3_k127_1021780_4 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 382.0
BYD3_k127_1021780_5 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 376.0
BYD3_k127_1021780_6 histone H2A K63-linked ubiquitination K01768,K03220,K10914 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000006729 230.0
BYD3_k127_1021780_7 gag-polyprotein putative aspartyl protease - - - 0.00000000000000000000000000000000000000000000000000000438 205.0
BYD3_k127_1021780_8 PIN domain - - - 0.0000000000000000000000000000000000000000000000128 175.0
BYD3_k127_1021780_9 protein encoded in hypervariable junctions of pilus gene clusters - - - 0.00000000000000000000000000001536 124.0
BYD3_k127_1069147_0 FMN-dependent dehydrogenase K00104,K16422 - 1.1.3.15,1.1.3.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 424.0
BYD3_k127_1069147_1 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006473 327.0
BYD3_k127_1069147_2 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000000000000000000000000004542 220.0
BYD3_k127_1069147_3 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.00000000000000000001508 98.0
BYD3_k127_1069147_4 Dehydrogenase K00114 - 1.1.2.8 0.0000000000000002454 92.0
BYD3_k127_1069147_5 helix_turn_helix gluconate operon transcriptional repressor K00375 - - 0.000000000001633 72.0
BYD3_k127_1076671_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1335.0
BYD3_k127_1076671_1 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 1.323e-238 760.0
BYD3_k127_1076671_10 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 477.0
BYD3_k127_1076671_11 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008493 439.0
BYD3_k127_1076671_12 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 419.0
BYD3_k127_1076671_13 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 416.0
BYD3_k127_1076671_14 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 404.0
BYD3_k127_1076671_15 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008236 413.0
BYD3_k127_1076671_16 Thiazole biosynthesis protein ThiG K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 381.0
BYD3_k127_1076671_17 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 374.0
BYD3_k127_1076671_18 Cytidylyltransferase K00983 - 2.7.7.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 356.0
BYD3_k127_1076671_19 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 362.0
BYD3_k127_1076671_2 Phosphate acyltransferases K01897 - 6.2.1.3 1.067e-220 711.0
BYD3_k127_1076671_20 succinyl-diaminopimelate desuccinylase activity K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 341.0
BYD3_k127_1076671_21 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004598 330.0
BYD3_k127_1076671_22 TRAP transporter solute receptor, TAXI family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 311.0
BYD3_k127_1076671_23 Dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008269 300.0
BYD3_k127_1076671_24 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 322.0
BYD3_k127_1076671_25 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 310.0
BYD3_k127_1076671_26 Putative ATP-binding cassette K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 306.0
BYD3_k127_1076671_27 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 289.0
BYD3_k127_1076671_28 Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000712 291.0
BYD3_k127_1076671_29 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001279 293.0
BYD3_k127_1076671_3 Belongs to the transketolase family K00615 - 2.2.1.1 1.636e-217 692.0
BYD3_k127_1076671_30 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002624 282.0
BYD3_k127_1076671_31 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003309 291.0
BYD3_k127_1076671_32 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000001094 270.0
BYD3_k127_1076671_33 Fad dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000001622 250.0
BYD3_k127_1076671_34 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000008619 246.0
BYD3_k127_1076671_35 Glycosyl transferase family group 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000001517 242.0
BYD3_k127_1076671_36 Methionine biosynthesis protein MetW K18827 - 2.1.1.294,2.7.1.181 0.000000000000000000000000000000000000000000000000000000000000000004733 244.0
BYD3_k127_1076671_37 membrane - - - 0.000000000000000000000000000000000000000000000000000000000006675 220.0
BYD3_k127_1076671_38 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000001924 208.0
BYD3_k127_1076671_39 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000008541 198.0
BYD3_k127_1076671_4 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005848 608.0
BYD3_k127_1076671_40 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.0000000000000000000000000000000000000000000000000007202 186.0
BYD3_k127_1076671_41 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000000000000001212 203.0
BYD3_k127_1076671_42 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000001791 199.0
BYD3_k127_1076671_43 RmlD substrate binding domain K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000001398 189.0
BYD3_k127_1076671_44 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000007878 180.0
BYD3_k127_1076671_45 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000002779 181.0
BYD3_k127_1076671_46 - K02172 - - 0.0000000000000000000000000000000000000000000009416 178.0
BYD3_k127_1076671_47 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000000000000005515 165.0
BYD3_k127_1076671_48 - - - - 0.000000000000000000000000000000000000000003579 166.0
BYD3_k127_1076671_49 pfam gaf K08968 - 1.8.4.14 0.0000000000000000000000000000000000000002844 154.0
BYD3_k127_1076671_5 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 589.0
BYD3_k127_1076671_50 Tetratricopeptide repeat - - - 0.00000000000000000000000000000003923 136.0
BYD3_k127_1076671_51 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000001521 126.0
BYD3_k127_1076671_52 manganese ion transmembrane transporter activity - - - 0.00000000000000000000000000001731 136.0
BYD3_k127_1076671_53 DinB superfamily - - - 0.0000000000000000000000000001021 122.0
BYD3_k127_1076671_54 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000001407 92.0
BYD3_k127_1076671_55 Belongs to the GPAT DAPAT family K00631 GO:0003674,GO:0003824,GO:0004366,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006629,GO:0006631,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019752,GO:0031224,GO:0031226,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.3.1.15 0.00000000000000000002326 104.0
BYD3_k127_1076671_56 - - - - 0.000000000000000003746 98.0
BYD3_k127_1076671_57 ThiS family - - - 0.000000000000001176 78.0
BYD3_k127_1076671_58 guanyl-nucleotide exchange factor activity - - - 0.00000000000003707 86.0
BYD3_k127_1076671_59 MacB-like periplasmic core domain - - - 0.00000000000006174 79.0
BYD3_k127_1076671_6 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000743 563.0
BYD3_k127_1076671_60 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000007161 76.0
BYD3_k127_1076671_61 ubiE/COQ5 methyltransferase family - - - 0.0000000000002658 80.0
BYD3_k127_1076671_62 - - - - 0.000000000002794 70.0
BYD3_k127_1076671_63 Domain of unknown function (DUF4149) - - - 0.000000000229 68.0
BYD3_k127_1076671_64 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.000000001017 71.0
BYD3_k127_1076671_65 MacB-like periplasmic core domain - - - 0.000000001555 66.0
BYD3_k127_1076671_67 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000003665 60.0
BYD3_k127_1076671_68 Methyltransferase fkbm family - - - 0.000001441 60.0
BYD3_k127_1076671_69 Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00001837 53.0
BYD3_k127_1076671_7 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 553.0
BYD3_k127_1076671_8 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 476.0
BYD3_k127_1076671_9 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 482.0
BYD3_k127_1092004_0 Amidase K01426 - 3.5.1.4 3.384e-222 705.0
BYD3_k127_1092004_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 579.0
BYD3_k127_1092004_10 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000003514 193.0
BYD3_k127_1092004_11 Uncharacterised protein family UPF0066 K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000001326 176.0
BYD3_k127_1092004_12 - - - - 0.000000000000000000000000000000000000000000001379 174.0
BYD3_k127_1092004_13 PFAM von Willebrand factor type A - - - 0.0000000000000000000000001267 121.0
BYD3_k127_1092004_14 Frataxin-like domain K06202 - - 0.0000000000000000000004893 99.0
BYD3_k127_1092004_2 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004838 496.0
BYD3_k127_1092004_3 Methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 390.0
BYD3_k127_1092004_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 338.0
BYD3_k127_1092004_5 FRG - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009642 300.0
BYD3_k127_1092004_6 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 297.0
BYD3_k127_1092004_7 ErfK YbiS YcfS YnhG family protein K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001045 279.0
BYD3_k127_1092004_8 peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001363 253.0
BYD3_k127_1092004_9 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000051 233.0
BYD3_k127_1128280_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.106e-235 737.0
BYD3_k127_1128280_1 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 313.0
BYD3_k127_1128280_10 phosphate-selective porin O and P K07221 - - 0.0000000000000000000000000001848 130.0
BYD3_k127_1128280_11 - - - - 0.0000000000000000000001848 108.0
BYD3_k127_1128280_12 - - - - 0.000000000000000005268 98.0
BYD3_k127_1128280_13 GDSL-like Lipase/Acylhydrolase - - - 0.0002745 52.0
BYD3_k127_1128280_2 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 304.0
BYD3_k127_1128280_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000005088 266.0
BYD3_k127_1128280_4 Spore coat protein CotH - - - 0.00000000000000000000000000000000000000000000000000000000000002022 241.0
BYD3_k127_1128280_5 - - - - 0.00000000000000000000000000000000000000000000000000000000003094 224.0
BYD3_k127_1128280_6 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000005767 181.0
BYD3_k127_1128280_7 Peptidase MA superfamily - - - 0.000000000000000000000000000000000001439 155.0
BYD3_k127_1128280_8 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000001255 136.0
BYD3_k127_1128280_9 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000002096 138.0
BYD3_k127_1128383_0 gluconolactonase K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 496.0
BYD3_k127_1128383_1 PQQ enzyme repeat K00117 - 1.1.5.2 0.0000000000000000000000000000000000000000000000000002395 196.0
BYD3_k127_1149032_0 Trypsin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 480.0
BYD3_k127_1149032_1 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 342.0
BYD3_k127_1149032_2 PFAM Methylene-tetrahydromethanopterin dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003844 269.0
BYD3_k127_1149032_3 formaldehyde-activating enzyme K10713 - 4.2.1.147 0.00000000000000000000000000000000000000000000000000000000000000000000123 240.0
BYD3_k127_1149032_4 Protein of unknown function (DUF1464) - - - 0.0000000000000000000000000000000000000000000000000000000000001082 225.0
BYD3_k127_1149032_5 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000007941 222.0
BYD3_k127_1149032_6 formylmethanofuran dehydrogenase, subunit K00201 - 1.2.7.12 0.0000000000000000000000000000000000000000000000000000001583 208.0
BYD3_k127_1149032_7 phospholipase Carboxylesterase - - - 0.0000000000000000000000000006761 125.0
BYD3_k127_1149032_8 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.0000000000000000000000000008664 126.0
BYD3_k127_1156483_0 56kDa selenium binding protein (SBP56) K17285 - - 3.213e-222 700.0
BYD3_k127_1156483_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 2.713e-203 664.0
BYD3_k127_1156483_10 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000001916 122.0
BYD3_k127_1156483_11 Protein of unknown function (DUF3018) - - - 0.000000000000000001164 87.0
BYD3_k127_1156483_12 - - - - 0.0000000000002498 76.0
BYD3_k127_1156483_13 Prolyl oligopeptidase family - - - 0.0000000003214 73.0
BYD3_k127_1156483_14 response to abiotic stimulus K06867 - - 0.000000002321 69.0
BYD3_k127_1156483_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006174 624.0
BYD3_k127_1156483_3 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 476.0
BYD3_k127_1156483_4 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 439.0
BYD3_k127_1156483_5 major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 350.0
BYD3_k127_1156483_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000002643 224.0
BYD3_k127_1156483_7 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000003755 188.0
BYD3_k127_1156483_8 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000002508 166.0
BYD3_k127_1156483_9 growth inhibitor K07171 - - 0.00000000000000000000000000000000000005643 148.0
BYD3_k127_12420_0 PQQ-like domain K17760 - 1.1.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 500.0
BYD3_k127_12420_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 324.0
BYD3_k127_12420_2 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 320.0
BYD3_k127_12420_3 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003456 273.0
BYD3_k127_12420_4 NADP oxidoreductase, coenzyme f420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000007399 244.0
BYD3_k127_12420_5 - - - - 0.00000000000000000000000000000000000000000000003231 181.0
BYD3_k127_12420_6 TIR domain - - - 0.0000000000000000000000000000000000000004713 166.0
BYD3_k127_12420_7 MacB-like periplasmic core domain - - - 0.0000000000000008726 88.0
BYD3_k127_12420_8 NIPSNAP - - - 0.000000000000002276 85.0
BYD3_k127_12420_9 Transcriptional regulator PadR-like family - - - 0.000000000000007081 75.0
BYD3_k127_1258976_0 Aldehyde dehydrogenase family K13877 - 1.2.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 564.0
BYD3_k127_1258976_1 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008846 274.0
BYD3_k127_1258976_2 PQQ enzyme repeat K00117 - 1.1.5.2 0.000000000000000000948 88.0
BYD3_k127_1258976_3 Belongs to the glycosyl hydrolase 28 family - - - 0.000001025 55.0
BYD3_k127_1316442_0 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000006326 194.0
BYD3_k127_1316442_1 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000000000157 136.0
BYD3_k127_1316442_2 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000000000000000000007406 111.0
BYD3_k127_1316442_3 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000000000889 63.0
BYD3_k127_1349629_0 Rhodanese-like domain K01069 - 3.1.2.6 8.572e-202 647.0
BYD3_k127_1349629_1 alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 326.0
BYD3_k127_1349629_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002787 259.0
BYD3_k127_1526554_0 Serine hydrolase involved in the detoxification of formaldehyde - - - 1.531e-226 709.0
BYD3_k127_1526554_10 Phosphate sensor histidine kinase, HAMP and PAS domain-containing K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 330.0
BYD3_k127_1526554_11 RNA pseudouridylate synthase K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008044 320.0
BYD3_k127_1526554_12 Binding-protein-dependent transport system inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 317.0
BYD3_k127_1526554_13 nitric oxide dioxygenase activity K00523 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000004673 261.0
BYD3_k127_1526554_14 Protein of unknown function DUF47 K02039,K07220 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000000000000000000000000000001797 244.0
BYD3_k127_1526554_15 response regulator K07657 - - 0.0000000000000000000000000000000000000000000000000000000001386 211.0
BYD3_k127_1526554_16 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.00000000000000000000000000000000000000487 147.0
BYD3_k127_1526554_17 Cupin domain - - - 0.0000000000000000000000000000000000005218 146.0
BYD3_k127_1526554_18 Putative restriction endonuclease - - - 0.000000000000000000000000000000004646 133.0
BYD3_k127_1526554_19 glyoxalase III activity - - - 0.0000000000000000000000000000000342 143.0
BYD3_k127_1526554_2 SMART Elongator protein 3 MiaB NifB - - - 1.331e-214 677.0
BYD3_k127_1526554_20 DinB superfamily - - - 0.0000000000000000000000000007202 122.0
BYD3_k127_1526554_21 K homology RNA-binding domain K16726 GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0002376,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007005,GO:0007010,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007399,GO:0007423,GO:0008150,GO:0009605,GO:0009607,GO:0009653,GO:0009887,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010506,GO:0010507,GO:0010639,GO:0010821,GO:0010823,GO:0010927,GO:0010941,GO:0016043,GO:0019222,GO:0019730,GO:0019899,GO:0019900,GO:0019901,GO:0022008,GO:0022607,GO:0023052,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030036,GO:0030154,GO:0030182,GO:0030239,GO:0031032,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031430,GO:0031672,GO:0031674,GO:0032501,GO:0032502,GO:0032989,GO:0033043,GO:0040011,GO:0042692,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043207,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043292,GO:0044085,GO:0044422,GO:0044424,GO:0044444,GO:0044449,GO:0044464,GO:0045087,GO:0045214,GO:0046530,GO:0048468,GO:0048513,GO:0048519,GO:0048523,GO:0048592,GO:0048646,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051146,GO:0051704,GO:0051707,GO:0051716,GO:0055001,GO:0055002,GO:0060361,GO:0060548,GO:0061061,GO:0065007,GO:0070925,GO:0071840,GO:0090596,GO:0097435,GO:0099080,GO:0099081,GO:0099512,GO:1903146,GO:1903147 - 0.000000000000000000000002866 118.0
BYD3_k127_1526554_22 Putative restriction endonuclease - - - 0.000000000000000004345 85.0
BYD3_k127_1526554_3 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008828 455.0
BYD3_k127_1526554_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008212 413.0
BYD3_k127_1526554_5 PFAM phospholipase D Transphosphatidylase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 420.0
BYD3_k127_1526554_6 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 361.0
BYD3_k127_1526554_7 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005766 356.0
BYD3_k127_1526554_8 Phosphate ABC transporter substrate-binding protein, PhoT family K02040 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 379.0
BYD3_k127_1526554_9 PFAM zinc iron permease K07238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 334.0
BYD3_k127_1532369_0 PQQ-like domain K00117 - 1.1.5.2 3.833e-217 693.0
BYD3_k127_1532369_1 Belongs to the thiolase family K07508 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 458.0
BYD3_k127_1532369_2 Dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005721 406.0
BYD3_k127_1532369_3 PFAM Formaldehyde-activating enzyme (Fae) K10713 - 4.2.1.147 0.000001576 51.0
BYD3_k127_1538641_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000005153 172.0
BYD3_k127_1538641_1 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000004913 124.0
BYD3_k127_1538641_2 MacB-like periplasmic core domain - - - 0.000000000000000000000003747 113.0
BYD3_k127_1538641_3 Cold shock protein domain - - - 0.000000000000000001722 90.0
BYD3_k127_1538641_4 Protein of unknown function (DUF1552) - - - 0.000000000002485 68.0
BYD3_k127_1614194_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1343.0
BYD3_k127_1614194_1 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 558.0
BYD3_k127_1614194_10 - K02172 - - 0.000000000000000000000000000000000000000000000244 179.0
BYD3_k127_1614194_11 PFAM Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain - - - 0.00000000000000000000000000000000000000000007964 179.0
BYD3_k127_1614194_12 Serine aminopeptidase, S33 K18100 - - 0.0000000000000000000000000000000000000001055 162.0
BYD3_k127_1614194_13 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000001714 151.0
BYD3_k127_1614194_14 BlaR1 peptidase M56 - - - 0.00000000000000000000000000000004548 144.0
BYD3_k127_1614194_15 Penicillinase repressor - - - 0.000000000000000000000000001785 122.0
BYD3_k127_1614194_16 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000000000000000000001373 124.0
BYD3_k127_1614194_17 Peptidase M56 - - - 0.00000000000000000009923 104.0
BYD3_k127_1614194_18 NAD dependent epimerase/dehydratase family - - - 0.0000009189 52.0
BYD3_k127_1614194_19 Domain present in PSD-95, Dlg, and ZO-1/2. K04771 - 3.4.21.107 0.0002553 54.0
BYD3_k127_1614194_2 Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 439.0
BYD3_k127_1614194_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 338.0
BYD3_k127_1614194_4 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 317.0
BYD3_k127_1614194_5 Multicopper oxidase K06324 - 1.16.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001279 258.0
BYD3_k127_1614194_6 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000349 243.0
BYD3_k127_1614194_7 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000006019 229.0
BYD3_k127_1614194_8 Transporter, CPA2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000007533 244.0
BYD3_k127_1614194_9 Belongs to the arginase family K01476 - 3.5.3.1 0.00000000000000000000000000000000000000000000000000005255 199.0
BYD3_k127_1625225_0 DEAD DEAH box helicase K03724 - - 0.0 1454.0
BYD3_k127_1625225_1 MacB-like periplasmic core domain - - - 2.413e-269 852.0
BYD3_k127_1625225_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007178 327.0
BYD3_k127_1625225_11 Methyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 328.0
BYD3_k127_1625225_12 nitronate monooxygenase activity K00459 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 297.0
BYD3_k127_1625225_13 Cyclic nucleotide-monophosphate binding domain K21564 - - 0.000000000000000000000000000000000000000000000000000000000000000000001079 245.0
BYD3_k127_1625225_14 ankyrin repeat K15503 - - 0.000000000000000000000000000000000000000000000000000000000000000006249 244.0
BYD3_k127_1625225_15 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.0000000000000000000000000000000000000000000000000000000001979 215.0
BYD3_k127_1625225_16 Histidine kinase-like ATPase domain K01338,K04757,K06379,K08282,K17752 - 2.7.11.1,3.4.21.53 0.0000000000000000000000000000000000000000000000000005039 198.0
BYD3_k127_1625225_17 - K06992 - - 0.0000000000000000000000000000000000000000000000001204 186.0
BYD3_k127_1625225_18 PFAM transcriptional regulator PadR family protein - - - 0.00000000000000000000000000000000000000000000005289 171.0
BYD3_k127_1625225_19 EamA-like transporter family K07790 - - 0.000000000000000000000000000000000000000000000611 179.0
BYD3_k127_1625225_2 DNA topological change K03168 - 5.99.1.2 1.175e-233 749.0
BYD3_k127_1625225_20 domain, Protein K01179 - 3.2.1.4 0.0000000000000000000000000000000000000001269 167.0
BYD3_k127_1625225_21 - - - - 0.000000000000000000000000000000000000002673 162.0
BYD3_k127_1625225_22 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000000003586 148.0
BYD3_k127_1625225_24 Involved in initiation control of chromosome replication K07484 - - 0.0000000000001891 81.0
BYD3_k127_1625225_25 CHRD domain - - - 0.00001245 54.0
BYD3_k127_1625225_3 ABC-type transport system involved in lipoprotein release permease component K02004 - - 1.058e-224 738.0
BYD3_k127_1625225_4 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 607.0
BYD3_k127_1625225_5 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 590.0
BYD3_k127_1625225_6 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006765 599.0
BYD3_k127_1625225_7 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 538.0
BYD3_k127_1625225_8 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 378.0
BYD3_k127_1625225_9 (ABC) transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 336.0
BYD3_k127_1625433_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1124.0
BYD3_k127_1625433_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 3.67e-225 708.0
BYD3_k127_1625433_10 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007051 325.0
BYD3_k127_1625433_11 Activator of Hsp90 ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009921 248.0
BYD3_k127_1625433_12 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278,K00767 - 1.4.3.16,2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000001128 259.0
BYD3_k127_1625433_13 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000000000000000000000000003362 236.0
BYD3_k127_1625433_14 Cobalamin B12-binding K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000003873 193.0
BYD3_k127_1625433_15 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000000003735 191.0
BYD3_k127_1625433_16 Predicted membrane protein (DUF2157) - - - 0.000000000000000000000000000000000000000000000000258 193.0
BYD3_k127_1625433_17 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000002592 160.0
BYD3_k127_1625433_18 peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000005181 169.0
BYD3_k127_1625433_19 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000006956 170.0
BYD3_k127_1625433_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 575.0
BYD3_k127_1625433_20 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000009053 173.0
BYD3_k127_1625433_21 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000754 152.0
BYD3_k127_1625433_22 - K02172 - - 0.00000000000000000000000000000000001037 147.0
BYD3_k127_1625433_23 Tetratricopeptide repeat - - - 0.000000000000000000000000000000245 136.0
BYD3_k127_1625433_24 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000726 110.0
BYD3_k127_1625433_25 Domain of unknown function (DUF4824) - - - 0.0000000000000000009785 96.0
BYD3_k127_1625433_26 oxidoreductase activity - - - 0.0000000000000003184 93.0
BYD3_k127_1625433_27 Major Facilitator Superfamily - - - 0.0000000002555 72.0
BYD3_k127_1625433_28 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000001003 67.0
BYD3_k127_1625433_29 toxin-antitoxin pair type II binding - - - 0.00000001949 63.0
BYD3_k127_1625433_3 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006838 559.0
BYD3_k127_1625433_30 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000003734 62.0
BYD3_k127_1625433_31 outer membrane autotransporter barrel domain protein - - - 0.0000001822 61.0
BYD3_k127_1625433_32 SMART Transport-associated and nodulation - - - 0.0001233 46.0
BYD3_k127_1625433_4 Transglycosylase K05366 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042546,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 561.0
BYD3_k127_1625433_5 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 528.0
BYD3_k127_1625433_6 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 432.0
BYD3_k127_1625433_7 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 438.0
BYD3_k127_1625433_8 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 436.0
BYD3_k127_1625433_9 Membrane transport protein K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004151 342.0
BYD3_k127_1656854_0 - - - - 0.0000000000000000000000000000000000000000000001848 179.0
BYD3_k127_1656854_1 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000001223 187.0
BYD3_k127_1656854_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000006084 135.0
BYD3_k127_1695731_0 Animal haem peroxidase - - - 1.07e-228 722.0
BYD3_k127_1695731_1 Putative serine esterase (DUF676) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 599.0
BYD3_k127_1695731_10 Domain of Unknown Function (DUF1206) - - - 0.0000000000000000000000000000000000000000000000001186 188.0
BYD3_k127_1695731_11 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000009978 169.0
BYD3_k127_1695731_12 Aldo/keto reductase family - - - 0.00000000000000000000000000000000001474 153.0
BYD3_k127_1695731_13 PFAM phospholipase Carboxylesterase - - - 0.000000000000000000000000000000002358 140.0
BYD3_k127_1695731_14 GYD domain - - - 0.0000000000000000000000000002838 117.0
BYD3_k127_1695731_16 cytochrome C peroxidase - - - 0.000000000000001626 83.0
BYD3_k127_1695731_18 - - - - 0.000000004458 65.0
BYD3_k127_1695731_19 - - - - 0.0000003099 61.0
BYD3_k127_1695731_2 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 565.0
BYD3_k127_1695731_20 - - - - 0.00001349 52.0
BYD3_k127_1695731_21 Penicillinase repressor - - - 0.00006219 47.0
BYD3_k127_1695731_3 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 544.0
BYD3_k127_1695731_4 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 544.0
BYD3_k127_1695731_5 Protein kinase domain K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 441.0
BYD3_k127_1695731_6 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 291.0
BYD3_k127_1695731_7 Protein of unknown function (DUF1326) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001417 253.0
BYD3_k127_1695731_8 Belongs to the GPAT DAPAT family - - - 0.00000000000000000000000000000000000000000000000000000000002693 231.0
BYD3_k127_1695731_9 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000002147 198.0
BYD3_k127_1786181_0 UvrD/REP helicase N-terminal domain - - - 4.979e-315 1002.0
BYD3_k127_1786181_1 PD-(D/E)XK nuclease superfamily - - - 1.968e-238 775.0
BYD3_k127_1786181_10 - - - - 0.000000000000232 76.0
BYD3_k127_1786181_11 Transcriptional regulatory protein, C terminal - - - 0.000006783 49.0
BYD3_k127_1786181_12 - - - - 0.00001132 51.0
BYD3_k127_1786181_2 ABC1 family K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 557.0
BYD3_k127_1786181_3 MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009234 544.0
BYD3_k127_1786181_4 Iron-regulated membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 451.0
BYD3_k127_1786181_5 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000444 456.0
BYD3_k127_1786181_6 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000009536 262.0
BYD3_k127_1786181_8 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.0000000000000000000000000503 112.0
BYD3_k127_1786181_9 4Fe-4S dicluster domain K05524 - - 0.0000000000000000000000007498 115.0
BYD3_k127_1790557_0 Belongs to the peptidase S1B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004841 312.0
BYD3_k127_1790557_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003217 271.0
BYD3_k127_1790557_2 - - - - 0.000000000000000000000000000000000000000000000008179 190.0
BYD3_k127_1790557_3 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000002947 137.0
BYD3_k127_1790557_4 - - - - 0.00000000000000000002448 96.0
BYD3_k127_1790557_5 - - - - 0.00000000000000000006313 98.0
BYD3_k127_1790557_6 - - - - 0.000000000000001835 87.0
BYD3_k127_181635_0 CotH kinase protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 482.0
BYD3_k127_181635_1 Efflux ABC transporter permease protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 396.0
BYD3_k127_181635_10 Transcriptional regulator - - - 0.00000000000000000000001856 111.0
BYD3_k127_181635_11 Domain of unknown function (DUF4440) - - - 0.0000000000000003548 86.0
BYD3_k127_181635_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 377.0
BYD3_k127_181635_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 307.0
BYD3_k127_181635_4 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005126 281.0
BYD3_k127_181635_5 Transcriptional regulatory protein, C terminal K07662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009947 264.0
BYD3_k127_181635_6 - - - - 0.00000000000000000000000000000000000000000000000000000000003946 222.0
BYD3_k127_181635_7 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000004951 169.0
BYD3_k127_181635_8 Cupin domain - - - 0.000000000000000000000000001342 116.0
BYD3_k127_1836219_0 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 497.0
BYD3_k127_1836219_1 PFAM Sulfatase - - - 0.00000000000000000000000000000000000000000000000000008623 190.0
BYD3_k127_1844311_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 1.801e-320 1006.0
BYD3_k127_1844311_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 8.493e-196 627.0
BYD3_k127_1844311_2 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002645 267.0
BYD3_k127_1844311_3 COG1520 FOG WD40-like repeat - - - 0.0000000000007622 81.0
BYD3_k127_1844311_4 oxidoreductase activity - - - 0.000000001202 69.0
BYD3_k127_1844311_5 AbiEi antitoxin C-terminal domain - - - 0.000008454 53.0
BYD3_k127_1858984_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 612.0
BYD3_k127_1858984_1 serine-type peptidase activity K01990,K08884,K12132,K18912 - 1.14.99.50,2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 301.0
BYD3_k127_1858984_2 - - - - 0.0000000000000000000000000000000000000001256 158.0
BYD3_k127_1858984_3 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000002257 138.0
BYD3_k127_1858984_4 - - - - 0.0000000000000000000000000000001731 130.0
BYD3_k127_1858984_6 Peptidase M56, BlaR1 - - - 0.000000000000000000961 97.0
BYD3_k127_1892105_0 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 490.0
BYD3_k127_1892105_1 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 324.0
BYD3_k127_1892105_2 Catalyzes the hydrolysis of methenyl-H(4)MPT( ) to 5- formyl-H(4)MPT K01499 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016787,GO:0016810,GO:0016814,GO:0018759,GO:0019238,GO:0043446,GO:0044237,GO:0044424,GO:0044464,GO:0071704 3.5.4.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009347 312.0
BYD3_k127_1892105_3 Belongs to the RimK family K05827,K05844 - 6.3.2.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005646 283.0
BYD3_k127_1892105_4 Hydantoinase/oxoprolinase K07072 - 2.5.1.131 0.0000000000000000000000000000000000000000000000000000000000000001915 242.0
BYD3_k127_1892105_5 ATP:dephospho-CoA triphosphoribosyl transferase K05966 - 2.4.2.52 0.0000000000000000000000000000000000000000000000000000000000000002931 234.0
BYD3_k127_1892105_6 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000002564 152.0
BYD3_k127_1892105_7 - K01633,K07144 - 1.13.11.81,2.7.4.31,4.1.2.25,5.1.99.8 0.000000000000000000000000000112 132.0
BYD3_k127_1892105_8 Histidine biosynthesis protein K01814 - 5.3.1.16 0.000000000000000000000000004626 124.0
BYD3_k127_194963_0 Glutamate synthase central domain K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.0 2027.0
BYD3_k127_194963_1 Flavin containing amine oxidoreductase K00266 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.4.1.13,1.4.1.14 5.691e-231 726.0
BYD3_k127_194963_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 594.0
BYD3_k127_194963_3 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 336.0
BYD3_k127_194963_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000004604 259.0
BYD3_k127_194963_5 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.00000000000000000000000000000000000003642 152.0
BYD3_k127_194963_6 DNA-templated transcription, initiation - - - 0.00000000000000000000000000002426 125.0
BYD3_k127_194963_7 PFAM Radical SAM - - - 0.0000000000000000000000000001091 121.0
BYD3_k127_1955672_0 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 329.0
BYD3_k127_1955672_1 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000001533 196.0
BYD3_k127_1960001_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 3.936e-253 810.0
BYD3_k127_1960001_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 517.0
BYD3_k127_1960001_11 Competence protein - - - 0.000000000000000003253 95.0
BYD3_k127_1960001_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 386.0
BYD3_k127_1960001_3 PFAM Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003156 269.0
BYD3_k127_1960001_4 DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000394 237.0
BYD3_k127_1960001_5 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.000000000000000000000000000000000000000003396 175.0
BYD3_k127_1960001_6 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000006035 144.0
BYD3_k127_1960001_7 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000003485 129.0
BYD3_k127_1960001_8 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000001158 117.0
BYD3_k127_1960001_9 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000001507 100.0
BYD3_k127_2003754_0 NADPH quinone reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 360.0
BYD3_k127_2003754_1 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006384 267.0
BYD3_k127_2003754_2 Ankyrin repeat - - - 0.0000000000000000000000000000000000000000000000000000000000004946 231.0
BYD3_k127_2003754_3 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000000000000000102 173.0
BYD3_k127_2003754_4 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000000001665 162.0
BYD3_k127_2007083_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000001933 239.0
BYD3_k127_2007083_1 - - - - 0.0000000000000000000000000000000000000000000000000000000003424 212.0
BYD3_k127_2007083_2 TonB-dependent receptor - - - 0.0000000000000000000000000001437 132.0
BYD3_k127_2007083_3 - - - - 0.0000000000000000000000000009028 124.0
BYD3_k127_2007083_4 - - - - 0.000000000000000000000001297 110.0
BYD3_k127_2022555_0 amino acid adenylation - - - 1.409e-234 760.0
BYD3_k127_2022555_1 acyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007539 602.0
BYD3_k127_2058661_0 TonB-dependent receptor - - - 0.0 1490.0
BYD3_k127_2058661_1 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0 1277.0
BYD3_k127_2058661_10 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 565.0
BYD3_k127_2058661_11 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000717 496.0
BYD3_k127_2058661_12 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 480.0
BYD3_k127_2058661_13 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 466.0
BYD3_k127_2058661_14 transmembrane transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 466.0
BYD3_k127_2058661_15 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 379.0
BYD3_k127_2058661_16 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009757 360.0
BYD3_k127_2058661_17 Formate/nitrite transporter K06212 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 339.0
BYD3_k127_2058661_18 Phosphoribosyl synthetase-associated domain K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008502 292.0
BYD3_k127_2058661_19 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004618 295.0
BYD3_k127_2058661_2 AcrB/AcrD/AcrF family - - - 0.0 1130.0
BYD3_k127_2058661_20 Helix-hairpin-helix domain K04477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001989 271.0
BYD3_k127_2058661_21 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002512 275.0
BYD3_k127_2058661_22 Mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001033 278.0
BYD3_k127_2058661_23 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002761 261.0
BYD3_k127_2058661_24 Thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000002073 250.0
BYD3_k127_2058661_25 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004429 246.0
BYD3_k127_2058661_26 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000517 231.0
BYD3_k127_2058661_27 hydroperoxide reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000005984 221.0
BYD3_k127_2058661_28 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000000004761 218.0
BYD3_k127_2058661_29 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000004355 219.0
BYD3_k127_2058661_3 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 4.446e-316 991.0
BYD3_k127_2058661_30 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000006799 212.0
BYD3_k127_2058661_31 Transcriptional regulator, LysR - - - 0.00000000000000000000000000000000000000000000000000000001334 205.0
BYD3_k127_2058661_32 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000003699 204.0
BYD3_k127_2058661_33 bacterial OsmY and nodulation domain - - - 0.0000000000000000000000000000000000000000000001676 190.0
BYD3_k127_2058661_34 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000004011 173.0
BYD3_k127_2058661_35 Haem-binding domain - - - 0.0000000000000000000000000000000000000001061 165.0
BYD3_k127_2058661_36 DsrE/DsrF-like family K09004 - - 0.0000000000000000000000000000000000000002121 155.0
BYD3_k127_2058661_37 - - - - 0.0000000000000000000000000000000001328 147.0
BYD3_k127_2058661_38 VIT family - - - 0.0000000000000000000000000000000009389 138.0
BYD3_k127_2058661_39 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000001129 132.0
BYD3_k127_2058661_4 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 4.822e-280 884.0
BYD3_k127_2058661_40 Universal stress protein family - - - 0.00000000000000000000000000000003964 136.0
BYD3_k127_2058661_41 - - - - 0.0000000000000000000000000000003533 134.0
BYD3_k127_2058661_42 OsmC-like protein - - - 0.00000000000000000000000000001183 125.0
BYD3_k127_2058661_43 Universal stress protein family - - - 0.00000000000000000000000000001756 132.0
BYD3_k127_2058661_44 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000001933 124.0
BYD3_k127_2058661_46 ribosomal large subunit export from nucleus - - - 0.000000000000000000000000006653 117.0
BYD3_k127_2058661_47 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000000000017 122.0
BYD3_k127_2058661_48 Hsp20/alpha crystallin family K13993 - - 0.00000000000000000000007509 104.0
BYD3_k127_2058661_49 Belongs to the universal stress protein A family - - - 0.0000000000000000000002523 111.0
BYD3_k127_2058661_5 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 2.767e-241 759.0
BYD3_k127_2058661_50 PFAM Cold-shock protein, DNA-binding - - - 0.0000000000000000000005383 110.0
BYD3_k127_2058661_51 Protein of unknown function (DUF2892) - - - 0.000000000000000000009227 93.0
BYD3_k127_2058661_52 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000004786 96.0
BYD3_k127_2058661_53 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.00000000000000000005587 98.0
BYD3_k127_2058661_54 Domain of unknown function (DUF2383) - - - 0.000000000000000001842 96.0
BYD3_k127_2058661_55 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000009615 83.0
BYD3_k127_2058661_56 Cytochrome c - - - 0.00000000000006886 79.0
BYD3_k127_2058661_57 SMART Transport-associated and nodulation region K04065 - - 0.0000000000001896 78.0
BYD3_k127_2058661_58 Surface antigen - - - 0.0000000000002036 84.0
BYD3_k127_2058661_59 - - - - 0.0000000000003805 79.0
BYD3_k127_2058661_6 phosphatase activity - - - 8.602e-217 689.0
BYD3_k127_2058661_60 - - - - 0.0000000002076 72.0
BYD3_k127_2058661_61 Domain of unknown function (DUF4956) - - - 0.00000000442 66.0
BYD3_k127_2058661_7 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 1.329e-204 654.0
BYD3_k127_2058661_8 Succinyl-CoA ligase like flavodoxin domain - - - 1.881e-201 675.0
BYD3_k127_2058661_9 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 8.077e-194 644.0
BYD3_k127_2063063_0 Heat shock 70 kDa protein K04043 - - 2.605e-258 811.0
BYD3_k127_2063063_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 295.0
BYD3_k127_2063063_2 IstB-like ATP binding protein K02315 - - 0.00000000000000000000000000000000000000000000000000002147 200.0
BYD3_k127_2063063_3 Transcriptional regulator, MerR family K13640 GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000001433 154.0
BYD3_k127_2117671_0 Belongs to the peptidase M16 family K07263 - - 2.768e-216 707.0
BYD3_k127_2117671_1 Berberine and berberine like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005723 500.0
BYD3_k127_2117671_10 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.00000000000000000000000000000000000000008817 160.0
BYD3_k127_2117671_11 dUTP diphosphatase activity K01520,K13038 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23,4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000003276 148.0
BYD3_k127_2117671_12 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.00000000000000000000000000000003961 139.0
BYD3_k127_2117671_13 Polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000000000000003832 119.0
BYD3_k127_2117671_14 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.0000000000000000000000001379 119.0
BYD3_k127_2117671_15 - - - - 0.0000000006215 63.0
BYD3_k127_2117671_16 - - - - 0.00002838 53.0
BYD3_k127_2117671_2 cell shape determining protein MreB K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 481.0
BYD3_k127_2117671_3 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005554 455.0
BYD3_k127_2117671_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 351.0
BYD3_k127_2117671_5 Integral membrane protein TerC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007127 334.0
BYD3_k127_2117671_6 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000409 321.0
BYD3_k127_2117671_7 SMART AAA ATPase K02450 - - 0.00000000000000000000000000000000000000000000000000000000000002014 230.0
BYD3_k127_2117671_8 Protein of unknown function (DUF1499) - - - 0.000000000000000000000000000000000000000000000000000000001532 208.0
BYD3_k127_2117671_9 Ferredoxin K04755 - - 0.0000000000000000000000000000000000000000000000004466 177.0
BYD3_k127_214464_0 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 499.0
BYD3_k127_214464_1 component I K01665 - 2.6.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 429.0
BYD3_k127_214464_10 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000001107 209.0
BYD3_k127_214464_11 Protein of unknown function (DUF447) K09154 - - 0.00000000000000000000000000000000000000000000000001774 188.0
BYD3_k127_214464_12 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000000000001059 179.0
BYD3_k127_214464_13 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000002754 191.0
BYD3_k127_214464_14 xylan catabolic process K03932,K07004 GO:0005575,GO:0005576 - 0.0000000000000000000002925 103.0
BYD3_k127_214464_15 efflux transmembrane transporter activity - - - 0.00000000000006886 79.0
BYD3_k127_214464_16 - - - - 0.00000000005178 70.0
BYD3_k127_214464_17 - - - - 0.0000000006217 67.0
BYD3_k127_214464_18 - - - - 0.0000004185 61.0
BYD3_k127_214464_2 serine-type peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 387.0
BYD3_k127_214464_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 372.0
BYD3_k127_214464_4 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004514 318.0
BYD3_k127_214464_5 protein-glutamate O-methyltransferase activity K00575,K03408,K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000004436 280.0
BYD3_k127_214464_6 transferase activity, transferring glycosyl groups K06984 - 2.4.2.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000006169 271.0
BYD3_k127_214464_7 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000198 254.0
BYD3_k127_214464_8 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002192 266.0
BYD3_k127_214464_9 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000003568 226.0
BYD3_k127_2146229_0 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 329.0
BYD3_k127_2146229_1 Domain of unknown function (DU1801) - - - 0.00000007658 55.0
BYD3_k127_2173983_0 FldA protein K16514 - 5.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 481.0
BYD3_k127_2173983_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K15242,K15975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 332.0
BYD3_k127_2173983_2 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07660 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007945 301.0
BYD3_k127_2173983_3 transcriptional regulator K02624 - - 0.00000000000000000000000000000000000000000000000000000000000000000002026 246.0
BYD3_k127_2173983_4 COG0642 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000002495 238.0
BYD3_k127_2173983_5 alcohol dehydrogenase K00217 - 1.3.1.32 0.000000000000000000000000000000000000000000000000000004647 205.0
BYD3_k127_2173983_6 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000002213 134.0
BYD3_k127_2173983_7 PFAM TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000002845 134.0
BYD3_k127_2173983_8 oxidoreductase activity - - - 0.0000000000000000000000114 115.0
BYD3_k127_2173983_9 Hypothetical methyltransferase - - - 0.00000000000002689 82.0
BYD3_k127_2198258_0 PFAM Multicopper oxidase K06324 - 1.16.3.3 0.00000000000000000000000000000000000000000000000000000000000448 217.0
BYD3_k127_2198258_1 Multicopper oxidase - - - 0.000007562 48.0
BYD3_k127_229367_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009152 397.0
BYD3_k127_229367_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 319.0
BYD3_k127_229367_2 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002223 254.0
BYD3_k127_229367_3 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.000000000000000000000000000000000000000000000000000006049 198.0
BYD3_k127_229367_4 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000006657 185.0
BYD3_k127_229367_5 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000008458 155.0
BYD3_k127_229367_6 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000002662 111.0
BYD3_k127_229367_7 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000004033 113.0
BYD3_k127_229367_8 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000001115 62.0
BYD3_k127_2293803_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 2.324e-244 764.0
BYD3_k127_2293803_1 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009527 591.0
BYD3_k127_2293803_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000001023 159.0
BYD3_k127_2293803_11 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.00000000000000000000000000000000000001568 148.0
BYD3_k127_2293803_12 - - - - 0.000000000000000000000000008429 123.0
BYD3_k127_2293803_13 - - - - 0.0000000000000000000000004461 117.0
BYD3_k127_2293803_14 - - - - 0.0000000000000000000000006366 108.0
BYD3_k127_2293803_15 Translation initiation factor SUI1 K03113 - - 0.00000000000000000000002374 104.0
BYD3_k127_2293803_16 - - - - 0.0000000000000000002637 100.0
BYD3_k127_2293803_17 YjbR - - - 0.0000000000000000007006 96.0
BYD3_k127_2293803_18 YjbR - - - 0.000000000000000005948 93.0
BYD3_k127_2293803_19 - - - - 0.00000000000007472 80.0
BYD3_k127_2293803_2 PQQ-like domain K00114 - 1.1.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 532.0
BYD3_k127_2293803_20 amidohydrolase - - - 0.0000000000002363 82.0
BYD3_k127_2293803_21 Methanol dehydrogenase K06872 - - 0.0000004301 62.0
BYD3_k127_2293803_22 pyrroloquinoline quinone binding K00117 - 1.1.5.2 0.0000005719 61.0
BYD3_k127_2293803_23 cellulase activity K01183,K01728 - 3.2.1.14,4.2.2.2 0.000008083 57.0
BYD3_k127_2293803_24 EF-hand, calcium binding motif - - - 0.0001139 54.0
BYD3_k127_2293803_3 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 334.0
BYD3_k127_2293803_4 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 306.0
BYD3_k127_2293803_5 DNA topological change - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005498 253.0
BYD3_k127_2293803_6 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000003523 246.0
BYD3_k127_2293803_7 - - - - 0.000000000000000000000000000000000000000000000000000000002715 228.0
BYD3_k127_2293803_8 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000001054 191.0
BYD3_k127_2293803_9 Ankyrin repeats (many copies) K06867 - - 0.00000000000000000000000000000000000000008246 156.0
BYD3_k127_2321868_0 ribonuclease inhibitor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 438.0
BYD3_k127_2321868_1 xylan catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000001217 249.0
BYD3_k127_2321868_2 KR domain - - - 0.00000000000000000000000000000000000000000000000000005144 188.0
BYD3_k127_2321868_3 Putative cyclase - - - 0.0000000000000000000000000000000000000002229 162.0
BYD3_k127_2321868_4 COG0491 Zn-dependent hydrolases, including glyoxylases K17837 - 3.5.2.6 0.0000000000000000000000000000000000000004053 158.0
BYD3_k127_2321868_5 phospholipase Carboxylesterase - - - 0.000000000000000000000000000002061 133.0
BYD3_k127_2331517_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009467 477.0
BYD3_k127_2331517_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009232 334.0
BYD3_k127_2331517_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 293.0
BYD3_k127_2331517_3 Stress responsive A/B Barrel Domain - - - 0.000000000000000000000000000002244 122.0
BYD3_k127_2332165_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 4.768e-283 898.0
BYD3_k127_2332165_1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase and related enzymes K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 518.0
BYD3_k127_2332165_2 TIGRFAM exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 345.0
BYD3_k127_2332165_3 xylanase chitin deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 330.0
BYD3_k127_2332165_4 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000002443 235.0
BYD3_k127_2332165_5 Chain length determinant protein - - - 0.00000000000000000000000000000000000000000000001564 185.0
BYD3_k127_2332165_6 Capsular exopolysaccharide family K08252 - 2.7.10.1 0.00000000000000000000000000000001596 140.0
BYD3_k127_2332165_7 23S rRNA-intervening sequence protein - - - 0.0000000000000000000003834 103.0
BYD3_k127_2379259_0 methyltransferase activity K21310 - 2.1.1.334 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 293.0
BYD3_k127_2379259_1 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002813 279.0
BYD3_k127_2379259_2 Protein of unknown function (DUF454) K09790 - - 0.00000000000000004277 88.0
BYD3_k127_2379259_3 Carboxypeptidase regulatory-like domain - - - 0.00000002388 64.0
BYD3_k127_2381099_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000427 166.0
BYD3_k127_2391019_0 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 431.0
BYD3_k127_2391019_1 PFAM ATP-binding region, ATPase domain protein K02668,K07708,K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000123 203.0
BYD3_k127_2391019_2 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.0000000000000000000000000000000003807 135.0
BYD3_k127_2391019_3 Belongs to the UPF0145 family - - - 0.0000000000000000000000000000001789 134.0
BYD3_k127_2391019_4 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000002868 126.0
BYD3_k127_2391019_5 Protein of unknown function (DUF1697) - - - 0.00000000000000002916 93.0
BYD3_k127_2391019_7 ABC transporter C-terminal domain K06158 - - 0.0000000003799 67.0
BYD3_k127_2403842_0 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007223 501.0
BYD3_k127_2403842_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008247 482.0
BYD3_k127_2403842_2 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000007888 235.0
BYD3_k127_2403842_3 phosphoprotein phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000002406 238.0
BYD3_k127_2403842_4 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.0003889 48.0
BYD3_k127_2404410_0 PFAM Type II secretion system protein E K02652 - - 4.817e-230 723.0
BYD3_k127_2404410_1 PFAM magnesium chelatase K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007539 550.0
BYD3_k127_2404410_10 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008504 339.0
BYD3_k127_2404410_11 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 331.0
BYD3_k127_2404410_12 Type ii and iii secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 336.0
BYD3_k127_2404410_13 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 301.0
BYD3_k127_2404410_14 Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006301 297.0
BYD3_k127_2404410_15 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 302.0
BYD3_k127_2404410_16 Belongs to the 'phage' integrase family K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 298.0
BYD3_k127_2404410_17 glyoxalase III activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 293.0
BYD3_k127_2404410_18 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008573 280.0
BYD3_k127_2404410_19 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001521 284.0
BYD3_k127_2404410_2 Glycosyl hydrolase family 57 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 563.0
BYD3_k127_2404410_20 Phosphomannose isomerase type I K01809 - 5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000005626 272.0
BYD3_k127_2404410_21 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007277 272.0
BYD3_k127_2404410_22 Glucosamine-6-phosphate deaminase K02564 - 3.5.99.6 0.000000000000000000000000000000000000000000000000000000000000000000003561 250.0
BYD3_k127_2404410_23 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000001406 231.0
BYD3_k127_2404410_24 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000003464 222.0
BYD3_k127_2404410_25 chromosome segregation K03497 - - 0.00000000000000000000000000000000000000000000000000000000001139 220.0
BYD3_k127_2404410_26 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000003291 208.0
BYD3_k127_2404410_27 MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000003646 207.0
BYD3_k127_2404410_28 BadF BadG BcrA BcrD - GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006040,GO:0006044,GO:0006082,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0045127,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901071,GO:1901135,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000008689 189.0
BYD3_k127_2404410_29 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000001256 183.0
BYD3_k127_2404410_3 TIGRFAM acetaldehyde dehydrogenase (acetylating) K00132 - 1.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 508.0
BYD3_k127_2404410_30 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000000000000000000000001992 168.0
BYD3_k127_2404410_31 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000002138 168.0
BYD3_k127_2404410_32 Carbon dioxide concentrating mechanism carboxysome shell protein K04027 - - 0.0000000000000000000000000000000000000003692 150.0
BYD3_k127_2404410_33 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000000000009169 147.0
BYD3_k127_2404410_34 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000005557 139.0
BYD3_k127_2404410_35 PFAM OmpA MotB domain protein K03640 - - 0.000000000000000000000000000000002376 137.0
BYD3_k127_2404410_36 PFAM PTS system fructose subfamily IIA component K02793 - 2.7.1.191 0.000000000000000000000000000000003507 132.0
BYD3_k127_2404410_37 Type II secretion system protein G K02456 - - 0.00000000000000000000000000003062 126.0
BYD3_k127_2404410_38 PHP domain protein - - - 0.0000000000000000000000000002298 132.0
BYD3_k127_2404410_39 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.00000000000000000000000009633 115.0
BYD3_k127_2404410_4 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 474.0
BYD3_k127_2404410_40 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000002399 99.0
BYD3_k127_2404410_41 Phosphotransferase System K11189 - - 0.00000000000000000003233 99.0
BYD3_k127_2404410_42 Pilus assembly protein K02662 - - 0.000000000000000006137 99.0
BYD3_k127_2404410_43 general secretion pathway protein K02456,K02650 - - 0.0000000000000003243 89.0
BYD3_k127_2404410_44 TIGRFAM tol-pal system protein YbgF - - - 0.0000000000005332 81.0
BYD3_k127_2404410_45 PFAM Fimbrial assembly family protein K02663 - - 0.00000009712 63.0
BYD3_k127_2404410_46 Belongs to the glycosyl hydrolase family 6 K01183 - 3.2.1.14 0.0000004251 64.0
BYD3_k127_2404410_47 cellulose binding K13735 - - 0.000003858 59.0
BYD3_k127_2404410_48 - - - - 0.00001194 56.0
BYD3_k127_2404410_49 - - - - 0.00007082 53.0
BYD3_k127_2404410_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 415.0
BYD3_k127_2404410_50 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K09774 - - 0.0001001 55.0
BYD3_k127_2404410_6 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 421.0
BYD3_k127_2404410_7 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 417.0
BYD3_k127_2404410_8 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 386.0
BYD3_k127_2404410_9 Permease YjgP YjgQ family protein K07091,K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004319 381.0
BYD3_k127_2412026_0 SPTR Tetratricopeptide repeat domain protein - - - 1.856e-201 668.0
BYD3_k127_2412026_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008239 391.0
BYD3_k127_2412026_10 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000188 126.0
BYD3_k127_2412026_11 Polymer-forming cytoskeletal - - - 0.000000000000000000000000001769 118.0
BYD3_k127_2412026_12 Tetratricopeptide repeat - - - 0.000000000000000000000000004105 126.0
BYD3_k127_2412026_13 MASE1 - - - 0.000000000000000000007063 107.0
BYD3_k127_2412026_14 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000001319 97.0
BYD3_k127_2412026_15 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000001005 82.0
BYD3_k127_2412026_16 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) K01083,K01113,K01126 - 3.1.3.1,3.1.3.8,3.1.4.46 0.00000000000001031 89.0
BYD3_k127_2412026_17 - - - - 0.0000000008141 70.0
BYD3_k127_2412026_18 COG2203 FOG GAF domain - - - 0.00001605 57.0
BYD3_k127_2412026_2 Protein of unknown function (DUF1207) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 301.0
BYD3_k127_2412026_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009238 280.0
BYD3_k127_2412026_4 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000007115 240.0
BYD3_k127_2412026_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000003827 239.0
BYD3_k127_2412026_6 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000003035 241.0
BYD3_k127_2412026_7 Subtilase family K08651 - 3.4.21.66 0.00000000000000000000000000000000000000000000000000000000001732 237.0
BYD3_k127_2412026_8 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000001894 195.0
BYD3_k127_2412026_9 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000004949 166.0
BYD3_k127_2592391_0 Glycogen debranching enzyme N terminal - - - 3.594e-272 860.0
BYD3_k127_2592391_1 Uncharacterised protein family (UPF0182) K09118 - - 1.659e-239 769.0
BYD3_k127_2592391_10 WYL domain - - - 0.00000000000000000000000000000000000000000005118 173.0
BYD3_k127_2592391_11 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000000000007954 153.0
BYD3_k127_2592391_12 DinB superfamily - - - 0.00000000000000000001772 99.0
BYD3_k127_2592391_13 Belongs to the HSP15 family K04762 - - 0.000000000000239 75.0
BYD3_k127_2592391_14 - - - - 0.0001269 48.0
BYD3_k127_2592391_2 Domain of unknown function (DUF3459) K01236 - 3.2.1.141 2.622e-237 752.0
BYD3_k127_2592391_3 protein-containing complex disassembly K02837,K07133 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005132 586.0
BYD3_k127_2592391_4 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009045 507.0
BYD3_k127_2592391_5 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255 467.0
BYD3_k127_2592391_6 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009692 285.0
BYD3_k127_2592391_7 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004875 248.0
BYD3_k127_2592391_8 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000001457 230.0
BYD3_k127_2592391_9 SurA N-terminal domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000004252 205.0
BYD3_k127_2613840_0 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 7.86e-247 777.0
BYD3_k127_2613840_1 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000000000000008293 196.0
BYD3_k127_2613840_2 DNA-templated transcription, initiation - - - 0.0000000000000000000008596 107.0
BYD3_k127_2620484_0 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 319.0
BYD3_k127_2620484_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001374 263.0
BYD3_k127_2633687_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 9.957e-302 938.0
BYD3_k127_2633687_1 Belongs to the ClpA ClpB family K03696 - - 3.557e-295 923.0
BYD3_k127_2633687_10 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 483.0
BYD3_k127_2633687_11 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 443.0
BYD3_k127_2633687_12 Exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 419.0
BYD3_k127_2633687_13 Threonine synthase K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 386.0
BYD3_k127_2633687_14 CotH kinase protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 368.0
BYD3_k127_2633687_15 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005001 318.0
BYD3_k127_2633687_16 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009262 312.0
BYD3_k127_2633687_17 tRNA synthetases class I (E and Q), catalytic domain K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 306.0
BYD3_k127_2633687_18 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 287.0
BYD3_k127_2633687_19 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000002749 254.0
BYD3_k127_2633687_2 WD40-like Beta Propeller Repeat - - - 1.346e-245 795.0
BYD3_k127_2633687_20 Putative FMN-binding domain K07734 - - 0.0000000000000000000000000000000000000000000000000000000000000000001695 237.0
BYD3_k127_2633687_21 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000008083 173.0
BYD3_k127_2633687_22 Thioesterase superfamily K10806 - - 0.000000000000000000000000000006465 124.0
BYD3_k127_2633687_23 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896,GO:0051087 - 0.00000000000000000000000000008012 118.0
BYD3_k127_2633687_24 bacterial OsmY and nodulation domain - - - 0.00000000000000000000001913 111.0
BYD3_k127_2633687_25 RNA recognition motif - - - 0.00000000000000002013 92.0
BYD3_k127_2633687_26 Cupin 2, conserved barrel domain protein - - - 0.00000000000000002899 87.0
BYD3_k127_2633687_27 MacB-like periplasmic core domain - - - 0.00000000000005601 79.0
BYD3_k127_2633687_28 bacterial OsmY and nodulation domain - - - 0.00000000000007031 83.0
BYD3_k127_2633687_29 cAMP biosynthetic process K03641 - - 0.0000000000003971 81.0
BYD3_k127_2633687_3 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 1.022e-213 679.0
BYD3_k127_2633687_30 - - - - 0.0000000000006211 80.0
BYD3_k127_2633687_31 - - - - 0.00000000004005 75.0
BYD3_k127_2633687_33 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000009134 71.0
BYD3_k127_2633687_34 Lysylphosphatidylglycerol synthase TM region - - - 0.00000001419 66.0
BYD3_k127_2633687_35 PFAM Tetratricopeptide repeat - - - 0.0000001044 65.0
BYD3_k127_2633687_36 efflux transmembrane transporter activity - - - 0.00001289 53.0
BYD3_k127_2633687_4 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 1.76e-211 682.0
BYD3_k127_2633687_5 Oligopeptidase F K08602 - - 1.004e-197 634.0
BYD3_k127_2633687_6 Aminotransferase K14267,K14287 - 2.6.1.17,2.6.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007408 604.0
BYD3_k127_2633687_7 alginic acid biosynthetic process K01729 - 4.2.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 550.0
BYD3_k127_2633687_8 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000613 531.0
BYD3_k127_2633687_9 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 532.0
BYD3_k127_2636958_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009116 408.0
BYD3_k127_2636958_1 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 296.0
BYD3_k127_2636958_2 Transcriptional regulator K07979 - - 0.0000000000000000000000000000000000008373 142.0
BYD3_k127_2668311_0 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001192 275.0
BYD3_k127_2668311_1 Domain of unknown function (DUF4159) - - - 0.000000000000000000000000000000000000000000000000005296 191.0
BYD3_k127_2668311_10 SnoaL-like domain - - - 0.0000002945 63.0
BYD3_k127_2668311_2 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000001022 183.0
BYD3_k127_2668311_3 - - - - 0.0000000000000000000000000000000000000000000009535 182.0
BYD3_k127_2668311_4 TonB-dependent receptor - - - 0.00000000000000000000000000000000000008066 160.0
BYD3_k127_2668311_5 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000001239 151.0
BYD3_k127_2668311_6 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000001227 134.0
BYD3_k127_2668311_7 Cytochrome c - - - 0.0000000000000000000000000001574 119.0
BYD3_k127_2668311_8 Pfam:DUF556 - - - 0.00000000000000000000000001984 119.0
BYD3_k127_2668311_9 Sigma-70, region 4 K03088 - - 0.000000000003289 76.0
BYD3_k127_2679253_0 Dehydrogenase E1 component K00164,K01616 GO:0000287,GO:0003674,GO:0003824,GO:0004591,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006103,GO:0008150,GO:0008152,GO:0008683,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016624,GO:0016740,GO:0016744,GO:0016829,GO:0016830,GO:0016831,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0019842,GO:0022900,GO:0030312,GO:0030976,GO:0032991,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0045333,GO:0046872,GO:0048037,GO:0050439,GO:0050662,GO:0051186,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:1901363,GO:1901681,GO:1902494,GO:1990204,GO:1990234 1.2.4.2,4.1.1.71 0.0 1056.0
BYD3_k127_2679253_1 topoisomerase K02469 - 5.99.1.3 3.15e-282 888.0
BYD3_k127_2679253_10 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006863 446.0
BYD3_k127_2679253_11 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 447.0
BYD3_k127_2679253_12 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 443.0
BYD3_k127_2679253_13 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005464 443.0
BYD3_k127_2679253_14 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000076 419.0
BYD3_k127_2679253_15 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 427.0
BYD3_k127_2679253_16 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 378.0
BYD3_k127_2679253_17 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 394.0
BYD3_k127_2679253_18 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005667 375.0
BYD3_k127_2679253_19 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 350.0
BYD3_k127_2679253_2 Flavin containing amine oxidoreductase - - - 5.635e-282 873.0
BYD3_k127_2679253_20 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 334.0
BYD3_k127_2679253_21 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005344 308.0
BYD3_k127_2679253_22 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 302.0
BYD3_k127_2679253_23 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 298.0
BYD3_k127_2679253_24 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 303.0
BYD3_k127_2679253_25 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 287.0
BYD3_k127_2679253_26 Glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003846 294.0
BYD3_k127_2679253_27 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007407 300.0
BYD3_k127_2679253_28 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008196 302.0
BYD3_k127_2679253_29 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003 287.0
BYD3_k127_2679253_3 COG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02470,K02622 - 5.99.1.3 2.244e-279 871.0
BYD3_k127_2679253_30 DNA modification - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003524 293.0
BYD3_k127_2679253_31 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001116 257.0
BYD3_k127_2679253_32 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000001116 255.0
BYD3_k127_2679253_33 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000001919 237.0
BYD3_k127_2679253_34 - K06921 - - 0.0000000000000000000000000000000000000000000000000000000000000000004583 244.0
BYD3_k127_2679253_35 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000001652 235.0
BYD3_k127_2679253_36 helicase activity - - - 0.0000000000000000000000000000000000000000000000000000000001266 230.0
BYD3_k127_2679253_37 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000002434 212.0
BYD3_k127_2679253_38 Conserved hypothetical protein (DUF2461) - - - 0.00000000000000000000000000000000000000000000000000003549 198.0
BYD3_k127_2679253_39 DinB family - - - 0.000000000000000000000000000000000000000000000000001448 188.0
BYD3_k127_2679253_4 Aldehyde dehydrogenase family K00294 - 1.2.1.88 5.657e-239 750.0
BYD3_k127_2679253_40 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.000000000000000000000000000000000000000000000000002153 196.0
BYD3_k127_2679253_41 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000004403 159.0
BYD3_k127_2679253_42 domain protein K14194 - - 0.00000000000000000000000000000000000000001126 173.0
BYD3_k127_2679253_43 Prolyl oligopeptidase family K06889 - - 0.0000000000000000000000000000000000000000339 164.0
BYD3_k127_2679253_44 HAMP domain K02482 - 2.7.13.3 0.00000000000000000000000000000000000000006786 162.0
BYD3_k127_2679253_45 methylamine metabolic process K03885,K15977 - 1.6.99.3 0.00000000000000000000000000000000000001202 148.0
BYD3_k127_2679253_46 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000003544 143.0
BYD3_k127_2679253_47 Putative adhesin - - - 0.000000000000000000000000000000001407 143.0
BYD3_k127_2679253_48 BMC - - - 0.0000000000000000000000000000002589 129.0
BYD3_k127_2679253_49 methylamine metabolic process K15977 - - 0.0000000000000000000000000000006946 126.0
BYD3_k127_2679253_5 MatE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 567.0
BYD3_k127_2679253_50 Smr domain - - - 0.00000000000000000000000000004275 121.0
BYD3_k127_2679253_51 domain protein K14194 - - 0.00000000000000000000001324 117.0
BYD3_k127_2679253_52 Putative phosphatase (DUF442) - - - 0.000000000000000000005043 99.0
BYD3_k127_2679253_53 Bacterial DNA-binding protein K03530 - - 0.000000000000000000005881 96.0
BYD3_k127_2679253_54 helix_turn_helix, mercury resistance - - - 0.0000000000000002513 85.0
BYD3_k127_2679253_55 Acetyltransferase (GNAT) family K06976 - - 0.0000000000006082 81.0
BYD3_k127_2679253_56 domain protein K13735,K18491,K20276 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000000000709 72.0
BYD3_k127_2679253_57 Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain K07374 GO:0001966,GO:0003008,GO:0003674,GO:0005198,GO:0005200,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005874,GO:0006996,GO:0007010,GO:0007017,GO:0007600,GO:0007610,GO:0007638,GO:0008150,GO:0009581,GO:0009582,GO:0009605,GO:0009612,GO:0009628,GO:0009987,GO:0015630,GO:0016043,GO:0030424,GO:0031644,GO:0031646,GO:0032101,GO:0032103,GO:0032501,GO:0036477,GO:0040011,GO:0042330,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044057,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0048518,GO:0048520,GO:0048583,GO:0048584,GO:0050789,GO:0050795,GO:0050877,GO:0050896,GO:0050906,GO:0050954,GO:0050974,GO:0050975,GO:0050976,GO:0050982,GO:0051239,GO:0051240,GO:0051606,GO:0051931,GO:0065007,GO:0071840,GO:0097458,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:1905787,GO:1905789,GO:1905790,GO:1905792 - 0.00000003163 63.0
BYD3_k127_2679253_58 - - - - 0.00000005173 64.0
BYD3_k127_2679253_6 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 524.0
BYD3_k127_2679253_60 DNA-templated transcription, initiation K03088 - - 0.00002252 55.0
BYD3_k127_2679253_61 PD-(D/E)XK nuclease superfamily - - - 0.0001944 45.0
BYD3_k127_2679253_7 ATPase domain of DNA mismatch repair MUTS family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 529.0
BYD3_k127_2679253_8 Pyridoxal-dependent decarboxylase conserved domain K01593,K01634 - 4.1.1.105,4.1.1.28,4.1.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009973 517.0
BYD3_k127_2679253_9 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 481.0
BYD3_k127_2685112_0 ATPase associated with various cellular activities, AAA_5 K02584 - - 1.456e-205 657.0
BYD3_k127_2685112_1 Cupin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001445 291.0
BYD3_k127_2685112_2 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000003742 208.0
BYD3_k127_2685112_3 Putative glucoamylase - - - 0.000000000000000000000000000000001713 129.0
BYD3_k127_2685112_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000009435 88.0
BYD3_k127_2685112_5 - - - - 0.00000000007148 68.0
BYD3_k127_2685112_6 Short C-terminal domain K08982 - - 0.00000006726 64.0
BYD3_k127_2685112_7 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000001544 53.0
BYD3_k127_2687297_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008123 388.0
BYD3_k127_2687297_1 - - - - 0.0000000000000000000000000000000000000000000000000004914 189.0
BYD3_k127_2695304_0 MacB-like periplasmic core domain - - - 3.818e-215 703.0
BYD3_k127_2695304_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004247 544.0
BYD3_k127_2695304_2 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 500.0
BYD3_k127_2695304_3 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000001314 141.0
BYD3_k127_2695304_4 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000007877 149.0
BYD3_k127_2695304_5 - - - - 0.0000000000000000003843 94.0
BYD3_k127_2702328_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 8.244e-204 666.0
BYD3_k127_2702328_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 554.0
BYD3_k127_2702328_10 Ferric uptake regulator family K22297 - - 0.000000000000000000000000000000000000000000000000000000002162 204.0
BYD3_k127_2702328_11 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000001817 161.0
BYD3_k127_2702328_12 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000006639 161.0
BYD3_k127_2702328_13 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000002956 149.0
BYD3_k127_2702328_14 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000000000000000000000001159 128.0
BYD3_k127_2702328_15 Glycosyl hydrolase family 57 K22278 - 3.5.1.104 0.0000000000000000000000000009516 121.0
BYD3_k127_2702328_16 DoxX-like family - - - 0.0000000000002573 75.0
BYD3_k127_2702328_17 ABC transporter K01990 - - 0.0000002518 54.0
BYD3_k127_2702328_18 - - - - 0.000008518 51.0
BYD3_k127_2702328_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000065 530.0
BYD3_k127_2702328_3 PQQ enzyme repeat K05889,K12132 - 1.1.2.6,2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006235 471.0
BYD3_k127_2702328_4 PFAM Cation K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 445.0
BYD3_k127_2702328_5 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005797 448.0
BYD3_k127_2702328_6 polyphosphate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 383.0
BYD3_k127_2702328_7 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005924 278.0
BYD3_k127_2702328_8 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000002898 252.0
BYD3_k127_2702328_9 protein methyltransferase activity K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000001643 239.0
BYD3_k127_2826961_0 Belongs to the argininosuccinate synthase family. Type 2 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 1.506e-221 690.0
BYD3_k127_2826961_1 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 445.0
BYD3_k127_2826961_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007802 448.0
BYD3_k127_2826961_3 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 377.0
BYD3_k127_2826961_4 Trehalose utilisation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 384.0
BYD3_k127_2826961_5 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000003235 208.0
BYD3_k127_290378_0 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005433 585.0
BYD3_k127_290378_1 ATPases associated with a variety of cellular activities K05847 GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0031460,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0072337 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 305.0
BYD3_k127_290378_2 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000001939 232.0
BYD3_k127_290378_3 - - - - 0.0000000000000000000000000000000000000000000000000000000003038 216.0
BYD3_k127_290378_4 DinB family - - - 0.000000000000000000000000009297 115.0
BYD3_k127_290378_5 - - - - 0.0000000000000000000000001188 118.0
BYD3_k127_290378_6 Putative prokaryotic signal transducing protein - - - 0.00000000000000000005693 101.0
BYD3_k127_290378_7 TIGRFAM polymorphic outer membrane protein - - - 0.000000000007533 79.0
BYD3_k127_2935143_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006786 632.0
BYD3_k127_2942840_0 Glycosyltransferase like family K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 563.0
BYD3_k127_2942840_1 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009093 497.0
BYD3_k127_2942840_10 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000001084 217.0
BYD3_k127_2942840_11 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000008006 210.0
BYD3_k127_2942840_12 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000009676 220.0
BYD3_k127_2942840_13 macromolecule localization K09690 - - 0.000000000000000000000000000000000000000000000000000004519 199.0
BYD3_k127_2942840_14 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000007166 201.0
BYD3_k127_2942840_15 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000001176 193.0
BYD3_k127_2942840_16 Glycosyltransferase like family 2 K07011 - - 0.000000000000000000000000000000000000000000000001185 187.0
BYD3_k127_2942840_17 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000006128 118.0
BYD3_k127_2942840_18 beta-propeller repeat - - - 0.0000000000000004383 90.0
BYD3_k127_2942840_2 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 398.0
BYD3_k127_2942840_20 Tetratricopeptide TPR_2 repeat protein - - - 0.000003977 60.0
BYD3_k127_2942840_3 PFAM glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001086 273.0
BYD3_k127_2942840_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003469 258.0
BYD3_k127_2942840_5 Wzt C-terminal domain K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000004642 244.0
BYD3_k127_2942840_6 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000006168 243.0
BYD3_k127_2942840_7 ADP-glyceromanno-heptose 6-epimerase activity K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000001478 239.0
BYD3_k127_2942840_8 polysaccharide catabolic process K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000002365 251.0
BYD3_k127_2942840_9 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000002096 231.0
BYD3_k127_2945063_0 Thiamine pyrophosphate protein TPP binding domain protein K01652 - 2.2.1.6 3.168e-278 866.0
BYD3_k127_2945063_1 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 4.613e-263 819.0
BYD3_k127_2945063_10 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000005289 214.0
BYD3_k127_2945063_11 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000002952 234.0
BYD3_k127_2945063_12 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000001879 201.0
BYD3_k127_2945063_13 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.182 0.00000000000000000000000000000000000000000000000000000002093 213.0
BYD3_k127_2945063_14 Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000663 200.0
BYD3_k127_2945063_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000007055 160.0
BYD3_k127_2945063_16 Methyltransferase K08316 - 2.1.1.171 0.0000000000000000000000000000001321 133.0
BYD3_k127_2945063_17 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000000000000000000000000004168 120.0
BYD3_k127_2945063_18 Zincin-like metallopeptidase K00930 - 2.7.2.8 0.0000000000000000000000000007303 117.0
BYD3_k127_2945063_19 CoA-binding protein K06929 - - 0.00000000000000000000000004533 122.0
BYD3_k127_2945063_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.518e-200 646.0
BYD3_k127_2945063_20 - - - - 0.0000000000000000000008152 99.0
BYD3_k127_2945063_21 Periplasmic or secreted lipoprotein - - - 0.0000000000000000007072 96.0
BYD3_k127_2945063_22 protocatechuate 3,4-dioxygenase activity - - - 0.00000000008147 76.0
BYD3_k127_2945063_23 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.00003241 48.0
BYD3_k127_2945063_3 Protein tyrosine kinase K12132 - 2.7.11.1 3.243e-199 659.0
BYD3_k127_2945063_4 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004653 486.0
BYD3_k127_2945063_5 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 467.0
BYD3_k127_2945063_6 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 443.0
BYD3_k127_2945063_7 PFAM Aminotransferase class I and II K00812,K10907,K14267 - 2.6.1.1,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 342.0
BYD3_k127_2945063_8 domain, Protein K15125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007011 325.0
BYD3_k127_2945063_9 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000001265 258.0
BYD3_k127_2947438_0 ATPase associated with various cellular activities, AAA_5 K02584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 297.0
BYD3_k127_2947438_1 - - - - 0.000000000000000000000000000003096 122.0
BYD3_k127_2947438_2 OsmC-like protein - - - 0.000000000000000000000001642 111.0
BYD3_k127_2947438_3 OsmC-like protein - - - 0.00000000000000009618 87.0
BYD3_k127_2969136_0 Tannase and feruloyl esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 503.0
BYD3_k127_2969136_1 glucose sorbosone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 374.0
BYD3_k127_2969136_2 Lysin motif - - - 0.000000000000000000000000000000000000000000000000004077 192.0
BYD3_k127_2969136_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000009552 198.0
BYD3_k127_2969136_4 - - - - 0.0000000000000000000000000000000000000000009301 177.0
BYD3_k127_2969136_5 - - - - 0.00000000000000000000000000000003169 145.0
BYD3_k127_2969136_7 - - - - 0.00000000000000000001579 95.0
BYD3_k127_2971110_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000002958 214.0
BYD3_k127_2971110_1 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000000000000000000000000000000000000005497 211.0
BYD3_k127_2971110_2 Serine hydrolase involved in the detoxification of formaldehyde - - - 0.00000000000000000000000004659 115.0
BYD3_k127_2979267_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.117e-262 824.0
BYD3_k127_2979267_1 Peptidase family M1 domain K01256 - 3.4.11.2 2.396e-239 766.0
BYD3_k127_2979267_10 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 412.0
BYD3_k127_2979267_11 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004757 399.0
BYD3_k127_2979267_12 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 392.0
BYD3_k127_2979267_13 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004705 355.0
BYD3_k127_2979267_14 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 349.0
BYD3_k127_2979267_15 ABC-type uncharacterized transport system K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 346.0
BYD3_k127_2979267_16 Spore coat protein CotH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000583 337.0
BYD3_k127_2979267_17 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 326.0
BYD3_k127_2979267_18 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007072 319.0
BYD3_k127_2979267_19 D-isomer specific 2-hydroxyacid dehydrogenase K00015 - 1.1.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 312.0
BYD3_k127_2979267_2 PFAM glycine cleavage T protein (aminomethyl transferase) - - - 3.808e-201 638.0
BYD3_k127_2979267_20 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 308.0
BYD3_k127_2979267_21 Peptidase family M50 K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 306.0
BYD3_k127_2979267_22 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 290.0
BYD3_k127_2979267_23 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001366 289.0
BYD3_k127_2979267_24 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002426 283.0
BYD3_k127_2979267_25 acid phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005257 277.0
BYD3_k127_2979267_26 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K04068,K10026 - 1.97.1.4,4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002087 271.0
BYD3_k127_2979267_27 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001214 280.0
BYD3_k127_2979267_28 PFAM asparagine synthase K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003543 268.0
BYD3_k127_2979267_29 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004323 262.0
BYD3_k127_2979267_3 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 4.192e-196 645.0
BYD3_k127_2979267_30 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000002007 264.0
BYD3_k127_2979267_31 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000003955 256.0
BYD3_k127_2979267_32 Protein of unknown function (DUF2400) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006009 263.0
BYD3_k127_2979267_33 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000001623 258.0
BYD3_k127_2979267_34 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001745 247.0
BYD3_k127_2979267_35 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000000000000000003219 246.0
BYD3_k127_2979267_36 Belongs to the proline racemase family K01777 - 5.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000003311 251.0
BYD3_k127_2979267_37 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000008668 239.0
BYD3_k127_2979267_38 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000000001389 241.0
BYD3_k127_2979267_39 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000169 246.0
BYD3_k127_2979267_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 622.0
BYD3_k127_2979267_40 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000005382 232.0
BYD3_k127_2979267_41 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000006048 233.0
BYD3_k127_2979267_42 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000724 224.0
BYD3_k127_2979267_43 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000002146 216.0
BYD3_k127_2979267_44 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000005244 216.0
BYD3_k127_2979267_45 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000542 215.0
BYD3_k127_2979267_46 Polysaccharide lyase family 4, domain II - - - 0.0000000000000000000000000000000000000000000000000000000009021 213.0
BYD3_k127_2979267_47 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000001379 203.0
BYD3_k127_2979267_48 FR47-like protein - - - 0.000000000000000000000000000000000000000000000000000001883 195.0
BYD3_k127_2979267_49 HD domain - - - 0.0000000000000000000000000000000000000000000000000009723 204.0
BYD3_k127_2979267_5 Heavy metal translocating P-type atpase K01534 - 3.6.3.3,3.6.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 582.0
BYD3_k127_2979267_50 arylsulfatase A - - - 0.00000000000000000000000000000000000000000000005825 194.0
BYD3_k127_2979267_51 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000003981 178.0
BYD3_k127_2979267_52 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000004622 185.0
BYD3_k127_2979267_53 Toxic component of a toxin-antitoxin (TA) module. An RNase K19686 - - 0.0000000000000000000000000000000000000000000007408 168.0
BYD3_k127_2979267_54 Cytochrome oxidase assembly protein K02259 - - 0.0000000000000000000000000000000000000000003394 178.0
BYD3_k127_2979267_55 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000000000000000000817 170.0
BYD3_k127_2979267_56 AcrB/AcrD/AcrF family K03296 - - 0.00000000000000000000000000000000000000003784 171.0
BYD3_k127_2979267_57 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000001003 163.0
BYD3_k127_2979267_58 Protein of unknown function (DUF420) - - - 0.0000000000000000000000000000000000000005644 155.0
BYD3_k127_2979267_59 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000005268 155.0
BYD3_k127_2979267_6 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 509.0
BYD3_k127_2979267_60 ethanolamine catabolic process K04027 - - 0.00000000000000000000000000000000000006923 144.0
BYD3_k127_2979267_61 alpha beta - - - 0.00000000000000000000000000000000009023 144.0
BYD3_k127_2979267_62 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000312 144.0
BYD3_k127_2979267_63 Domain of unknown function (DUF4340) - - - 0.000000000000000000000000000000003922 144.0
BYD3_k127_2979267_64 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000007685 133.0
BYD3_k127_2979267_65 PFAM phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.000000000000000000000000000006712 128.0
BYD3_k127_2979267_66 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000007711 127.0
BYD3_k127_2979267_67 Transcription factor K19687 - - 0.00000000000000000000000000004453 119.0
BYD3_k127_2979267_68 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028,K08697 - - 0.000000000000000000000000007956 111.0
BYD3_k127_2979267_7 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 462.0
BYD3_k127_2979267_70 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.00000000000000000000001583 107.0
BYD3_k127_2979267_71 Ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.00000000000000000005725 92.0
BYD3_k127_2979267_72 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000001864 94.0
BYD3_k127_2979267_73 PFAM YbbR family protein - - - 0.000000000000000001944 98.0
BYD3_k127_2979267_75 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000001227 97.0
BYD3_k127_2979267_76 ECF sigma factor - - - 0.00000000000000005724 89.0
BYD3_k127_2979267_77 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.000000000000006363 81.0
BYD3_k127_2979267_78 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000001489 88.0
BYD3_k127_2979267_8 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 446.0
BYD3_k127_2979267_80 nuclease activity K07062 - - 0.00000000005825 64.0
BYD3_k127_2979267_81 - - - - 0.0000000006324 70.0
BYD3_k127_2979267_82 von Willebrand factor, type A K07114 - - 0.000000001284 70.0
BYD3_k127_2979267_83 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000001252 59.0
BYD3_k127_2979267_84 Tfp pilus assembly protein FimV - - - 0.00000002455 65.0
BYD3_k127_2979267_85 peptidyl-tyrosine sulfation - - - 0.0000002568 61.0
BYD3_k127_2979267_86 Lysylphosphatidylglycerol synthase TM region - - - 0.000000313 63.0
BYD3_k127_2979267_87 Heat shock 70 kDa protein K04043 - - 0.0000004853 60.0
BYD3_k127_2979267_88 SMART TRASH domain protein - - - 0.000001003 53.0
BYD3_k127_2979267_89 Diguanylate cyclase - - - 0.000003821 57.0
BYD3_k127_2979267_9 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 427.0
BYD3_k127_2979267_91 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000005466 49.0
BYD3_k127_2979267_92 Sulfatase - - - 0.0000116 57.0
BYD3_k127_2979267_93 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.0000117 50.0
BYD3_k127_2979267_94 Alpha Beta K06889 - - 0.00001867 56.0
BYD3_k127_2979267_95 Flp pilus assembly protein, pilin Flp K02651 - - 0.0002377 46.0
BYD3_k127_2992250_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 407.0
BYD3_k127_2992250_1 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 398.0
BYD3_k127_2992250_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009967 364.0
BYD3_k127_2992250_3 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000000000002079 156.0
BYD3_k127_2992250_4 PFAM transcriptional regulator PadR family protein - - - 0.000000000000000000000000000000000000005026 147.0
BYD3_k127_2992250_5 - - - - 0.00000000000000000000000000000000002991 147.0
BYD3_k127_2992250_6 Major facilitator Superfamily - - - 0.000000000000000000000000000419 115.0
BYD3_k127_2994341_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 8.485e-277 865.0
BYD3_k127_2994341_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 - 3.6.3.4 3.722e-266 838.0
BYD3_k127_2994341_2 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 3.807e-218 695.0
BYD3_k127_2994341_3 - - - - 0.000000000000000000000000000000000000000003064 166.0
BYD3_k127_2994341_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000003524 135.0
BYD3_k127_2994341_5 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.000000000000000000000002352 104.0
BYD3_k127_2994341_6 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes - - - 0.0000000000000000000003775 98.0
BYD3_k127_2994341_7 PRC-barrel domain - - - 0.00001773 54.0
BYD3_k127_3012301_0 PFAM Peptidase M20 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005488 471.0
BYD3_k127_3012301_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009662 445.0
BYD3_k127_3012301_10 LysR substrate binding domain K21703,K21711 - - 0.00000000000000000000000000000000000000009683 162.0
BYD3_k127_3012301_11 DinB family - - - 0.000000000000000000000000000000000000000409 155.0
BYD3_k127_3012301_12 Belongs to the peptidase S11 family K07262 - - 0.0000000000000000000000000000000000000005738 163.0
BYD3_k127_3012301_13 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000001107 153.0
BYD3_k127_3012301_14 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000006962 154.0
BYD3_k127_3012301_15 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000002257 138.0
BYD3_k127_3012301_16 - - - - 0.000000000000000000000001751 114.0
BYD3_k127_3012301_17 PFAM O-methyltransferase - - - 0.000000000000000000000008925 111.0
BYD3_k127_3012301_18 Necessary for formate dehydrogenase activity K02380 - - 0.0000000000000000169 93.0
BYD3_k127_3012301_19 oxidoreductase activity - - - 0.000000000000001777 89.0
BYD3_k127_3012301_2 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 406.0
BYD3_k127_3012301_20 transcriptional K07671 GO:0000287,GO:0003674,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0043167,GO:0043169,GO:0044110,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0051704,GO:0071944 - 0.00000000000002141 79.0
BYD3_k127_3012301_21 ester cyclase - - - 0.0000002176 59.0
BYD3_k127_3012301_3 Starch synthase catalytic domain K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006551 407.0
BYD3_k127_3012301_4 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 359.0
BYD3_k127_3012301_5 Belongs to the arginase family K01476 - 3.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 319.0
BYD3_k127_3012301_6 PFAM DNA methylase N-4 N-6 domain protein K00571 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008012 319.0
BYD3_k127_3012301_7 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 299.0
BYD3_k127_3012301_8 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000001656 190.0
BYD3_k127_3012301_9 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000001203 189.0
BYD3_k127_3016357_0 Phospholipid methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003932 338.0
BYD3_k127_3016357_1 - - - - 0.000000000000000000000000000000000000000000000000000000006276 211.0
BYD3_k127_3016357_2 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000002889 209.0
BYD3_k127_3016357_3 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000009362 207.0
BYD3_k127_3016357_4 Protein of unknown function DUF86 - - - 0.00000000000000000000000000004792 123.0
BYD3_k127_3016357_5 Histidine kinase K07777 - 2.7.13.3 0.0000000000000000000000004238 108.0
BYD3_k127_3016357_6 - - - - 0.000000000000000000000006743 111.0
BYD3_k127_3016357_7 PFAM DNA polymerase beta domain protein region K07076 - - 0.00000000000000000000008364 101.0
BYD3_k127_3016357_8 - - - - 0.0000000000000007482 83.0
BYD3_k127_3016357_9 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K20919 - - 0.00003201 52.0
BYD3_k127_3034839_0 Aminotransferase class-III K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007983 532.0
BYD3_k127_3034839_1 Domain of unknown function (DUF4921) K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 452.0
BYD3_k127_3034839_10 Domain of unknown function (DUF1844) - - - 0.000000000000000265 83.0
BYD3_k127_3034839_12 SMART Transport-associated and nodulation - - - 0.000003532 55.0
BYD3_k127_3034839_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009248 435.0
BYD3_k127_3034839_3 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000004187 271.0
BYD3_k127_3034839_4 MazG nucleotide pyrophosphohydrolase domain K02499,K04765 - 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000008597 259.0
BYD3_k127_3034839_5 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000003814 257.0
BYD3_k127_3034839_6 Competence protein ComEC K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000002679 254.0
BYD3_k127_3034839_7 Protein of unknown function, DUF481 - - - 0.0000000000000000000000000000000000007883 153.0
BYD3_k127_3034839_8 PFAM von Willebrand factor type A - - - 0.000000000000000000000000000528 122.0
BYD3_k127_3034839_9 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000008884 109.0
BYD3_k127_3055527_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000001886 144.0
BYD3_k127_3055527_2 Toxic component of a toxin-antitoxin (TA) module. An RNase K07062 - - 0.00000000000000000000000000002788 121.0
BYD3_k127_3055527_3 - - - - 0.0000000004938 63.0
BYD3_k127_3055527_4 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.00004342 49.0
BYD3_k127_3109148_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 1.899e-242 758.0
BYD3_k127_3109148_1 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 603.0
BYD3_k127_3109148_10 Integrase core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008885 424.0
BYD3_k127_3109148_11 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 383.0
BYD3_k127_3109148_12 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 365.0
BYD3_k127_3109148_13 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 369.0
BYD3_k127_3109148_14 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 347.0
BYD3_k127_3109148_15 unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 338.0
BYD3_k127_3109148_16 response to abiotic stimulus K06867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 348.0
BYD3_k127_3109148_17 hydro-lyase, Fe-S type, tartrate fumarate subfamily, alpha subunit K01677 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 322.0
BYD3_k127_3109148_18 ABC transporter K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 298.0
BYD3_k127_3109148_19 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001788 271.0
BYD3_k127_3109148_2 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 550.0
BYD3_k127_3109148_20 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002247 263.0
BYD3_k127_3109148_21 KR domain K00019 - 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000003357 252.0
BYD3_k127_3109148_22 Belongs to the peptidase S8 family K14645 - - 0.00000000000000000000000000000000000000000000000000000000000002181 236.0
BYD3_k127_3109148_23 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000003296 216.0
BYD3_k127_3109148_24 lactoylglutathione lyase activity K03088 - - 0.000000000000000000000000000000000000000000000000000000000413 212.0
BYD3_k127_3109148_25 - - - - 0.0000000000000000000000000000000000000000000000000002198 198.0
BYD3_k127_3109148_26 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000000008103 178.0
BYD3_k127_3109148_27 Fumarase C-terminus K01678 - 4.2.1.2 0.00000000000000000000000000000000000000000002417 168.0
BYD3_k127_3109148_28 - - - - 0.0000000000000000000000000000000000000003779 161.0
BYD3_k127_3109148_29 - - - - 0.000000000000000000000000000000000000007896 159.0
BYD3_k127_3109148_3 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003916 542.0
BYD3_k127_3109148_30 - - - - 0.0000000000000000000000000000000000001624 160.0
BYD3_k127_3109148_31 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.000000000000000000000000000000000004243 153.0
BYD3_k127_3109148_32 cellular response to DNA damage stimulus K07340 - - 0.000000000000000000000000000000002143 136.0
BYD3_k127_3109148_33 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000002773 127.0
BYD3_k127_3109148_34 long-chain fatty acid transporting porin activity K09806 - - 0.000000000000000000000000002066 112.0
BYD3_k127_3109148_35 Protein of unknown function (DUF3738) - - - 0.0000000000000000000000003782 116.0
BYD3_k127_3109148_36 PFAM Cupin 2, conserved barrel domain protein - - - 0.000000000000000000002242 100.0
BYD3_k127_3109148_37 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000001143 105.0
BYD3_k127_3109148_38 transposase activity - - - 0.0000000000001069 71.0
BYD3_k127_3109148_39 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.0002221 53.0
BYD3_k127_3109148_4 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 527.0
BYD3_k127_3109148_5 PQQ-like domain K05889 - 1.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000538 521.0
BYD3_k127_3109148_6 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 516.0
BYD3_k127_3109148_7 PQQ-like domain K00114 - 1.1.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007217 501.0
BYD3_k127_3109148_8 PFAM Band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004426 452.0
BYD3_k127_3109148_9 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 446.0
BYD3_k127_3131284_0 Amidohydrolase K03392,K10220 - 4.1.1.45,4.2.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007014 524.0
BYD3_k127_3131284_1 ribonuclease inhibitor activity K10218 - 4.1.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 321.0
BYD3_k127_3131284_2 Domain of unknown function (DUF1932) - - - 0.00000000000000000000000000000000000000000000000000000000000003422 224.0
BYD3_k127_3131284_3 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000008252 191.0
BYD3_k127_3131284_4 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000009332 181.0
BYD3_k127_3131284_5 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000000000000112 161.0
BYD3_k127_3131284_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000319 66.0
BYD3_k127_3131284_7 Carboxypeptidase regulatory-like domain - - - 0.0000000000454 72.0
BYD3_k127_3131284_8 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000008929 53.0
BYD3_k127_3178927_0 4-oxalomesaconate hydratase K10220 - 4.2.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 565.0
BYD3_k127_3178927_1 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 530.0
BYD3_k127_3178927_2 - - - - 0.0000000000000000003601 96.0
BYD3_k127_3195785_0 Cytochrome C oxidase, cbb3-type, subunit III K19713 - 1.8.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000002444 259.0
BYD3_k127_3264479_0 FAD binding domain K03391,K05712 - 1.14.13.127,1.14.13.50 8.347e-263 818.0
BYD3_k127_3264479_1 PFAM FAD linked oxidase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 461.0
BYD3_k127_3264479_10 Pyridoxamine 5'-phosphate oxidase K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000105 199.0
BYD3_k127_3264479_11 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.0000000000000000000000000000000000000000000000111 178.0
BYD3_k127_3264479_12 - - - - 0.0000000000000000000000000000000000000625 149.0
BYD3_k127_3264479_13 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000004225 139.0
BYD3_k127_3264479_15 - - - - 0.0000000000000000000004433 104.0
BYD3_k127_3264479_16 Domain of unknown function (DUF378) - - - 0.00000000000000003243 87.0
BYD3_k127_3264479_17 phytanoyl-CoA dioxygenase - - - 0.000000000001839 70.0
BYD3_k127_3264479_18 oxidoreductase K07222 - - 0.00000002085 64.0
BYD3_k127_3264479_19 CAAX protease self-immunity - - - 0.00000003399 60.0
BYD3_k127_3264479_2 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 435.0
BYD3_k127_3264479_3 cAMP biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005847 432.0
BYD3_k127_3264479_4 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000713 387.0
BYD3_k127_3264479_5 membrane protein, TerC K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 377.0
BYD3_k127_3264479_6 Transcriptional regulator K03717 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007673 357.0
BYD3_k127_3264479_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001859 279.0
BYD3_k127_3264479_8 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001 304.0
BYD3_k127_3264479_9 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006317 281.0
BYD3_k127_3276933_0 Amino acid adenylation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 475.0
BYD3_k127_3276933_1 Non-ribosomal peptide synthetase modules and related - - - 0.000000000000000000000000000000004434 131.0
BYD3_k127_3279178_0 arylsulfatase activity K01132 - 3.1.6.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005624 526.0
BYD3_k127_3279178_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 476.0
BYD3_k127_3279178_2 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 424.0
BYD3_k127_3279178_3 Carboxylesterase family K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 388.0
BYD3_k127_3279178_4 Protein of unknown function (DUF3750) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003862 282.0
BYD3_k127_3279178_5 transport - - - 0.00000000000000000000000000000000000000000419 179.0
BYD3_k127_3279178_6 - - - - 0.0000000000000000000000000000000000000207 158.0
BYD3_k127_3279178_7 - - - - 0.0000000000000000000009963 100.0
BYD3_k127_3279178_8 SMART RNA-processing protein HAT helix repeating-containing protein - - - 0.000000000003973 80.0
BYD3_k127_3329849_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000001669 156.0
BYD3_k127_3332572_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 614.0
BYD3_k127_3332572_1 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 434.0
BYD3_k127_3332572_2 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 434.0
BYD3_k127_3332572_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 376.0
BYD3_k127_3332572_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 357.0
BYD3_k127_3332572_5 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 309.0
BYD3_k127_3332572_6 (AIR) carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000513 267.0
BYD3_k127_3332572_7 Ribosomal protein L7/L12 C-terminal domain - - - 0.00000000003904 68.0
BYD3_k127_3332572_8 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000004657 60.0
BYD3_k127_3344188_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 1.238e-280 874.0
BYD3_k127_3344188_1 Bacterial transferase hexapeptide (six repeats) - - - 9.831e-222 700.0
BYD3_k127_3344188_10 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002794 453.0
BYD3_k127_3344188_11 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 461.0
BYD3_k127_3344188_12 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 439.0
BYD3_k127_3344188_13 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 436.0
BYD3_k127_3344188_14 Belongs to the DegT DnrJ EryC1 family K12452,K13010 - 1.17.1.1,2.6.1.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 418.0
BYD3_k127_3344188_15 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 423.0
BYD3_k127_3344188_16 penicillin-binding protein, 1A family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 409.0
BYD3_k127_3344188_17 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007821 389.0
BYD3_k127_3344188_18 PFAM Glycosyl transferase family 2 K10012,K20534 - 2.4.2.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 370.0
BYD3_k127_3344188_19 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006509 361.0
BYD3_k127_3344188_2 Bacterial transcriptional activator domain - - - 4.841e-196 646.0
BYD3_k127_3344188_20 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 341.0
BYD3_k127_3344188_21 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 326.0
BYD3_k127_3344188_22 Nodulation protein S (NodS) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 308.0
BYD3_k127_3344188_23 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001476 291.0
BYD3_k127_3344188_24 ATPases associated with a variety of cellular activities K09689,K09691 - 3.6.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002015 300.0
BYD3_k127_3344188_25 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004939 285.0
BYD3_k127_3344188_26 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004233 276.0
BYD3_k127_3344188_27 ATPases associated with a variety of cellular activities K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000111 270.0
BYD3_k127_3344188_28 Pyridoxal phosphate biosynthetic protein PdxA K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000000000000002136 269.0
BYD3_k127_3344188_29 ABC-2 type transporter K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000004689 241.0
BYD3_k127_3344188_3 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5,6.3.5.1 6.802e-194 619.0
BYD3_k127_3344188_30 PFAM sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000009838 231.0
BYD3_k127_3344188_31 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000003144 226.0
BYD3_k127_3344188_32 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000003504 228.0
BYD3_k127_3344188_33 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.00000000000000000000000000000000000000000000000000000003323 209.0
BYD3_k127_3344188_34 PFAM aminotransferase, class I K10907 - - 0.0000000000000000000000000000000000000000000000000000006135 207.0
BYD3_k127_3344188_35 Nodulation protein S (NodS) - - - 0.000000000000000000000000000000000000000000000000000007763 205.0
BYD3_k127_3344188_36 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0070930,GO:0071704,GO:0097159,GO:1901363,GO:1901564 - 0.0000000000000000000000000000000000000000000000001426 182.0
BYD3_k127_3344188_37 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000002591 188.0
BYD3_k127_3344188_38 Bacterial transferase hexapeptide (six repeats) K13006,K15673,K15894 - 4.2.1.115 0.000000000000000000000000000000000000000000000003762 182.0
BYD3_k127_3344188_39 DNA polymerase III K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000001994 190.0
BYD3_k127_3344188_4 alginic acid biosynthetic process K01729 - 4.2.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 618.0
BYD3_k127_3344188_40 - - - - 0.0000000000000000000000000000000000000000000006321 179.0
BYD3_k127_3344188_41 methyltransferase - - - 0.00000000000000000000000000000000000000000004085 174.0
BYD3_k127_3344188_42 Transport permease protein - - - 0.0000000000000000000000000000000000000000002261 171.0
BYD3_k127_3344188_43 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000009221 162.0
BYD3_k127_3344188_44 TIGRFAM methyltransferase FkbM family - - - 0.00000000000000000000000000000000000000331 158.0
BYD3_k127_3344188_45 - - - - 0.00000000000000000000000000000000002897 152.0
BYD3_k127_3344188_46 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000000006783 140.0
BYD3_k127_3344188_47 Glycosyl transferase family 2 - - - 0.000000000000000000000000000001809 137.0
BYD3_k127_3344188_48 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13599 - - 0.00000000000000000000000000006253 128.0
BYD3_k127_3344188_49 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000000000003137 123.0
BYD3_k127_3344188_5 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 537.0
BYD3_k127_3344188_50 - - - - 0.0000000000000000000000001348 111.0
BYD3_k127_3344188_51 Winged helix-turn-helix DNA-binding - - - 0.00000000000000000000006685 107.0
BYD3_k127_3344188_52 - - - - 0.0000000000000000000004458 107.0
BYD3_k127_3344188_54 - - - - 0.000000000000000000006876 105.0
BYD3_k127_3344188_55 transferase activity, transferring glycosyl groups - - - 0.00000000000000000002999 104.0
BYD3_k127_3344188_57 transferase activity, transferring glycosyl groups - - - 0.000000000000000443 92.0
BYD3_k127_3344188_58 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000352 82.0
BYD3_k127_3344188_6 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 539.0
BYD3_k127_3344188_60 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000009475 72.0
BYD3_k127_3344188_61 Amb_all - - - 0.0000000000119 78.0
BYD3_k127_3344188_62 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.000000003686 70.0
BYD3_k127_3344188_63 Metallo-beta-lactamase superfamily - - - 0.00000004502 62.0
BYD3_k127_3344188_64 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.00000009584 54.0
BYD3_k127_3344188_66 bacterial OsmY and nodulation domain K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.000003047 55.0
BYD3_k127_3344188_67 Methyltransferase type 11 - - - 0.000003291 59.0
BYD3_k127_3344188_68 - - - - 0.00001738 57.0
BYD3_k127_3344188_69 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00003329 51.0
BYD3_k127_3344188_7 COG0367 Asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 524.0
BYD3_k127_3344188_70 Two component transcriptional regulator, winged helix family K02483 - - 0.00005146 53.0
BYD3_k127_3344188_8 Male sterility protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 502.0
BYD3_k127_3344188_9 Belongs to the DegT DnrJ EryC1 family K02805 - 2.6.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 454.0
BYD3_k127_3349304_0 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K04099 - 1.13.11.57 1.793e-208 659.0
BYD3_k127_3349304_1 PFAM Aminotransferase class I and II K14267 - 2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 532.0
BYD3_k127_3349304_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001222 268.0
BYD3_k127_3349304_11 HEAT repeats - - - 0.000000000000000000000000000000000000000000000000000000000000001418 235.0
BYD3_k127_3349304_12 - - - - 0.000000000000000000000000000000000000000000000000000000001809 208.0
BYD3_k127_3349304_13 carboxymuconolactone decarboxylase K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000000000000001355 201.0
BYD3_k127_3349304_14 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000462 191.0
BYD3_k127_3349304_15 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000002066 186.0
BYD3_k127_3349304_16 Gluconokinase K00851 - 2.7.1.12 0.00000000000000000000000000000000000000005488 157.0
BYD3_k127_3349304_17 - - - - 0.0000000000000000000000000000000006666 146.0
BYD3_k127_3349304_18 - - - - 0.00000000000000000000000001069 121.0
BYD3_k127_3349304_19 PBS lyase HEAT-like repeat - - - 0.000000000000000000000000194 123.0
BYD3_k127_3349304_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 486.0
BYD3_k127_3349304_20 - - - - 0.00000000000000000001538 105.0
BYD3_k127_3349304_21 Domain of unknown function (DUF4382) - - - 0.00000002623 64.0
BYD3_k127_3349304_22 - - - - 0.000000963 57.0
BYD3_k127_3349304_23 - - - - 0.000009616 55.0
BYD3_k127_3349304_24 - - - - 0.00003397 56.0
BYD3_k127_3349304_25 Transcriptional activator of acetoin glycerol metabolism K21405 - - 0.0001242 52.0
BYD3_k127_3349304_3 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006496 474.0
BYD3_k127_3349304_4 Bacterial protein of unknown function (DUF839) K07093 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005899 459.0
BYD3_k127_3349304_5 Belongs to the transferase hexapeptide repeat family K00674 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008666,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016749,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004565 408.0
BYD3_k127_3349304_6 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 351.0
BYD3_k127_3349304_7 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 317.0
BYD3_k127_3349304_8 Domain of unknown function (DUF4010) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001617 292.0
BYD3_k127_3349304_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009392 272.0
BYD3_k127_3450350_0 Carbamoyl-phosphate synthetase large chain domain protein K01955 - 6.3.5.5 0.0 1371.0
BYD3_k127_3450350_1 TIGRFAM Carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 374.0
BYD3_k127_3497593_0 Acetyl-coenzyme A synthetase N-terminus K01895 - 6.2.1.1 1.506e-286 900.0
BYD3_k127_3497593_1 alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 415.0
BYD3_k127_3497593_2 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 344.0
BYD3_k127_3497593_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002224 265.0
BYD3_k127_3497593_4 serine-type D-Ala-D-Ala carboxypeptidase activity K07259 - 3.4.16.4 0.0000000003495 62.0
BYD3_k127_352073_0 MacB-like periplasmic core domain - - - 6.251e-222 736.0
BYD3_k127_352073_1 Protein of unknown function (DUF1800) - - - 1.219e-197 636.0
BYD3_k127_352073_10 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004389 319.0
BYD3_k127_352073_11 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 308.0
BYD3_k127_352073_12 Belongs to the DapA family K01714,K22397 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005975,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0019520,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046395,GO:0047440,GO:0071704,GO:0072329,GO:1901575 4.1.2.28,4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000005057 244.0
BYD3_k127_352073_13 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000001756 229.0
BYD3_k127_352073_14 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000001222 247.0
BYD3_k127_352073_15 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K01870 - 6.1.1.5 0.0000000000000000000000000000000000000000000000000000000000003799 219.0
BYD3_k127_352073_16 Mechanosensitive ion channel K05802 - - 0.000000000000000000000000000000000000000000000000000000000001634 220.0
BYD3_k127_352073_17 Nad-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000003751 212.0
BYD3_k127_352073_18 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.0000000000000000000000000000000000000000000000000000001062 206.0
BYD3_k127_352073_19 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000001898 197.0
BYD3_k127_352073_2 PQQ-like domain K05889 - 1.1.2.6 7.036e-196 630.0
BYD3_k127_352073_20 Maleate cis-trans isomerase - - - 0.000000000000000000000000000000000000000000000000001462 192.0
BYD3_k127_352073_21 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000000000000001215 182.0
BYD3_k127_352073_22 - - - - 0.000000000000000000000000000000003432 141.0
BYD3_k127_352073_23 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000000000000007097 102.0
BYD3_k127_352073_24 TIGRFAM TonB family protein K03832 - - 0.00000000000002457 84.0
BYD3_k127_352073_25 - - - - 0.00000000000143 78.0
BYD3_k127_352073_3 efflux transmembrane transporter activity - - - 2.663e-194 637.0
BYD3_k127_352073_4 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 486.0
BYD3_k127_352073_5 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 512.0
BYD3_k127_352073_6 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 432.0
BYD3_k127_352073_7 aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 356.0
BYD3_k127_352073_8 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 351.0
BYD3_k127_352073_9 CHAT domain K08884 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 337.0
BYD3_k127_3588862_0 DNA topological change K03168 - 5.99.1.2 2.957e-233 749.0
BYD3_k127_3588862_1 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 503.0
BYD3_k127_3588862_10 PD-(D/E)XK nuclease superfamily - - - 0.000000001448 60.0
BYD3_k127_3588862_2 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 495.0
BYD3_k127_3588862_3 belongs to the thioredoxin family K05838 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 437.0
BYD3_k127_3588862_4 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 402.0
BYD3_k127_3588862_5 ankyrin repeat K15503 - - 0.00000000000000000000000000000000000000000000000000000000000000001546 248.0
BYD3_k127_3588862_6 ankyrin repeat K15503 - - 0.0000000000000000000000000000000000000000000000109 197.0
BYD3_k127_3588862_7 TonB-dependent receptor - - - 0.00000000000000000000000000000000000008557 164.0
BYD3_k127_3588862_8 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000008235 91.0
BYD3_k127_3588862_9 oxidoreductase activity - - - 0.0000000000001813 84.0
BYD3_k127_3595512_0 benzoyl-CoA oxygenase K15512 - 1.14.13.208 3.483e-237 741.0
BYD3_k127_3595512_1 enoyl-coa hydratase carnithine racemase K15513 - 4.1.2.44 6.485e-226 713.0
BYD3_k127_3595512_10 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000001298 124.0
BYD3_k127_3595512_11 - - - - 0.00000000000000000005902 100.0
BYD3_k127_3595512_12 SnoaL-like polyketide cyclase - - - 0.0000000000000000001011 94.0
BYD3_k127_3595512_13 - - - - 0.00000000000000006417 81.0
BYD3_k127_3595512_14 Periplasmic or secreted lipoprotein - - - 0.0000000000000006455 87.0
BYD3_k127_3595512_15 Lysine-specific metallo-endopeptidase - - - 0.0001304 51.0
BYD3_k127_3595512_16 HD domain - - - 0.0007951 50.0
BYD3_k127_3595512_2 AMP-binding enzyme C-terminal domain K08295 - 6.2.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 583.0
BYD3_k127_3595512_3 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 510.0
BYD3_k127_3595512_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 322.0
BYD3_k127_3595512_5 ubiE/COQ5 methyltransferase family K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001169 288.0
BYD3_k127_3595512_6 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000001926 218.0
BYD3_k127_3595512_7 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000004454 224.0
BYD3_k127_3595512_8 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000005037 212.0
BYD3_k127_3595512_9 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000007866 151.0
BYD3_k127_3607510_0 PQQ-like domain K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004647 467.0
BYD3_k127_3607510_1 chaperone-mediated protein complex assembly - - - 0.0000000434 62.0
BYD3_k127_3629514_0 COG2939 Carboxypeptidase C (cathepsin A) - - - 0.000000000000000007265 86.0
BYD3_k127_3652879_0 alginic acid biosynthetic process K01729 - 4.2.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004157 541.0
BYD3_k127_3652879_1 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001121 249.0
BYD3_k127_3652879_2 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000000000001374 173.0
BYD3_k127_3652879_3 carboxymuconolactone decarboxylase K01607 - 4.1.1.44 0.00000000000001795 85.0
BYD3_k127_3652879_4 decarboxylase K01607 - 4.1.1.44 0.0000000001669 73.0
BYD3_k127_3652879_5 Alpha-L-arabinofuranosidase B, catalytic - - - 0.0000002805 57.0
BYD3_k127_3652879_6 peptidase K01181 - 3.2.1.8 0.00007774 45.0
BYD3_k127_3680302_0 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625 593.0
BYD3_k127_3680302_1 protein histidine kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002218 286.0
BYD3_k127_3680302_2 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000002965 241.0
BYD3_k127_3680302_3 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000001167 185.0
BYD3_k127_3680302_4 - - - - 0.000000000000000000000000009422 118.0
BYD3_k127_3703437_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003543 603.0
BYD3_k127_3703437_1 ECF sigma factor - - - 0.000000000000000000001757 96.0
BYD3_k127_3730556_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 468.0
BYD3_k127_3730556_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009378 443.0
BYD3_k127_3730556_10 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000001392 234.0
BYD3_k127_3730556_11 LytB protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000003736 239.0
BYD3_k127_3730556_12 D,D-heptose 1,7-bisphosphate phosphatase K02841,K02843,K02849,K03271,K03272,K03273 - 2.7.1.167,2.7.7.70,3.1.3.82,3.1.3.83,5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000781 223.0
BYD3_k127_3730556_13 Lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000006461 206.0
BYD3_k127_3730556_14 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000000001105 190.0
BYD3_k127_3730556_15 Glycosyltransferase family 9 (heptosyltransferase) K02527,K02841,K02843,K12982 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000014 195.0
BYD3_k127_3730556_16 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000311 188.0
BYD3_k127_3730556_17 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000002768 170.0
BYD3_k127_3730556_18 - - - - 0.00000000000000000000000000000000000006843 151.0
BYD3_k127_3730556_19 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000000000000000002213 146.0
BYD3_k127_3730556_2 WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 455.0
BYD3_k127_3730556_20 Putative adhesin - - - 0.000000000000000000000000000003205 132.0
BYD3_k127_3730556_22 methyltransferase activity - - - 0.00000000000000000002963 97.0
BYD3_k127_3730556_23 - - - - 0.0000000000000001366 85.0
BYD3_k127_3730556_25 Patatin-like phospholipase K07001 - - 0.000000000002534 68.0
BYD3_k127_3730556_27 PFAM Preprotein translocase SecG subunit K03075 - - 0.00000001374 62.0
BYD3_k127_3730556_28 - - - - 0.00000001708 60.0
BYD3_k127_3730556_3 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 453.0
BYD3_k127_3730556_30 PFAM Phosphate-selective porin O K07221 - - 0.0000008435 61.0
BYD3_k127_3730556_31 Cna protein B-type domain - - - 0.000001075 57.0
BYD3_k127_3730556_32 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.0000352 53.0
BYD3_k127_3730556_4 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 411.0
BYD3_k127_3730556_5 PFAM CBS domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 381.0
BYD3_k127_3730556_6 metal-dependent membrane protease K07052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009334 345.0
BYD3_k127_3730556_7 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000974 323.0
BYD3_k127_3730556_8 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002161 288.0
BYD3_k127_3730556_9 Bifunctional protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002457 261.0
BYD3_k127_3831336_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 5.519e-258 804.0
BYD3_k127_3831336_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 535.0
BYD3_k127_3831336_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009712 451.0
BYD3_k127_3831336_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006834 248.0
BYD3_k127_3831336_4 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000000000003954 119.0
BYD3_k127_3831336_5 TIGRFAM VWFA-related Acidobacterial domain - - - 0.00000000000000000000000004764 119.0
BYD3_k127_3831336_6 TIGRFAM TonB family protein K03832 - - 0.00000000000000000000000007224 118.0
BYD3_k127_3831336_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000001051 72.0
BYD3_k127_3831336_8 Heat induced stress protein YflT - - - 0.000000000006948 73.0
BYD3_k127_3831336_9 - - - - 0.0000003119 59.0
BYD3_k127_3849451_0 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008623 440.0
BYD3_k127_3849451_1 Putative esterase K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000597 221.0
BYD3_k127_3849451_2 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000003009 214.0
BYD3_k127_3849451_3 Glyoxalase-like domain K08234 - - 0.00000000000000000000000000000000000000000000000000001197 192.0
BYD3_k127_3849451_4 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000001794 186.0
BYD3_k127_3849451_5 phospholipase Carboxylesterase - - - 0.000000000000000000000000000000000000000002859 168.0
BYD3_k127_3849451_6 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000003031 142.0
BYD3_k127_3904524_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1370.0
BYD3_k127_3904524_10 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 475.0
BYD3_k127_3904524_11 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 456.0
BYD3_k127_3904524_12 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 457.0
BYD3_k127_3904524_13 Voltage-dependent anion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003981 442.0
BYD3_k127_3904524_14 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007478 427.0
BYD3_k127_3904524_15 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000972 364.0
BYD3_k127_3904524_16 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 379.0
BYD3_k127_3904524_17 Methyltransferase, chemotaxis proteins K00575,K13486 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 316.0
BYD3_k127_3904524_18 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 297.0
BYD3_k127_3904524_19 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001725 286.0
BYD3_k127_3904524_2 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 1.249e-242 769.0
BYD3_k127_3904524_20 PFAM phospholipase Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006119 287.0
BYD3_k127_3904524_21 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000008668 246.0
BYD3_k127_3904524_22 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004693 244.0
BYD3_k127_3904524_23 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000008366 244.0
BYD3_k127_3904524_24 Flavodoxin-like fold - - - 0.000000000000000000000000000000000000000000000000000000000000000001493 232.0
BYD3_k127_3904524_25 gluconolactonase activity K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000001035 239.0
BYD3_k127_3904524_26 CheC inhibitor of MCP methylation K03410 - - 0.000000000000000000000000000000000000000000000000000000000000001835 224.0
BYD3_k127_3904524_27 - - - - 0.00000000000000000000000000000000000000000000000000000000000005974 218.0
BYD3_k127_3904524_28 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000009886 217.0
BYD3_k127_3904524_29 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000007629 211.0
BYD3_k127_3904524_3 PBS lyase HEAT-like repeat - - - 5.158e-228 737.0
BYD3_k127_3904524_30 Lytic polysaccharide mono-oxygenase, cellulose-degrading - - - 0.00000000000000000000000000000000000000000000000000000016 201.0
BYD3_k127_3904524_31 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000008549 217.0
BYD3_k127_3904524_32 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000003005 188.0
BYD3_k127_3904524_33 Curli production assembly/transport component CsgG - - - 0.0000000000000000000000000000000000000000000000002222 195.0
BYD3_k127_3904524_34 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000003162 191.0
BYD3_k127_3904524_35 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000000004526 173.0
BYD3_k127_3904524_36 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000004177 147.0
BYD3_k127_3904524_37 Alpha/beta hydrolase of unknown function (DUF900) - - - 0.00000000000000000000000000000000000004447 157.0
BYD3_k127_3904524_38 PFAM Transglycosylase SLT domain K08309 - - 0.000000000000000000000000000000000002206 149.0
BYD3_k127_3904524_39 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000001859 152.0
BYD3_k127_3904524_4 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009724 603.0
BYD3_k127_3904524_40 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000006322 152.0
BYD3_k127_3904524_41 Response regulator receiver domain K03413 - - 0.0000000000000000000000000000000001121 138.0
BYD3_k127_3904524_42 - - - - 0.000000000000000000000000000000004944 136.0
BYD3_k127_3904524_43 TIR domain - - - 0.000000000000000000000000000007256 131.0
BYD3_k127_3904524_44 - - - - 0.00000000000000000000000002608 122.0
BYD3_k127_3904524_45 - - - - 0.000000000000000000000007967 114.0
BYD3_k127_3904524_46 RHS Repeat - - - 0.000000000000000000000009527 115.0
BYD3_k127_3904524_47 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000002216 108.0
BYD3_k127_3904524_48 - - - - 0.00000000000000000002115 101.0
BYD3_k127_3904524_49 - - - - 0.0000000000000000009054 97.0
BYD3_k127_3904524_5 all-trans-retinol 13,14-reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 574.0
BYD3_k127_3904524_50 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000006942 92.0
BYD3_k127_3904524_51 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000004211 91.0
BYD3_k127_3904524_52 YtkA-like - - - 0.000000000329 70.0
BYD3_k127_3904524_53 Histidine kinase - - - 0.000000007254 68.0
BYD3_k127_3904524_54 Zinc-binding dehydrogenase K00121 - 1.1.1.1,1.1.1.284 0.000001436 56.0
BYD3_k127_3904524_55 Belongs to the ParB family K03497 - - 0.000001449 61.0
BYD3_k127_3904524_56 Putative zinc-finger - - - 0.000005226 55.0
BYD3_k127_3904524_6 PFAM Glyoxalase bleomycin resistance protein dioxygenase K15975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007089 543.0
BYD3_k127_3904524_7 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 541.0
BYD3_k127_3904524_8 nitrite transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 515.0
BYD3_k127_3904524_9 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 480.0
BYD3_k127_3939286_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 5.293e-263 819.0
BYD3_k127_3939286_1 DNA polymerase X K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 564.0
BYD3_k127_3939286_10 PFAM Formiminotransferase K00603 - 2.1.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 332.0
BYD3_k127_3939286_11 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 326.0
BYD3_k127_3939286_12 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 320.0
BYD3_k127_3939286_13 Belongs to the CinA family K03742 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 328.0
BYD3_k127_3939286_14 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 320.0
BYD3_k127_3939286_15 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 307.0
BYD3_k127_3939286_16 Type ii and iii secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 312.0
BYD3_k127_3939286_17 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 292.0
BYD3_k127_3939286_18 GHMP kinases C terminal K07031 - 2.7.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 291.0
BYD3_k127_3939286_19 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003981 289.0
BYD3_k127_3939286_2 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 553.0
BYD3_k127_3939286_20 DNA polymerase X family K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004694 279.0
BYD3_k127_3939286_21 aldo-keto reductase (NADP) activity K05275 - 1.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000001907 250.0
BYD3_k127_3939286_22 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000008623 216.0
BYD3_k127_3939286_23 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000745 192.0
BYD3_k127_3939286_24 LD-carboxypeptidase K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000004753 201.0
BYD3_k127_3939286_25 - - - - 0.00000000000000000000000000000000000000000000002632 181.0
BYD3_k127_3939286_26 Lumazine binding domain K00793 GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 0.00000000000000000000000000000000000000006781 158.0
BYD3_k127_3939286_27 Ferredoxin - - - 0.00000000000000000000000000000000000001597 157.0
BYD3_k127_3939286_28 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000003397 146.0
BYD3_k127_3939286_29 PFAM RNA polymerase sigma factor 70, region 4 type 2 K03088 - - 0.0000000000000000000000000000000000002999 147.0
BYD3_k127_3939286_3 Two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008395 525.0
BYD3_k127_3939286_30 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.000000000000000000000000000000000000337 144.0
BYD3_k127_3939286_31 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000009987 142.0
BYD3_k127_3939286_32 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000005408 149.0
BYD3_k127_3939286_33 - - - - 0.000000000000000000000000000000001054 142.0
BYD3_k127_3939286_34 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000001269 139.0
BYD3_k127_3939286_35 Phage integrase family - - - 0.00000000000000000000000000000001024 143.0
BYD3_k127_3939286_36 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000003447 135.0
BYD3_k127_3939286_37 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0008150,GO:0040007 - 0.0000000000000000000000000000003122 132.0
BYD3_k127_3939286_38 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000005353 130.0
BYD3_k127_3939286_39 - - - - 0.00000000000000000000000000003564 128.0
BYD3_k127_3939286_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 460.0
BYD3_k127_3939286_40 Transglycosylase associated protein - - - 0.000000000000000000000000000753 114.0
BYD3_k127_3939286_41 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000003905 121.0
BYD3_k127_3939286_42 - - - - 0.00000000000000000000000004965 117.0
BYD3_k127_3939286_43 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000374 110.0
BYD3_k127_3939286_44 ECF sigma factor K03088 - - 0.00000000000000000009916 96.0
BYD3_k127_3939286_45 HEAT repeats - - - 0.0000000000000000001344 100.0
BYD3_k127_3939286_46 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000003733 91.0
BYD3_k127_3939286_47 Belongs to the UPF0109 family K06960 - - 0.0000000000000005609 80.0
BYD3_k127_3939286_48 Tetratricopeptide repeats - - - 0.0000000000000007157 91.0
BYD3_k127_3939286_49 Bacterial regulatory protein, Fis family - - - 0.000000000000004932 78.0
BYD3_k127_3939286_5 Belongs to the MurCDEF family K02558 - 6.3.2.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 450.0
BYD3_k127_3939286_51 Helix-turn-helix domain K15539 - - 0.0000000000004221 74.0
BYD3_k127_3939286_52 - - - - 0.000000001106 62.0
BYD3_k127_3939286_53 RDD family - - - 0.0000001012 64.0
BYD3_k127_3939286_55 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0001222 46.0
BYD3_k127_3939286_6 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 460.0
BYD3_k127_3939286_7 SAICAR synthetase K01923,K13713 - 6.3.2.6,6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 385.0
BYD3_k127_3939286_8 PFAM Allophanate hydrolase subunit 2 K06350 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006458 392.0
BYD3_k127_3939286_9 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 346.0
BYD3_k127_3957178_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.000000000000000000000000000000000000000000000000000000000061 223.0
BYD3_k127_3959590_0 PFAM carboxyl transferase K01969,K15052 - 2.1.3.15,6.4.1.3,6.4.1.4 6.032e-255 796.0
BYD3_k127_3959590_1 leukotriene A-4 hydrolase - - - 2.369e-229 727.0
BYD3_k127_3959590_10 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 456.0
BYD3_k127_3959590_11 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 452.0
BYD3_k127_3959590_12 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 457.0
BYD3_k127_3959590_13 cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 416.0
BYD3_k127_3959590_14 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 394.0
BYD3_k127_3959590_15 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008355 398.0
BYD3_k127_3959590_16 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 400.0
BYD3_k127_3959590_17 Pfam Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007285 349.0
BYD3_k127_3959590_18 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 369.0
BYD3_k127_3959590_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 332.0
BYD3_k127_3959590_2 PFAM Peptidase M1, membrane alanine aminopeptidase K01256,K08776 - 3.4.11.2 1.573e-225 727.0
BYD3_k127_3959590_20 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 344.0
BYD3_k127_3959590_21 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 340.0
BYD3_k127_3959590_22 RES - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 292.0
BYD3_k127_3959590_23 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000361 289.0
BYD3_k127_3959590_24 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009133 269.0
BYD3_k127_3959590_25 Met-10+ like-protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000156 270.0
BYD3_k127_3959590_26 Ferritin-like domain K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000009689 233.0
BYD3_k127_3959590_27 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000004823 243.0
BYD3_k127_3959590_28 lipolytic protein G-D-S-L family K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.0000000000000000000000000000000000000000000000000000149 197.0
BYD3_k127_3959590_29 Helix-hairpin-helix domain K04477 - - 0.00000000000000000000000000000000000000000000000000241 197.0
BYD3_k127_3959590_3 Protein of unknown function, DUF255 K06888 - - 2.759e-222 709.0
BYD3_k127_3959590_30 subunit CoxS CutS homologs K13483 - - 0.000000000000000000000000000000000000000000000000006022 188.0
BYD3_k127_3959590_31 COG2755 Lysophospholipase L1 and related esterases K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.0000000000000000000000000000000000000000000000001623 184.0
BYD3_k127_3959590_32 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.0000000000000000000000000000000000000000001976 169.0
BYD3_k127_3959590_33 - - - - 0.0000000000000000000000000000000000000000002722 171.0
BYD3_k127_3959590_34 phosphatase K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000893 162.0
BYD3_k127_3959590_35 Protein of unknown function (DUF2384) - - - 0.0000000000000000000000000000000004925 135.0
BYD3_k127_3959590_36 - - - - 0.0000000000000000000000000000006451 136.0
BYD3_k127_3959590_37 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000008855 136.0
BYD3_k127_3959590_38 - - - - 0.0000000000000000000000000006242 121.0
BYD3_k127_3959590_39 Putative esterase - - - 0.000000000000000000000000002703 126.0
BYD3_k127_3959590_4 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00256 - 1.3.99.16 2.243e-212 684.0
BYD3_k127_3959590_40 Virulence factor BrkB - - - 0.000000000000000000000000427 117.0
BYD3_k127_3959590_41 serine-type D-Ala-D-Ala carboxypeptidase activity K07259 - 3.4.16.4 0.000000000000000000000316 104.0
BYD3_k127_3959590_42 BON domain - - - 0.000000000000000009807 91.0
BYD3_k127_3959590_43 Forkhead associated domain K11894 - - 0.00000000000000001168 96.0
BYD3_k127_3959590_44 Protein of unknown function (DUF2911) - - - 0.0000000000000005387 91.0
BYD3_k127_3959590_45 Biotin carboxylase C-terminal domain K01968 - 6.4.1.4 0.0000000001235 74.0
BYD3_k127_3959590_46 - - - - 0.00000006313 62.0
BYD3_k127_3959590_47 RibD C-terminal domain K00082,K11752 - 1.1.1.193,3.5.4.26 0.0000001524 64.0
BYD3_k127_3959590_48 Transcriptional regulator PadR-like family K10947 - - 0.00000133 54.0
BYD3_k127_3959590_49 TIR domain - - - 0.00007566 55.0
BYD3_k127_3959590_5 Belongs to the enoyl-CoA hydratase isomerase family K07516 - 1.1.1.35 4.814e-203 655.0
BYD3_k127_3959590_50 YtxH-like protein - - - 0.0002575 49.0
BYD3_k127_3959590_6 PFAM AMP-dependent synthetase K12508 - 6.2.1.34 7.785e-201 646.0
BYD3_k127_3959590_7 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 580.0
BYD3_k127_3959590_8 Carbamoyl-phosphate synthetase large chain domain protein K01968 - 6.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 505.0
BYD3_k127_3959590_9 4-hydroxybenzoate 3-monooxygenase K00481 - 1.14.13.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 496.0
BYD3_k127_3968949_0 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000747 233.0
BYD3_k127_3968949_1 PQQ enzyme repeat K00114 - 1.1.2.8 0.0000000000000000004936 93.0
BYD3_k127_397904_0 Belongs to the sigma-70 factor family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 544.0
BYD3_k127_397904_1 protein-(glutamine-N5) methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 343.0
BYD3_k127_397904_10 ECF sigma factor - - - 0.0000001014 55.0
BYD3_k127_397904_11 - - - - 0.00002848 49.0
BYD3_k127_397904_13 transcriptional regulator - - - 0.0003834 46.0
BYD3_k127_397904_2 Alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004343 330.0
BYD3_k127_397904_3 YCII-related domain - - - 0.00000000000000000000000000000000000000000003742 169.0
BYD3_k127_397904_4 nuclease activity - - - 0.000000000000000000000000000000000002746 142.0
BYD3_k127_397904_5 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000004339 147.0
BYD3_k127_397904_6 Uncharacterized ACR, COG1993 K09137 - - 0.00000000000000000000000000000009755 132.0
BYD3_k127_397904_7 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.000000000000000000000000003042 115.0
BYD3_k127_397904_8 nuclease activity - - - 0.000000000000000003478 86.0
BYD3_k127_397904_9 AlkA N-terminal domain K13529 - 3.2.2.21 0.00000000239 62.0
BYD3_k127_3982050_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 298.0
BYD3_k127_3982050_1 Hydrolase - - - 0.0000000000000000000000000000000000000006915 159.0
BYD3_k127_3982050_2 DNA-templated transcription, initiation K02405 - - 0.00000000000000000000000000000000000002057 147.0
BYD3_k127_4014084_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000001388 220.0
BYD3_k127_4014084_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000004988 180.0
BYD3_k127_4014084_2 PIN domain - - - 0.0000000000000000000000000000000000003731 145.0
BYD3_k127_4014084_3 MacB-like periplasmic core domain - - - 0.0000000000000002763 88.0
BYD3_k127_4014084_4 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000582 62.0
BYD3_k127_4218791_0 Putative glucoamylase K13688 - - 0.0 2269.0
BYD3_k127_4218791_1 His Kinase A (phosphoacceptor) domain - - - 0.0 1121.0
BYD3_k127_4218791_10 Flavodoxin-like fold K00355 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003035 277.0
BYD3_k127_4218791_11 NB-ARC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007242 294.0
BYD3_k127_4218791_12 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005508 276.0
BYD3_k127_4218791_13 Protein of unknown function (DUF1538) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001167 263.0
BYD3_k127_4218791_14 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000646 231.0
BYD3_k127_4218791_15 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000002176 212.0
BYD3_k127_4218791_16 - - - - 0.0000000000000000000000000000000000000000000000001053 185.0
BYD3_k127_4218791_17 COG0589 Universal stress protein UspA and related K14055 - - 0.00000000000000000000000000000000000000000001896 175.0
BYD3_k127_4218791_18 - - - - 0.0000000000000000000000000000000000000000006431 166.0
BYD3_k127_4218791_19 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000004614 148.0
BYD3_k127_4218791_2 ATPase P-type (Transporting), HAD superfamily, subfamily IC K01535,K01537 - 3.6.3.6,3.6.3.8 0.0 1030.0
BYD3_k127_4218791_20 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000005083 148.0
BYD3_k127_4218791_21 Belongs to the P(II) protein family - - - 0.00000000000000000000000000000000008088 138.0
BYD3_k127_4218791_22 - - - - 0.0000000000000000000000000000000006043 149.0
BYD3_k127_4218791_23 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000001906 134.0
BYD3_k127_4218791_24 TIR domain - - - 0.000000000000000000009115 101.0
BYD3_k127_4218791_25 - - - - 0.00000000000005034 81.0
BYD3_k127_4218791_26 Tellurite resistance protein TerB - - - 0.0000000000001643 76.0
BYD3_k127_4218791_27 HDOD domain - - - 0.000000000002327 77.0
BYD3_k127_4218791_28 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides - - - 0.00000000001495 73.0
BYD3_k127_4218791_3 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 8.613e-284 878.0
BYD3_k127_4218791_4 WD40 repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 601.0
BYD3_k127_4218791_5 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 438.0
BYD3_k127_4218791_6 Peptidase T2, asparaginase 2 K13051 - 3.4.19.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 361.0
BYD3_k127_4218791_7 PFAM sodium calcium exchanger membrane region K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008579 332.0
BYD3_k127_4218791_8 Protein of unknown function (DUF1538) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 297.0
BYD3_k127_4218791_9 Glycosyl transferase, family 2 K21349 - 2.4.1.268 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 304.0
BYD3_k127_4242564_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 614.0
BYD3_k127_4242564_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 319.0
BYD3_k127_4242564_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003346 244.0
BYD3_k127_4242564_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000001452 209.0
BYD3_k127_4242564_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000003882 154.0
BYD3_k127_4242564_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000007056 139.0
BYD3_k127_4242564_6 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000002863 58.0
BYD3_k127_428186_0 PFAM ABC transporter - - - 3.067e-283 892.0
BYD3_k127_428186_1 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 569.0
BYD3_k127_428186_10 PFAM TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000005455 156.0
BYD3_k127_428186_11 protein import - - - 0.000000000000000000000000000000006648 145.0
BYD3_k127_428186_12 Protein of unknown function (DUF664) - - - 0.0000000000000000000000000000002304 132.0
BYD3_k127_428186_13 Carboxypeptidase regulatory-like domain - - - 0.0000000000000002642 88.0
BYD3_k127_428186_14 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.0000000000002249 84.0
BYD3_k127_428186_2 Ammonium Transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 544.0
BYD3_k127_428186_3 belongs to the thioredoxin family K03671,K05838 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009155 419.0
BYD3_k127_428186_4 ANTAR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 312.0
BYD3_k127_428186_5 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000000005939 236.0
BYD3_k127_428186_6 phospholipase Carboxylesterase - - - 0.000000000000000000000000000000000000000000000000000000000007907 231.0
BYD3_k127_428186_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000009456 221.0
BYD3_k127_428186_8 FG-GAP repeat - - - 0.0000000000000000000000000000000000000000007909 178.0
BYD3_k127_428186_9 FR47-like protein - - - 0.000000000000000000000000000000000000009791 151.0
BYD3_k127_4285622_0 KaiC K08482 - - 1.485e-197 626.0
BYD3_k127_4285622_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007591 378.0
BYD3_k127_4285622_2 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000002356 223.0
BYD3_k127_4285622_3 Single Cache domain 2 K02480 - 2.7.13.3 0.000000000000000000000000000000000000000000000008871 190.0
BYD3_k127_4285622_4 multi-organism process - - - 0.00000000007689 69.0
BYD3_k127_4285622_5 - - - - 0.0001288 50.0
BYD3_k127_4294260_0 Carboxypeptidase regulatory-like domain - - - 1.965e-239 776.0
BYD3_k127_4294260_1 oxidoreductase activity - - - 2.952e-228 727.0
BYD3_k127_4294260_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 569.0
BYD3_k127_4294260_3 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000254 241.0
BYD3_k127_4294260_4 Protein of unknown function DUF86 - - - 0.0000000000000000000007188 99.0
BYD3_k127_4294260_5 - K02172 - - 0.00000000000000005606 94.0
BYD3_k127_4330487_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000001914 63.0
BYD3_k127_4330487_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000003047 55.0
BYD3_k127_4330487_2 - - - - 0.000003416 57.0
BYD3_k127_4330487_3 domain protein K06894 - - 0.0001224 52.0
BYD3_k127_4351777_0 leucyl-tRNA aminoacylation K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 1.325e-305 958.0
BYD3_k127_4351777_1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 605.0
BYD3_k127_4351777_10 Domain of unknown function (DUF374) K09778 - - 0.00000000000000000000000000000000000000000000918 171.0
BYD3_k127_4351777_11 protein conserved in bacteria K09793 - - 0.00000000000000000000000000000000000000000004011 167.0
BYD3_k127_4351777_12 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000002689 161.0
BYD3_k127_4351777_13 PepSY-associated TM region - - - 0.00000000000000000000000000000000000000004243 165.0
BYD3_k127_4351777_14 - K02172 - - 0.0000000000000000000000000000000000000002378 161.0
BYD3_k127_4351777_15 Predicted membrane protein (DUF2306) - - - 0.00000000000000000000000000000000000009367 150.0
BYD3_k127_4351777_16 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000004035 114.0
BYD3_k127_4351777_17 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.000000000000000000000197 108.0
BYD3_k127_4351777_18 - - - - 0.000000000000005146 89.0
BYD3_k127_4351777_19 Ribosomal protein S20 K02968 - - 0.000000000003837 69.0
BYD3_k127_4351777_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 572.0
BYD3_k127_4351777_20 Lipopolysaccharide-assembly - - - 0.0000008859 61.0
BYD3_k127_4351777_21 SEC-C motif - - - 0.0006012 50.0
BYD3_k127_4351777_3 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 471.0
BYD3_k127_4351777_4 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009692 347.0
BYD3_k127_4351777_5 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005165 287.0
BYD3_k127_4351777_6 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001555 291.0
BYD3_k127_4351777_7 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004433 280.0
BYD3_k127_4351777_8 Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009425 251.0
BYD3_k127_4351777_9 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001124 265.0
BYD3_k127_43962_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1095.0
BYD3_k127_43962_1 AAA ATPase domain - - - 1.266e-267 872.0
BYD3_k127_43962_10 PFAM glycosyl transferase, family 51 K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 429.0
BYD3_k127_43962_11 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 398.0
BYD3_k127_43962_12 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 364.0
BYD3_k127_43962_13 COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide 5, 6-dimethylbenzimidazole phosphoribosyltransferase) K09883 - 6.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 353.0
BYD3_k127_43962_14 PFAM binding-protein-dependent transport systems inner membrane component K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005066 287.0
BYD3_k127_43962_15 TOBE domain K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001895 299.0
BYD3_k127_43962_16 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000002199 273.0
BYD3_k127_43962_17 Ion transport protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001245 263.0
BYD3_k127_43962_18 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000005478 256.0
BYD3_k127_43962_19 Mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002519 259.0
BYD3_k127_43962_2 DNA topological change K03168 - 5.99.1.2 2.684e-231 742.0
BYD3_k127_43962_20 Transcriptional regulator, LysR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003512 258.0
BYD3_k127_43962_21 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001741 273.0
BYD3_k127_43962_22 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000006614 233.0
BYD3_k127_43962_23 Ankyrin repeats (3 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000003664 237.0
BYD3_k127_43962_24 Bacterial extracellular solute-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000001519 223.0
BYD3_k127_43962_25 - - - - 0.000000000000000000000000000000000000000000000000000000000002503 231.0
BYD3_k127_43962_26 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000005888 214.0
BYD3_k127_43962_27 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000005851 200.0
BYD3_k127_43962_28 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - - 0.0000000000000000000000000000000000000000000000000006192 192.0
BYD3_k127_43962_29 CDP-alcohol phosphatidyltransferase - - - 0.000000000000000000000000000000000000000000000000002938 196.0
BYD3_k127_43962_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 GO:0003674,GO:0003824,GO:0003861,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009316,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.2.1.33,4.2.1.35 2.544e-211 670.0
BYD3_k127_43962_30 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000002899 181.0
BYD3_k127_43962_31 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000000000003363 177.0
BYD3_k127_43962_32 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.00000000000000000000000000000000000000000004625 165.0
BYD3_k127_43962_33 Protein of unknown function (DUF3738) - - - 0.00000000000000000000000000000000001206 147.0
BYD3_k127_43962_34 TOBE domain - - - 0.000000000000000000000000000000006967 132.0
BYD3_k127_43962_35 Amidohydrolase family - - - 0.00000000000000000000000000000003738 140.0
BYD3_k127_43962_36 COG4635 Flavodoxin K00230 - 1.3.5.3 0.00000000000000000000000000000003751 135.0
BYD3_k127_43962_37 - - - - 0.0000000000000000000000000000001292 135.0
BYD3_k127_43962_38 N,N-dimethylaniline monooxygenase activity K07222 - - 0.0000000000000000000000001293 111.0
BYD3_k127_43962_39 - - - - 0.0000000000000000000001925 108.0
BYD3_k127_43962_4 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000839 601.0
BYD3_k127_43962_40 - - - - 0.000000000000000000001525 109.0
BYD3_k127_43962_42 Domain of unknown function (DUF4136) - - - 0.000000000000000000193 94.0
BYD3_k127_43962_43 - - - - 0.0000000000000000001969 101.0
BYD3_k127_43962_44 - K22014 - - 0.000000000000007866 78.0
BYD3_k127_43962_45 - - - - 0.00003329 51.0
BYD3_k127_43962_46 - - - - 0.00008133 54.0
BYD3_k127_43962_47 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.0005321 53.0
BYD3_k127_43962_48 Transglycosylase SLT domain K08307 - - 0.0006119 52.0
BYD3_k127_43962_5 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 572.0
BYD3_k127_43962_6 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004012 500.0
BYD3_k127_43962_7 ATPase associated with various cellular activities, AAA_5 K09882 - 6.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 486.0
BYD3_k127_43962_8 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 458.0
BYD3_k127_43962_9 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 447.0
BYD3_k127_4414068_0 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000002934 170.0
BYD3_k127_4414068_1 DNA topological change - - - 0.00000000000000001957 84.0
BYD3_k127_4414068_2 Metallo-beta-lactamase superfamily - - - 0.00000000008125 71.0
BYD3_k127_4414068_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000005471 52.0
BYD3_k127_4414068_5 general secretion pathway protein - - - 0.00001077 47.0
BYD3_k127_4414068_6 long-chain fatty acid transporting porin activity - - - 0.00003329 51.0
BYD3_k127_4554461_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07239 - - 0.0 1157.0
BYD3_k127_4554461_1 1,4-alpha-glucan branching enzyme activity K00700,K01236 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0071704,GO:1901576 2.4.1.18,3.2.1.141 6.738e-308 959.0
BYD3_k127_4554461_10 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009971 354.0
BYD3_k127_4554461_11 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009996 320.0
BYD3_k127_4554461_12 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 GO:0003674,GO:0005215,GO:0005451,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015491,GO:0015672,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0035725,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0098655,GO:0098660,GO:0098662,GO:0099516,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 308.0
BYD3_k127_4554461_13 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 313.0
BYD3_k127_4554461_14 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 289.0
BYD3_k127_4554461_15 amino acid-binding ACT domain protein K04518 - 4.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005534 285.0
BYD3_k127_4554461_16 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000566 281.0
BYD3_k127_4554461_17 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000002411 263.0
BYD3_k127_4554461_18 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001165 263.0
BYD3_k127_4554461_19 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001045 245.0
BYD3_k127_4554461_2 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 2.126e-287 910.0
BYD3_k127_4554461_20 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000255 256.0
BYD3_k127_4554461_21 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000005104 229.0
BYD3_k127_4554461_22 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000006792 239.0
BYD3_k127_4554461_23 SelR domain K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000004261 222.0
BYD3_k127_4554461_24 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000002034 216.0
BYD3_k127_4554461_25 - - - - 0.00000000000000000000000000000000000000000000000000000008035 199.0
BYD3_k127_4554461_26 pfkB family carbohydrate kinase K18478 - 2.7.1.184 0.000000000000000000000000000000000000000000000000000001102 202.0
BYD3_k127_4554461_27 SpoU rRNA Methylase family - - - 0.000000000000000000000000000000000000000000000000000008508 216.0
BYD3_k127_4554461_28 TraB family K09973 - - 0.00000000000000000000000000000000000000000000000000001607 199.0
BYD3_k127_4554461_29 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000001285 179.0
BYD3_k127_4554461_3 Dehydrogenase K00114 - 1.1.2.8 9.073e-210 688.0
BYD3_k127_4554461_30 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000000000008837 186.0
BYD3_k127_4554461_31 G/U mismatch-specific uracil-DNA glycosylase activity K01934,K03649 GO:0000700,GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008263,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.28,6.3.3.2 0.0000000000000000000000000000000000000000000001395 174.0
BYD3_k127_4554461_32 DNA-templated transcription, initiation K02405 - - 0.0000000000000000000000000000000000000000000001489 173.0
BYD3_k127_4554461_33 - - - - 0.000000000000000000000000000000000000000003778 165.0
BYD3_k127_4554461_34 Protein of unknown function (DUF998) - - - 0.000000000000000000000000000000000000001435 156.0
BYD3_k127_4554461_35 EVE domain - - - 0.00000000000000000000000000000000000001139 150.0
BYD3_k127_4554461_36 ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component - - - 0.0000000000000000000000000000000000003916 147.0
BYD3_k127_4554461_37 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000007996 142.0
BYD3_k127_4554461_38 lactoylglutathione lyase activity K03088 - - 0.00000000000000000000000000000000001801 155.0
BYD3_k127_4554461_39 - - - - 0.0000000000000000000000000000000007924 141.0
BYD3_k127_4554461_4 Dehydrogenase K00114 - 1.1.2.8 2.515e-198 634.0
BYD3_k127_4554461_40 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000001056 106.0
BYD3_k127_4554461_41 - - - - 0.0000000000000000000007621 99.0
BYD3_k127_4554461_43 Outer membrane efflux protein K15725 - - 0.000000000000000681 90.0
BYD3_k127_4554461_44 CAAX protease self-immunity K07052 - - 0.00000000001192 70.0
BYD3_k127_4554461_45 - - - - 0.0000000001109 67.0
BYD3_k127_4554461_47 Domain of unknown function (DUF1330) - - - 0.00000008392 61.0
BYD3_k127_4554461_48 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000009125 57.0
BYD3_k127_4554461_49 TPR repeat-containing protein - - - 0.0009559 51.0
BYD3_k127_4554461_5 Nucleoside H+ symporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 490.0
BYD3_k127_4554461_6 Multicopper oxidase K22348 - 1.16.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 415.0
BYD3_k127_4554461_7 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 396.0
BYD3_k127_4554461_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009976 380.0
BYD3_k127_4554461_9 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005812 356.0
BYD3_k127_4563064_0 - - - - 0.0000000000000000000000000000000000000000000000000005531 198.0
BYD3_k127_4563064_1 - - - - 0.000000000000000000000000000000000000000000001158 169.0
BYD3_k127_4563064_2 enterobactin catabolic process K07214,K09689 - 3.6.3.38 0.0000000000000000000000000000000000000000002126 160.0
BYD3_k127_4563064_3 Carboxypeptidase regulatory-like domain - - - 0.000141 54.0
BYD3_k127_4584757_0 Sigma-70 region 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005833 556.0
BYD3_k127_4584757_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 377.0
BYD3_k127_4584757_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 372.0
BYD3_k127_4584757_3 Putative cyclase K07130 GO:0003674,GO:0003824,GO:0004061,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 331.0
BYD3_k127_4584757_4 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.00000000000000000000000000000000000000000002145 163.0
BYD3_k127_4584757_5 YCII-related domain - - - 0.000000000000000000000000000000000000000001451 159.0
BYD3_k127_4606462_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 452.0
BYD3_k127_4606462_1 pfam abc K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002771 248.0
BYD3_k127_4606462_10 BON domain - - - 0.000007753 57.0
BYD3_k127_4606462_11 MlaD protein K02067 - - 0.0002801 46.0
BYD3_k127_4606462_12 - - - - 0.0007342 50.0
BYD3_k127_4606462_2 Belongs to the MlaE permease family K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000007326 235.0
BYD3_k127_4606462_3 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000001259 168.0
BYD3_k127_4606462_4 DnaJ molecular chaperone homology domain - - - 0.00000000000000000000000000000000000005746 152.0
BYD3_k127_4606462_5 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000473 139.0
BYD3_k127_4606462_6 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000000000005871 137.0
BYD3_k127_4606462_7 peptidyl-tyrosine sulfation - - - 0.000000000000000000000004013 117.0
BYD3_k127_4606462_8 - - - - 0.00000000003603 70.0
BYD3_k127_4606462_9 - - - - 0.0000004766 63.0
BYD3_k127_4622978_0 HELICc2 K03722 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 534.0
BYD3_k127_4622978_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000007648 214.0
BYD3_k127_4622978_2 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000000000000542 174.0
BYD3_k127_4622978_3 5TM C-terminal transporter carbon starvation CstA K06200 - - 0.00000000000000000005235 92.0
BYD3_k127_4622978_4 DivIVA protein K04074 - - 0.00000000000000001967 91.0
BYD3_k127_4622978_5 peptidyl-tyrosine sulfation - - - 0.00000000000000004583 93.0
BYD3_k127_4622978_6 oxidoreductase activity - - - 0.0000001484 64.0
BYD3_k127_46691_0 Monomeric isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1065.0
BYD3_k127_46691_1 antibiotic biosynthetic process K01434 - 3.5.1.11 1.779e-216 698.0
BYD3_k127_46691_10 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 414.0
BYD3_k127_46691_11 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 414.0
BYD3_k127_46691_12 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 394.0
BYD3_k127_46691_13 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 344.0
BYD3_k127_46691_14 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 308.0
BYD3_k127_46691_15 ATPase activity K01990,K13926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 291.0
BYD3_k127_46691_16 transport, permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003169 301.0
BYD3_k127_46691_17 transport, permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007007 287.0
BYD3_k127_46691_18 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002712 265.0
BYD3_k127_46691_19 PFAM Asparaginase K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000001057 231.0
BYD3_k127_46691_2 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009236 624.0
BYD3_k127_46691_20 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000002166 239.0
BYD3_k127_46691_21 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000002548 218.0
BYD3_k127_46691_22 deacetylase K01463 - - 0.00000000000000000000000000000000000000000000000000000503 215.0
BYD3_k127_46691_23 HlyD family secretion protein K01993 - - 0.00000000000000000000000000000000000000000000000000009411 205.0
BYD3_k127_46691_24 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000000000532 177.0
BYD3_k127_46691_25 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000519 158.0
BYD3_k127_46691_26 - - - - 0.0000000000000000000000000000000002428 139.0
BYD3_k127_46691_27 outer membrane efflux protein - - - 0.0000000000000000000000000000001539 140.0
BYD3_k127_46691_28 - - - - 0.0000000000000000000000000005932 118.0
BYD3_k127_46691_29 DinB family - - - 0.00000000000000000000002492 112.0
BYD3_k127_46691_3 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 610.0
BYD3_k127_46691_30 Lysin motif - - - 0.0000000000000000004295 93.0
BYD3_k127_46691_31 - - - - 0.0000000000000000008333 93.0
BYD3_k127_46691_32 Bacterial regulatory proteins, tetR family - - - 0.00000000000000001026 96.0
BYD3_k127_46691_33 AAA ATPase domain - - - 0.00000000000000006501 94.0
BYD3_k127_46691_34 antisigma factor binding - - - 0.0000000000000007399 86.0
BYD3_k127_46691_35 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.000000000000002953 85.0
BYD3_k127_46691_4 Peptidase, M61 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 577.0
BYD3_k127_46691_5 M61 glycyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008648 568.0
BYD3_k127_46691_6 Peptidase, M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003916 560.0
BYD3_k127_46691_7 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 476.0
BYD3_k127_46691_8 FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 424.0
BYD3_k127_46691_9 PFAM Glycosyl transferase, group 1 K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 421.0
BYD3_k127_4680186_0 AlkA N-terminal domain K13529 - 3.2.2.21 1.22e-196 628.0
BYD3_k127_4680186_1 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 307.0
BYD3_k127_4680186_2 monooxygenase, FAD-binding - - - 0.0000000000000000001618 90.0
BYD3_k127_4683397_0 Urocanase C-terminal domain K01712 - 4.2.1.49 1.76e-258 807.0
BYD3_k127_4683397_1 Histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 496.0
BYD3_k127_4683397_10 AAA ATPase domain - - - 0.0000000000001164 83.0
BYD3_k127_4683397_11 Non-ribosomal peptide synthetase modules and related proteins - - - 0.00000000006402 75.0
BYD3_k127_4683397_2 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008284,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0042127,GO:0043418,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0048518,GO:0048522,GO:0050667,GO:0050789,GO:0050794,GO:0065007,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 4.4.1.1,4.4.1.2,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 464.0
BYD3_k127_4683397_3 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000978 464.0
BYD3_k127_4683397_4 Predicted methyltransferase regulatory domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 411.0
BYD3_k127_4683397_5 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 324.0
BYD3_k127_4683397_6 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007355 304.0
BYD3_k127_4683397_7 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000000000009211 204.0
BYD3_k127_4683397_8 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000001245 216.0
BYD3_k127_4683397_9 Bacterial-like globin K06886 - - 0.0000000000000000000000000000000000000000000148 178.0
BYD3_k127_4695929_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1241.0
BYD3_k127_4695929_1 metallocarboxypeptidase activity K14054 - - 3.439e-315 994.0
BYD3_k127_4695929_10 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 490.0
BYD3_k127_4695929_11 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 467.0
BYD3_k127_4695929_12 LOR/SDH bifunctional enzyme conserved region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006717 464.0
BYD3_k127_4695929_13 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 458.0
BYD3_k127_4695929_14 COG3540 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 423.0
BYD3_k127_4695929_15 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 417.0
BYD3_k127_4695929_16 Pyridoxal-phosphate dependent enzyme K12339,K21148 - 2.5.1.113,2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005983 408.0
BYD3_k127_4695929_17 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 419.0
BYD3_k127_4695929_18 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 394.0
BYD3_k127_4695929_19 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 385.0
BYD3_k127_4695929_2 Insulinase (Peptidase family M16) K07263 - - 1.801e-313 996.0
BYD3_k127_4695929_20 PFAM multicopper oxidase type - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 384.0
BYD3_k127_4695929_21 Deoxyhypusine synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 388.0
BYD3_k127_4695929_22 aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 379.0
BYD3_k127_4695929_23 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 384.0
BYD3_k127_4695929_24 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 346.0
BYD3_k127_4695929_25 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 345.0
BYD3_k127_4695929_26 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 335.0
BYD3_k127_4695929_27 transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 342.0
BYD3_k127_4695929_28 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 341.0
BYD3_k127_4695929_29 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 349.0
BYD3_k127_4695929_3 Angiotensin-converting enzyme K01283 - 3.4.15.1 6.62e-254 801.0
BYD3_k127_4695929_30 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 329.0
BYD3_k127_4695929_31 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 342.0
BYD3_k127_4695929_32 Di-haem oxidoreductase, putative peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 327.0
BYD3_k127_4695929_33 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 311.0
BYD3_k127_4695929_34 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 301.0
BYD3_k127_4695929_35 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005001 300.0
BYD3_k127_4695929_36 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009704 301.0
BYD3_k127_4695929_37 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004647 293.0
BYD3_k127_4695929_38 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 311.0
BYD3_k127_4695929_39 Belongs to the UPF0271 (lamB) family K07160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006398 292.0
BYD3_k127_4695929_4 heat shock protein 70 K04043,K04044 - - 1.257e-206 664.0
BYD3_k127_4695929_40 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 297.0
BYD3_k127_4695929_41 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004119 291.0
BYD3_k127_4695929_42 peptidoglycan-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000576 283.0
BYD3_k127_4695929_43 Sigma-54 factor interaction domain-containing protein K02481,K07712,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006333 287.0
BYD3_k127_4695929_44 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 GO:0003674,GO:0003824,GO:0003942,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000001782 274.0
BYD3_k127_4695929_45 PFAM Chlorite dismutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001605 267.0
BYD3_k127_4695929_46 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001165 271.0
BYD3_k127_4695929_47 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000004245 263.0
BYD3_k127_4695929_48 FtsZ-dependent cytokinesis - - - 0.00000000000000000000000000000000000000000000000000000000000000001478 239.0
BYD3_k127_4695929_49 PFAM ABC transporter K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000001603 234.0
BYD3_k127_4695929_5 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 2.157e-200 631.0
BYD3_k127_4695929_50 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.00000000000000000000000000000000000000000000000000000000000000001651 228.0
BYD3_k127_4695929_51 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000000000002743 221.0
BYD3_k127_4695929_52 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000006152 232.0
BYD3_k127_4695929_53 FeoA K03709 - - 0.0000000000000000000000000000000000000000000000000000000001901 213.0
BYD3_k127_4695929_54 Peptidase family M23 K21472 - - 0.0000000000000000000000000000000000000000000000000000000002735 210.0
BYD3_k127_4695929_55 endonuclease III K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000275 206.0
BYD3_k127_4695929_56 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000003228 200.0
BYD3_k127_4695929_57 high-affinity ferrous iron transmembrane transporter activity K07243 - - 0.0000000000000000000000000000000000000000000000000002234 200.0
BYD3_k127_4695929_58 HDOD domain K03088 - - 0.000000000000000000000000000000000000000000000000002542 190.0
BYD3_k127_4695929_59 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000006316 186.0
BYD3_k127_4695929_6 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 5.692e-197 625.0
BYD3_k127_4695929_60 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000001927 196.0
BYD3_k127_4695929_61 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000001361 179.0
BYD3_k127_4695929_62 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000004335 172.0
BYD3_k127_4695929_63 phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000000000000000000000000000000000004334 171.0
BYD3_k127_4695929_64 Phosphorylase superfamily - - - 0.0000000000000000000000000000000000000000007433 167.0
BYD3_k127_4695929_65 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000000000000000005207 164.0
BYD3_k127_4695929_66 Membrane - - - 0.0000000000000000000000000000000000000001085 168.0
BYD3_k127_4695929_67 RDD family - - - 0.00000000000000000000000000000000000007722 163.0
BYD3_k127_4695929_68 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000005345 160.0
BYD3_k127_4695929_69 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000000000000000000001041 145.0
BYD3_k127_4695929_7 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 610.0
BYD3_k127_4695929_70 proteolysis - - - 0.00000000000000000000000000000000001172 141.0
BYD3_k127_4695929_71 Transcriptional regulator - - - 0.0000000000000000000000000000000001939 138.0
BYD3_k127_4695929_72 MgtC family K07507 - - 0.000000000000000000000000000000002149 135.0
BYD3_k127_4695929_73 PFAM heat shock protein DnaJ K04082 - - 0.00000000000000000000000000000005555 136.0
BYD3_k127_4695929_74 - - - - 0.0000000000000000000000000000002653 130.0
BYD3_k127_4695929_75 Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of 2Fe2S cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system K13628 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009058,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0016530,GO:0018130,GO:0019438,GO:0019538,GO:0022607,GO:0031163,GO:0031974,GO:0033013,GO:0033014,GO:0034641,GO:0034986,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0070013,GO:0071704,GO:0071840,GO:0097428,GO:0140104,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000006947 125.0
BYD3_k127_4695929_76 PFAM Acetyltransferase (GNAT) family K03790 - 2.3.1.128 0.000000000000000000000000000002607 127.0
BYD3_k127_4695929_77 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000001543 125.0
BYD3_k127_4695929_78 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000002134 118.0
BYD3_k127_4695929_79 Chromate transporter K07240 - - 0.0000000000000000000000001689 117.0
BYD3_k127_4695929_8 ATPase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000485 559.0
BYD3_k127_4695929_80 Regulates arginine biosynthesis genes K03402 - - 0.00000000000000000000000719 109.0
BYD3_k127_4695929_81 OsmC-like protein K07397 - - 0.0000000000000000000004595 102.0
BYD3_k127_4695929_82 nitric oxide dioxygenase activity - - - 0.0000000000000000000006068 104.0
BYD3_k127_4695929_83 FeS assembly protein IscX - - - 0.000000000000000000006243 95.0
BYD3_k127_4695929_84 Chromate transporter K07240 - - 0.000000000000000000008089 99.0
BYD3_k127_4695929_85 DNA-sulfur modification-associated - - - 0.00000000000000000005093 102.0
BYD3_k127_4695929_86 Belongs to the acetyltransferase family. ArgA subfamily K00619,K14681 GO:0003674,GO:0003824,GO:0004042,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016043,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0040007,GO:0042450,GO:0042802,GO:0042803,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,4.3.2.1 0.0000000000000000001826 96.0
BYD3_k127_4695929_87 Glucokinase K00845 GO:0003674,GO:0003824,GO:0004340,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044464,GO:0046835,GO:0051156,GO:0071704,GO:1901135 2.7.1.2 0.0000000000000000005783 98.0
BYD3_k127_4695929_88 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.000000000000000004642 96.0
BYD3_k127_4695929_89 Protein of unknown function (DUF541) K09807 - - 0.000000000000000007038 93.0
BYD3_k127_4695929_9 Amino acid kinase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 530.0
BYD3_k127_4695929_91 bacterial OsmY and nodulation domain K04065 - - 0.00000000000008317 76.0
BYD3_k127_4695929_92 cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.00000000005943 69.0
BYD3_k127_4695929_93 oxidoreductase activity - - - 0.0000000001397 75.0
BYD3_k127_4695929_94 Belongs to the glycosyl hydrolase 26 family K01179,K01218 - 3.2.1.4,3.2.1.78 0.000000008719 67.0
BYD3_k127_4695929_95 - - - - 0.00000002036 64.0
BYD3_k127_4695929_96 Helix-turn-helix domain K15539 - - 0.0000007628 57.0
BYD3_k127_4695929_97 N-methylation of lysine residues in flagellin K00599 K18475 - - 0.00002201 57.0
BYD3_k127_4695929_99 Copper binding proteins, plastocyanin/azurin family - - - 0.0002093 49.0
BYD3_k127_4712570_0 (ABC) transporter K06147,K18890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 621.0
BYD3_k127_4712570_1 ABC transporter, transmembrane K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 584.0
BYD3_k127_4712570_10 3D domain - - - 0.00000000000002332 83.0
BYD3_k127_4712570_11 - - - - 0.0002182 52.0
BYD3_k127_4712570_2 Erythromycin esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 543.0
BYD3_k127_4712570_3 Amidohydrolase K14333,K20941 - 4.1.1.103,4.1.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 359.0
BYD3_k127_4712570_4 Erythromycin esterase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000001177 273.0
BYD3_k127_4712570_5 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008378 255.0
BYD3_k127_4712570_6 Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000007365 254.0
BYD3_k127_4712570_7 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000009479 226.0
BYD3_k127_4712570_8 - - - - 0.0000000000000000000000000000000000000000000000000000356 197.0
BYD3_k127_4712570_9 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000001018 134.0
BYD3_k127_47437_0 Aminomethyltransferase folate-binding domain K15066 - 2.1.1.341 1.193e-227 715.0
BYD3_k127_47437_1 Histidine kinase internal region K02478 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004744 367.0
BYD3_k127_47437_2 Two component transcriptional regulator, LytTR family K02477,K07705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001423 264.0
BYD3_k127_47437_3 Dimerisation domain of Zinc Transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007083 246.0
BYD3_k127_47437_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00337,K00338 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000003914 168.0
BYD3_k127_47437_5 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000007947 168.0
BYD3_k127_47437_6 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.000000000000782 74.0
BYD3_k127_475427_0 efflux transmembrane transporter activity - - - 2.467e-264 837.0
BYD3_k127_475427_1 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 422.0
BYD3_k127_475427_11 - - - - 0.0000000000000000009777 87.0
BYD3_k127_475427_2 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009475 422.0
BYD3_k127_475427_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004623 273.0
BYD3_k127_475427_4 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001902 254.0
BYD3_k127_475427_5 Transcriptional Regulator, AraC family - - - 0.00000000000000000000000000000000000000000000000004536 187.0
BYD3_k127_475427_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000004654 169.0
BYD3_k127_475427_7 TIR domain - - - 0.00000000000000000000000000000000000001226 161.0
BYD3_k127_475427_8 DoxX-like family - - - 0.00000000000000000000000000002247 126.0
BYD3_k127_475427_9 Belongs to the ompA family - - - 0.00000000000000000000000003217 123.0
BYD3_k127_4761935_0 Isocitrate/isopropylmalate dehydrogenase K07246 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003862,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006108,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009027,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0019752,GO:0036094,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046553,GO:0046872,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.83,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004766 505.0
BYD3_k127_4761935_1 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 384.0
BYD3_k127_4761935_10 - - - - 0.000000000000000000000000001979 114.0
BYD3_k127_4761935_11 Signal peptide protein - GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 - 0.00000000000006548 75.0
BYD3_k127_4761935_12 - - - - 0.0000000007025 64.0
BYD3_k127_4761935_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 312.0
BYD3_k127_4761935_3 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006415 289.0
BYD3_k127_4761935_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000005829 238.0
BYD3_k127_4761935_5 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.0000000000000000000000000000000000000000000000000000000001827 224.0
BYD3_k127_4761935_6 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000001325 196.0
BYD3_k127_4761935_7 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000005957 154.0
BYD3_k127_4761935_8 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000002062 141.0
BYD3_k127_4761935_9 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000002239 131.0
BYD3_k127_4765798_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1248.0
BYD3_k127_4765798_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 2.326e-317 991.0
BYD3_k127_4765798_10 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 500.0
BYD3_k127_4765798_11 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 441.0
BYD3_k127_4765798_12 ATPases associated with a variety of cellular activities K01990,K09689,K09691,K09693 - 3.6.3.38,3.6.3.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008081 427.0
BYD3_k127_4765798_13 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009485 420.0
BYD3_k127_4765798_14 PFAM aminotransferase, class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 381.0
BYD3_k127_4765798_15 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008598 372.0
BYD3_k127_4765798_16 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 367.0
BYD3_k127_4765798_17 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 365.0
BYD3_k127_4765798_18 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 353.0
BYD3_k127_4765798_19 ATP synthesis coupled electron transport K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 337.0
BYD3_k127_4765798_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.863e-302 951.0
BYD3_k127_4765798_20 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0031224,GO:0031226,GO:0032940,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051205,GO:0051234,GO:0051259,GO:0051260,GO:0051641,GO:0061024,GO:0065003,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 311.0
BYD3_k127_4765798_21 COG1192 ATPases involved in chromosome partitioning K03496 GO:0008150,GO:0022603,GO:0042173,GO:0042174,GO:0043937,GO:0043939,GO:0045595,GO:0045596,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007089 295.0
BYD3_k127_4765798_22 histidine kinase A domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000135 299.0
BYD3_k127_4765798_23 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001229 286.0
BYD3_k127_4765798_24 ABC-2 type transporter K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007217 274.0
BYD3_k127_4765798_25 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002647 270.0
BYD3_k127_4765798_26 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003834 270.0
BYD3_k127_4765798_27 aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006593 288.0
BYD3_k127_4765798_28 Cytochrome c biogenesis protein K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009762 264.0
BYD3_k127_4765798_29 Phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006435 271.0
BYD3_k127_4765798_3 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 7.229e-285 919.0
BYD3_k127_4765798_30 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001059 267.0
BYD3_k127_4765798_31 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009594 249.0
BYD3_k127_4765798_32 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000008871 237.0
BYD3_k127_4765798_33 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000001725 236.0
BYD3_k127_4765798_34 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000002774 207.0
BYD3_k127_4765798_35 response regulator K02667 - - 0.00000000000000000000000000000000000000000000000000007972 192.0
BYD3_k127_4765798_36 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000001533 179.0
BYD3_k127_4765798_37 DoxX - - - 0.00000000000000000000000000000000000000000000000483 179.0
BYD3_k127_4765798_38 CHASE3 domain - - - 0.00000000000000000000000000000000000000000001312 178.0
BYD3_k127_4765798_39 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000000004636 149.0
BYD3_k127_4765798_4 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 5.958e-253 793.0
BYD3_k127_4765798_40 Probably functions as a manganese efflux pump - - - 0.00000000000000000000000000000000000005041 163.0
BYD3_k127_4765798_41 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000007499 147.0
BYD3_k127_4765798_42 Utp--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000001079 149.0
BYD3_k127_4765798_43 AI-2E family transporter K03548 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.00000000000000000000000000000000001678 155.0
BYD3_k127_4765798_44 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.0000000000000000000000000000000002596 149.0
BYD3_k127_4765798_45 PFAM transcriptional regulator PadR family protein - - - 0.0000000000000000000000000000000008248 134.0
BYD3_k127_4765798_46 Transcription termination factor nusG - - - 0.0000000000000000000000000000006556 136.0
BYD3_k127_4765798_47 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000004659 115.0
BYD3_k127_4765798_48 Protein of unknown function with PCYCGC motif - - - 0.000000000000000000000105 104.0
BYD3_k127_4765798_49 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000006351 106.0
BYD3_k127_4765798_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.613e-240 750.0
BYD3_k127_4765798_50 oxidoreductase activity K12511 - - 0.000000000000000000002386 105.0
BYD3_k127_4765798_51 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000004999 92.0
BYD3_k127_4765798_52 PFAM Single-stranded nucleic acid binding R3H K06346 - - 0.000000000000000001063 91.0
BYD3_k127_4765798_53 peptidyl-prolyl isomerase K03769 - 5.2.1.8 0.00000000000000000605 96.0
BYD3_k127_4765798_54 TIGRFAM regulatory protein, FmdB - - - 0.0000000000000001544 83.0
BYD3_k127_4765798_55 Specifically methylates the N7 position of guanine in position 535 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000002096 84.0
BYD3_k127_4765798_56 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000004809 71.0
BYD3_k127_4765798_57 - - - - 0.00000000002096 68.0
BYD3_k127_4765798_58 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000001567 70.0
BYD3_k127_4765798_59 - - - - 0.000000001786 65.0
BYD3_k127_4765798_6 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.597e-235 743.0
BYD3_k127_4765798_60 Stress responsive A/B Barrel Domain - - - 0.0003087 50.0
BYD3_k127_4765798_7 ATP-dependent DNA helicase K03657 - 3.6.4.12 2.464e-201 651.0
BYD3_k127_4765798_8 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 623.0
BYD3_k127_4765798_9 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 496.0
BYD3_k127_4781724_0 Aminomethyltransferase folate-binding domain K15064 - - 1.739e-203 642.0
BYD3_k127_4781724_1 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 557.0
BYD3_k127_4781724_2 Uncharacterised MFS-type transporter YbfB K05548,K05819,K08195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 508.0
BYD3_k127_4781724_3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000668 69.0
BYD3_k127_4781724_4 TonB-dependent receptor - - - 0.00000001368 66.0
BYD3_k127_4781724_5 TonB-dependent receptor - - - 0.0001392 51.0
BYD3_k127_4799485_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1162.0
BYD3_k127_4799485_1 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004239 454.0
BYD3_k127_4799485_10 Outer membrane efflux protein - - - 0.00000000000001563 86.0
BYD3_k127_4799485_11 Cysteine-rich CWC - - - 0.000003361 53.0
BYD3_k127_4799485_2 extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008228 341.0
BYD3_k127_4799485_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002628 269.0
BYD3_k127_4799485_4 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.0000000000000000000000000000000000000000000000000000000000000003284 229.0
BYD3_k127_4799485_5 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000004556 206.0
BYD3_k127_4799485_6 Belongs to the peptidase S8 family K17734 - - 0.000000000000000000000000000000000000000000000000000003475 209.0
BYD3_k127_4799485_7 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000008141 193.0
BYD3_k127_4799485_8 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000001129 183.0
BYD3_k127_4799485_9 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000003905 154.0
BYD3_k127_4861438_0 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 521.0
BYD3_k127_4861438_1 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 447.0
BYD3_k127_4861438_10 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000001421 220.0
BYD3_k127_4861438_11 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000001197 211.0
BYD3_k127_4861438_12 Disulphide isomerase - - - 0.000000000000000000000000000000000000000000000001764 177.0
BYD3_k127_4861438_13 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000000000000000000002009 195.0
BYD3_k127_4861438_14 BlaR1 peptidase M56 - - - 0.0000000000000000000000000000000000000000000002447 190.0
BYD3_k127_4861438_15 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000000000000000003801 186.0
BYD3_k127_4861438_16 Penicillinase repressor - - - 0.0000000000000000000000000000000000000000001522 162.0
BYD3_k127_4861438_17 Protein of unknown function DUF45 - - - 0.0000000000000000000000000000000000001449 151.0
BYD3_k127_4861438_18 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000003708 88.0
BYD3_k127_4861438_19 efflux transmembrane transporter activity - - - 0.00000000000000001447 91.0
BYD3_k127_4861438_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009821 425.0
BYD3_k127_4861438_20 - - - - 0.00000000004876 73.0
BYD3_k127_4861438_21 Regulatory protein, FmdB family - - - 0.00000000009253 65.0
BYD3_k127_4861438_22 aminopeptidase N - - - 0.000000005709 66.0
BYD3_k127_4861438_23 histidine kinase A domain protein - - - 0.000008368 57.0
BYD3_k127_4861438_3 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 365.0
BYD3_k127_4861438_4 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000569 355.0
BYD3_k127_4861438_5 MFS/sugar transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 340.0
BYD3_k127_4861438_6 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 327.0
BYD3_k127_4861438_7 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000005958 230.0
BYD3_k127_4861438_8 Conserved domain frequently associated with peptide methionine sulfoxide reductase K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000001956 222.0
BYD3_k127_4861438_9 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000002122 224.0
BYD3_k127_4895366_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1233.0
BYD3_k127_4895366_1 amidase activity K01426 - 3.5.1.4 1.969e-255 802.0
BYD3_k127_4895366_10 Peptidase M64 N-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 482.0
BYD3_k127_4895366_11 Pfam:CPSase_L_chain K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007085 469.0
BYD3_k127_4895366_12 X-Pro dipeptidyl-peptidase (S15 family) K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007416 417.0
BYD3_k127_4895366_13 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006182 348.0
BYD3_k127_4895366_14 DNA methylase K00571 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 342.0
BYD3_k127_4895366_15 Multi-sensor signal transduction histidine kinase K07710 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 338.0
BYD3_k127_4895366_16 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 335.0
BYD3_k127_4895366_17 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006163 283.0
BYD3_k127_4895366_18 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001226 267.0
BYD3_k127_4895366_19 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000005866 239.0
BYD3_k127_4895366_2 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 1.942e-238 745.0
BYD3_k127_4895366_20 PFAM ATP-binding region, ATPase domain protein domain protein K07683 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000006416 231.0
BYD3_k127_4895366_21 surface antigen variable number - - - 0.000000000000000000000000000000000000000000000000000000000004394 237.0
BYD3_k127_4895366_22 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000005587 222.0
BYD3_k127_4895366_23 - - - - 0.0000000000000000000000000000000000000001479 160.0
BYD3_k127_4895366_24 Beta-lactamase - - - 0.00000000000000000000000000000000000001477 161.0
BYD3_k127_4895366_25 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000007997 144.0
BYD3_k127_4895366_26 Biotin-requiring enzyme - - - 0.00000000000001868 85.0
BYD3_k127_4895366_27 Fibronectin type 3 domain - - - 0.0000000000693 76.0
BYD3_k127_4895366_28 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.000000001853 70.0
BYD3_k127_4895366_29 mannosylglycerate metabolic process K05947,K07026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050897 2.4.1.217,3.1.3.70 0.000000005276 67.0
BYD3_k127_4895366_3 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 7.268e-226 712.0
BYD3_k127_4895366_30 PFAM PEGA domain - - - 0.00000003059 64.0
BYD3_k127_4895366_31 Amidohydrolase family - - - 0.0000001223 60.0
BYD3_k127_4895366_32 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.000004765 56.0
BYD3_k127_4895366_33 CAAX protease self-immunity - - - 0.0001112 53.0
BYD3_k127_4895366_4 PFAM Amidohydrolase 3 - - - 2.811e-204 653.0
BYD3_k127_4895366_5 Protein kinase domain K12132 - 2.7.11.1 6.587e-202 657.0
BYD3_k127_4895366_6 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 599.0
BYD3_k127_4895366_7 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 592.0
BYD3_k127_4895366_8 phosphorelay signal transduction system K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 527.0
BYD3_k127_4895366_9 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 502.0
BYD3_k127_4913171_0 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000000000000001794 181.0
BYD3_k127_4913171_1 Transposase DDE domain - - - 0.000000000000000000000002974 104.0
BYD3_k127_4913171_2 Protein of unknown function (DUF3738) - - - 0.000000000000002346 89.0
BYD3_k127_4917669_0 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 1.5e-323 1004.0
BYD3_k127_4917669_1 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 1.229e-239 764.0
BYD3_k127_4917669_10 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000008062 96.0
BYD3_k127_4917669_11 Penicillinase repressor - - - 0.0000000000000000009633 89.0
BYD3_k127_4917669_12 response regulator, receiver - - - 0.000000000000000007205 96.0
BYD3_k127_4917669_13 histidine kinase A domain protein - - - 0.000008726 53.0
BYD3_k127_4917669_2 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 601.0
BYD3_k127_4917669_3 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 432.0
BYD3_k127_4917669_4 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000004236 251.0
BYD3_k127_4917669_5 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000685 237.0
BYD3_k127_4917669_6 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000000000000000000000000000001194 241.0
BYD3_k127_4917669_7 regulator - - - 0.00000000000000000000000000000000000000000000000000000000001434 214.0
BYD3_k127_4917669_8 Histidine kinase - - - 0.00000000000000000000000000000000000000006523 160.0
BYD3_k127_4917669_9 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000522 118.0
BYD3_k127_5012129_0 alpha-L-arabinofuranosidase domain protein K01209 - 3.2.1.55 3.181e-256 808.0
BYD3_k127_5012129_1 Tripartite tricarboxylate transporter TctA family K07793 - - 1.088e-213 673.0
BYD3_k127_5012129_10 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005936 383.0
BYD3_k127_5012129_11 ABC-type sugar transport system periplasmic component K10439 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 387.0
BYD3_k127_5012129_12 inositol monophosphate 1-phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006795 373.0
BYD3_k127_5012129_13 Cupin 2 conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000504 247.0
BYD3_k127_5012129_14 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000005321 201.0
BYD3_k127_5012129_15 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000000000000000000000000000000000000000000000002542 190.0
BYD3_k127_5012129_16 - - - - 0.000000000000000000000000000000000000000000000007555 180.0
BYD3_k127_5012129_17 Lipocalin-like domain K03098 - - 0.00000000000000000000000000000000000000000000007028 182.0
BYD3_k127_5012129_18 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000005739 123.0
BYD3_k127_5012129_19 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000001185 116.0
BYD3_k127_5012129_2 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 504.0
BYD3_k127_5012129_21 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000005547 64.0
BYD3_k127_5012129_3 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000743 488.0
BYD3_k127_5012129_4 Galactose-1-phosphate uridyl transferase, C-terminal domain K00965 GO:0003674,GO:0003824,GO:0004335,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006012,GO:0006793,GO:0006796,GO:0008108,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0009056,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0019200,GO:0019318,GO:0019320,GO:0019388,GO:0033499,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046835,GO:0046872,GO:0046914,GO:0070569,GO:0071704,GO:1901575 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 480.0
BYD3_k127_5012129_5 ABC transporter K10441 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 473.0
BYD3_k127_5012129_6 Bacterial protein of unknown function (DUF839) K07093 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 452.0
BYD3_k127_5012129_7 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003821 449.0
BYD3_k127_5012129_8 Galactokinase galactose-binding signature K00849 - 2.7.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 409.0
BYD3_k127_5012129_9 Belongs to the binding-protein-dependent transport system permease family K10440 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 389.0
BYD3_k127_5029863_0 POT family K03305 - - 1.789e-234 736.0
BYD3_k127_5029863_1 protein kinase activity K06915 - - 1.926e-211 681.0
BYD3_k127_5029863_10 His Kinase A (phosphoacceptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 500.0
BYD3_k127_5029863_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008723 466.0
BYD3_k127_5029863_12 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 460.0
BYD3_k127_5029863_13 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 411.0
BYD3_k127_5029863_14 Putative zinc-binding metallo-peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008524 402.0
BYD3_k127_5029863_15 Sugar (and other) transporter K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008903 398.0
BYD3_k127_5029863_16 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000375 380.0
BYD3_k127_5029863_17 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007196 375.0
BYD3_k127_5029863_18 HI0933-like protein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 354.0
BYD3_k127_5029863_19 Major Facilitator Superfamily K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 343.0
BYD3_k127_5029863_2 Sulfite reductase K00366,K00381,K00392 - 1.7.7.1,1.8.1.2,1.8.7.1 2.387e-197 632.0
BYD3_k127_5029863_20 Serine aminopeptidase, S33 K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 294.0
BYD3_k127_5029863_21 TonB-dependent Receptor Plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 301.0
BYD3_k127_5029863_22 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001848 281.0
BYD3_k127_5029863_23 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000154 253.0
BYD3_k127_5029863_24 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001394 241.0
BYD3_k127_5029863_25 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000749 240.0
BYD3_k127_5029863_26 ATPase activity K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000001772 243.0
BYD3_k127_5029863_27 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000001547 221.0
BYD3_k127_5029863_28 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000001036 213.0
BYD3_k127_5029863_29 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.000000000000000000000000000000000000000000000000000000003995 206.0
BYD3_k127_5029863_3 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000533 525.0
BYD3_k127_5029863_30 Uncharacterised protein family UPF0052 - - - 0.00000000000000000000000000000000000000000000000000000001664 209.0
BYD3_k127_5029863_31 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000614 205.0
BYD3_k127_5029863_32 Belongs to the peptidase S8 family K17734 - - 0.0000000000000000000000000000000000000000000000000000002083 219.0
BYD3_k127_5029863_33 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000001579 195.0
BYD3_k127_5029863_34 PFAM von Willebrand factor type A K07114,K12511 - - 0.0000000000000000000000000000000000000000000000001812 189.0
BYD3_k127_5029863_35 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000002501 175.0
BYD3_k127_5029863_36 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000008253 175.0
BYD3_k127_5029863_37 DinB family - - - 0.000000000000000000000000000000000000000000000108 178.0
BYD3_k127_5029863_38 Copper binding periplasmic protein CusF K07152 - - 0.0000000000000000000000000000000000000000000001994 189.0
BYD3_k127_5029863_39 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.0000000000000000000000000000000000000000000008372 173.0
BYD3_k127_5029863_4 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 506.0
BYD3_k127_5029863_40 - - - - 0.0000000000000000000000000000000000000000003112 169.0
BYD3_k127_5029863_41 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K03496 GO:0008150,GO:0022603,GO:0042173,GO:0042174,GO:0043937,GO:0043939,GO:0045595,GO:0045596,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0065007 - 0.000000000000000000000000000000000000000001756 165.0
BYD3_k127_5029863_42 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000103 161.0
BYD3_k127_5029863_43 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000000000000000000000006736 157.0
BYD3_k127_5029863_44 CarD-like/TRCF domain K07736 - - 0.0000000000000000000000000000000000004018 156.0
BYD3_k127_5029863_45 Methyltransferase type 11 - - - 0.0000000000000000000000000000000001424 140.0
BYD3_k127_5029863_46 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000003433 150.0
BYD3_k127_5029863_47 Putative inner membrane exporter, YdcZ K09936 - - 0.000000000000000000000000000005073 124.0
BYD3_k127_5029863_48 - - - - 0.0000000000000000000000000001674 119.0
BYD3_k127_5029863_49 COGs COG1668 ABC-type Na efflux pump permease component K01992 - - 0.0000000000000000000000000006565 131.0
BYD3_k127_5029863_5 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 501.0
BYD3_k127_5029863_50 Bacterial Fe(2+) trafficking - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0033554,GO:0034599,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0070887 - 0.00000000000000000000000000158 114.0
BYD3_k127_5029863_51 chlorophyll binding K03640 - - 0.0000000000000000000000009335 120.0
BYD3_k127_5029863_52 TPM domain - - - 0.000000000000000000000004914 115.0
BYD3_k127_5029863_53 protein conserved in bacteria K09800 - - 0.0000000000000000000001253 116.0
BYD3_k127_5029863_54 general stress protein - - - 0.0000000000000000000005121 100.0
BYD3_k127_5029863_55 nucleotidyltransferase activity - - - 0.000000000000000004973 93.0
BYD3_k127_5029863_56 Stress-induced bacterial acidophilic repeat motif - - - 0.000000000000001671 80.0
BYD3_k127_5029863_57 oxidoreductase activity - - - 0.000000000000003106 90.0
BYD3_k127_5029863_58 cell shape determination - - - 0.00000000001609 71.0
BYD3_k127_5029863_59 - - - - 0.00000000002049 74.0
BYD3_k127_5029863_6 Peptidase family M3 K01392 - 3.4.24.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 517.0
BYD3_k127_5029863_60 - - - - 0.00000000002122 77.0
BYD3_k127_5029863_61 - - - - 0.00003012 50.0
BYD3_k127_5029863_62 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.0000743 53.0
BYD3_k127_5029863_7 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 505.0
BYD3_k127_5029863_8 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 483.0
BYD3_k127_5029863_9 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 492.0
BYD3_k127_5067876_0 - - - - 6.136e-217 701.0
BYD3_k127_5067876_1 Protein of unknown function (DUF1587) - - - 7.782e-213 686.0
BYD3_k127_5067876_2 ankyrin repeat K15503 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007899 476.0
BYD3_k127_5067876_3 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 494.0
BYD3_k127_5067876_4 ioli protein K06606 - 5.3.99.11 0.0000000000000000000000154 111.0
BYD3_k127_5067876_5 TIGRFAM TonB K03832 - - 0.0000000000000000001998 99.0
BYD3_k127_5146717_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 9.875e-201 646.0
BYD3_k127_5146717_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 558.0
BYD3_k127_5146717_10 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002726 276.0
BYD3_k127_5146717_11 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001 268.0
BYD3_k127_5146717_12 Pfam:Pyridox_oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000014 232.0
BYD3_k127_5146717_13 TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000278 226.0
BYD3_k127_5146717_14 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000001458 210.0
BYD3_k127_5146717_15 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000000000000000000000000005688 209.0
BYD3_k127_5146717_16 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000003402 192.0
BYD3_k127_5146717_17 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000000004791 175.0
BYD3_k127_5146717_18 COG1555 DNA uptake protein and related DNA-binding proteins K02237 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000004988 89.0
BYD3_k127_5146717_19 - - - - 0.00000000000002251 86.0
BYD3_k127_5146717_2 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 515.0
BYD3_k127_5146717_20 - - - - 0.0000000003152 63.0
BYD3_k127_5146717_21 Domain of unknown function (DUF4382) - - - 0.0000000005705 68.0
BYD3_k127_5146717_22 - - - - 0.000002443 50.0
BYD3_k127_5146717_24 oligosaccharyl transferase activity - - - 0.0000145 58.0
BYD3_k127_5146717_25 PIN domain - - - 0.00001818 50.0
BYD3_k127_5146717_26 30S ribosomal protein S23 - - - 0.0001742 47.0
BYD3_k127_5146717_3 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 506.0
BYD3_k127_5146717_4 PFAM Sodium sulphate symporter K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 459.0
BYD3_k127_5146717_5 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 393.0
BYD3_k127_5146717_6 Polysaccharide biosynthesis protein K01784,K02473 - 5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000548 372.0
BYD3_k127_5146717_7 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 391.0
BYD3_k127_5146717_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 368.0
BYD3_k127_5146717_9 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003538 312.0
BYD3_k127_5149864_0 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 431.0
BYD3_k127_5149864_10 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000007355 220.0
BYD3_k127_5149864_11 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000004456 200.0
BYD3_k127_5149864_12 coenzyme binding K07071 - - 0.0000000000000000000000000000000000000000000001017 181.0
BYD3_k127_5149864_13 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000001086 172.0
BYD3_k127_5149864_14 - - - - 0.00000000000000000000000000000000000000000001745 170.0
BYD3_k127_5149864_16 - - - - 0.000000000000000000000000002615 119.0
BYD3_k127_5149864_17 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000000000000000000004028 104.0
BYD3_k127_5149864_18 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.000000000000000004842 93.0
BYD3_k127_5149864_19 Helix-turn-helix domain K15539 - - 0.00000001272 66.0
BYD3_k127_5149864_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 380.0
BYD3_k127_5149864_20 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.000001468 55.0
BYD3_k127_5149864_3 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009984 384.0
BYD3_k127_5149864_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 323.0
BYD3_k127_5149864_5 COG2366 Protein related to penicillin acylase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 332.0
BYD3_k127_5149864_6 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001261 260.0
BYD3_k127_5149864_7 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001309 253.0
BYD3_k127_5149864_8 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000006006 243.0
BYD3_k127_5149864_9 DNA-templated transcription, initiation K02405 - - 0.0000000000000000000000000000000000000000000000000000000004576 207.0
BYD3_k127_5153049_0 Phosphohydrolase-associated domain K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 362.0
BYD3_k127_5153049_1 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 329.0
BYD3_k127_5153049_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 316.0
BYD3_k127_5153049_3 Uncharacterized ACR, COG1399 K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000001692 116.0
BYD3_k127_5153049_4 Ribosomal L32p protein family K02911 - - 0.000000000000000000079 89.0
BYD3_k127_5222893_0 PFAM type II secretion system protein E K02283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 563.0
BYD3_k127_5222893_1 Gentisate 1,2-dioxygenase K00450 - 1.13.11.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 470.0
BYD3_k127_5222893_10 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000005778 216.0
BYD3_k127_5222893_11 Type II secretion system (T2SS), protein F K12510 - - 0.0000000000000000000000000000000000000000000000000000001264 214.0
BYD3_k127_5222893_12 PFAM Peptidoglycan-binding domain 1 protein K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000002139 194.0
BYD3_k127_5222893_13 TIGRFAM Flp pilus assembly protein CpaB K02279 - - 0.00000000000000000000000000000000000000000000002543 181.0
BYD3_k127_5222893_14 Belongs to the NiCoT transporter (TC 2.A.52) family K07241 - - 0.0000000000000000000000000000000000000000000002911 174.0
BYD3_k127_5222893_15 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000624 186.0
BYD3_k127_5222893_16 AAA domain K02282 - - 0.00000000000000000000000000000000000000001215 169.0
BYD3_k127_5222893_17 Putative Flp pilus-assembly TadE/G-like - - - 0.000000000000000000000000000000000003393 152.0
BYD3_k127_5222893_18 - - - - 0.00000000000000000000000000000006818 135.0
BYD3_k127_5222893_2 Sugar (and other) transporter K08195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 459.0
BYD3_k127_5222893_20 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000001474 93.0
BYD3_k127_5222893_21 Type IV leader peptidase family K02278 - 3.4.23.43 0.000000000000001048 84.0
BYD3_k127_5222893_24 Flp Fap pilin component K02651 - - 0.00005882 53.0
BYD3_k127_5222893_25 Tetratricopeptide repeats - - - 0.0001861 53.0
BYD3_k127_5222893_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 428.0
BYD3_k127_5222893_4 PFAM AAA ATPase central domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 417.0
BYD3_k127_5222893_5 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 359.0
BYD3_k127_5222893_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 333.0
BYD3_k127_5222893_7 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 311.0
BYD3_k127_5222893_8 PFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000005318 258.0
BYD3_k127_5222893_9 type II secretion system K12511 - - 0.00000000000000000000000000000000000000000000000000000000000002432 226.0
BYD3_k127_5232644_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 1.158e-240 752.0
BYD3_k127_5232644_1 PQQ-like domain K05889 - 1.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 523.0
BYD3_k127_5232644_2 PFAM Band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 441.0
BYD3_k127_5232644_3 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.000000000000000000000000000000000000000000000002418 177.0
BYD3_k127_5232644_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.000000000000000000000000000006685 129.0
BYD3_k127_5232644_5 cellular response to DNA damage stimulus K07340 - - 0.000000000000000000000000007067 115.0
BYD3_k127_5235712_0 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000005163 121.0
BYD3_k127_5235712_1 Wd40 repeat-containing protein - - - 0.00000000000000001505 97.0
BYD3_k127_5251042_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001273 268.0
BYD3_k127_5251042_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000007261 250.0
BYD3_k127_5251042_2 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000001068 170.0
BYD3_k127_5251042_3 VanZ like family - - - 0.000000000000000000000000006746 127.0
BYD3_k127_5251042_4 - - - - 0.000000000009583 78.0
BYD3_k127_5251042_5 photosynthesis - - - 0.0001409 55.0
BYD3_k127_5258489_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 1.001e-261 826.0
BYD3_k127_5258489_1 PFAM tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 3.117e-221 694.0
BYD3_k127_5258489_10 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000002903 244.0
BYD3_k127_5258489_11 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.00000000000000000000000000000000000000000000000000000000000008488 224.0
BYD3_k127_5258489_12 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000001165 225.0
BYD3_k127_5258489_13 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000007986 198.0
BYD3_k127_5258489_14 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000007241 138.0
BYD3_k127_5258489_15 Nucleotidyl transferase K00966,K16881 - 2.7.7.13,5.4.2.8 0.0000000000000000000000000000000002114 146.0
BYD3_k127_5258489_16 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000002644 143.0
BYD3_k127_5258489_17 RimP C-terminal SH3 domain K09748 - - 0.000000000000000000000000000001973 125.0
BYD3_k127_5258489_18 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000001548 121.0
BYD3_k127_5258489_19 CYTH K05873 - 4.6.1.1 0.0000000000000000000000003699 113.0
BYD3_k127_5258489_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 2.383e-206 674.0
BYD3_k127_5258489_20 Protein of unknown function (DUF503) K09764 - - 0.0000000000008216 73.0
BYD3_k127_5258489_21 adenosine 5'-monophosphoramidase activity - - - 0.000000000002237 77.0
BYD3_k127_5258489_22 - - - - 0.00000004912 64.0
BYD3_k127_5258489_23 cytochrome C oxidase K02275 - 1.9.3.1 0.000952 47.0
BYD3_k127_5258489_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 443.0
BYD3_k127_5258489_4 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 436.0
BYD3_k127_5258489_5 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006749 432.0
BYD3_k127_5258489_6 Metallopeptidase family M24 K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 363.0
BYD3_k127_5258489_7 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 336.0
BYD3_k127_5258489_8 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 333.0
BYD3_k127_5258489_9 Peptidase M48 K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000001016 276.0
BYD3_k127_5263298_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1050.0
BYD3_k127_5263298_1 cell redox homeostasis K00383 - 1.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 488.0
BYD3_k127_5263298_10 transcriptional regulator PadR family - - - 0.00000000000000000000000006286 111.0
BYD3_k127_5263298_11 Transcriptional regulator K13653 - - 0.00000000000000000000009874 111.0
BYD3_k127_5263298_12 PFAM glycoside hydrolase 15-related - - - 0.000000000000000000008984 96.0
BYD3_k127_5263298_13 - - - - 0.0000000000000000001568 89.0
BYD3_k127_5263298_15 Glycosyl hydrolases family 15 - - - 0.00000000002301 69.0
BYD3_k127_5263298_16 - - - - 0.000000000138 69.0
BYD3_k127_5263298_17 - - - - 0.0000005073 61.0
BYD3_k127_5263298_18 Receptor - - - 0.000006572 57.0
BYD3_k127_5263298_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 455.0
BYD3_k127_5263298_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 286.0
BYD3_k127_5263298_4 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000003359 267.0
BYD3_k127_5263298_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000008678 242.0
BYD3_k127_5263298_6 Glycosyl hydrolases family 15 - - - 0.00000000000000000000000000000000000000000000000001257 186.0
BYD3_k127_5263298_7 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000002002 166.0
BYD3_k127_5263298_8 TIR domain - - - 0.00000000000000000000000000000000002008 150.0
BYD3_k127_5263298_9 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000002329 142.0
BYD3_k127_5312648_0 Oligopeptidase F K08602 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 614.0
BYD3_k127_5312648_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 436.0
BYD3_k127_5312648_10 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000004737 155.0
BYD3_k127_5312648_11 VTC domain - - - 0.0000000000000000000000000000000000001685 150.0
BYD3_k127_5312648_13 - - - - 0.00000000002955 71.0
BYD3_k127_5312648_14 - - - - 0.00000002003 61.0
BYD3_k127_5312648_15 - - - - 0.00002944 56.0
BYD3_k127_5312648_2 CotH kinase protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 439.0
BYD3_k127_5312648_3 CotH kinase protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003473 434.0
BYD3_k127_5312648_4 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007554 422.0
BYD3_k127_5312648_5 mannose-ethanolamine phosphotransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 372.0
BYD3_k127_5312648_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 357.0
BYD3_k127_5312648_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008348 314.0
BYD3_k127_5312648_8 Uncharacterized conserved protein (COG2071) K09166 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004731 268.0
BYD3_k127_5312648_9 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000000000000002215 156.0
BYD3_k127_5359995_0 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005755 292.0
BYD3_k127_5359995_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000132 156.0
BYD3_k127_5359995_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000131 160.0
BYD3_k127_5359995_3 - K02172 - - 0.0000000000000000000000000000002824 143.0
BYD3_k127_5359995_4 Protein of unknown function (DUF3738) - - - 0.000000000000000000000000001253 129.0
BYD3_k127_5359995_5 - K02172 - - 0.000000000000000045 91.0
BYD3_k127_5359995_6 Transcriptional regulator PadR-like family - - - 0.00005876 49.0
BYD3_k127_5446896_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 422.0
BYD3_k127_5446896_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000002649 248.0
BYD3_k127_5446896_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000008023 224.0
BYD3_k127_5446896_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000002838 163.0
BYD3_k127_5446896_4 Preprotein translocase, YajC K03210 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000004082 93.0
BYD3_k127_5446896_5 Protein of unknown function (DUF502) - - - 0.0000000000000000009854 96.0
BYD3_k127_5460582_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.059e-274 854.0
BYD3_k127_5460582_1 DNA topological change K03168 - 5.99.1.2 2.037e-232 745.0
BYD3_k127_5460582_10 Belongs to the UPF0235 family K09131 - - 0.0000000000000001237 85.0
BYD3_k127_5460582_2 5TM C-terminal transporter carbon starvation CstA K06200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 464.0
BYD3_k127_5460582_3 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 452.0
BYD3_k127_5460582_4 Amidohydrolase family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 354.0
BYD3_k127_5460582_5 2-keto-4-pentenoate hydratase K02554 - 4.2.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 331.0
BYD3_k127_5460582_6 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003343 288.0
BYD3_k127_5460582_7 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000006104 217.0
BYD3_k127_5460582_8 Ankyrin repeat - - - 0.00000000000000000000000000000000000002061 162.0
BYD3_k127_5460582_9 COG3404 Methenyl tetrahydrofolate cyclohydrolase - - - 0.00000000000000000006161 97.0
BYD3_k127_5506477_0 Dehydrogenase - - - 0.00000000000000000000000000000000000000005886 156.0
BYD3_k127_5506477_1 regulation of response to stimulus - - - 0.000000000000000000000000000000000000002029 154.0
BYD3_k127_5506477_2 TRAP transporter solute receptor, TAXI family K07080 - - 0.00000000007002 74.0
BYD3_k127_5524248_0 Amidohydrolase K10221 - 3.1.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005452 546.0
BYD3_k127_5524248_1 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 441.0
BYD3_k127_5524248_2 protocatechuate 3,4-dioxygenase, beta subunit' K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007082 323.0
BYD3_k127_5524248_3 Oxidoreductase family, NAD-binding Rossmann fold K10219 - 1.1.1.312 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007253 319.0
BYD3_k127_5524248_4 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 317.0
BYD3_k127_5524248_5 Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3- dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2- hydroxy-6-ketononatrienedioate, respectively K04099,K04101 - 1.13.11.57,1.13.11.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 310.0
BYD3_k127_5524248_6 Alpha/beta hydrolase family K01055 - 3.1.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000001919 252.0
BYD3_k127_5524248_7 Dioxygenase K00448 - 1.13.11.3 0.000000000000000000000000000000000000000000000000001707 190.0
BYD3_k127_5524248_8 - - - - 0.0000000000000000000000000005143 124.0
BYD3_k127_5531106_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 525.0
BYD3_k127_5531106_1 Amino acid kinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 418.0
BYD3_k127_5531106_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 374.0
BYD3_k127_5531106_3 PFAM peptidase K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 324.0
BYD3_k127_5531106_4 glucose sorbosone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007403 317.0
BYD3_k127_5531106_5 Belongs to the DapB family K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000001077 225.0
BYD3_k127_5531106_6 protein histidine kinase activity - - - 0.0000000000000000000000001715 114.0
BYD3_k127_5536823_0 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005337 312.0
BYD3_k127_5536823_1 glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000001168 231.0
BYD3_k127_5548542_0 Elongation factor G, domain IV K02355 - - 1.18e-237 762.0
BYD3_k127_5548542_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 582.0
BYD3_k127_5548542_10 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000001353 194.0
BYD3_k127_5548542_11 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000265 181.0
BYD3_k127_5548542_12 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000004817 180.0
BYD3_k127_5548542_13 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000001671 168.0
BYD3_k127_5548542_14 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000004092 164.0
BYD3_k127_5548542_15 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000339 143.0
BYD3_k127_5548542_16 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000009297 146.0
BYD3_k127_5548542_17 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000009243 104.0
BYD3_k127_5548542_18 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000007851 95.0
BYD3_k127_5548542_19 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 - - 0.000000000000000006004 87.0
BYD3_k127_5548542_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 483.0
BYD3_k127_5548542_20 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000001182 70.0
BYD3_k127_5548542_21 Ribosomal protein L30 K02907 - - 0.000000000006537 75.0
BYD3_k127_5548542_22 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000002762 63.0
BYD3_k127_5548542_23 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000008213 55.0
BYD3_k127_5548542_3 Metallopeptidase family M24 K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006446 312.0
BYD3_k127_5548542_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 289.0
BYD3_k127_5548542_5 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000771 275.0
BYD3_k127_5548542_6 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000000000005725 233.0
BYD3_k127_5548542_7 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000009019 216.0
BYD3_k127_5548542_8 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000001998 209.0
BYD3_k127_5548542_9 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000001563 205.0
BYD3_k127_5560483_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.0 1106.0
BYD3_k127_5560483_1 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003977 293.0
BYD3_k127_5560483_2 Penicillinase repressor - - - 0.000000000000000000000000000000000000004884 149.0
BYD3_k127_561270_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 479.0
BYD3_k127_561270_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.17,6.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 469.0
BYD3_k127_561270_10 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000009792 214.0
BYD3_k127_561270_11 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000001524 176.0
BYD3_k127_561270_12 - - - - 0.00000000000000000000000000000000000004015 156.0
BYD3_k127_561270_13 B3/4 domain - - - 0.000000000000000000000000000000001738 137.0
BYD3_k127_561270_2 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 382.0
BYD3_k127_561270_3 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K05816 - 3.6.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 345.0
BYD3_k127_561270_4 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 314.0
BYD3_k127_561270_5 Peptidase S46 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 320.0
BYD3_k127_561270_6 PFAM extracellular solute-binding protein family 1 K02027,K10236 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005976 299.0
BYD3_k127_561270_7 binding-protein-dependent transport systems inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006878 276.0
BYD3_k127_561270_8 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000205 267.0
BYD3_k127_561270_9 PFAM binding-protein-dependent transport systems inner membrane component K02025,K10237 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001354 250.0
BYD3_k127_5630204_0 NHL repeat - - - 0.00000000000000000000000000000000000000000000001114 181.0
BYD3_k127_5669022_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 1.06e-199 672.0
BYD3_k127_5669022_1 TLC ATP/ADP transporter K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002128 300.0
BYD3_k127_5717071_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1475.0
BYD3_k127_5717071_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 8.103e-230 723.0
BYD3_k127_5717071_10 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007381 422.0
BYD3_k127_5717071_11 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009782 391.0
BYD3_k127_5717071_12 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 387.0
BYD3_k127_5717071_13 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 374.0
BYD3_k127_5717071_14 Acts as a magnesium transporter K03281,K04767,K06213,K15986 GO:0000287,GO:0003674,GO:0005488,GO:0005515,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015693,GO:0030001,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0051179,GO:0051234,GO:0070838,GO:0072511 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 380.0
BYD3_k127_5717071_15 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 375.0
BYD3_k127_5717071_16 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 389.0
BYD3_k127_5717071_17 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008145 339.0
BYD3_k127_5717071_18 Histidine kinase K10715 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 353.0
BYD3_k127_5717071_19 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 366.0
BYD3_k127_5717071_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 3.268e-201 642.0
BYD3_k127_5717071_20 Belongs to the SIS family. GutQ KpsF subfamily K01627,K03281,K06041 - 2.5.1.55,5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000465 342.0
BYD3_k127_5717071_21 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009889 338.0
BYD3_k127_5717071_22 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 334.0
BYD3_k127_5717071_23 pilus assembly protein K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 325.0
BYD3_k127_5717071_24 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006914 320.0
BYD3_k127_5717071_25 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 314.0
BYD3_k127_5717071_26 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006164 305.0
BYD3_k127_5717071_27 Xaa-Pro dipeptidase K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001239 288.0
BYD3_k127_5717071_28 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001435 276.0
BYD3_k127_5717071_29 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007587 249.0
BYD3_k127_5717071_3 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 595.0
BYD3_k127_5717071_30 PFAM CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000001688 225.0
BYD3_k127_5717071_31 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000003126 213.0
BYD3_k127_5717071_32 NDK K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.0000000000000000000000000000000000000000000000000000001567 197.0
BYD3_k127_5717071_33 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000001659 203.0
BYD3_k127_5717071_34 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.00000000000000000000000000000000000000000000000000002143 204.0
BYD3_k127_5717071_35 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000001204 179.0
BYD3_k127_5717071_36 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000009283 169.0
BYD3_k127_5717071_37 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000004912 167.0
BYD3_k127_5717071_38 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000000000000000005248 179.0
BYD3_k127_5717071_39 DNA-templated transcription, initiation - - - 0.00000000000000000000000000000000000000000002252 176.0
BYD3_k127_5717071_4 Sodium:neurotransmitter symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 548.0
BYD3_k127_5717071_40 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000009919 170.0
BYD3_k127_5717071_41 Belongs to the argininosuccinate synthase family. Type 2 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.000000000000000000000000000000000000001156 149.0
BYD3_k127_5717071_42 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000001881 154.0
BYD3_k127_5717071_43 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000003638 137.0
BYD3_k127_5717071_44 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000003843 138.0
BYD3_k127_5717071_45 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000005294 134.0
BYD3_k127_5717071_46 Stress responsive alpha-beta barrel - - - 0.0000000000000000000000000006838 117.0
BYD3_k127_5717071_47 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000001386 110.0
BYD3_k127_5717071_48 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000003411 102.0
BYD3_k127_5717071_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004226 522.0
BYD3_k127_5717071_50 protein contain chitin-binding domain type 3 K01183,K21606 - 3.2.1.14,3.2.1.202 0.00000000000000003099 94.0
BYD3_k127_5717071_51 peptidyl-tyrosine sulfation - - - 0.000000000000001694 90.0
BYD3_k127_5717071_52 Protein of unknown function (DUF2905) - - - 0.000000000000003447 76.0
BYD3_k127_5717071_53 PFAM Pilus assembly protein PilO K02664 - - 0.0000000000001305 83.0
BYD3_k127_5717071_54 - - - - 0.00000000002905 70.0
BYD3_k127_5717071_55 PFAM Fimbrial assembly family protein K02663 - - 0.0000000002136 71.0
BYD3_k127_5717071_56 Tetratricopeptide repeats - - - 0.0000000003393 66.0
BYD3_k127_5717071_57 serine-type endopeptidase activity K04771 - 3.4.21.107 0.000003071 58.0
BYD3_k127_5717071_58 PFAM Tetratricopeptide repeat - - - 0.00002098 57.0
BYD3_k127_5717071_59 Patatin-like phospholipase K07001 - - 0.00004999 55.0
BYD3_k127_5717071_6 AAA ATPase K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005465 501.0
BYD3_k127_5717071_60 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 0.00005418 46.0
BYD3_k127_5717071_61 - - - - 0.0003696 50.0
BYD3_k127_5717071_7 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 470.0
BYD3_k127_5717071_8 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 443.0
BYD3_k127_5717071_9 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 437.0
BYD3_k127_5751887_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 385.0
BYD3_k127_5751887_1 SnoaL-like domain - - - 0.00000000000000000000000000002628 117.0
BYD3_k127_575564_0 Response regulator receiver - - - 2.798e-195 629.0
BYD3_k127_575564_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 484.0
BYD3_k127_575564_10 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009799 287.0
BYD3_k127_575564_11 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000004707 184.0
BYD3_k127_575564_12 ribonuclease activity - - - 0.00000000000000000000000000000000000000000000001329 175.0
BYD3_k127_575564_13 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000001694 133.0
BYD3_k127_575564_14 Protein of unknown function (DUF3810) - - - 0.00000000000000000000000002016 123.0
BYD3_k127_575564_15 peptidyl-tyrosine sulfation - - - 0.00000000000000000000135 110.0
BYD3_k127_575564_16 Histidine kinase K07778 - 2.7.13.3 0.000000000000000000007122 94.0
BYD3_k127_575564_17 SpoVT AbrB like domain - - - 0.00000000000000000001075 94.0
BYD3_k127_575564_18 MacB-like periplasmic core domain - - - 0.00000000000000000002329 101.0
BYD3_k127_575564_2 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007429 443.0
BYD3_k127_575564_20 MacB-like periplasmic core domain - - - 0.00000000001008 75.0
BYD3_k127_575564_21 Carboxypeptidase regulatory-like domain - - - 0.000002933 58.0
BYD3_k127_575564_22 Carboxypeptidase regulatory-like domain - - - 0.0001283 53.0
BYD3_k127_575564_3 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 362.0
BYD3_k127_575564_4 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 345.0
BYD3_k127_575564_5 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 336.0
BYD3_k127_575564_6 Sodium:dicarboxylate symporter family K03309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 336.0
BYD3_k127_575564_7 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 343.0
BYD3_k127_575564_8 eRF1 domain 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 303.0
BYD3_k127_575564_9 helix_turn_helix, Lux Regulon K07693 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001025 273.0
BYD3_k127_5870014_0 DNA topological change - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009374 413.0
BYD3_k127_5870014_1 Protein of unknown function (DUF1552) - - - 0.00000000000005456 74.0
BYD3_k127_5874387_0 DNA topological change K03168 - 5.99.1.2 1.995e-245 782.0
BYD3_k127_5874387_1 Aldehyde dehydrogenase family K00128 - 1.2.1.3 1.046e-234 734.0
BYD3_k127_5874387_10 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 396.0
BYD3_k127_5874387_11 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 382.0
BYD3_k127_5874387_12 HpcH/HpaI aldolase/citrate lyase family K18292 - 4.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 332.0
BYD3_k127_5874387_13 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 329.0
BYD3_k127_5874387_14 acr, cog1565 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 319.0
BYD3_k127_5874387_15 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 307.0
BYD3_k127_5874387_16 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 299.0
BYD3_k127_5874387_17 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 293.0
BYD3_k127_5874387_18 membrane K07148 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 310.0
BYD3_k127_5874387_19 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001201 281.0
BYD3_k127_5874387_2 acyl-CoA dehydrogenase activity K00249 - 1.3.8.7 4.117e-198 625.0
BYD3_k127_5874387_20 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000008364 267.0
BYD3_k127_5874387_21 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000000000000000000001738 211.0
BYD3_k127_5874387_22 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000001675 179.0
BYD3_k127_5874387_23 Domain of unknown function (DUF4159) - - - 0.000000000000000000000000000000000000000001193 168.0
BYD3_k127_5874387_24 Serine aminopeptidase, S33 K19311 GO:0003674,GO:0003824,GO:0005488,GO:0005504,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009062,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016042,GO:0016054,GO:0016298,GO:0016787,GO:0016788,GO:0019752,GO:0031406,GO:0032787,GO:0033293,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0071214,GO:0071467,GO:0071468,GO:0071704,GO:0072329,GO:0104004,GO:1901575 - 0.0000000000000000000000000000000000000002945 166.0
BYD3_k127_5874387_25 decarboxylase K01607 - 4.1.1.44 0.0000000000000000000000000000001292 135.0
BYD3_k127_5874387_26 - K02172 - - 0.00000000000000000000000000001071 129.0
BYD3_k127_5874387_27 membrane - - - 0.0000000000000000000000001122 122.0
BYD3_k127_5874387_28 BON domain - - - 0.000000000000000000000000371 120.0
BYD3_k127_5874387_29 YCII-related domain - - - 0.00000000000000000000008663 104.0
BYD3_k127_5874387_3 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 606.0
BYD3_k127_5874387_30 - - - - 0.0000000000000000001289 96.0
BYD3_k127_5874387_31 Cell wall-active antibiotics response 4TMS YvqF - - - 0.000000000000000004908 95.0
BYD3_k127_5874387_32 membrane - - - 0.0000000000004742 77.0
BYD3_k127_5874387_33 Tetratricopeptide repeats - - - 0.0000000004406 72.0
BYD3_k127_5874387_36 - - - - 0.00000007287 60.0
BYD3_k127_5874387_37 Cell wall-active antibiotics response 4TMS YvqF - - - 0.000001597 60.0
BYD3_k127_5874387_38 nerve growth factor signaling pathway K12460 GO:0000186,GO:0001932,GO:0001934,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005770,GO:0005829,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007399,GO:0008150,GO:0009719,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010720,GO:0010975,GO:0010976,GO:0012505,GO:0019207,GO:0019220,GO:0019222,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0022008,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0030165,GO:0030234,GO:0031323,GO:0031325,GO:0031344,GO:0031346,GO:0031399,GO:0031401,GO:0031410,GO:0031982,GO:0032147,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032991,GO:0033674,GO:0038179,GO:0038180,GO:0042221,GO:0042325,GO:0042327,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043549,GO:0044093,GO:0044424,GO:0044444,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045859,GO:0045860,GO:0045937,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051716,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0065007,GO:0065009,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071900,GO:0071902,GO:0080090,GO:0097708,GO:0098772,GO:0120035,GO:1902531,GO:1902533,GO:1990089,GO:1990090,GO:2000026 - 0.00004446 49.0
BYD3_k127_5874387_4 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 560.0
BYD3_k127_5874387_5 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000901 488.0
BYD3_k127_5874387_6 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 497.0
BYD3_k127_5874387_7 Transporter, DASS family K11106,K14445 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 474.0
BYD3_k127_5874387_8 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 439.0
BYD3_k127_5874387_9 Cytochrome c K08685 - 1.4.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632 428.0
BYD3_k127_5879188_0 Pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.0 1174.0
BYD3_k127_5879188_1 PFAM CobN magnesium chelatase K02230 - 6.6.1.2 0.0 1090.0
BYD3_k127_5879188_10 Sensor histidine kinase, HAMP domain-containing K07644 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 314.0
BYD3_k127_5879188_11 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002338 255.0
BYD3_k127_5879188_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005675 252.0
BYD3_k127_5879188_13 - - - - 0.000000000000000000000000000000000000000006295 167.0
BYD3_k127_5879188_14 Uncharacterised ArCR, COG2043 - - - 0.00000000000000000000000000000000000002684 153.0
BYD3_k127_5879188_15 Uncharacterized conserved protein (DUF2149) - - - 0.0000000000000000000000000000001002 127.0
BYD3_k127_5879188_16 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000009668 119.0
BYD3_k127_5879188_17 Rieske-like [2Fe-2S] domain K00363 - 1.7.1.15 0.0000000000000000000000000105 126.0
BYD3_k127_5879188_18 MotA/TolQ/ExbB proton channel family - - - 0.0000000000000000000005013 106.0
BYD3_k127_5879188_19 Protein of unknown function (DUF3365) - - - 0.0000000000000000004169 86.0
BYD3_k127_5879188_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1064.0
BYD3_k127_5879188_20 integral membrane protein K02221 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000002243 70.0
BYD3_k127_5879188_3 NMT1-like family K15576 - - 2.043e-218 689.0
BYD3_k127_5879188_4 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 500.0
BYD3_k127_5879188_5 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 406.0
BYD3_k127_5879188_6 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009088 351.0
BYD3_k127_5879188_7 ANTAR K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 319.0
BYD3_k127_5879188_8 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 306.0
BYD3_k127_5879188_9 Alginate export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 311.0
BYD3_k127_5879737_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 2.128e-220 698.0
BYD3_k127_5879737_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.15 2.206e-199 635.0
BYD3_k127_5879737_10 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003508 287.0
BYD3_k127_5879737_11 COGs COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008896 289.0
BYD3_k127_5879737_12 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000004694 279.0
BYD3_k127_5879737_13 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002404 265.0
BYD3_k127_5879737_14 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000003352 227.0
BYD3_k127_5879737_15 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000834 213.0
BYD3_k127_5879737_16 - - - - 0.000000000000000000000000000000000000000000000002022 184.0
BYD3_k127_5879737_17 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000001058 177.0
BYD3_k127_5879737_18 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07710 - 2.7.13.3 0.0000000000000000000000000000000000000001141 172.0
BYD3_k127_5879737_19 Ammonium Transporter K03320 - - 0.00000000000000000000000000000000000001195 148.0
BYD3_k127_5879737_2 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 536.0
BYD3_k127_5879737_20 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.0000000000000000000000000000000000009399 162.0
BYD3_k127_5879737_21 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000364 142.0
BYD3_k127_5879737_22 - - - - 0.000000000000000000000000116 118.0
BYD3_k127_5879737_23 Pfam:N_methyl_2 - - - 0.00000000000000001009 91.0
BYD3_k127_5879737_24 - - - - 0.0000000000000000709 91.0
BYD3_k127_5879737_25 Pfam:N_methyl_2 - - - 0.000000000000001907 84.0
BYD3_k127_5879737_26 - - - - 0.00000000000000281 87.0
BYD3_k127_5879737_27 - - - - 0.0000000000001062 82.0
BYD3_k127_5879737_28 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117,K03646 - - 0.000000000001081 72.0
BYD3_k127_5879737_29 Thioredoxin - - - 0.00000001682 66.0
BYD3_k127_5879737_3 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 460.0
BYD3_k127_5879737_30 COG0457 FOG TPR repeat - - - 0.00003918 55.0
BYD3_k127_5879737_31 pilus assembly protein PilW K02672 - - 0.00007101 55.0
BYD3_k127_5879737_32 Yip1 domain - - - 0.0002172 51.0
BYD3_k127_5879737_33 long-chain fatty acid transport protein - - - 0.0002232 53.0
BYD3_k127_5879737_34 General secretion pathway protein K02457 - - 0.0003357 51.0
BYD3_k127_5879737_4 Type II secretion system (T2SS), protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 451.0
BYD3_k127_5879737_5 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 452.0
BYD3_k127_5879737_6 response regulator K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 456.0
BYD3_k127_5879737_7 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009644 452.0
BYD3_k127_5879737_8 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006188 308.0
BYD3_k127_5879737_9 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003345 296.0
BYD3_k127_5890566_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 2.359e-224 712.0
BYD3_k127_5890566_1 AbgT putative transporter family K12942 - - 7.87e-205 649.0
BYD3_k127_5890566_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000006076 127.0
BYD3_k127_5890566_11 - - - - 0.00000000000000000000000000003206 128.0
BYD3_k127_5890566_12 - - - - 0.00000000000000000000000001771 124.0
BYD3_k127_5890566_13 - - - - 0.0000000000000000000000002128 110.0
BYD3_k127_5890566_14 - - - - 0.000000000000000000000003867 114.0
BYD3_k127_5890566_15 - - - - 0.0000000000000005606 91.0
BYD3_k127_5890566_16 - - - - 0.00000002164 66.0
BYD3_k127_5890566_17 Lipocalin-like domain - - - 0.0001785 54.0
BYD3_k127_5890566_2 oligopeptide transporter, OPT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 624.0
BYD3_k127_5890566_3 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 404.0
BYD3_k127_5890566_4 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000004345 233.0
BYD3_k127_5890566_5 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000003575 201.0
BYD3_k127_5890566_6 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000001775 183.0
BYD3_k127_5890566_7 Bacteriocin-protection protein - - - 0.00000000000000000000000000000000000000000000000006008 198.0
BYD3_k127_5890566_8 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000000001858 161.0
BYD3_k127_5890566_9 peptidase activity - - - 0.00000000000000000000000000000004325 130.0
BYD3_k127_5909906_0 amine dehydrogenase activity K17285 - - 2.019e-236 737.0
BYD3_k127_5909906_1 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 576.0
BYD3_k127_5909906_2 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 511.0
BYD3_k127_5909906_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008482 402.0
BYD3_k127_5909906_4 NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 293.0
BYD3_k127_5909906_5 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000008546 211.0
BYD3_k127_5909906_6 - - - - 0.00000000000000000000000000000000000000000000000000000000177 206.0
BYD3_k127_5909906_7 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000004475 172.0
BYD3_k127_5909906_8 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000000202 118.0
BYD3_k127_5909906_9 domain, Protein - - - 0.0000139 54.0
BYD3_k127_5911530_0 Peptidase family M1 domain - - - 2.055e-229 725.0
BYD3_k127_5911530_1 radical SAM domain protein - - - 1.522e-205 651.0
BYD3_k127_5911530_2 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008399 497.0
BYD3_k127_5911530_3 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 340.0
BYD3_k127_5911530_4 - - - - 0.000000000000000000000000000000000000000000000000125 192.0
BYD3_k127_5934491_0 PQQ enzyme repeat K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005061 602.0
BYD3_k127_5934491_1 PQQ-like domain K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005857 316.0
BYD3_k127_5934491_2 - - - - 0.0000000000000000000000000000001147 138.0
BYD3_k127_5934491_3 - - - - 0.000000000000000000000000000004952 134.0
BYD3_k127_5934491_4 - - - - 0.0000000000000000000000000001012 130.0
BYD3_k127_5938199_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 484.0
BYD3_k127_5938199_1 Two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006401 455.0
BYD3_k127_5938199_10 general secretion pathway protein G K02456 - - 0.000009253 58.0
BYD3_k127_5938199_11 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.00005154 56.0
BYD3_k127_5938199_2 PFAM Bacterial type II secretion system protein F domain K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000003708 249.0
BYD3_k127_5938199_3 AAA domain K02450 - - 0.000000000000000000000000000000000000000000000000000000000000000009661 234.0
BYD3_k127_5938199_4 PFAM ATP-binding region, ATPase domain protein K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000007685 205.0
BYD3_k127_5938199_5 HD domain - - - 0.0000000000000000000000000000000000000000000000002972 190.0
BYD3_k127_5938199_6 Belongs to the GSP D family K02666 - - 0.000000000000000000000000000000000000000000000009275 192.0
BYD3_k127_5938199_7 2OG-Fe(II) oxygenase superfamily K07336,K07394 - - 0.0000000000001059 83.0
BYD3_k127_5938199_8 Prokaryotic N-terminal methylation motif K02456,K02650,K10926 - - 0.0000001157 62.0
BYD3_k127_5938199_9 tetratricopeptide repeat - - - 0.000002227 59.0
BYD3_k127_5938325_0 Belongs to the UPF0753 family K09822 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 431.0
BYD3_k127_5940024_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 375.0
BYD3_k127_5940024_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000004121 201.0
BYD3_k127_5948657_0 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 3.499e-232 728.0
BYD3_k127_5948657_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009955 422.0
BYD3_k127_5948657_10 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000003352 81.0
BYD3_k127_5948657_11 - - - - 0.00000002403 64.0
BYD3_k127_5948657_12 Histidine kinase - - - 0.00000003619 60.0
BYD3_k127_5948657_13 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000004869 49.0
BYD3_k127_5948657_14 PFAM Tetratricopeptide - - - 0.0001782 52.0
BYD3_k127_5948657_2 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 327.0
BYD3_k127_5948657_3 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003307 298.0
BYD3_k127_5948657_4 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002753 291.0
BYD3_k127_5948657_5 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001473 252.0
BYD3_k127_5948657_6 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000006569 248.0
BYD3_k127_5948657_7 - K01992,K19341 - - 0.000000000000000000000000000000001512 141.0
BYD3_k127_5948657_8 PFAM Pyrrolo-quinoline quinone K00117 - 1.1.5.2 0.0000000000000000000004606 97.0
BYD3_k127_5948657_9 - - - - 0.000000000000001777 88.0
BYD3_k127_5948870_0 Dehydrogenase K17760 - 1.1.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000002124 246.0
BYD3_k127_5948870_1 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008427 252.0
BYD3_k127_5948870_2 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000309 222.0
BYD3_k127_5960801_0 PFAM Radical SAM - - - 2.618e-208 683.0
BYD3_k127_5960801_1 lyase activity K01667 - 4.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 454.0
BYD3_k127_5960801_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 372.0
BYD3_k127_5960801_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 304.0
BYD3_k127_5960801_4 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000001147 185.0
BYD3_k127_5960801_5 Histidine kinase K02484,K13924 - 2.1.1.80,2.7.13.3,3.1.1.61 0.00000000004706 71.0
BYD3_k127_6012014_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 2.174e-259 808.0
BYD3_k127_6012014_1 Protein involved in catalytic activity, cation binding and carbohydrate metabolic process K05343 - 3.2.1.1,5.4.99.16 1.063e-237 749.0
BYD3_k127_6012014_10 COG0569 K transport systems NAD-binding component K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000512 343.0
BYD3_k127_6012014_11 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 299.0
BYD3_k127_6012014_12 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000005437 277.0
BYD3_k127_6012014_13 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005469 258.0
BYD3_k127_6012014_14 Polysaccharide biosynthesis protein K15856 - 1.1.1.281 0.0000000000000000000000000000000000000000000000000000000000000000000000007489 261.0
BYD3_k127_6012014_15 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000005662 244.0
BYD3_k127_6012014_16 Deoxynucleoside kinase K15518 - 2.7.1.113 0.00000000000000000000000000000000000000000000000000000000000000645 223.0
BYD3_k127_6012014_17 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000002495 210.0
BYD3_k127_6012014_18 acid phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000003139 195.0
BYD3_k127_6012014_19 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774,K22110 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0009279,GO:0015267,GO:0015288,GO:0015749,GO:0015750,GO:0015751,GO:0015757,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031975,GO:0034219,GO:0044462,GO:0044464,GO:0046323,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:1904659 - 0.000000000000000000000000000000000000000001639 179.0
BYD3_k127_6012014_2 WD40-like Beta Propeller Repeat - - - 3.45e-203 668.0
BYD3_k127_6012014_20 AAA domain - - - 0.00000000000000000000000000000000000000004416 156.0
BYD3_k127_6012014_21 GDP-mannose mannosyl hydrolase activity K01858,K03207,K03574 - 3.6.1.55,5.5.1.4 0.0000000000000000000000000000000000007974 144.0
BYD3_k127_6012014_22 Thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000000000004826 140.0
BYD3_k127_6012014_23 Domain of unknown function (DUF4142) K08995 - - 0.000000000000000001427 96.0
BYD3_k127_6012014_24 peptidyl-tyrosine sulfation - - - 0.00000000001208 78.0
BYD3_k127_6012014_25 ubiE/COQ5 methyltransferase family - - - 0.0002437 51.0
BYD3_k127_6012014_3 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004329 487.0
BYD3_k127_6012014_4 Belongs to the ClpA ClpB family K03696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008021 457.0
BYD3_k127_6012014_5 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009319 431.0
BYD3_k127_6012014_6 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 403.0
BYD3_k127_6012014_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981 404.0
BYD3_k127_6012014_8 short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 361.0
BYD3_k127_6012014_9 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 352.0
BYD3_k127_6016624_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 7.31e-315 983.0
BYD3_k127_6016624_1 spore germination - - - 0.00000000000000000000000000000000000000000000000000000000000000000004347 243.0
BYD3_k127_6016624_2 Peptidase family M23 - - - 0.0000000000000000000000000000000000000003919 161.0
BYD3_k127_604595_0 Belongs to the TPP enzyme family K01576 - 4.1.1.7 1.376e-205 652.0
BYD3_k127_604595_1 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 442.0
BYD3_k127_604595_2 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 427.0
BYD3_k127_604595_3 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000116 221.0
BYD3_k127_604595_4 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000002339 195.0
BYD3_k127_6184806_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 5.1e-252 810.0
BYD3_k127_6184806_1 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 508.0
BYD3_k127_6184806_10 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000004177 153.0
BYD3_k127_6184806_11 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000002918 147.0
BYD3_k127_6184806_12 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000001504 141.0
BYD3_k127_6184806_13 Peptidase M56, BlaR1 - - - 0.00000000000000000000000005123 118.0
BYD3_k127_6184806_14 Predicted membrane protein (DUF2306) - - - 0.000000000000000000000001443 110.0
BYD3_k127_6184806_15 regulation of DNA repair K03565 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000004383 74.0
BYD3_k127_6184806_16 - - - - 0.0000000007375 66.0
BYD3_k127_6184806_17 FtsX-like permease family - - - 0.00000001186 66.0
BYD3_k127_6184806_18 Histidine kinase K07778 - 2.7.13.3 0.00001956 57.0
BYD3_k127_6184806_19 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K01426 - 3.5.1.4 0.0009509 51.0
BYD3_k127_6184806_2 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 484.0
BYD3_k127_6184806_3 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009052 447.0
BYD3_k127_6184806_4 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005192 451.0
BYD3_k127_6184806_5 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 415.0
BYD3_k127_6184806_6 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 325.0
BYD3_k127_6184806_7 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 314.0
BYD3_k127_6184806_8 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000724 234.0
BYD3_k127_6184806_9 - K02172 - - 0.00000000000000000000000000000000000000000002968 171.0
BYD3_k127_620150_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001105 305.0
BYD3_k127_620150_1 PIN domain - - - 0.000000000000000000000002584 112.0
BYD3_k127_620150_2 MacB-like periplasmic core domain - - - 0.00000000000000000000002538 106.0
BYD3_k127_620150_3 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000001406 57.0
BYD3_k127_6221895_0 Metalloenzyme superfamily K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 449.0
BYD3_k127_6221895_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 430.0
BYD3_k127_6221895_10 - K02172 - - 0.000000000000000000000000006474 121.0
BYD3_k127_6221895_11 Phosphohydrolase-associated domain K01129 - 3.1.5.1 0.00000000000000000000002845 102.0
BYD3_k127_6221895_12 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.0000000000000000000006244 109.0
BYD3_k127_6221895_13 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000005618 82.0
BYD3_k127_6221895_14 TonB C terminal - - - 0.0000000000002896 80.0
BYD3_k127_6221895_15 Outer membrane protein (OmpH-like) K06142 - - 0.000000001717 67.0
BYD3_k127_6221895_2 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002544 286.0
BYD3_k127_6221895_3 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008634 281.0
BYD3_k127_6221895_4 Udp N-acetylglucosamine O-acyltransferase; Domain 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002425 274.0
BYD3_k127_6221895_5 UbiA prenyltransferase family K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000002111 256.0
BYD3_k127_6221895_6 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000006694 259.0
BYD3_k127_6221895_7 Amidohydrolase family K20810 - 3.5.4.40 0.000000000000000000000000000000000000000000000000000000000186 218.0
BYD3_k127_6221895_8 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000002329 214.0
BYD3_k127_6221895_9 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K07081,K11782,K11784 - 1.21.98.1,4.2.1.151 0.0000000000000000000000000000000000000000000000003821 187.0
BYD3_k127_6228667_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 505.0
BYD3_k127_6228667_1 Protein of unknown function (DUF3738) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 386.0
BYD3_k127_6228667_10 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000002958 183.0
BYD3_k127_6228667_11 VWA-like domain (DUF2201) - - - 0.000000000000000000000000000000000000001226 156.0
BYD3_k127_6228667_12 - - - - 0.000000000000000000000000000000000000005124 160.0
BYD3_k127_6228667_13 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000008969 153.0
BYD3_k127_6228667_14 GGDEF domain - - - 0.000000000000000000000000003029 125.0
BYD3_k127_6228667_15 - - - - 0.000000000000000000001798 108.0
BYD3_k127_6228667_16 - - - - 0.0000000001366 65.0
BYD3_k127_6228667_18 Major facilitator Superfamily - - - 0.000002532 61.0
BYD3_k127_6228667_2 Carboxylesterase family K03929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 348.0
BYD3_k127_6228667_20 PFAM amino acid-binding ACT domain protein - - - 0.00009039 52.0
BYD3_k127_6228667_3 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 330.0
BYD3_k127_6228667_4 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 304.0
BYD3_k127_6228667_5 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001225 291.0
BYD3_k127_6228667_6 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000403 209.0
BYD3_k127_6228667_7 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000001353 211.0
BYD3_k127_6228667_9 AAA domain K02450 - - 0.0000000000000000000000000000000000000000000000006115 200.0
BYD3_k127_6244672_0 Belongs to the TelA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 316.0
BYD3_k127_6244672_1 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002164 279.0
BYD3_k127_6244672_2 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000003474 162.0
BYD3_k127_6244672_3 - K02172 - - 0.00000000000000000000000000000000000001608 156.0
BYD3_k127_6244672_4 Transcriptional regulator PadR family protein K10947 - - 0.00000000000000000000000000000004247 128.0
BYD3_k127_6244672_5 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000007747 137.0
BYD3_k127_6244672_6 Protein of unknown function (DUF3738) - - - 0.000000000000000000000000000004352 132.0
BYD3_k127_6244672_7 5-bromo-4-chloroindolyl phosphate hydrolysis protein - - - 0.0000000000000000000000000003132 126.0
BYD3_k127_6244672_8 Lipopolysaccharide biosynthesis protein - - - 0.000000000000000000000000002747 126.0
BYD3_k127_6244672_9 - - - - 0.0000000000000000003145 102.0
BYD3_k127_6271346_0 Dehydrogenase E1 component K11381 - 1.2.4.4 1.69e-266 843.0
BYD3_k127_6271346_1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 - 1.1.1.35 3.122e-232 741.0
BYD3_k127_6271346_10 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006651 407.0
BYD3_k127_6271346_11 NDP-hexose 23-dehydratase K16435 - 4.2.1.159 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 410.0
BYD3_k127_6271346_12 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005134 375.0
BYD3_k127_6271346_13 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 396.0
BYD3_k127_6271346_14 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006307 360.0
BYD3_k127_6271346_15 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009061 364.0
BYD3_k127_6271346_16 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 363.0
BYD3_k127_6271346_17 PFAM glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 323.0
BYD3_k127_6271346_18 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 327.0
BYD3_k127_6271346_19 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003377 316.0
BYD3_k127_6271346_2 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 507.0
BYD3_k127_6271346_20 Amidinotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008065 308.0
BYD3_k127_6271346_21 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 307.0
BYD3_k127_6271346_22 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003182 274.0
BYD3_k127_6271346_23 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000003943 267.0
BYD3_k127_6271346_24 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001464 252.0
BYD3_k127_6271346_25 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000002118 233.0
BYD3_k127_6271346_26 PFAM oxidoreductase domain protein K13327 - 1.1.1.384 0.00000000000000000000000000000000000000000000000000000000007343 215.0
BYD3_k127_6271346_27 Major Facilitator Superfamily K08223 - - 0.0000000000000000000000000000000000000000000000000006223 207.0
BYD3_k127_6271346_28 PFAM Rhomboid family - - - 0.0000000000000000000000000000000000000000000000009742 183.0
BYD3_k127_6271346_29 hydrolase of the alpha beta K07018 - - 0.0000000000000000000000000000000000000000001647 168.0
BYD3_k127_6271346_3 Belongs to the thiolase family K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 500.0
BYD3_k127_6271346_30 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000002003 152.0
BYD3_k127_6271346_31 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000002609 152.0
BYD3_k127_6271346_32 Yqey-like protein K09117 - - 0.00000000000000000000000000000000005654 138.0
BYD3_k127_6271346_33 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000007871 143.0
BYD3_k127_6271346_34 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.0000000000000000000000000000000002022 142.0
BYD3_k127_6271346_35 Reverse transcriptase-like - - - 0.00000000000000000000000000000000023 139.0
BYD3_k127_6271346_36 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000000004358 132.0
BYD3_k127_6271346_37 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000652 146.0
BYD3_k127_6271346_38 PFAM Cupin 2, conserved barrel - - - 0.000000000000000000000000000001945 127.0
BYD3_k127_6271346_39 WxcM-like, C-terminal - - - 0.00000000000000000000000000003442 123.0
BYD3_k127_6271346_4 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000881 498.0
BYD3_k127_6271346_40 ABC-2 family transporter protein - - - 0.00000000000000000000003283 111.0
BYD3_k127_6271346_41 transferase activity, transferring acyl groups - - - 0.0000000000000000004193 99.0
BYD3_k127_6271346_42 Serine aminopeptidase, S33 - - - 0.0000000000000009033 88.0
BYD3_k127_6271346_43 Essential cell division protein K03589 - - 0.0000000000001502 84.0
BYD3_k127_6271346_44 RES domain - - - 0.000000000005588 72.0
BYD3_k127_6271346_45 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic - - - 0.00000001639 62.0
BYD3_k127_6271346_46 - - - - 0.00004024 51.0
BYD3_k127_6271346_5 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 489.0
BYD3_k127_6271346_6 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005914 442.0
BYD3_k127_6271346_7 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008532 451.0
BYD3_k127_6271346_8 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 441.0
BYD3_k127_6271346_9 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 422.0
BYD3_k127_6307851_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 1.228e-221 697.0
BYD3_k127_6307851_1 metal-dependent hydrolase with the TIM-barrel fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 514.0
BYD3_k127_6307851_10 Protein of unknown function (DUF3014) - - - 0.000000000000000000000006731 112.0
BYD3_k127_6307851_11 Protein tyrosine kinase - - - 0.0000000000005658 76.0
BYD3_k127_6307851_12 - - - - 0.000007081 59.0
BYD3_k127_6307851_13 long-chain fatty acid transporting porin activity - - - 0.0004132 43.0
BYD3_k127_6307851_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000001095 236.0
BYD3_k127_6307851_3 response to abiotic stimulus K06867 - - 0.000000000000000000000000000000000000000000000000000000000008208 231.0
BYD3_k127_6307851_4 - - - - 0.00000000000000000000000000000000000000000000000000000000001284 218.0
BYD3_k127_6307851_5 glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000659 207.0
BYD3_k127_6307851_6 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000001734 188.0
BYD3_k127_6307851_7 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000000000000000000000000000000000000002223 162.0
BYD3_k127_6307851_8 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000006706 130.0
BYD3_k127_6307851_9 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000149 136.0
BYD3_k127_6311760_0 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006601 370.0
BYD3_k127_6311760_1 - K01286 - 3.4.16.4 0.00000000000000000000000000000000004523 149.0
BYD3_k127_6311760_2 Penicillinase repressor - - - 0.0000000000000000000001718 102.0
BYD3_k127_6311760_3 Sigma-70, region 4 K03088 - - 0.00000000000000001271 89.0
BYD3_k127_6319515_0 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 3.208e-268 848.0
BYD3_k127_6319515_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 471.0
BYD3_k127_6319515_2 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008194 359.0
BYD3_k127_6319515_3 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005093 320.0
BYD3_k127_6319515_4 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 294.0
BYD3_k127_6319515_5 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000002892 241.0
BYD3_k127_6319515_6 Antibiotic biosynthesis monooxygenase K11530 - 5.3.1.32 0.000000000000009225 78.0
BYD3_k127_6319515_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.000001591 59.0
BYD3_k127_6334312_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 542.0
BYD3_k127_6334312_1 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 503.0
BYD3_k127_6334312_10 involved in lipopolysaccharide - - - 0.000000000000000000000000000009365 118.0
BYD3_k127_6334312_11 - - - - 0.0000000000000000000000000004128 120.0
BYD3_k127_6334312_12 methyltransferase - - - 0.000000000000001806 85.0
BYD3_k127_6334312_13 Belongs to the peptidase S8 family - - - 0.000005836 59.0
BYD3_k127_6334312_14 Glycosyl transferase family 41 - - - 0.0000102 58.0
BYD3_k127_6334312_2 GDP-mannose 4,6 dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 469.0
BYD3_k127_6334312_3 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 416.0
BYD3_k127_6334312_4 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 412.0
BYD3_k127_6334312_5 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008301 383.0
BYD3_k127_6334312_6 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 362.0
BYD3_k127_6334312_7 Multidrug resistance protein MdtG - - - 0.000000000000000000000000000000000007201 152.0
BYD3_k127_6334312_8 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000002314 136.0
BYD3_k127_6334312_9 CDP-alcohol phosphatidyltransferase K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000000000000000000000000007321 128.0
BYD3_k127_6591337_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1372.0
BYD3_k127_6591337_1 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 2.62e-295 917.0
BYD3_k127_6591337_10 PFAM glycosyl transferase family 39 - - - 0.00000000000000000000000000000000000000000000000000000000000000001053 251.0
BYD3_k127_6591337_11 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000001292 239.0
BYD3_k127_6591337_12 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000001824 229.0
BYD3_k127_6591337_13 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000002792 198.0
BYD3_k127_6591337_14 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000005772 64.0
BYD3_k127_6591337_2 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008943 606.0
BYD3_k127_6591337_3 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 606.0
BYD3_k127_6591337_4 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003821 509.0
BYD3_k127_6591337_5 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00627 GO:0003674,GO:0003824,GO:0004742,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016407,GO:0016417,GO:0016418,GO:0016740,GO:0016746,GO:0016747,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030523,GO:0031405,GO:0031406,GO:0032787,GO:0032991,GO:0033293,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0046390,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1902494,GO:1990204 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 462.0
BYD3_k127_6591337_6 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 389.0
BYD3_k127_6591337_7 SMART Tetratricopeptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002404 303.0
BYD3_k127_6591337_8 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001239 282.0
BYD3_k127_6591337_9 uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000005071 250.0
BYD3_k127_6608714_0 WD40 repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 355.0
BYD3_k127_6608714_1 Glutathione peroxidase K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000006049 259.0
BYD3_k127_6608714_2 Dodecin - - - 0.000000000000000000003088 94.0
BYD3_k127_6608714_3 Lysin motif - - - 0.000000000000000000007513 96.0
BYD3_k127_6608714_4 - - - - 0.000000000008344 67.0
BYD3_k127_6625181_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 2.496e-209 672.0
BYD3_k127_6625181_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007347 437.0
BYD3_k127_6625181_10 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000008013 89.0
BYD3_k127_6625181_11 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000001879 64.0
BYD3_k127_6625181_12 - - - - 0.0006651 43.0
BYD3_k127_6625181_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 372.0
BYD3_k127_6625181_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007092 258.0
BYD3_k127_6625181_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000000001067 224.0
BYD3_k127_6625181_5 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000003632 185.0
BYD3_k127_6625181_6 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000003522 144.0
BYD3_k127_6625181_7 - - - - 0.0000000000000000000000000001032 120.0
BYD3_k127_6625181_8 Peptidase family M23 - - - 0.0000000000000000000004741 109.0
BYD3_k127_6625181_9 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000009085 84.0
BYD3_k127_6676180_0 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 461.0
BYD3_k127_6676180_1 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000004713 184.0
BYD3_k127_6676180_2 - - - - 0.00002208 56.0
BYD3_k127_671701_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000001876 164.0
BYD3_k127_6740266_0 peptidyl-tyrosine sulfation K01277 - 3.4.14.4 7.096e-287 895.0
BYD3_k127_6740266_1 Cystathionine beta-synthase K01697 - 4.2.1.22 1.456e-195 620.0
BYD3_k127_6740266_10 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.00000000000000000000000000000000000000000000000000000000006209 208.0
BYD3_k127_6740266_11 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000000000001591 214.0
BYD3_k127_6740266_12 Domain of unknown function (DUF4159) - - - 0.000000000000000000000000000000000000000000000000000000003388 208.0
BYD3_k127_6740266_13 Peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000000000006704 195.0
BYD3_k127_6740266_14 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000003524 171.0
BYD3_k127_6740266_15 oxidation-reduction process K09022 - 3.5.99.10 0.000000000000000000000000000000000000000001387 159.0
BYD3_k127_6740266_16 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000000000000000000000004447 157.0
BYD3_k127_6740266_17 YCII-related domain K09780 - - 0.0000000000000000000000000000000004376 138.0
BYD3_k127_6740266_18 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000004573 139.0
BYD3_k127_6740266_19 Domain of unknown function (DUF4252) - - - 0.000000000000000000000000000002511 132.0
BYD3_k127_6740266_2 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 609.0
BYD3_k127_6740266_20 Transcriptional regulator PadR-like family - - - 0.00000000000000000000005974 103.0
BYD3_k127_6740266_22 response to abiotic stimulus K06867 - - 0.000000000000989 76.0
BYD3_k127_6740266_23 YCII-related domain - - - 0.0000000001018 69.0
BYD3_k127_6740266_24 MacB-like periplasmic core domain - - - 0.0004241 52.0
BYD3_k127_6740266_25 ankyrin repeats K06867 - - 0.0005063 50.0
BYD3_k127_6740266_3 Putative glutamine amidotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007303 597.0
BYD3_k127_6740266_4 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 567.0
BYD3_k127_6740266_5 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 438.0
BYD3_k127_6740266_6 Aerotolerance regulator N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 310.0
BYD3_k127_6740266_7 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 291.0
BYD3_k127_6740266_8 Rossmann-like domain K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000001708 247.0
BYD3_k127_6740266_9 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000000000000000000000008868 221.0
BYD3_k127_6771004_0 Formylmethanofuran dehydrogenase subunit A K00200 GO:0003674,GO:0003824,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0044237,GO:0044281 1.2.7.12 1.332e-194 620.0
BYD3_k127_6771004_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 439.0
BYD3_k127_6771004_2 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 416.0
BYD3_k127_6771004_3 Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT) K00672 - 2.3.1.101 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007452 351.0
BYD3_k127_6771004_4 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000004431 180.0
BYD3_k127_6771004_5 formylmethanofuran dehydrogenase activity K00202 GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0044237,GO:0044281 1.2.7.12 0.000000000000000000000000000000000000000009321 164.0
BYD3_k127_6771004_6 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000001373 139.0
BYD3_k127_6771004_7 SWI complex, BAF60b domains - - - 0.0000000000000000000000000000000008497 134.0
BYD3_k127_6833130_0 - - - - 1.107e-220 689.0
BYD3_k127_6833130_1 - - - - 0.00000000000000000000009577 103.0
BYD3_k127_6865031_0 Alpha amylase, catalytic domain K00690,K05343 - 2.4.1.7,3.2.1.1,5.4.99.16 6.126e-200 636.0
BYD3_k127_6865031_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008438 517.0
BYD3_k127_6865031_2 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000001326 85.0
BYD3_k127_6893266_0 4Fe-4S dicluster domain K00184 - - 0.0 1136.0
BYD3_k127_6893266_1 ABC-type multidrug transport system ATPase and permease K06147 - - 6.937e-266 831.0
BYD3_k127_6893266_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 451.0
BYD3_k127_6893266_11 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004019 382.0
BYD3_k127_6893266_12 TLC ATP/ADP transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000935 398.0
BYD3_k127_6893266_13 chaperone-mediated protein folding K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 395.0
BYD3_k127_6893266_14 ATP:ADP antiporter activity K01932,K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009766 375.0
BYD3_k127_6893266_15 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009736 348.0
BYD3_k127_6893266_16 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004287 353.0
BYD3_k127_6893266_17 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 326.0
BYD3_k127_6893266_18 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006917 325.0
BYD3_k127_6893266_19 Sir2 family K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 314.0
BYD3_k127_6893266_2 ABC-type multidrug transport system ATPase and permease K06147,K06148 - - 3.512e-252 818.0
BYD3_k127_6893266_20 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005587 297.0
BYD3_k127_6893266_21 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 309.0
BYD3_k127_6893266_22 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007568 293.0
BYD3_k127_6893266_23 signal sequence binding K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007198 293.0
BYD3_k127_6893266_24 Cardiolipin synthetase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 299.0
BYD3_k127_6893266_25 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002053 270.0
BYD3_k127_6893266_26 - K02172 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002996 252.0
BYD3_k127_6893266_27 Haem-degrading - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004376 248.0
BYD3_k127_6893266_28 Protein of unknown function (DUF541) K09797 - - 0.000000000000000000000000000000000000000000000000000000000000000000001232 243.0
BYD3_k127_6893266_29 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000006071 237.0
BYD3_k127_6893266_3 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 3.82e-251 785.0
BYD3_k127_6893266_30 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000001627 237.0
BYD3_k127_6893266_31 - - - - 0.000000000000000000000000000000000000000000000000000000000000000002086 250.0
BYD3_k127_6893266_32 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000001173 231.0
BYD3_k127_6893266_33 - - - - 0.000000000000000000000000000000000000000000000000000000000000000111 232.0
BYD3_k127_6893266_34 TRAP transporter T-component - - - 0.00000000000000000000000000000000000000000000000000000000000004975 224.0
BYD3_k127_6893266_35 Protein of unknown function (DUF3341) - - - 0.0000000000000000000000000000000000000000000000000000000000159 230.0
BYD3_k127_6893266_36 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000002815 212.0
BYD3_k127_6893266_37 carbohydrate transport K11688,K21395 - - 0.000000000000000000000000000000000000000000000000000003917 203.0
BYD3_k127_6893266_38 Glyoxalase-like domain K07032 - - 0.000000000000000000000000000000000000000000000000000009307 201.0
BYD3_k127_6893266_39 Ankyrin repeats (many copies) - - - 0.0000000000000000000000000000000000000000000000000002181 210.0
BYD3_k127_6893266_4 cellulose binding - - - 1.964e-217 677.0
BYD3_k127_6893266_40 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000008624 202.0
BYD3_k127_6893266_41 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000002736 189.0
BYD3_k127_6893266_42 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000004655 162.0
BYD3_k127_6893266_43 Mo-molybdopterin cofactor metabolic process K03636,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000001721 151.0
BYD3_k127_6893266_44 rna polymerase sigma factor - - - 0.0000000000000000000000000000000000004179 154.0
BYD3_k127_6893266_45 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000071 154.0
BYD3_k127_6893266_46 Domain of unknown function (DUF4281) - - - 0.000000000000000000000000000000000001426 144.0
BYD3_k127_6893266_47 cytochrome C peroxidase - - - 0.00000000000000000000000000000005014 145.0
BYD3_k127_6893266_48 Regulator of nitric oxide reductase transcription K19339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000006167 129.0
BYD3_k127_6893266_49 Thioredoxin domain - - - 0.00000000000000000000000005189 112.0
BYD3_k127_6893266_5 Polysulphide reductase, NrfD K00185 - - 1.412e-208 666.0
BYD3_k127_6893266_50 Tetratricopeptide repeat - - - 0.00000000000000000000000283 120.0
BYD3_k127_6893266_51 PFAM YeeE YedE family (DUF395) K07112 - - 0.0000000000000000000003776 104.0
BYD3_k127_6893266_52 - - - - 0.000000000000000000001547 108.0
BYD3_k127_6893266_53 DinB superfamily - - - 0.000000000000000000004947 100.0
BYD3_k127_6893266_54 Sulphur transport K07112 - - 0.00000000000000000001774 102.0
BYD3_k127_6893266_55 TIGRFAM VWFA-related Acidobacterial domain - - - 0.00000000000000000002124 102.0
BYD3_k127_6893266_56 Surface antigen - - - 0.0000000000000000002148 104.0
BYD3_k127_6893266_58 TIGRFAM glutaredoxin-like domain protein - - - 0.00000000000000003821 83.0
BYD3_k127_6893266_59 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.00000000000000005691 93.0
BYD3_k127_6893266_6 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007136 586.0
BYD3_k127_6893266_60 Carboxypeptidase regulatory-like domain - - - 0.000000001319 68.0
BYD3_k127_6893266_61 PFAM FMN-binding domain K21559 - - 0.000000007406 66.0
BYD3_k127_6893266_62 - - - - 0.00000003761 66.0
BYD3_k127_6893266_63 Helix-hairpin-helix motif K02237 - - 0.000000101 61.0
BYD3_k127_6893266_64 Bacterial regulatory proteins, tetR family - - - 0.0001017 52.0
BYD3_k127_6893266_7 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 607.0
BYD3_k127_6893266_8 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007328 501.0
BYD3_k127_6893266_9 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009754 467.0
BYD3_k127_6900219_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 5e-324 1003.0
BYD3_k127_6900219_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 3.995e-275 877.0
BYD3_k127_6900219_10 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 544.0
BYD3_k127_6900219_11 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006159 535.0
BYD3_k127_6900219_12 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008736 518.0
BYD3_k127_6900219_13 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005106 511.0
BYD3_k127_6900219_14 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005643 485.0
BYD3_k127_6900219_15 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007127 485.0
BYD3_k127_6900219_16 Beta-Casp domain K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 467.0
BYD3_k127_6900219_17 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 462.0
BYD3_k127_6900219_18 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 449.0
BYD3_k127_6900219_19 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003277 430.0
BYD3_k127_6900219_2 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 1.116e-258 809.0
BYD3_k127_6900219_20 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 415.0
BYD3_k127_6900219_21 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 403.0
BYD3_k127_6900219_22 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 400.0
BYD3_k127_6900219_23 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 382.0
BYD3_k127_6900219_24 - K00262 - 1.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007972 388.0
BYD3_k127_6900219_25 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 343.0
BYD3_k127_6900219_26 PFAM Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 350.0
BYD3_k127_6900219_27 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 348.0
BYD3_k127_6900219_28 Belongs to the ABC transporter superfamily K02031,K02032,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009583 333.0
BYD3_k127_6900219_29 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000049,GO:0000154,GO:0001510,GO:0002935,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016426,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070040,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:0140102,GO:1901360,GO:1901363 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 336.0
BYD3_k127_6900219_3 peptidyl-tyrosine sulfation K01277 - 3.4.14.4 5.622e-257 819.0
BYD3_k127_6900219_30 ParB-like nuclease domain K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 331.0
BYD3_k127_6900219_31 Belongs to the ABC transporter superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008943 332.0
BYD3_k127_6900219_32 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 316.0
BYD3_k127_6900219_33 PFAM amino acid permease-associated region K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 324.0
BYD3_k127_6900219_34 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005593 323.0
BYD3_k127_6900219_35 UbiA prenyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002868 288.0
BYD3_k127_6900219_36 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002624 293.0
BYD3_k127_6900219_37 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000358 287.0
BYD3_k127_6900219_38 Predicted membrane protein (DUF2231) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000438 246.0
BYD3_k127_6900219_39 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001669 252.0
BYD3_k127_6900219_4 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 2.67e-229 739.0
BYD3_k127_6900219_40 Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000001957 233.0
BYD3_k127_6900219_41 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000006844 225.0
BYD3_k127_6900219_42 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000003399 230.0
BYD3_k127_6900219_43 KR domain K03793 - 1.5.1.33 0.0000000000000000000000000000000000000000004971 166.0
BYD3_k127_6900219_44 Probable zinc-ribbon domain - - - 0.00000000000000000000000000000000000000000293 157.0
BYD3_k127_6900219_45 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000005457 156.0
BYD3_k127_6900219_46 - - - - 0.0000000000000000000000000000000000001401 155.0
BYD3_k127_6900219_47 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000000000000004247 134.0
BYD3_k127_6900219_48 Belongs to the ompA family - - - 0.0000000000000000000000000000009 130.0
BYD3_k127_6900219_49 von Willebrand factor, type A - - - 0.000000000000000000000000000006904 134.0
BYD3_k127_6900219_5 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.353e-213 673.0
BYD3_k127_6900219_50 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000006734 107.0
BYD3_k127_6900219_51 BON domain - - - 0.00000000000000000000004915 109.0
BYD3_k127_6900219_52 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000003924 89.0
BYD3_k127_6900219_53 PAP2 superfamily - - - 0.00000000000000000909 94.0
BYD3_k127_6900219_54 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000969 93.0
BYD3_k127_6900219_55 Acetyltransferase (GNAT) family K01246 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008080,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0044424,GO:0044464 3.2.2.20 0.0000000000000002519 92.0
BYD3_k127_6900219_56 - - - - 0.0000000000006313 75.0
BYD3_k127_6900219_57 - - - - 0.0000000003988 61.0
BYD3_k127_6900219_58 Peptidase M56 - - - 0.000159 53.0
BYD3_k127_6900219_59 TonB dependent receptor - - - 0.0004577 53.0
BYD3_k127_6900219_6 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 1.739e-197 623.0
BYD3_k127_6900219_7 peptidase S9B dipeptidylpeptidase IV domain protein K01278 - 3.4.14.5 1.745e-196 638.0
BYD3_k127_6900219_8 Glutamine amidotransferases class-II K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 603.0
BYD3_k127_6900219_9 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 580.0
BYD3_k127_6934794_0 AIR synthase related protein, N-terminal domain K01008 - 2.7.9.3 4.397e-258 820.0
BYD3_k127_6934794_1 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005514 583.0
BYD3_k127_6934794_10 Involved in the tonB-independent uptake of proteins - - - 0.00000000002068 67.0
BYD3_k127_6934794_11 Protein kinase domain K12132 - 2.7.11.1 0.00000006065 59.0
BYD3_k127_6934794_12 - K09004 - - 0.00001096 55.0
BYD3_k127_6934794_13 aminopeptidase N - - - 0.0001033 54.0
BYD3_k127_6934794_2 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0090304,GO:0097056,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004478 529.0
BYD3_k127_6934794_3 Elongation factor SelB, winged helix K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 511.0
BYD3_k127_6934794_4 Formate dehydrogenase N, transmembrane K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 333.0
BYD3_k127_6934794_5 Cytochrome b/b6/petB K00127 - - 0.0000000000000000000000000000000000000000000000000000009202 215.0
BYD3_k127_6934794_6 - - - - 0.000000000000000000000000000000000000000000000000002631 195.0
BYD3_k127_6934794_7 protein involved in formate dehydrogenase formation K02380 - - 0.00000000000000000000000000000000000000002421 163.0
BYD3_k127_6934794_8 SMART extracellular solute-binding protein, family 3 K02030 - - 0.0000000000000000000000000842 118.0
BYD3_k127_6934794_9 - - - - 0.00000000002012 74.0
BYD3_k127_6957373_0 - - - - 0.000000000000000000000000479 123.0
BYD3_k127_6957373_1 sequence-specific DNA binding - - - 0.00000000000002428 87.0
BYD3_k127_695787_0 Dehydrogenase K00117 - 1.1.5.2 5.51e-225 715.0
BYD3_k127_695787_1 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004986 470.0
BYD3_k127_695787_3 NHL repeat - - - 0.00000000000000000000000000000000000006323 158.0
BYD3_k127_7031621_0 Pkd domain containing protein - - - 0.0000000000000002093 86.0
BYD3_k127_7031621_1 - - - - 0.000000000007587 74.0
BYD3_k127_7031621_2 Belongs to the peptidase A1 family - - - 0.0001277 49.0
BYD3_k127_717209_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006891 541.0
BYD3_k127_717209_1 2OG-Fe(II) oxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000005812 208.0
BYD3_k127_717209_2 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000001666 187.0
BYD3_k127_717209_3 - - - - 0.000000000000000000000000000000000000000000004629 172.0
BYD3_k127_717209_4 - - - - 0.00000000000000242 82.0
BYD3_k127_7174266_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 1.991e-220 718.0
BYD3_k127_7174266_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002439 276.0
BYD3_k127_7174266_2 Major Facilitator Superfamily - - - 0.0001907 45.0
BYD3_k127_7178996_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K22015 - 1.17.1.9,1.17.99.7 0.0 1437.0
BYD3_k127_7178996_1 Penicillin amidase K07116 - 3.5.1.97 1.034e-206 665.0
BYD3_k127_7178996_2 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 332.0
BYD3_k127_7178996_3 Phage integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005778 246.0
BYD3_k127_7178996_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000001614 130.0
BYD3_k127_7178996_5 Respiratory-chain NADH dehydrogenase 51 Kd subunit K00122,K00124,K00335 - 1.17.1.9,1.6.5.3 0.0000000008662 59.0
BYD3_k127_7178996_6 Domain of Unknown Function (DUF1206) - - - 0.000000002986 61.0
BYD3_k127_7193520_0 Glutamine synthetase type III K01915 - 6.3.1.2 4.993e-295 923.0
BYD3_k127_7193520_1 ABC transporter - - - 2.596e-257 803.0
BYD3_k127_7193520_10 Berberine and berberine like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 328.0
BYD3_k127_7193520_11 Domain of Unknown Function (DUF349) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 316.0
BYD3_k127_7193520_12 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001933 280.0
BYD3_k127_7193520_13 Tetratricopeptide repeat K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000005012 271.0
BYD3_k127_7193520_14 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002381 249.0
BYD3_k127_7193520_15 - - - - 0.0000000000000000000000000000000000000000000000000000000000000817 230.0
BYD3_k127_7193520_16 Surface antigen K07277,K09800 - - 0.0000000000000000000000000000000000000000000000009215 202.0
BYD3_k127_7193520_17 ApaG domain K06195 - - 0.000000000000000000000000000000000000000000003291 167.0
BYD3_k127_7193520_18 DinB family - - - 0.00000000000000000000000000000000005152 140.0
BYD3_k127_7193520_19 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000000000000000000000008377 113.0
BYD3_k127_7193520_2 ABC transporter transmembrane region K11085 - - 4.332e-246 776.0
BYD3_k127_7193520_20 - - - - 0.00000000000111 75.0
BYD3_k127_7193520_21 Ester cyclase - - - 0.00000002506 61.0
BYD3_k127_7193520_23 Protein of unknown function (DUF533) - - - 0.00001374 56.0
BYD3_k127_7193520_24 Acetyltransferase (GNAT) family - - - 0.00006128 52.0
BYD3_k127_7193520_25 DNA-templated transcription, initiation K03088 - - 0.0002518 51.0
BYD3_k127_7193520_3 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 2.636e-226 716.0
BYD3_k127_7193520_4 glutamine synthetase K01915 - 6.3.1.2 1.136e-216 688.0
BYD3_k127_7193520_5 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 459.0
BYD3_k127_7193520_6 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000795 458.0
BYD3_k127_7193520_7 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 410.0
BYD3_k127_7193520_8 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 414.0
BYD3_k127_7193520_9 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 424.0
BYD3_k127_7201938_0 TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 554.0
BYD3_k127_7201938_1 FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 482.0
BYD3_k127_7201938_2 PepSY-associated TM region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 306.0
BYD3_k127_7201938_3 PepSY-associated TM region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006728 254.0
BYD3_k127_7201938_4 Putative restriction endonuclease - - - 0.0000000000000005251 88.0
BYD3_k127_7201938_5 Transcriptional regulator PadR-like family - - - 0.00000000002385 64.0
BYD3_k127_7218235_0 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 2.456e-244 763.0
BYD3_k127_7218235_1 proline dipeptidase activity - - - 3.787e-211 665.0
BYD3_k127_7218235_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K21417 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 464.0
BYD3_k127_7218235_3 PFAM dehydrogenase E1 component K21416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008611 434.0
BYD3_k127_7218235_4 major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 398.0
BYD3_k127_7218235_5 DnaB-like helicase N terminal domain K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 363.0
BYD3_k127_7218235_6 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 297.0
BYD3_k127_7218235_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000009647 166.0
BYD3_k127_7218235_8 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00059,K19550 - 1.1.1.100 0.00000000000000000000000000000000000004176 153.0
BYD3_k127_7218235_9 23S rRNA-intervening sequence protein - - - 0.00000000000000271 90.0
BYD3_k127_7225096_0 copper-translocating P-type ATPase K17686 - 3.6.3.54 5.581e-316 987.0
BYD3_k127_7225096_1 Dehydrogenase K00117 - 1.1.5.2 4.144e-272 852.0
BYD3_k127_7225096_10 Regulatory protein, FmdB family - - - 0.0000000000000001115 84.0
BYD3_k127_7225096_11 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000006977 73.0
BYD3_k127_7225096_12 - - - - 0.0000000000006846 74.0
BYD3_k127_7225096_2 GTP-binding protein TypA K06207 - - 7.601e-266 833.0
BYD3_k127_7225096_3 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 440.0
BYD3_k127_7225096_4 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001399 258.0
BYD3_k127_7225096_5 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009729 252.0
BYD3_k127_7225096_6 metal-binding protein - - - 0.0000000000000000000000000000000000000000001433 163.0
BYD3_k127_7225096_7 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000003481 156.0
BYD3_k127_7225096_8 SNARE associated Golgi protein - - - 0.00000000000000000000002397 107.0
BYD3_k127_7225096_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000005292 96.0
BYD3_k127_7239448_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0005506,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0008198,GO:0009060,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0015980,GO:0016020,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0030312,GO:0030350,GO:0032787,GO:0040007,GO:0042221,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046459,GO:0046872,GO:0046914,GO:0047456,GO:0048037,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 0.0 1145.0
BYD3_k127_7239448_1 Peptidase family M49 - - - 4.299e-239 762.0
BYD3_k127_7239448_10 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000000000000000000003746 205.0
BYD3_k127_7239448_11 PFAM AMMECR1 domain protein K09141 - - 0.000000000000000000000000000000000000000002003 161.0
BYD3_k127_7239448_12 S1 P1 Nuclease - - - 0.000000000000000000000000000000000784 141.0
BYD3_k127_7239448_13 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000006189 124.0
BYD3_k127_7239448_15 Belongs to the peptidase M10A family K08002,K08006 - - 0.00000000003138 75.0
BYD3_k127_7239448_16 - - - - 0.0000000009279 72.0
BYD3_k127_7239448_17 - - - - 0.00000000885 67.0
BYD3_k127_7239448_2 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 346.0
BYD3_k127_7239448_3 antibiotic catabolic process K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 331.0
BYD3_k127_7239448_4 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 314.0
BYD3_k127_7239448_5 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 302.0
BYD3_k127_7239448_6 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 323.0
BYD3_k127_7239448_7 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 291.0
BYD3_k127_7239448_8 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009439 302.0
BYD3_k127_7239448_9 Memo-like protein K06990 - - 0.0000000000000000000000000000000000000000000000000000000001067 213.0
BYD3_k127_7247822_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006566 478.0
BYD3_k127_7247822_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004411 424.0
BYD3_k127_7247822_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 364.0
BYD3_k127_7247822_3 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 334.0
BYD3_k127_7247822_4 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008691 285.0
BYD3_k127_7247822_5 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000003884 216.0
BYD3_k127_7247822_6 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000953 202.0
BYD3_k127_7247822_7 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000000000003263 155.0
BYD3_k127_7262064_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 1.008e-248 788.0
BYD3_k127_7262064_1 FAD linked oxidases, C-terminal domain - - - 3.241e-203 653.0
BYD3_k127_7262064_10 - - - - 0.00000000000000000000000000000000009187 138.0
BYD3_k127_7262064_11 TonB-dependent receptor - - - 0.00000000001021 79.0
BYD3_k127_7262064_12 Involved in the tonB-independent uptake of proteins K12132 - 2.7.11.1 0.0000000001828 72.0
BYD3_k127_7262064_13 O-linked N-acetylglucosamine transferase, SPINDLY family - - - 0.00000001024 69.0
BYD3_k127_7262064_2 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 574.0
BYD3_k127_7262064_3 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 524.0
BYD3_k127_7262064_4 Dicarboxylate carrier MatC domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005828 364.0
BYD3_k127_7262064_5 Lytic murein transglycosylase K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000245 280.0
BYD3_k127_7262064_6 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000114 231.0
BYD3_k127_7262064_7 TonB-dependent receptor - - - 0.00000000000000000000000000000000000001085 168.0
BYD3_k127_7262064_9 - - - - 0.000000000000000000000000000000000008086 146.0
BYD3_k127_7270052_0 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 417.0
BYD3_k127_7270052_1 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 363.0
BYD3_k127_729909_0 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase K03606 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 423.0
BYD3_k127_729909_1 - - - - 0.0000000000000000000000000000000000000000000007813 176.0
BYD3_k127_729909_2 PFAM acyl-coA-binding protein, ACBP - - - 0.00000000000000000000000000004068 121.0
BYD3_k127_729909_3 Fibronectin type 3 domain - - - 0.0000005968 56.0
BYD3_k127_729909_4 Peptidase M60-like family K21429 - - 0.00004683 51.0
BYD3_k127_729909_5 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.0009289 51.0
BYD3_k127_7300529_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000009405 219.0
BYD3_k127_7300529_1 Belongs to the ClpA ClpB family K03696 - - 0.00000000000000000000000000000000000000000000000001571 186.0
BYD3_k127_7300529_2 COG0714 MoxR-like ATPases K03924 - - 0.00000000000000000000000000000000001844 143.0
BYD3_k127_7300529_3 Protein of unknown function DUF58 - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00000000000000008123 91.0
BYD3_k127_7300529_4 PFAM von Willebrand factor type A K07114 - - 0.000000000000002704 88.0
BYD3_k127_7300529_5 von Willebrand factor type A domain K07114 - - 0.0000000005034 71.0
BYD3_k127_7316317_0 TonB-dependent Receptor Plug Domain - - - 2.871e-296 946.0
BYD3_k127_7316317_1 PFAM DeoC LacD family aldolase K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 531.0
BYD3_k127_7316317_10 response regulator K02481,K07715 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005574 388.0
BYD3_k127_7316317_11 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 385.0
BYD3_k127_7316317_12 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 379.0
BYD3_k127_7316317_13 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007748 377.0
BYD3_k127_7316317_14 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 381.0
BYD3_k127_7316317_15 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 354.0
BYD3_k127_7316317_16 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009991 350.0
BYD3_k127_7316317_17 PFAM peptidase S58, DmpA K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 321.0
BYD3_k127_7316317_18 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 325.0
BYD3_k127_7316317_19 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 310.0
BYD3_k127_7316317_2 Peptidase dimerisation domain K01436,K01438,K01439 - 3.5.1.16,3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006484 533.0
BYD3_k127_7316317_20 PA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 313.0
BYD3_k127_7316317_21 FES K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 297.0
BYD3_k127_7316317_22 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003591 306.0
BYD3_k127_7316317_23 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009227 282.0
BYD3_k127_7316317_24 dithiol-disulfide isomerase involved in polyketide biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001117 250.0
BYD3_k127_7316317_25 squalene-associated FAD-dependent desaturase K21677 - 1.17.8.1 0.000000000000000000000000000000000000000000000000000000000000000000186 246.0
BYD3_k127_7316317_26 synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000002437 238.0
BYD3_k127_7316317_27 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000002923 241.0
BYD3_k127_7316317_28 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000001117 224.0
BYD3_k127_7316317_29 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000002716 227.0
BYD3_k127_7316317_3 Isocitrate/isopropylmalate dehydrogenase K07246 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003862,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006108,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009027,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0019752,GO:0036094,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046553,GO:0046872,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.83,1.1.1.93,4.1.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 510.0
BYD3_k127_7316317_30 NUDIX domain K00077,K01092,K03574,K03795 - 1.1.1.169,3.1.3.25,3.6.1.55,4.99.1.3 0.00000000000000000000000000000000000000000000000000008949 193.0
BYD3_k127_7316317_31 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000002173 190.0
BYD3_k127_7316317_32 PFAM Radical SAM domain protein K06871 - - 0.000000000000000000000000000000000000000000000000000447 202.0
BYD3_k127_7316317_33 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000448 196.0
BYD3_k127_7316317_34 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000001879 193.0
BYD3_k127_7316317_35 phosphatidylcholine synthase activity K01004,K17103 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050520,GO:0071704,GO:0090407,GO:1901576 2.7.8.24,2.7.8.8 0.00000000000000000000000000000000000000000000000005848 191.0
BYD3_k127_7316317_36 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01838 - 5.4.2.6 0.0000000000000000000000000000000000000000000004233 175.0
BYD3_k127_7316317_37 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000007108 181.0
BYD3_k127_7316317_38 peptide deformylase activity K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.000000000000000000000000000000000000000000203 165.0
BYD3_k127_7316317_39 PFAM glycine cleavage T protein (aminomethyl transferase) K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000663 171.0
BYD3_k127_7316317_4 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 474.0
BYD3_k127_7316317_40 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000002026 158.0
BYD3_k127_7316317_41 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000018 148.0
BYD3_k127_7316317_42 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000001175 135.0
BYD3_k127_7316317_43 thiolester hydrolase activity K06889 - - 0.000000000000000000000000004502 127.0
BYD3_k127_7316317_44 - - - - 0.0000000000000000000000007279 106.0
BYD3_k127_7316317_45 NUDIX domain K03574,K03575 - 3.6.1.55 0.000000000000000000000001652 109.0
BYD3_k127_7316317_46 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000002972 92.0
BYD3_k127_7316317_47 Forkhead associated domain - - - 0.00000000000002755 76.0
BYD3_k127_7316317_48 - - - - 0.000000000002361 80.0
BYD3_k127_7316317_49 RESPONSE REGULATOR receiver - - - 0.00000000002536 74.0
BYD3_k127_7316317_5 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 454.0
BYD3_k127_7316317_6 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 436.0
BYD3_k127_7316317_7 e3 binding domain K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 405.0
BYD3_k127_7316317_8 symporter activity K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 404.0
BYD3_k127_7316317_9 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 404.0
BYD3_k127_7316989_0 MacB-like periplasmic core domain - - - 3.91e-235 751.0
BYD3_k127_7316989_1 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000002254 153.0
BYD3_k127_7319253_0 PFAM 4-hydroxyphenylacetate 3-hydroxylase K00483 - 1.14.14.9 2.646e-261 824.0
BYD3_k127_7319253_1 asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004811 599.0
BYD3_k127_7319253_10 - - - - 0.0000002977 62.0
BYD3_k127_7319253_11 VWA domain containing CoxE-like protein - - - 0.0006116 51.0
BYD3_k127_7319253_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K00446 - 1.13.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009126 519.0
BYD3_k127_7319253_3 geranylgeranyl reductase activity K14257 - 1.14.19.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 513.0
BYD3_k127_7319253_4 carboxylic ester hydrolase activity K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006917 445.0
BYD3_k127_7319253_5 peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 393.0
BYD3_k127_7319253_6 Elongator protein 3, MiaB family, Radical SAM K06936 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 351.0
BYD3_k127_7319253_7 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000009047 229.0
BYD3_k127_7319253_8 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000238 218.0
BYD3_k127_7319253_9 Cytochrome c - - - 0.00000000000000000000000000000009819 126.0
BYD3_k127_7332191_0 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 469.0
BYD3_k127_7332191_1 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 458.0
BYD3_k127_7332191_10 Sugar (and other) transporter - - - 0.0000002875 54.0
BYD3_k127_7332191_11 TonB-dependent Receptor Plug Domain - - - 0.000001229 61.0
BYD3_k127_7332191_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006558 461.0
BYD3_k127_7332191_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 288.0
BYD3_k127_7332191_4 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000183 278.0
BYD3_k127_7332191_5 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003586 266.0
BYD3_k127_7332191_6 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000000000000000000008867 182.0
BYD3_k127_7332191_7 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000002315 173.0
BYD3_k127_7332191_8 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000005159 96.0
BYD3_k127_7332191_9 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000009802 92.0
BYD3_k127_7349917_0 region 4 type 2 - - - 0.00000000000000000000000000000000000000000000000000000000002332 226.0
BYD3_k127_7349917_1 - - - - 0.000000000000000000000000001759 126.0
BYD3_k127_7349917_2 - - - - 0.00000000000005019 76.0
BYD3_k127_7349917_3 ABC transporter - - - 0.0000000004917 64.0
BYD3_k127_7353070_0 peptidase - - - 1.161e-224 709.0
BYD3_k127_7353070_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 458.0
BYD3_k127_7353070_10 glyoxalase III activity - - - 0.00000000000000000000000000000000000000000002228 168.0
BYD3_k127_7353070_11 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000001071 158.0
BYD3_k127_7353070_12 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000004618 151.0
BYD3_k127_7353070_13 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759,K05606 - 4.4.1.5,5.1.99.1 0.00000000000000000000000000000000009474 148.0
BYD3_k127_7353070_14 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000002334 128.0
BYD3_k127_7353070_15 von Willebrand factor, type A - - - 0.00000000000000000000000001322 124.0
BYD3_k127_7353070_16 - - - - 0.00000000000000000000001033 114.0
BYD3_k127_7353070_17 protein conserved in cyanobacteria - - - 0.00000000000000000001371 108.0
BYD3_k127_7353070_18 - - - - 0.00000000000000001312 88.0
BYD3_k127_7353070_19 Transposase - - - 0.00000000000005675 74.0
BYD3_k127_7353070_2 COG0524 Sugar kinases, ribokinase family K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 415.0
BYD3_k127_7353070_20 Predicted membrane protein (DUF2085) - - - 0.000000005748 63.0
BYD3_k127_7353070_21 - - - - 0.00000415 51.0
BYD3_k127_7353070_22 TM2 domain - - - 0.0000139 52.0
BYD3_k127_7353070_23 - - - - 0.000042 52.0
BYD3_k127_7353070_24 PFAM NHL repeat containing protein - - - 0.0002712 53.0
BYD3_k127_7353070_25 PFAM Ig domain protein, group 2 domain protein - - - 0.0009024 51.0
BYD3_k127_7353070_3 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 403.0
BYD3_k127_7353070_4 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 425.0
BYD3_k127_7353070_5 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007863 361.0
BYD3_k127_7353070_6 GTPase activity K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 305.0
BYD3_k127_7353070_7 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000105 291.0
BYD3_k127_7353070_8 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000347 241.0
BYD3_k127_7353070_9 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000003904 198.0
BYD3_k127_735750_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003335 248.0
BYD3_k127_735750_1 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000005414 193.0
BYD3_k127_735750_2 - - - - 0.0000000000000000000001412 104.0
BYD3_k127_735750_3 - - - - 0.000000000000000000003496 106.0
BYD3_k127_735750_4 - - - - 0.00001359 54.0
BYD3_k127_735942_0 Carboxypeptidase regulatory-like domain - - - 1.341e-217 714.0
BYD3_k127_735942_1 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000132 199.0
BYD3_k127_735942_2 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000001428 173.0
BYD3_k127_735942_3 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.00000000000000000000000000002954 119.0
BYD3_k127_7361640_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1172.0
BYD3_k127_7361640_1 C-terminus of AA_permease K03294 - - 4.32e-213 672.0
BYD3_k127_7361640_10 STAS domain - - - 0.0009021 50.0
BYD3_k127_7361640_2 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 522.0
BYD3_k127_7361640_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003895 372.0
BYD3_k127_7361640_4 UDP-3-O-acyl N-acetylglycosamine deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 294.0
BYD3_k127_7361640_5 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008076 268.0
BYD3_k127_7361640_6 HNH nucleases - - - 0.0000000000000000000000000000000000000000000000000000000000000000001662 233.0
BYD3_k127_7361640_7 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000004675 170.0
BYD3_k127_7361640_8 thymidylate kinase K00943 GO:0003674,GO:0003824,GO:0004550,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006165,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000132 128.0
BYD3_k127_7361640_9 competence protein - - - 0.0000000003843 64.0
BYD3_k127_7366874_0 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 457.0
BYD3_k127_7366874_1 - - - - 0.00000000000000000000000000000000000008385 156.0
BYD3_k127_7366874_2 Protein of unknown function (DUF1552) - - - 0.0000008322 52.0
BYD3_k127_737452_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1568.0
BYD3_k127_737452_1 xanthine dehydrogenase activity - - - 0.0 1143.0
BYD3_k127_737452_10 enterobactin catabolic process K07214,K09689 - 3.6.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 492.0
BYD3_k127_737452_11 SMART Integrin alpha beta-propellor repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 421.0
BYD3_k127_737452_12 TIGRFAM molybdenum cofactor synthesis domain K03750,K07219 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0032324,GO:0034641,GO:0036211,GO:0042040,GO:0042278,GO:0043170,GO:0043412,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0061599,GO:0070566,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 392.0
BYD3_k127_737452_13 PFAM amidohydrolase 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 385.0
BYD3_k127_737452_14 Response regulator receiver K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007744 379.0
BYD3_k127_737452_15 PFAM Haloacid dehalogenase domain protein hydrolase K07025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 343.0
BYD3_k127_737452_16 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 338.0
BYD3_k127_737452_17 cytochrome - - - 0.00000000000000000000000000000000000000000000000000000000000000000003588 248.0
BYD3_k127_737452_18 ribosylpyrimidine nucleosidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000001355 249.0
BYD3_k127_737452_19 - - - - 0.0000000000000000000000000000000000000000000000000000000000005827 218.0
BYD3_k127_737452_2 Protein of unknown function (DUF1595) - - - 3.045e-295 941.0
BYD3_k127_737452_20 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000005763 194.0
BYD3_k127_737452_21 2Fe-2S -binding domain protein K18029 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016491,GO:0016725,GO:0019439,GO:0044237,GO:0044248,GO:0055114 1.17.2.1 0.00000000000000000000000000000000000000000000000001004 190.0
BYD3_k127_737452_22 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000001198 165.0
BYD3_k127_737452_23 - - - - 0.00000000000000000000000000007532 120.0
BYD3_k127_737452_24 Ankyrin repeat - - - 0.000000000000000000000000002289 129.0
BYD3_k127_737452_25 - - - - 0.00000000000000000000000001776 119.0
BYD3_k127_737452_26 cheY-homologous receiver domain - - - 0.0000000000000000000000008466 115.0
BYD3_k127_737452_28 DUF1626 domain containing protein - - - 0.000000000000000000001978 98.0
BYD3_k127_737452_29 Phosphoglycerate mutase family K15634 - 5.4.2.12 0.000000000000000000004548 102.0
BYD3_k127_737452_3 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 3.987e-285 885.0
BYD3_k127_737452_30 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000003552 81.0
BYD3_k127_737452_31 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000748 75.0
BYD3_k127_737452_32 SnoaL-like domain - - - 0.0000000001333 68.0
BYD3_k127_737452_34 PFAM regulator of chromosome condensation, RCC1 - - - 0.0000001032 61.0
BYD3_k127_737452_35 membrane - - - 0.0000001761 63.0
BYD3_k127_737452_36 CsbD-like - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000002709 52.0
BYD3_k127_737452_37 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00004045 52.0
BYD3_k127_737452_38 serine threonine protein kinase - - - 0.00008387 54.0
BYD3_k127_737452_39 energy transducer activity K03832 - - 0.0001223 53.0
BYD3_k127_737452_4 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 4.595e-262 818.0
BYD3_k127_737452_40 PFAM IstB domain protein ATP-binding protein - - - 0.0002366 51.0
BYD3_k127_737452_41 OmpA family - - - 0.0004856 52.0
BYD3_k127_737452_5 LVIVD repeat - - - 2.761e-231 722.0
BYD3_k127_737452_6 Protein of unknown function (DUF1552) - - - 5.348e-215 679.0
BYD3_k127_737452_7 DNA topological change K03168 - 5.99.1.2 6.179e-212 693.0
BYD3_k127_737452_8 KaiC K08482 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 526.0
BYD3_k127_737452_9 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005556 496.0
BYD3_k127_7384226_0 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000672 295.0
BYD3_k127_7384226_2 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002243 246.0
BYD3_k127_7384226_3 Peptidase MA superfamily - - - 0.000000000000000000000000000000000007167 151.0
BYD3_k127_7384226_4 - - - - 0.00000000000003187 78.0
BYD3_k127_7384226_5 - - - - 0.00006177 53.0
BYD3_k127_745934_0 COG0542 ATPases with chaperone activity, ATP-binding subunit K11907 - - 0.0 1293.0
BYD3_k127_745934_1 type VI secretion protein K11900 - - 9.596e-293 902.0
BYD3_k127_745934_10 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 293.0
BYD3_k127_745934_11 type VI secretion-associated protein, BMA_A0400 family K11890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005175 304.0
BYD3_k127_745934_12 TIGRFAM Type VI secretion system, FHA K11913 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007994 258.0
BYD3_k127_745934_13 TIGRFAM type VI secretion system lysozyme-related protein K11897 - - 0.00000000000000000000000000000000000000000000000000000000000004556 218.0
BYD3_k127_745934_14 ImpA, N-terminal, type VI secretion system K11902 - - 0.00000000000000000000000000000000000000000000000003206 191.0
BYD3_k127_745934_15 Type VI secretion system effector, Hcp K11903 - - 0.00000000000000000000000000000000000000000000000008274 183.0
BYD3_k127_745934_16 Type VI secretion system effector, Hcp K11903 - - 0.00000000000000000000000000000000000000000000000008556 181.0
BYD3_k127_745934_17 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 K11906 - - 0.000000000000000000000000006285 115.0
BYD3_k127_745934_2 ImcF-related N-terminal domain K11891 - - 5.945e-291 930.0
BYD3_k127_745934_3 Type VI secretion protein K11896 - - 1.609e-261 828.0
BYD3_k127_745934_4 rhs element vgr protein K11904 - - 6.094e-224 709.0
BYD3_k127_745934_5 type VI secretion protein K11893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 482.0
BYD3_k127_745934_6 Type IV VI secretion system protein, DotU family K11892 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 394.0
BYD3_k127_745934_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009664 415.0
BYD3_k127_745934_8 Virulence protein SciE type K11898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 358.0
BYD3_k127_745934_9 Pfam:T6SS_VasB K11895 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 355.0
BYD3_k127_7480265_0 DNA topological change K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 491.0
BYD3_k127_7480265_1 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000562 379.0
BYD3_k127_7480265_2 Cytochrome c K00406,K12263 - - 0.0005482 53.0
BYD3_k127_7481491_0 PFAM Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K00122 - 1.17.1.9 1.003e-258 816.0
BYD3_k127_7481491_1 PQQ-like domain K00114 - 1.1.2.8 1.306e-239 753.0
BYD3_k127_7481491_10 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075 321.0
BYD3_k127_7481491_11 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 303.0
BYD3_k127_7481491_12 ABC transporter K02049,K15578,K15579 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005211 287.0
BYD3_k127_7481491_13 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000671 271.0
BYD3_k127_7481491_14 Extradiol ring-cleavage dioxygenase class III protein subunit B K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001011 270.0
BYD3_k127_7481491_15 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000007215 246.0
BYD3_k127_7481491_16 - K06862 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003141 244.0
BYD3_k127_7481491_17 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000002627 259.0
BYD3_k127_7481491_18 Uncharacterized protein conserved in bacteria (DUF2272) - - - 0.00000000000000000000000000000000000000000000000000000000000000000009497 243.0
BYD3_k127_7481491_19 TIGRFAM nitrate ABC transporter, ATPase subunits C and D K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000002212 237.0
BYD3_k127_7481491_2 PFAM WD domain, G-beta repeat - - - 1.483e-231 764.0
BYD3_k127_7481491_20 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000006005 228.0
BYD3_k127_7481491_21 Binding-protein-dependent transport system inner membrane component K15577 - - 0.0000000000000000000000000000000000000000000000000000000004969 203.0
BYD3_k127_7481491_22 protein possibly involved in utilization of glycolate and propanediol - - - 0.00000000000000000000000000000000000009353 147.0
BYD3_k127_7481491_23 - - - - 0.0000000000000000000000000000000006317 147.0
BYD3_k127_7481491_24 Hemerythrin hhe cation binding - - - 0.00000000000000000000000000000000652 136.0
BYD3_k127_7481491_25 - - - - 0.00000000000000000000000003027 123.0
BYD3_k127_7481491_27 NmrA-like family K19267 - 1.6.5.2 0.000000000000000000003261 97.0
BYD3_k127_7481491_28 sequence-specific DNA binding - - - 0.0000000000000007293 93.0
BYD3_k127_7481491_3 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 1.742e-205 657.0
BYD3_k127_7481491_31 Protein conserved in bacteria - - - 0.00005287 50.0
BYD3_k127_7481491_32 PFAM SMP-30 Gluconolaconase - - - 0.000185 54.0
BYD3_k127_7481491_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 610.0
BYD3_k127_7481491_5 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 558.0
BYD3_k127_7481491_6 Acetyl-coenzyme A transporter 1 K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009509 545.0
BYD3_k127_7481491_7 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009513 456.0
BYD3_k127_7481491_8 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 447.0
BYD3_k127_7481491_9 Wd40 repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 393.0
BYD3_k127_7519960_0 ABC transporter K15738 - - 1.591e-210 671.0
BYD3_k127_7519960_1 DNA helicase K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 494.0
BYD3_k127_7519960_2 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 490.0
BYD3_k127_7519960_3 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000112 263.0
BYD3_k127_7519960_4 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000004366 261.0
BYD3_k127_7519960_5 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000002559 212.0
BYD3_k127_7519960_6 Cytochrome c mono- and diheme variants - - - 0.000000000000000000000000000004745 127.0
BYD3_k127_7519960_7 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000004606 97.0
BYD3_k127_7519960_8 Domain of unknown function (DUF4399) - - - 0.0000000000002658 76.0
BYD3_k127_7519960_9 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.0005513 51.0
BYD3_k127_7556337_0 PQQ enzyme repeat - - - 4.603e-204 658.0
BYD3_k127_7556337_1 von Willebrand factor, type A - - - 0.00000000000000000000000000007728 130.0
BYD3_k127_7556337_3 DinB superfamily - - - 0.0000000000000000008201 88.0
BYD3_k127_7556337_4 - - - - 0.000000008114 61.0
BYD3_k127_7556337_5 - - - - 0.00003041 58.0
BYD3_k127_7556337_6 oxidoreductase activity - - - 0.0001218 56.0
BYD3_k127_7572334_0 alcohol dehydrogenase K00121 - 1.1.1.1,1.1.1.284 0.000000000000000000000000000000000000000000000000000367 201.0
BYD3_k127_7572334_1 - - - - 0.0000000000000000000000000000000000000000001742 162.0
BYD3_k127_7572334_2 - - - - 0.0000000000000000000000000000000000000000974 156.0
BYD3_k127_7572334_3 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.0000000000000007404 82.0
BYD3_k127_7572334_4 TIR domain - - - 0.000000000000009205 87.0
BYD3_k127_7584608_0 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 550.0
BYD3_k127_7584608_1 Ribonuclease E/G family K08300,K08301 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 497.0
BYD3_k127_7584608_10 peptidoglycan glycosyltransferase activity K05837 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008360,GO:0016020,GO:0022603,GO:0022604,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 298.0
BYD3_k127_7584608_11 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009466 293.0
BYD3_k127_7584608_12 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002605 244.0
BYD3_k127_7584608_13 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000499 257.0
BYD3_k127_7584608_14 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000002223 219.0
BYD3_k127_7584608_15 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.00000000000000000000000000000000000000000000000000000000749 228.0
BYD3_k127_7584608_16 peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000008375 196.0
BYD3_k127_7584608_17 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000003217 195.0
BYD3_k127_7584608_18 energy transducer activity K03832 - - 0.00000000000000000000000000000000000000000000002047 194.0
BYD3_k127_7584608_19 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.0000000000000000000000000000000000000000002787 166.0
BYD3_k127_7584608_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 424.0
BYD3_k127_7584608_20 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000417 168.0
BYD3_k127_7584608_21 NUDIX domain - - - 0.0000000000000000000000000000000000000007447 153.0
BYD3_k127_7584608_22 rod shape-determining protein MreC K03570 - - 0.0000000000000000000000000000000000001092 153.0
BYD3_k127_7584608_23 Penicillinase repressor - - - 0.0000000000000000000000000000000001716 138.0
BYD3_k127_7584608_24 peroxiredoxin activity K03564 - 1.11.1.15 0.0000000000000000000000000000000001911 141.0
BYD3_k127_7584608_25 - K02172 - - 0.00000000000000000000000000001585 128.0
BYD3_k127_7584608_26 Putative adhesin - - - 0.0000000000000000000000000002183 132.0
BYD3_k127_7584608_27 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000004301 114.0
BYD3_k127_7584608_28 lyase activity - - - 0.00000000000000008685 95.0
BYD3_k127_7584608_29 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000003438 84.0
BYD3_k127_7584608_3 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate K00756 GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009032,GO:0016740,GO:0016757,GO:0016758,GO:0016763,GO:0044424,GO:0044444,GO:0044464 2.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008116 432.0
BYD3_k127_7584608_30 - - - - 0.0000002727 61.0
BYD3_k127_7584608_32 shape-determining protein MreD K03571 - - 0.0001542 50.0
BYD3_k127_7584608_33 Outer membrane protein beta-barrel domain - - - 0.0009509 49.0
BYD3_k127_7584608_4 Na dependent nucleoside K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 416.0
BYD3_k127_7584608_5 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 411.0
BYD3_k127_7584608_6 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008254 391.0
BYD3_k127_7584608_7 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 320.0
BYD3_k127_7584608_8 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 320.0
BYD3_k127_7584608_9 peptidyl-prolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 321.0
BYD3_k127_7586277_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 364.0
BYD3_k127_7586277_1 - - - - 0.0000000004419 73.0
BYD3_k127_7685059_0 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 592.0
BYD3_k127_7685059_1 PQQ-like domain K17760 - 1.1.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007524 509.0
BYD3_k127_7685059_2 Outer membrane protein beta-barrel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 496.0
BYD3_k127_7685059_3 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 342.0
BYD3_k127_7685059_4 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004554 329.0
BYD3_k127_7685059_5 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000009399 243.0
BYD3_k127_7685059_6 ankyrin repeat K15503 - - 0.00000000000000000000000000000000000000000000000000000000000000004988 243.0
BYD3_k127_7685059_7 Two component transcriptional regulator, winged helix family K07657 - - 0.000000000000000000000000000000000000000000000000000000003264 208.0
BYD3_k127_7685059_8 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000329 147.0
BYD3_k127_7685059_9 iron ion binding K04123,K07437,K09587,K09588,K09589,K09590,K09843,K12637,K12638,K12639,K12640,K12664,K12665,K17875,K20667 GO:0000003,GO:0000226,GO:0000280,GO:0000902,GO:0000904,GO:0001101,GO:0001501,GO:0001523,GO:0001568,GO:0001578,GO:0001655,GO:0001709,GO:0001756,GO:0001767,GO:0001768,GO:0001775,GO:0001822,GO:0001944,GO:0001972,GO:0002376,GO:0002682,GO:0002694,GO:0003002,GO:0003006,GO:0003007,GO:0003131,GO:0003151,GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0005501,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006081,GO:0006082,GO:0006091,GO:0006629,GO:0006694,GO:0006714,GO:0006720,GO:0006721,GO:0006722,GO:0006766,GO:0006775,GO:0006805,GO:0006950,GO:0006952,GO:0006954,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007140,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007276,GO:0007283,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0007584,GO:0008144,GO:0008150,GO:0008152,GO:0008202,GO:0008219,GO:0008289,GO:0008299,GO:0008300,GO:0008395,GO:0008401,GO:0008544,GO:0008610,GO:0009056,GO:0009058,GO:0009111,GO:0009314,GO:0009410,GO:0009411,GO:0009414,GO:0009415,GO:0009416,GO:0009555,GO:0009605,GO:0009628,GO:0009639,GO:0009642,GO:0009646,GO:0009647,GO:0009653,GO:0009685,GO:0009686,GO:0009687,GO:0009719,GO:0009725,GO:0009741,GO:0009753,GO:0009755,GO:0009790,GO:0009791,GO:0009792,GO:0009826,GO:0009846,GO:0009856,GO:0009860,GO:0009867,GO:0009887,GO:0009888,GO:0009893,GO:0009908,GO:0009909,GO:0009911,GO:0009913,GO:0009932,GO:0009952,GO:0009954,GO:0009965,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010012,GO:0010016,GO:0010033,GO:0010035,GO:0010114,GO:0010154,GO:0010162,GO:0010171,GO:0010208,GO:0010224,GO:0010268,GO:0010295,GO:0010358,GO:0010431,GO:0010468,GO:0010584,GO:0010604,GO:0010628,GO:0010646,GO:0010648,GO:0010817,GO:0010830,GO:0010831,GO:0010927,GO:0012501,GO:0012505,GO:0014031,GO:0014032,GO:0014033,GO:0014070,GO:0014706,GO:0016020,GO:0016042,GO:0016043,GO:0016049,GO:0016053,GO:0016054,GO:0016101,GO:0016102,GO:0016103,GO:0016107,GO:0016114,GO:0016115,GO:0016125,GO:0016128,GO:0016129,GO:0016131,GO:0016132,GO:0016134,GO:0016135,GO:0016137,GO:0016138,GO:0016202,GO:0016491,GO:0016705,GO:0016709,GO:0019222,GO:0019752,GO:0019825,GO:0019840,GO:0019953,GO:0020037,GO:0021532,GO:0021546,GO:0021570,GO:0021593,GO:0021661,GO:0021700,GO:0021797,GO:0021871,GO:0021903,GO:0021915,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0022611,GO:0022900,GO:0023051,GO:0023052,GO:0023057,GO:0030010,GO:0030104,GO:0030154,GO:0030198,GO:0030216,GO:0030278,GO:0030326,GO:0030522,GO:0030855,GO:0030900,GO:0030902,GO:0030917,GO:0031016,GO:0031090,GO:0031406,GO:0031424,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032526,GO:0032787,GO:0032870,GO:0032989,GO:0033189,GO:0033273,GO:0033293,GO:0033561,GO:0033993,GO:0034653,GO:0034672,GO:0034754,GO:0035051,GO:0035107,GO:0035108,GO:0035113,GO:0035282,GO:0035295,GO:0036094,GO:0039017,GO:0040007,GO:0042110,GO:0042175,GO:0042221,GO:0042363,GO:0042445,GO:0042446,GO:0042476,GO:0042573,GO:0042574,GO:0042592,GO:0042692,GO:0042814,GO:0043009,GO:0043062,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043288,GO:0043290,GO:0043436,GO:0043586,GO:0043587,GO:0043588,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0045165,GO:0045229,GO:0045321,GO:0045580,GO:0045595,GO:0045597,GO:0045619,GO:0045844,GO:0046164,GO:0046345,GO:0046394,GO:0046395,GO:0046649,GO:0046906,GO:0048037,GO:0048229,GO:0048232,GO:0048284,GO:0048285,GO:0048316,GO:0048366,GO:0048367,GO:0048384,GO:0048385,GO:0048387,GO:0048437,GO:0048438,GO:0048441,GO:0048443,GO:0048444,GO:0048448,GO:0048449,GO:0048455,GO:0048465,GO:0048466,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048532,GO:0048562,GO:0048568,GO:0048580,GO:0048582,GO:0048583,GO:0048585,GO:0048588,GO:0048589,GO:0048598,GO:0048608,GO:0048609,GO:0048634,GO:0048636,GO:0048641,GO:0048643,GO:0048646,GO:0048653,GO:0048654,GO:0048655,GO:0048656,GO:0048657,GO:0048658,GO:0048701,GO:0048704,GO:0048705,GO:0048706,GO:0048729,GO:0048731,GO:0048736,GO:0048738,GO:0048762,GO:0048793,GO:0048827,GO:0048831,GO:0048838,GO:0048854,GO:0048856,GO:0048863,GO:0048864,GO:0048868,GO:0048869,GO:0048871,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050863,GO:0050865,GO:0050878,GO:0050891,GO:0050896,GO:0051094,GO:0051146,GO:0051147,GO:0051149,GO:0051153,GO:0051155,GO:0051216,GO:0051239,GO:0051240,GO:0051249,GO:0051321,GO:0051704,GO:0051716,GO:0051777,GO:0055001,GO:0055002,GO:0055006,GO:0055007,GO:0055011,GO:0055013,GO:0055014,GO:0055088,GO:0055114,GO:0060173,GO:0060255,GO:0060322,GO:0060323,GO:0060348,GO:0060349,GO:0060363,GO:0060365,GO:0060429,GO:0060485,GO:0060536,GO:0060537,GO:0060560,GO:0061004,GO:0061053,GO:0061061,GO:0061436,GO:0061448,GO:0061458,GO:0065007,GO:0065008,GO:0070268,GO:0070887,GO:0071229,GO:0071295,GO:0071299,GO:0071300,GO:0071310,GO:0071395,GO:0071396,GO:0071466,GO:0071495,GO:0071496,GO:0071695,GO:0071704,GO:0071840,GO:0072001,GO:0072048,GO:0072098,GO:0072329,GO:0072358,GO:0072359,GO:0080132,GO:0085029,GO:0090242,GO:0090567,GO:0090596,GO:0090696,GO:0090697,GO:0090698,GO:0097094,GO:0097159,GO:0097438,GO:0098827,GO:0099402,GO:0140013,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901657,GO:1901659,GO:1901700,GO:1901701,GO:1901861,GO:1901863,GO:1902105,GO:1902644,GO:1902809,GO:1902811,GO:1903046,GO:1903706,GO:1904888,GO:1905392,GO:1905393,GO:2000026,GO:2000241,GO:2000243,GO:2001014,GO:2001016,GO:2001035,GO:2001037 1.14.13.112,1.14.13.134,1.14.13.201,1.14.13.79,1.14.13.93 0.0000000000003812 83.0
BYD3_k127_7703296_0 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000004109 212.0
BYD3_k127_7703296_1 domain protein - - - 0.0000000000000000000006446 112.0
BYD3_k127_7705762_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008253 437.0
BYD3_k127_7705762_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000007866 183.0
BYD3_k127_7705762_2 23S rRNA-intervening sequence protein - - - 0.000006251 56.0
BYD3_k127_7713499_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 477.0
BYD3_k127_7713499_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000295 291.0
BYD3_k127_7713499_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003279 253.0
BYD3_k127_7713499_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000006795 249.0
BYD3_k127_7713499_5 PFAM phosphoesterase, PA-phosphatase related - - - 0.000000000000001808 87.0
BYD3_k127_7713499_6 domain protein - - - 0.0000000008312 71.0
BYD3_k127_7713499_7 Carboxypeptidase regulatory-like domain - - - 0.00001062 59.0
BYD3_k127_772604_0 Protein of unknown function (DUF3500) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 520.0
BYD3_k127_772604_1 Domains REC, sigma54 interaction, HTH8 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 481.0
BYD3_k127_772604_10 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000001474 212.0
BYD3_k127_772604_11 Cytochrome c K03611 - - 0.00000000000000000000000000000000000000000000000000000003688 201.0
BYD3_k127_772604_12 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000000000000000000000005668 182.0
BYD3_k127_772604_13 META domain K03929 - - 0.0000000000000000000000000000000000000000000005242 173.0
BYD3_k127_772604_14 Peptidase family M50 K06402 - - 0.000000000000000000000000000000000000000000003228 174.0
BYD3_k127_772604_15 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000001862 167.0
BYD3_k127_772604_16 Cytochrome c K00413 - - 0.000000000000007002 81.0
BYD3_k127_772604_17 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.000000007068 70.0
BYD3_k127_772604_18 - - - - 0.0000005783 57.0
BYD3_k127_772604_19 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000005222 57.0
BYD3_k127_772604_2 PFAM aminoacyl-tRNA synthetase class Ib K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 468.0
BYD3_k127_772604_3 Domains REC, sigma54 interaction, HTH8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 462.0
BYD3_k127_772604_4 NapC/NirT cytochrome c family, N-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009651 381.0
BYD3_k127_772604_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 300.0
BYD3_k127_772604_6 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001617 292.0
BYD3_k127_772604_7 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000001143 268.0
BYD3_k127_772604_8 Oxidoreductase molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007845 259.0
BYD3_k127_772604_9 Doubled CXXCH motif (Paired_CXXCH_1) K08354 - - 0.00000000000000000000000000000000000000000000000000000000000000000002159 244.0
BYD3_k127_7727992_0 Heat shock 70 kDa protein K04043 - - 3.588e-295 917.0
BYD3_k127_7727992_1 Domain of unknown function (DUF5117) - - - 4.654e-292 923.0
BYD3_k127_7727992_10 PFAM alpha beta hydrolase fold K01561 - 3.8.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 304.0
BYD3_k127_7727992_11 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005315 285.0
BYD3_k127_7727992_12 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000002997 259.0
BYD3_k127_7727992_13 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000001228 258.0
BYD3_k127_7727992_14 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000008914 248.0
BYD3_k127_7727992_15 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000006407 182.0
BYD3_k127_7727992_16 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000001175 164.0
BYD3_k127_7727992_17 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000008231 156.0
BYD3_k127_7727992_18 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000005376 154.0
BYD3_k127_7727992_19 Prolyl oligopeptidase family K06889 - - 0.00000000000000000000000000000000003907 145.0
BYD3_k127_7727992_2 efflux transmembrane transporter activity - - - 5.606e-209 680.0
BYD3_k127_7727992_21 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0000000000000000000000000003661 132.0
BYD3_k127_7727992_22 Belongs to the eIF-2B alpha beta delta subunits family K03680 - - 0.000000000000000000000000000456 126.0
BYD3_k127_7727992_23 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000002363 83.0
BYD3_k127_7727992_24 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000002157 74.0
BYD3_k127_7727992_25 Hsp20/alpha crystallin family K13993 - - 0.000000000000749 79.0
BYD3_k127_7727992_26 - - - - 0.0000000009116 68.0
BYD3_k127_7727992_27 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.000000004114 69.0
BYD3_k127_7727992_28 von willebrand factor type a K07114 - - 0.0000002071 63.0
BYD3_k127_7727992_3 thiamine-containing compound biosynthetic process K02051 - - 1.736e-206 659.0
BYD3_k127_7727992_4 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 574.0
BYD3_k127_7727992_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601,K03797 - 3.1.11.6,3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 384.0
BYD3_k127_7727992_6 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 356.0
BYD3_k127_7727992_7 Trehalose utilisation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004648 329.0
BYD3_k127_7727992_8 YmdB-like protein K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 316.0
BYD3_k127_7727992_9 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 302.0
BYD3_k127_774848_0 DNA topological change K03168 - 5.99.1.2 3.149e-205 664.0
BYD3_k127_774848_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005268 578.0
BYD3_k127_774848_10 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008937 332.0
BYD3_k127_774848_11 nitric oxide reductase activity K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006213 306.0
BYD3_k127_774848_12 Rhodanese-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001092 279.0
BYD3_k127_774848_13 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001704 280.0
BYD3_k127_774848_14 Protein of unknown function (DUF998) - - - 0.0000000000000000000000000000000000000000000000000000000000000000003317 238.0
BYD3_k127_774848_15 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000008461 237.0
BYD3_k127_774848_16 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000004953 201.0
BYD3_k127_774848_17 Metalloenzyme superfamily - - - 0.000000000000000000000000000000000000000000000000009788 194.0
BYD3_k127_774848_18 - - - - 0.000000000000000000000000000000000000000000003129 174.0
BYD3_k127_774848_19 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000003876 164.0
BYD3_k127_774848_2 Pfam Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 531.0
BYD3_k127_774848_20 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000004303 141.0
BYD3_k127_774848_21 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078,K05553,K12421,K22463 - - 0.00000000000000000000000002404 122.0
BYD3_k127_774848_22 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.00000000000000000002085 98.0
BYD3_k127_774848_24 Pfam:Methyltransf_26 - - - 0.00000000000004119 83.0
BYD3_k127_774848_3 Aldehyde dehydrogenase family K00154 - 1.2.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 480.0
BYD3_k127_774848_4 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 477.0
BYD3_k127_774848_5 phosphorelay signal transduction system K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 503.0
BYD3_k127_774848_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K20974 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 451.0
BYD3_k127_774848_7 ankyrin repeat K15503 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 424.0
BYD3_k127_774848_8 protoporphyrinogen oxidase activity K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 416.0
BYD3_k127_774848_9 ABC1 family K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 374.0
BYD3_k127_7768530_0 FtsX-like permease family - - - 0.00000000000000000000000000000000039 136.0
BYD3_k127_7768530_1 SAM-dependent methyltransferase - - - 0.000000000003537 77.0
BYD3_k127_7807540_0 Manganese containing catalase K07217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 591.0
BYD3_k127_7807540_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 558.0
BYD3_k127_7807540_10 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 376.0
BYD3_k127_7807540_11 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 353.0
BYD3_k127_7807540_12 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 317.0
BYD3_k127_7807540_13 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000008214 250.0
BYD3_k127_7807540_14 DNA-templated transcription, initiation - - - 0.000000000000000000000000000000000000000000000000000000000000000003512 237.0
BYD3_k127_7807540_15 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000004837 229.0
BYD3_k127_7807540_16 peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000001403 218.0
BYD3_k127_7807540_17 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000001521 199.0
BYD3_k127_7807540_18 Stress-induced protein - - - 0.0000000000000000000000000000000000000000000000002232 190.0
BYD3_k127_7807540_19 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.0000000000000000000000000000000000000000000000002813 185.0
BYD3_k127_7807540_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 570.0
BYD3_k127_7807540_20 Glycosyltransferase like family 2 K07011 - - 0.00000000000000000000000000000000000000000001021 175.0
BYD3_k127_7807540_21 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000001453 179.0
BYD3_k127_7807540_22 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000001583 142.0
BYD3_k127_7807540_23 von Willebrand factor, type A - - - 0.0000000000000000000000000000002253 135.0
BYD3_k127_7807540_24 bacterial (prokaryotic) histone like domain K03530 - - 0.000000000000000000000000000003545 128.0
BYD3_k127_7807540_25 Oxidoreductase molybdopterin binding domain K07147 GO:0000302,GO:0001101,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0016491,GO:0016667,GO:0016672,GO:0016675,GO:0019538,GO:0030091,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0043170,GO:0043546,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0048037,GO:0050662,GO:0050896,GO:0055114,GO:0071704,GO:0097159,GO:1901363,GO:1901530,GO:1901564,GO:1901700 - 0.00000000000000000000000000006553 123.0
BYD3_k127_7807540_26 Multi-sensor signal transduction multi-kinase - - - 0.00000000000000000000000006066 116.0
BYD3_k127_7807540_27 PFAM TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000001279 106.0
BYD3_k127_7807540_28 Sigma-54 interaction domain K07714 - - 0.00000000000000000006107 98.0
BYD3_k127_7807540_29 Regulatory protein - - - 0.00000000004949 73.0
BYD3_k127_7807540_3 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 512.0
BYD3_k127_7807540_30 hydrolase K01048 - 3.1.1.5 0.00000007341 54.0
BYD3_k127_7807540_4 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 417.0
BYD3_k127_7807540_5 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 411.0
BYD3_k127_7807540_6 Bacterial sugar transferase K03606 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000969 393.0
BYD3_k127_7807540_7 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 385.0
BYD3_k127_7807540_8 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 365.0
BYD3_k127_7807540_9 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 366.0
BYD3_k127_7810379_0 Response regulator receiver K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 312.0
BYD3_k127_7810379_1 - - - - 0.000000000000000000000000000000005495 147.0
BYD3_k127_7810379_2 bacterial OsmY and nodulation domain - - - 0.0000000711 66.0
BYD3_k127_7810447_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 589.0
BYD3_k127_7810447_1 membrane protein (DUF2254) - - - 0.0000000001143 66.0
BYD3_k127_7830284_0 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004647 257.0
BYD3_k127_7830284_1 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002691 269.0
BYD3_k127_7830284_2 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000005345 198.0
BYD3_k127_7830284_3 Pectate lyase - - - 0.00000005927 66.0
BYD3_k127_7830284_4 DUF218 domain - - - 0.00003804 53.0
BYD3_k127_785128_0 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001006 284.0
BYD3_k127_785128_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007919 259.0
BYD3_k127_785128_10 Cytochrome c - - - 0.0000000000000000000567 100.0
BYD3_k127_785128_11 - - - - 0.00000000000000002818 93.0
BYD3_k127_785128_2 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K21744 - - 0.0000000000000000000000000000000000000000000000000000000000000005192 231.0
BYD3_k127_785128_3 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.000000000000000000000000000000000000000000000000000000006986 203.0
BYD3_k127_785128_4 bleomycin resistance protein K01759 - 4.4.1.5 0.00000000000000000000000000000000000000006665 153.0
BYD3_k127_785128_5 - K02172 - - 0.0000000000000000000000000000000000004888 148.0
BYD3_k127_785128_6 - - - - 0.000000000000000000000000000000000001611 152.0
BYD3_k127_785128_7 - - - - 0.0000000000000000000000000002312 130.0
BYD3_k127_785128_8 - - - - 0.000000000000000000000000002004 121.0
BYD3_k127_785128_9 - - - - 0.000000000000000000005538 107.0
BYD3_k127_7857866_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1040.0
BYD3_k127_7857866_1 Belongs to the glycosyl hydrolase 67 family K01235 - 3.2.1.139 0.0 1011.0
BYD3_k127_7857866_10 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 434.0
BYD3_k127_7857866_11 Type I phosphodiesterase / nucleotide pyrophosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 422.0
BYD3_k127_7857866_12 FGGY family of carbohydrate kinases, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003732 426.0
BYD3_k127_7857866_13 cytochrome C peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 346.0
BYD3_k127_7857866_14 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006261 320.0
BYD3_k127_7857866_15 PFAM peptidase M16 domain protein K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 343.0
BYD3_k127_7857866_16 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 321.0
BYD3_k127_7857866_17 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 293.0
BYD3_k127_7857866_18 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001337 280.0
BYD3_k127_7857866_19 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000036 282.0
BYD3_k127_7857866_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 7.715e-283 893.0
BYD3_k127_7857866_20 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000004476 259.0
BYD3_k127_7857866_21 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000003313 214.0
BYD3_k127_7857866_22 MotA TolQ ExbB proton channel K03561,K03562 - - 0.00000000000000000000000000000000000000000000000000000000004009 225.0
BYD3_k127_7857866_23 - - - - 0.000000000000000000000000000000000000000002601 167.0
BYD3_k127_7857866_24 endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000001862 151.0
BYD3_k127_7857866_25 TIGRFAM TonB K03832 - - 0.00000000000000000000000000000000000000324 155.0
BYD3_k127_7857866_26 Hydrolase, NUDIX family K01515 - 3.6.1.13 0.000000000000000000000000000000000002154 148.0
BYD3_k127_7857866_27 - - - - 0.0000000000000000000000000000000001437 142.0
BYD3_k127_7857866_28 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000758 138.0
BYD3_k127_7857866_29 protein TIM barrel - - - 0.00000000000000000000000000005736 135.0
BYD3_k127_7857866_3 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.125e-274 853.0
BYD3_k127_7857866_31 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.00000000000000000000000003128 114.0
BYD3_k127_7857866_32 - - - - 0.000000000000000000004801 102.0
BYD3_k127_7857866_33 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000001278 98.0
BYD3_k127_7857866_34 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000002909 99.0
BYD3_k127_7857866_35 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000002632 95.0
BYD3_k127_7857866_36 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000006191 88.0
BYD3_k127_7857866_37 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.0000000000000005039 77.0
BYD3_k127_7857866_39 - - - - 0.0000000002362 70.0
BYD3_k127_7857866_4 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.812e-247 783.0
BYD3_k127_7857866_40 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.0000000004757 72.0
BYD3_k127_7857866_41 PFAM Tetratricopeptide repeat - - - 0.0004836 51.0
BYD3_k127_7857866_5 PQQ-like domain K00114 - 1.1.2.8 1.661e-227 715.0
BYD3_k127_7857866_6 lipolytic protein G-D-S-L family - - - 2.039e-213 677.0
BYD3_k127_7857866_7 Carboxypeptidase regulatory-like domain - - - 4.746e-203 672.0
BYD3_k127_7857866_8 PFAM Xylose isomerase domain protein TIM barrel K01805 - 5.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 542.0
BYD3_k127_7857866_9 Homoserine dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006506 455.0
BYD3_k127_7907207_0 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 527.0
BYD3_k127_7907207_1 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 505.0
BYD3_k127_7907207_10 PFAM methyltransferase - - - 0.00000000569 68.0
BYD3_k127_7907207_11 Psort location CytoplasmicMembrane, score - - - 0.0000005024 63.0
BYD3_k127_7907207_12 Psort location CytoplasmicMembrane, score - - - 0.0000006743 63.0
BYD3_k127_7907207_13 Bacterial membrane protein YfhO - - - 0.0001273 55.0
BYD3_k127_7907207_14 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.0002848 53.0
BYD3_k127_7907207_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 499.0
BYD3_k127_7907207_3 synthase K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 486.0
BYD3_k127_7907207_4 GDP-mannose 4,6 dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 484.0
BYD3_k127_7907207_5 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 328.0
BYD3_k127_7907207_6 PFAM Bacterial transferase hexapeptide (three repeats) K13018 - 2.3.1.201 0.00000000000000000000000000000000000000000000000000000000002635 209.0
BYD3_k127_7907207_7 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000002314 114.0
BYD3_k127_7907207_8 Cytidylyltransferase-like - - - 0.00000000002093 76.0
BYD3_k127_7907207_9 Bacterial membrane protein YfhO - - - 0.0000000006777 73.0
BYD3_k127_8001040_0 DEAD DEAH box K03724 - - 0.0 1793.0
BYD3_k127_8001040_1 Alpha amylase, catalytic domain K06044 - 5.4.99.15 3.097e-287 924.0
BYD3_k127_8001040_10 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009402 370.0
BYD3_k127_8001040_11 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 338.0
BYD3_k127_8001040_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 333.0
BYD3_k127_8001040_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 336.0
BYD3_k127_8001040_14 heat shock protein binding K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 318.0
BYD3_k127_8001040_15 Belongs to the FPG family K05522 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001379 278.0
BYD3_k127_8001040_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000002491 248.0
BYD3_k127_8001040_17 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000005658 240.0
BYD3_k127_8001040_18 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000006682 212.0
BYD3_k127_8001040_19 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000005422 211.0
BYD3_k127_8001040_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 611.0
BYD3_k127_8001040_20 Protein of unknown function (DUF520) K09767 - - 0.00000000000000000000000000000000000000000000000000001027 194.0
BYD3_k127_8001040_21 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000001959 203.0
BYD3_k127_8001040_22 to YegS from E. coli K07029 GO:0003674,GO:0003824,GO:0004143,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.107 0.0000000000000000000000000000000000000000003787 172.0
BYD3_k127_8001040_23 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000000000000000000000000000000001449 156.0
BYD3_k127_8001040_24 Transcriptional regulator - - - 0.000000000000000000000000000000000000552 152.0
BYD3_k127_8001040_25 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.00000000000000000000000000000000003384 138.0
BYD3_k127_8001040_26 NADH dehydrogenase K00334 - 1.6.5.3 0.0000000000000000000000000000000002447 147.0
BYD3_k127_8001040_27 TIGRFAM VWFA-related Acidobacterial domain - - - 0.00000000000000000000000000000007334 144.0
BYD3_k127_8001040_28 TIGRFAM VWFA-related Acidobacterial domain - - - 0.000000000000000000000000000000422 141.0
BYD3_k127_8001040_29 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000002108 124.0
BYD3_k127_8001040_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 494.0
BYD3_k127_8001040_30 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000003386 117.0
BYD3_k127_8001040_31 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure - - - 0.000000000000000000000000005082 113.0
BYD3_k127_8001040_32 Gas vesicle protein K - - - 0.00000000000000000000000009068 111.0
BYD3_k127_8001040_33 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000000006508 122.0
BYD3_k127_8001040_34 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth - - - 0.000000000000000000000006972 104.0
BYD3_k127_8001040_35 Domain of unknown function (DUF4154) - - - 0.00000000000000000000003178 113.0
BYD3_k127_8001040_36 PIN domain - - - 0.0000000000000000001273 97.0
BYD3_k127_8001040_37 PFAM Gas vesicle synthesis - - - 0.000000000000000006368 97.0
BYD3_k127_8001040_38 - - - - 0.0000000000000003663 81.0
BYD3_k127_8001040_39 - - - - 0.000000000000003096 82.0
BYD3_k127_8001040_4 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 480.0
BYD3_k127_8001040_41 PIN domain - - - 0.0000000003981 65.0
BYD3_k127_8001040_42 Domain of unknown function (DUF4956) - - - 0.00000004745 66.0
BYD3_k127_8001040_43 PEGA domain - - - 0.00000006502 64.0
BYD3_k127_8001040_44 Transcriptional regulator - - - 0.000001025 56.0
BYD3_k127_8001040_45 Gas vesicle synthesis protein GvpL/GvpF - - - 0.00003894 55.0
BYD3_k127_8001040_46 Gas vesicle protein G - - - 0.0001224 52.0
BYD3_k127_8001040_48 COG3678 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein K06006 - - 0.0002483 50.0
BYD3_k127_8001040_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 453.0
BYD3_k127_8001040_6 TonB dependent receptor K02014,K16089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003169 453.0
BYD3_k127_8001040_7 serine-type peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 438.0
BYD3_k127_8001040_8 Phospholipase D. Active site motifs. K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 386.0
BYD3_k127_8001040_9 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 389.0
BYD3_k127_800268_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 399.0
BYD3_k127_800268_1 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01919,K01955,K03802 - 6.3.2.2,6.3.2.29,6.3.2.30,6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 362.0
BYD3_k127_800268_10 PASTA K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.000000000000004294 84.0
BYD3_k127_800268_11 - - - - 0.000000000002571 73.0
BYD3_k127_800268_2 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 309.0
BYD3_k127_800268_3 carboxylic acid catabolic process K01856,K19802 - 5.1.1.20,5.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 300.0
BYD3_k127_800268_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005377 290.0
BYD3_k127_800268_5 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000001917 252.0
BYD3_k127_800268_6 iron ion binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005587 249.0
BYD3_k127_800268_7 two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000001054 255.0
BYD3_k127_800268_8 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000002337 181.0
BYD3_k127_8065814_0 TonB dependent receptor - - - 5.254e-316 996.0
BYD3_k127_8065814_1 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.000000000000000000000000000000000000000003923 160.0
BYD3_k127_8065814_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000004616 155.0
BYD3_k127_8065814_3 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000002811 153.0
BYD3_k127_8065814_4 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000009499 111.0
BYD3_k127_8065814_5 sequence-specific DNA binding - - - 0.00000000000000000002591 102.0
BYD3_k127_8065814_6 Subtilase family - - - 0.000000000002177 70.0
BYD3_k127_8075371_0 Cytochrome c-type biogenesis protein K02198 - - 1.696e-231 741.0
BYD3_k127_8075371_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 385.0
BYD3_k127_8075371_10 ABC transporter K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000004444 180.0
BYD3_k127_8075371_11 PIN domain - - - 0.000000000000000000000000000000000000000000008486 166.0
BYD3_k127_8075371_12 Cytochrome C assembly protein K02195 - - 0.000000000000000000000000000000000000000000009894 170.0
BYD3_k127_8075371_13 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.00000000000000000000000000000000000008878 160.0
BYD3_k127_8075371_14 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000000000000000000002877 122.0
BYD3_k127_8075371_15 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000007176 128.0
BYD3_k127_8075371_16 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000001333 119.0
BYD3_k127_8075371_17 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000004491 106.0
BYD3_k127_8075371_18 PFAM SNARE associated Golgi protein - - - 0.000000000000000000003389 103.0
BYD3_k127_8075371_19 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.00000000000000000007873 96.0
BYD3_k127_8075371_2 Pirin K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003658 291.0
BYD3_k127_8075371_20 negative regulation of transcription, DNA-templated - - - 0.000000000000000004952 88.0
BYD3_k127_8075371_21 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000004798 87.0
BYD3_k127_8075371_23 NAD(P)H dehydrogenase (quinone) activity K03809 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.6.5.2 0.000000000001354 76.0
BYD3_k127_8075371_25 - - - - 0.00000000001495 73.0
BYD3_k127_8075371_26 Protein kinase domain K12132 - 2.7.11.1 0.00000000001984 66.0
BYD3_k127_8075371_27 - - - - 0.00000000578 70.0
BYD3_k127_8075371_29 - - - - 0.0000233 55.0
BYD3_k127_8075371_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007853 285.0
BYD3_k127_8075371_30 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00002357 51.0
BYD3_k127_8075371_31 SpoVT / AbrB like domain - - - 0.00008191 48.0
BYD3_k127_8075371_32 von Willebrand factor, type A K07114 - - 0.0004693 51.0
BYD3_k127_8075371_4 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000074 284.0
BYD3_k127_8075371_5 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000006047 270.0
BYD3_k127_8075371_6 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005089 261.0
BYD3_k127_8075371_7 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000004355 222.0
BYD3_k127_8075371_8 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000001116 213.0
BYD3_k127_8075371_9 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000003304 208.0
BYD3_k127_8097494_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 463.0
BYD3_k127_8097494_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004764 413.0
BYD3_k127_8097494_2 peptidyl-tyrosine sulfation - - - 0.0000000000000001143 94.0
BYD3_k127_8133101_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.0 1168.0
BYD3_k127_8133101_1 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009408 536.0
BYD3_k127_8133101_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005964 424.0
BYD3_k127_8133101_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 401.0
BYD3_k127_8133101_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000139 243.0
BYD3_k127_8133101_5 Sigma-54 interaction domain K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000002928 244.0
BYD3_k127_8133101_6 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000001505 154.0
BYD3_k127_8133101_7 Hydrolase, P-loop family K06925 GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000077 120.0
BYD3_k127_8133101_8 ABC transporter K20490 - - 0.00000000000000000000001995 109.0
BYD3_k127_8133101_9 domain protein - - - 0.0000000007976 72.0
BYD3_k127_8133236_0 ATP:ADP antiporter activity K01932,K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000005901 252.0
BYD3_k127_8133236_1 - K02172 - - 0.0000000000000000000000000000000000005255 149.0
BYD3_k127_8133236_2 Surface antigen - - - 0.00008068 48.0
BYD3_k127_8139029_0 Belongs to the malate synthase family K01638 - 2.3.3.9 5.014e-296 919.0
BYD3_k127_8139029_1 peptidase S9 prolyl oligopeptidase active site domain protein - - - 3.24e-230 730.0
BYD3_k127_8139029_10 DoxX family K15977 - - 0.000000000000000000000000008275 115.0
BYD3_k127_8139029_11 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.0000000000000000001393 89.0
BYD3_k127_8139029_12 - - - - 0.000000000000003766 78.0
BYD3_k127_8139029_13 - - - - 0.00000000000477 75.0
BYD3_k127_8139029_2 PQQ-like domain K05889 - 1.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 525.0
BYD3_k127_8139029_3 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 511.0
BYD3_k127_8139029_4 Trehalose utilisation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 401.0
BYD3_k127_8139029_5 abc transporter atp-binding protein K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000003577 255.0
BYD3_k127_8139029_6 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001331 244.0
BYD3_k127_8139029_7 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000008305 169.0
BYD3_k127_8139029_8 Belongs to the UPF0145 family - - - 0.00000000000000000000000000000000000003271 148.0
BYD3_k127_8139029_9 domain protein K14194 - - 0.00000000000000000000000000008797 135.0
BYD3_k127_8147303_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 471.0
BYD3_k127_8147303_1 Amidohydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006635 414.0
BYD3_k127_8147303_10 - - - - 0.000000000000000000000000000000000000007187 157.0
BYD3_k127_8147303_11 Tetratricopeptide repeat - - - 0.0000000000000000000009871 106.0
BYD3_k127_8147303_12 NMT1-like family K02051 - - 0.0000003439 62.0
BYD3_k127_8147303_2 Amidohydrolase K10220 - 4.2.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 396.0
BYD3_k127_8147303_3 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004386 370.0
BYD3_k127_8147303_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005393 322.0
BYD3_k127_8147303_5 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 302.0
BYD3_k127_8147303_6 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15061 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008159 293.0
BYD3_k127_8147303_7 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002701 269.0
BYD3_k127_8147303_8 Aldolase/RraA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001 245.0
BYD3_k127_8147303_9 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000001005 233.0
BYD3_k127_81542_0 ABC transporter C-terminal domain K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006047 584.0
BYD3_k127_81542_1 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004247 296.0
BYD3_k127_81542_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000005056 154.0
BYD3_k127_81542_3 response regulator - - - 0.00000000000000000000005198 106.0
BYD3_k127_8260982_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1062.0
BYD3_k127_8260982_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 3.163e-248 788.0
BYD3_k127_8260982_10 Ethanolamine ammonia lyase large subunit (EutB) K03735 - 4.3.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007145 398.0
BYD3_k127_8260982_11 PFAM glycosyl transferase family 51 K05366,K21464 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 373.0
BYD3_k127_8260982_12 PFAM ATPase associated with various cellular activities, AAA_5 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 363.0
BYD3_k127_8260982_13 tRNA 3'-trailer cleavage - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007471 355.0
BYD3_k127_8260982_14 VWA domain containing CoxE-like protein K07161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005831 332.0
BYD3_k127_8260982_15 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008953 319.0
BYD3_k127_8260982_16 DnaJ molecular chaperone homology domain K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003565 316.0
BYD3_k127_8260982_17 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 316.0
BYD3_k127_8260982_18 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 308.0
BYD3_k127_8260982_19 Belongs to the peptidase M12A family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001704 282.0
BYD3_k127_8260982_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.063e-219 698.0
BYD3_k127_8260982_20 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000007719 251.0
BYD3_k127_8260982_21 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000001071 247.0
BYD3_k127_8260982_22 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000007926 222.0
BYD3_k127_8260982_23 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000001974 218.0
BYD3_k127_8260982_24 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000002287 212.0
BYD3_k127_8260982_25 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000108 211.0
BYD3_k127_8260982_26 - - - - 0.000000000000000000000000000000000000000000000000001718 190.0
BYD3_k127_8260982_27 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 4.1.1.65 0.0000000000000000000000000000000000000000000000001444 184.0
BYD3_k127_8260982_28 Membrane protein, TerC - - - 0.0000000000000000000000000000000000000000001362 169.0
BYD3_k127_8260982_29 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000000000008277 153.0
BYD3_k127_8260982_3 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 1.357e-219 710.0
BYD3_k127_8260982_30 Beta-lactamase - - - 0.00000000000000000000000000000000007733 147.0
BYD3_k127_8260982_31 Carbon monoxide dehydrogenase subunit G (CoxG) K09386 - - 0.0000000000000000000000000000000003835 136.0
BYD3_k127_8260982_32 Alpha beta hydrolase - - - 0.000000000000000000000000000000001714 146.0
BYD3_k127_8260982_33 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000000000000001758 140.0
BYD3_k127_8260982_34 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.000000000000000000000000000000009767 146.0
BYD3_k127_8260982_35 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000002041 125.0
BYD3_k127_8260982_36 iron ion homeostasis - - - 0.00000000000000000000000000004022 134.0
BYD3_k127_8260982_37 SnoaL-like domain K06893 - - 0.000000000000000000000000000544 119.0
BYD3_k127_8260982_38 - - - - 0.00000000000000000000000001379 120.0
BYD3_k127_8260982_39 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000003446 104.0
BYD3_k127_8260982_4 Berberine and berberine like - - - 9.423e-198 647.0
BYD3_k127_8260982_40 helix_turn_helix, mercury resistance K13640 - - 0.0000000000000000000002163 104.0
BYD3_k127_8260982_41 Universal bacterial protein YeaZ K14742 - - 0.00000000000000000001266 102.0
BYD3_k127_8260982_42 PFAM glycoside hydrolase family 13 domain protein - - - 0.000000000000000004466 93.0
BYD3_k127_8260982_43 Probably functions as a manganese efflux pump - - - 0.00000000000000006628 90.0
BYD3_k127_8260982_44 Domain of unknown function (DUF4390) - - - 0.00000000002171 71.0
BYD3_k127_8260982_45 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.000000001611 63.0
BYD3_k127_8260982_47 1,4-alpha-glucan branching enzyme activity K00700 - 2.4.1.18 0.0000007198 61.0
BYD3_k127_8260982_48 Protein of unknown function (DUF465) - - - 0.000004706 51.0
BYD3_k127_8260982_5 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 516.0
BYD3_k127_8260982_50 - - - - 0.0001077 50.0
BYD3_k127_8260982_51 Tetratricopeptide repeat - - - 0.0002968 52.0
BYD3_k127_8260982_52 Belongs to the phycobilisome linker protein family K02290 - - 0.0007422 51.0
BYD3_k127_8260982_6 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 512.0
BYD3_k127_8260982_7 PA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 449.0
BYD3_k127_8260982_8 PFAM Prenyltransferase squalene oxidase K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 469.0
BYD3_k127_8260982_9 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 411.0
BYD3_k127_830168_0 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006953 461.0
BYD3_k127_830168_1 Zinc dependent phospholipase C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005245 364.0
BYD3_k127_830168_10 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.0000000000000000000000000000001381 132.0
BYD3_k127_830168_11 - - - - 0.00000000000000000000003639 106.0
BYD3_k127_830168_12 - - - - 0.000000000000000000004018 106.0
BYD3_k127_830168_2 ABC transporter K09697 - 3.6.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 346.0
BYD3_k127_830168_3 sodium ABC transporter, permease K09696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 314.0
BYD3_k127_830168_4 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 307.0
BYD3_k127_830168_5 RNA polymerase recycling family C-terminal K03580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006 309.0
BYD3_k127_830168_6 dna ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004579 285.0
BYD3_k127_830168_7 COG1943 Transposase and inactivated derivatives K07491 - - 0.00000000000000000000000000000000000000000000000000003981 195.0
BYD3_k127_830168_8 Domain of unknown function (DUF892) - - - 0.0000000000000000000000000000000000000000000002044 175.0
BYD3_k127_830168_9 Transcriptional regulator K22293 - - 0.000000000000000000000000000000000002188 148.0
BYD3_k127_8371526_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 491.0
BYD3_k127_8371526_1 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004349 331.0
BYD3_k127_8371526_2 SnoaL-like domain - - - 0.00000000000000000000000000000000182 130.0
BYD3_k127_8433913_0 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 1.086e-224 713.0
BYD3_k127_8433913_1 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 586.0
BYD3_k127_8433913_10 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009574 353.0
BYD3_k127_8433913_11 C-terminus of AA_permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 351.0
BYD3_k127_8433913_12 PLD-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 312.0
BYD3_k127_8433913_13 Heparinase II/III N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006452 313.0
BYD3_k127_8433913_14 transferase activity, transferring glycosyl groups K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003523 286.0
BYD3_k127_8433913_15 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004842 280.0
BYD3_k127_8433913_16 glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000105 285.0
BYD3_k127_8433913_17 COG0223 Methionyl-tRNA formyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004085 259.0
BYD3_k127_8433913_18 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001488 258.0
BYD3_k127_8433913_19 inositol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000001079 231.0
BYD3_k127_8433913_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00066 - 1.1.1.132 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 543.0
BYD3_k127_8433913_20 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000001626 238.0
BYD3_k127_8433913_21 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000001472 228.0
BYD3_k127_8433913_22 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000008427 214.0
BYD3_k127_8433913_23 Glycosyl transferase group 2 family protein - - - 0.00000000000000000000000000000000000000000000000000000001015 206.0
BYD3_k127_8433913_24 Heparinase II/III N-terminus - - - 0.0000000000000000000000000000000000000000000000000000004533 220.0
BYD3_k127_8433913_25 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.000000000000000000000000000000000000000000000000001028 192.0
BYD3_k127_8433913_26 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000001223 196.0
BYD3_k127_8433913_27 Protein involved in cellulose biosynthesis - - - 0.0000000000000000000000000000000000000000007909 178.0
BYD3_k127_8433913_28 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000009795 174.0
BYD3_k127_8433913_29 PFAM Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000001605 172.0
BYD3_k127_8433913_3 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 548.0
BYD3_k127_8433913_30 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000004107 170.0
BYD3_k127_8433913_31 Capsular exopolysaccharide family K08252 - 2.7.10.1 0.00000000000000000000000000000000000002021 153.0
BYD3_k127_8433913_32 antitermination protein NusG K05785 - - 0.00000000000000000000000000000001531 132.0
BYD3_k127_8433913_33 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000002419 132.0
BYD3_k127_8433913_34 cheY-homologous receiver domain - - - 0.0000000000000000000000000004593 118.0
BYD3_k127_8433913_35 - - - - 0.00000000000000000000000002798 113.0
BYD3_k127_8433913_36 metal cluster binding - - - 0.0000000000000000000000000459 116.0
BYD3_k127_8433913_37 G-rich domain on putative tyrosine kinase - - - 0.0000000000000000000000006166 121.0
BYD3_k127_8433913_38 SET domain K07117 - - 0.000000000000000000000001328 109.0
BYD3_k127_8433913_39 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000003841 113.0
BYD3_k127_8433913_4 PFAM asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 539.0
BYD3_k127_8433913_40 Response regulator, receiver - - - 0.000000000000000000000007139 106.0
BYD3_k127_8433913_41 - - - - 0.000000000000000000003896 105.0
BYD3_k127_8433913_42 O-Antigen ligase K02847 - - 0.0000000000000000001206 105.0
BYD3_k127_8433913_44 - - - - 0.0000000000000000009225 92.0
BYD3_k127_8433913_45 - - - - 0.000000000000000003616 98.0
BYD3_k127_8433913_46 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000334 97.0
BYD3_k127_8433913_47 Integral membrane sensor signal transduction histidine kinase - - - 0.0000000000000005606 87.0
BYD3_k127_8433913_48 - - - - 0.00000000000002181 77.0
BYD3_k127_8433913_49 PAP2 superfamily - - - 0.000000000008049 69.0
BYD3_k127_8433913_5 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 451.0
BYD3_k127_8433913_50 COG0346 Lactoylglutathione lyase and related lyases - - - 0.00000000001495 73.0
BYD3_k127_8433913_51 Acetyltransferase (GNAT) domain - - - 0.000003445 59.0
BYD3_k127_8433913_6 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006749 450.0
BYD3_k127_8433913_7 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 420.0
BYD3_k127_8433913_8 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 398.0
BYD3_k127_8433913_9 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003849 403.0
BYD3_k127_8437052_0 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 559.0
BYD3_k127_8437052_1 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 363.0
BYD3_k127_8437052_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 322.0
BYD3_k127_8437052_3 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000002601 234.0
BYD3_k127_8437052_4 - - - - 0.0000000000000000000000000000000000008272 149.0
BYD3_k127_8437052_5 Alpha-L-arabinofuranosidase B, catalytic - - - 0.0000000000000000000000000001441 117.0
BYD3_k127_8452036_0 Alpha amylase, catalytic domain K01176,K01236 - 3.2.1.1,3.2.1.141 7.151e-207 661.0
BYD3_k127_8452036_1 alpha amylase catalytic K01182,K05343 - 3.2.1.1,3.2.1.10,5.4.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 601.0
BYD3_k127_8452036_2 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 410.0
BYD3_k127_8452036_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 292.0
BYD3_k127_8452036_4 protein conserved in bacteria - - - 0.000000000000000000000000000000000001321 146.0
BYD3_k127_8452036_5 TonB-dependent receptor K02014 - - 0.0000004281 61.0
BYD3_k127_8452036_6 Protein of unknown function (DUF2934) - - - 0.000607 47.0
BYD3_k127_8488096_0 PFAM Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000223 186.0
BYD3_k127_8488096_1 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000001483 203.0
BYD3_k127_8488096_2 Tetratricopeptide repeat - - - 0.00000000009615 69.0
BYD3_k127_8544841_0 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006491 590.0
BYD3_k127_8544841_1 Pirin C-terminal cupin domain K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 485.0
BYD3_k127_8544841_10 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000001855 222.0
BYD3_k127_8544841_11 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.000000000000000000000000000000000001238 145.0
BYD3_k127_8544841_12 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000009961 128.0
BYD3_k127_8544841_13 PFAM ATP-binding region, ATPase domain protein domain protein - - - 0.00000000000000000000000000002302 132.0
BYD3_k127_8544841_14 PFAM Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.00000000000000000000000000004621 118.0
BYD3_k127_8544841_15 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07776 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009405,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0031323,GO:0031326,GO:0044419,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0080134,GO:0097159,GO:1901363,GO:1902882,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000008044 83.0
BYD3_k127_8544841_16 PFAM PEGA domain - - - 0.00000004258 64.0
BYD3_k127_8544841_2 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 492.0
BYD3_k127_8544841_3 PFAM NAD dependent epimerase dehydratase family K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 466.0
BYD3_k127_8544841_4 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 445.0
BYD3_k127_8544841_5 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 404.0
BYD3_k127_8544841_6 Ankyrin repeats (many copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 334.0
BYD3_k127_8544841_7 glucose sorbosone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 321.0
BYD3_k127_8544841_8 Bacillithiol biosynthesis BshC K22136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 309.0
BYD3_k127_8544841_9 XdhC and CoxI family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000007711 219.0
BYD3_k127_8681347_0 Domain of unknown function (DUF1998) K06877 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 1.736e-280 885.0
BYD3_k127_8681347_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.521e-264 825.0
BYD3_k127_8681347_10 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001138 279.0
BYD3_k127_8681347_11 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000007168 259.0
BYD3_k127_8681347_12 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000616 241.0
BYD3_k127_8681347_13 Exonuclease K07502 - - 0.0000000000000000000000000000000000000000000000000000007176 212.0
BYD3_k127_8681347_14 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000000652 188.0
BYD3_k127_8681347_15 rRNA (adenine-N6,N6-)-dimethyltransferase activity K02528,K20444 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.00000000000000000000000000000000000000007856 164.0
BYD3_k127_8681347_16 4TM region of pyridine nucleotide transhydrogenase, mitoch K00322,K00324 - 1.6.1.1,1.6.1.2 0.00000000000000000000000000000000002586 138.0
BYD3_k127_8681347_17 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000003425 139.0
BYD3_k127_8681347_18 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000002817 120.0
BYD3_k127_8681347_19 Probably functions as a manganese efflux pump - - - 0.000000000000000000000000007403 128.0
BYD3_k127_8681347_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.081e-218 683.0
BYD3_k127_8681347_20 - - - - 0.0000000000001291 79.0
BYD3_k127_8681347_21 O-Antigen ligase - - - 0.00000001076 68.0
BYD3_k127_8681347_3 Alcohol dehydrogenase GroES domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 605.0
BYD3_k127_8681347_4 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 490.0
BYD3_k127_8681347_5 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 428.0
BYD3_k127_8681347_6 Cys/Met metabolism PLP-dependent enzyme K01758 - 4.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007771 386.0
BYD3_k127_8681347_7 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 354.0
BYD3_k127_8681347_8 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 351.0
BYD3_k127_8681347_9 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 316.0
BYD3_k127_8723385_0 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 462.0
BYD3_k127_8723385_1 Peptidase, M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 439.0
BYD3_k127_8723385_10 glycerophosphodiester phosphodiesterase activity K01126 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008081,GO:0008889,GO:0009279,GO:0016020,GO:0016787,GO:0016788,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044462,GO:0044464,GO:0046872,GO:0071944 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000806 263.0
BYD3_k127_8723385_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001533 248.0
BYD3_k127_8723385_12 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000000000000000006795 211.0
BYD3_k127_8723385_13 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000002576 232.0
BYD3_k127_8723385_14 COG3857 ATP-dependent nuclease, subunit B K16899 - 3.6.4.12 0.0000000000000000000000000000000000003951 163.0
BYD3_k127_8723385_15 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000001142 150.0
BYD3_k127_8723385_16 DNA repair - GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0032259,GO:0034641,GO:0036260,GO:0036261,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071164,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.000000000000000000000002813 112.0
BYD3_k127_8723385_17 GIY-YIG catalytic domain - - - 0.000000000000000000001978 98.0
BYD3_k127_8723385_18 FMN_bind - - - 0.00000000000000000000952 99.0
BYD3_k127_8723385_19 - - - - 0.0000001609 59.0
BYD3_k127_8723385_2 conserved protein UCP016719 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 404.0
BYD3_k127_8723385_20 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000003469 58.0
BYD3_k127_8723385_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 383.0
BYD3_k127_8723385_4 Belongs to the pyruvate kinase family K00873 GO:0003674,GO:0003824,GO:0004743,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 364.0
BYD3_k127_8723385_5 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005346 341.0
BYD3_k127_8723385_6 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 330.0
BYD3_k127_8723385_7 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 322.0
BYD3_k127_8723385_8 PFAM Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 309.0
BYD3_k127_8723385_9 - K12065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002747 293.0
BYD3_k127_8726174_0 tail sheath protein K06907 - - 3.825e-212 686.0
BYD3_k127_8726174_1 homolog of phage Mu protein gp47 - - - 6.146e-212 683.0
BYD3_k127_8726174_10 Phage late control gene D protein (GPD) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005698 380.0
BYD3_k127_8726174_11 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008055 372.0
BYD3_k127_8726174_12 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 315.0
BYD3_k127_8726174_13 tail sheath protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 323.0
BYD3_k127_8726174_14 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007072 302.0
BYD3_k127_8726174_15 Rhs Element Vgr Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 286.0
BYD3_k127_8726174_16 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K02003,K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000382 274.0
BYD3_k127_8726174_17 TIGRFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000002861 203.0
BYD3_k127_8726174_18 peptidoglycan biosynthetic process - - - 0.0000000000000000000000000000000000000000000002996 185.0
BYD3_k127_8726174_19 helicase superfamily c-terminal domain - - - 0.000000000000000000000000000000000000000000001148 172.0
BYD3_k127_8726174_2 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 610.0
BYD3_k127_8726174_20 Protein of unknown function (DUF4255) - - - 0.000000000000000000000000000000000000000000004675 170.0
BYD3_k127_8726174_21 - - - - 0.00000000000000000000000000000000000000000007772 171.0
BYD3_k127_8726174_22 LysM domain - - - 0.0000000000000000000000000000000000000002391 164.0
BYD3_k127_8726174_23 - K06903 - - 0.000000000000000000000000000000000000001099 151.0
BYD3_k127_8726174_24 TIGRFAM conserved - - - 0.000000000000000000000000000000000000002825 160.0
BYD3_k127_8726174_25 chlorophyll binding - - - 0.00000000000000000000000000000000001875 144.0
BYD3_k127_8726174_26 Helicase conserved C-terminal domain - - - 0.0000000000000000000000000000000005997 141.0
BYD3_k127_8726174_27 - - - - 0.00000000000000000000002632 115.0
BYD3_k127_8726174_28 Domain of unknown function (DUF4172) - - - 0.00000000000000000000004112 102.0
BYD3_k127_8726174_29 - - - - 0.00000000000000001083 87.0
BYD3_k127_8726174_3 PFAM filamentation induced by cAMP protein Fic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006763 576.0
BYD3_k127_8726174_30 PFAM pentapeptide repeat protein - - - 0.0000000000001906 83.0
BYD3_k127_8726174_31 - - - - 0.0000000006944 63.0
BYD3_k127_8726174_32 Domain of unknown function (DUF3427) - - - 0.0000009014 58.0
BYD3_k127_8726174_33 Major Facilitator Superfamily - - - 0.00001965 48.0
BYD3_k127_8726174_34 helicase - - - 0.00006551 49.0
BYD3_k127_8726174_35 response to abiotic stimulus K06867 - - 0.0000917 51.0
BYD3_k127_8726174_36 - - - - 0.0001353 49.0
BYD3_k127_8726174_4 MacB-like periplasmic core domain K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004241 558.0
BYD3_k127_8726174_5 Phage tail protein (Tail_P2_I) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000713 541.0
BYD3_k127_8726174_6 Domain of unknown function (DUF4157) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 530.0
BYD3_k127_8726174_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 457.0
BYD3_k127_8726174_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005126 451.0
BYD3_k127_8726174_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007437 441.0
BYD3_k127_8751262_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005868 278.0
BYD3_k127_8751262_1 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001698 246.0
BYD3_k127_8751262_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000001139 136.0
BYD3_k127_8751262_3 - - - - 0.000000000000000000003915 106.0
BYD3_k127_8751262_4 - - - - 0.000000000000000000006554 102.0
BYD3_k127_8776306_0 homoserine dehydrogenase K12524 - 1.1.1.3,2.7.2.4 8.576e-263 834.0
BYD3_k127_8776306_1 Phosphoadenosine phosphosulfate reductase family K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 482.0
BYD3_k127_8776306_2 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00956 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 466.0
BYD3_k127_8776306_3 Belongs to the PAPS reductase family. CysH subfamily K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000001167 253.0
BYD3_k127_8776306_4 AMP-dependent synthetase and ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002511 249.0
BYD3_k127_8776306_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000003067 242.0
BYD3_k127_8776306_6 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000000000000000000000001944 240.0
BYD3_k127_8776306_7 Penicillinase repressor - - - 0.000000000000000000000000000000000000001862 151.0
BYD3_k127_8776306_8 deoxyhypusine monooxygenase activity K01256,K01387 - 3.4.11.2,3.4.24.3 0.00000000000000000000000002365 127.0
BYD3_k127_8776306_9 lysine biosynthetic process via aminoadipic acid - - - 0.000000000001309 72.0
BYD3_k127_8842177_0 lysine biosynthetic process via aminoadipic acid - - - 3.829e-210 692.0
BYD3_k127_8842177_1 ATP dependent DNA ligase C terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 514.0
BYD3_k127_8842177_10 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000002318 265.0
BYD3_k127_8842177_11 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002322 271.0
BYD3_k127_8842177_12 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000001559 251.0
BYD3_k127_8842177_13 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000004762 233.0
BYD3_k127_8842177_14 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000005321 179.0
BYD3_k127_8842177_15 - - - - 0.00000000000000000000000000000000000000000000003174 179.0
BYD3_k127_8842177_16 - - - - 0.000000000000000000000000000000000003217 156.0
BYD3_k127_8842177_17 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000005131 152.0
BYD3_k127_8842177_18 - - - - 0.0000000000000000000000000000006063 137.0
BYD3_k127_8842177_19 - - - - 0.000000000000000000000000000003502 124.0
BYD3_k127_8842177_2 Dynamin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 505.0
BYD3_k127_8842177_20 - - - - 0.000000000000000000000000000004133 124.0
BYD3_k127_8842177_21 - - - - 0.0000000000000000000000000005626 127.0
BYD3_k127_8842177_22 - - - - 0.00000000000000000000002724 111.0
BYD3_k127_8842177_23 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000008923 99.0
BYD3_k127_8842177_24 Sporulation and spore germination - - - 0.00000000000000001455 93.0
BYD3_k127_8842177_25 - - - - 0.0000000000000109 79.0
BYD3_k127_8842177_26 Peptidyl-prolyl cis-trans isomerase K01802,K03772,K03773 - 5.2.1.8 0.00000000002265 64.0
BYD3_k127_8842177_27 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000009249 74.0
BYD3_k127_8842177_28 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0000000003755 69.0
BYD3_k127_8842177_29 Cellulose synthase operon protein C C-terminus (BCSC_C) K20543 - - 0.000000001131 70.0
BYD3_k127_8842177_3 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 454.0
BYD3_k127_8842177_30 methyltransferase - - - 0.00000001341 66.0
BYD3_k127_8842177_31 - - - - 0.000000147 58.0
BYD3_k127_8842177_32 CHRD domain - - - 0.0000006038 58.0
BYD3_k127_8842177_33 glutamate synthase - - - 0.0000008146 58.0
BYD3_k127_8842177_4 Pantothenic acid kinase K00867 GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 423.0
BYD3_k127_8842177_5 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004463 372.0
BYD3_k127_8842177_6 enterobactin catabolic process K00700,K07214,K16147 - 2.4.1.18,2.4.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 329.0
BYD3_k127_8842177_7 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 317.0
BYD3_k127_8842177_8 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 300.0
BYD3_k127_8842177_9 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003856 279.0
BYD3_k127_8862373_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006501 465.0
BYD3_k127_8862373_1 Phage tail tape measure protein TP901 - - - 0.00008145 53.0
BYD3_k127_8887528_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 389.0
BYD3_k127_8887528_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000003975 164.0
BYD3_k127_8887528_2 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000007927 156.0
BYD3_k127_8887528_3 response to abiotic stimulus - - - 0.000000000000000000000000000000002946 131.0
BYD3_k127_8887528_4 efflux transmembrane transporter activity - - - 0.00000002322 58.0
BYD3_k127_8887528_5 serine-type D-Ala-D-Ala carboxypeptidase activity K07259 - 3.4.16.4 0.0000008513 59.0
BYD3_k127_8979555_0 Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007857 378.0
BYD3_k127_8979555_1 Bacterial transcriptional regulator K13641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002554 257.0
BYD3_k127_8979555_2 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000007599 221.0
BYD3_k127_937774_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.0 1219.0
BYD3_k127_937774_1 Spermine/spermidine synthase domain - - - 1.278e-264 838.0
BYD3_k127_937774_10 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 391.0
BYD3_k127_937774_11 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 372.0
BYD3_k127_937774_12 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 374.0
BYD3_k127_937774_13 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009812 345.0
BYD3_k127_937774_14 Chromate transporter K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003524 315.0
BYD3_k127_937774_15 EamA-like transporter family K05786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007198 284.0
BYD3_k127_937774_16 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K14161 - - 0.00000000000000000000000000000000000000000000000000000000000000003676 243.0
BYD3_k127_937774_17 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000004002 231.0
BYD3_k127_937774_18 Glycosyl transferase family 1 - - - 0.000000000000000000000000000000000000000000000000000000000000008837 235.0
BYD3_k127_937774_19 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000000000000000000000000687 207.0
BYD3_k127_937774_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.546e-251 799.0
BYD3_k127_937774_20 transcriptional regulator PadR family - - - 0.0000000000000000000000000000000000000000000000000002743 186.0
BYD3_k127_937774_21 Lipid kinase - - - 0.00000000000000000000000000000000000000000000000003793 190.0
BYD3_k127_937774_22 Glucose inhibited division protein A K21401 - 1.3.99.38 0.000000000000000000000000000000000000000000002228 179.0
BYD3_k127_937774_23 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000006976 172.0
BYD3_k127_937774_24 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000005342 158.0
BYD3_k127_937774_25 oligosaccharyl transferase activity - - - 0.00000000000000000000000000000000000000003745 173.0
BYD3_k127_937774_26 PFAM Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000003956 155.0
BYD3_k127_937774_27 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000000002739 157.0
BYD3_k127_937774_28 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000001725 145.0
BYD3_k127_937774_29 Phospholipid methyltransferase K21310 - 2.1.1.334 0.00000000000000000000000000000006333 134.0
BYD3_k127_937774_3 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.956e-210 661.0
BYD3_k127_937774_30 Isoprenylcysteine carboxyl methyltransferase K16168 - - 0.0000000000000000000000002512 111.0
BYD3_k127_937774_31 PFAM Rhomboid family protein - - - 0.0000000000000000000000009538 111.0
BYD3_k127_937774_32 Phosphohistidine phosphatase, SixA K08296 - - 0.00000000000000000000007993 108.0
BYD3_k127_937774_33 - - - - 0.00000000000000000682 87.0
BYD3_k127_937774_34 - - - - 0.00000000000000003862 89.0
BYD3_k127_937774_35 Surface antigen - - - 0.0000000000000001349 92.0
BYD3_k127_937774_36 recA bacterial DNA recombination protein - - - 0.0000000000000006677 87.0
BYD3_k127_937774_37 - - - - 0.000000000000002509 88.0
BYD3_k127_937774_38 - - - - 0.0000000000002886 75.0
BYD3_k127_937774_39 PFAM CHAD domain containing protein - - - 0.0000000000008397 79.0
BYD3_k127_937774_4 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 499.0
BYD3_k127_937774_40 methyltransferase activity K21310 - 2.1.1.334 0.000000000006471 72.0
BYD3_k127_937774_41 - - - - 0.000000000009094 78.0
BYD3_k127_937774_42 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000001284 68.0
BYD3_k127_937774_43 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000001557 57.0
BYD3_k127_937774_44 - - - - 0.0004048 53.0
BYD3_k127_937774_5 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 494.0
BYD3_k127_937774_6 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 451.0
BYD3_k127_937774_7 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003185 436.0
BYD3_k127_937774_8 PFAM phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 398.0
BYD3_k127_937774_9 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 391.0
BYD3_k127_982439_0 - - - - 0.0000000000000000003454 98.0
BYD3_k127_982439_1 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.0000003974 62.0
BYD3_k127_995390_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 438.0
BYD3_k127_995390_1 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 379.0
BYD3_k127_995390_10 Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane K12963 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0010035,GO:0010038,GO:0010039,GO:0010041,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0042221,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.00003125 52.0
BYD3_k127_995390_2 PFAM 2Fe-2S -binding - - - 0.00000000000000000000000000000000000000000000000000000000000000002587 226.0
BYD3_k127_995390_3 glyoxalase III activity K02005 - - 0.00000000000000000000000000000000000000000000000000001659 198.0
BYD3_k127_995390_4 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000007422 180.0
BYD3_k127_995390_5 - - - - 0.000000000000000000000000000000000000000000007061 176.0
BYD3_k127_995390_6 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000007373 162.0
BYD3_k127_995390_7 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000003258 152.0
BYD3_k127_995390_8 - - - - 0.00000000000000000000000209 103.0
BYD3_k127_995390_9 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000003751 112.0