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Overview

ID MAG00121
Name BYD3_bin.34
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Gemmatimonadota
Class Gemmatimonadetes
Order Longimicrobiales
Family UBA6960
Genus UBA2982
Species
Assembly information
Completeness (%) 92.34
Contamination (%) 3.96
GC content (%) 68.0
N50 (bp) 24,331
Genome size (bp) 3,934,612

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3264

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1000014_0 Peptidase family M3 K01414 - 3.4.24.70 3.303e-198 634.0
BYD3_k127_1000014_1 cation diffusion facilitator family transporter K16264 GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004716 301.0
BYD3_k127_1000014_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000001739 261.0
BYD3_k127_1000014_3 Domain of unknown function (DUF1949) - - - 0.00000000000000000000000000000000000000000000000000000000159 218.0
BYD3_k127_1000014_5 Eukaryotic integral membrane protein (DUF1751) K09650 - 3.4.21.105 0.00000000000000000000000000000000003829 144.0
BYD3_k127_1000809_0 AcrB/AcrD/AcrF family K07787,K15726 - - 0.0 1411.0
BYD3_k127_1000809_1 PFAM FAD linked oxidase domain protein - - - 9.295e-246 769.0
BYD3_k127_1000809_10 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 334.0
BYD3_k127_1000809_11 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 336.0
BYD3_k127_1000809_12 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006147 334.0
BYD3_k127_1000809_13 2-keto-3-deoxy-L-rhamnonate aldolase activity K02510 - 4.1.2.52 0.000000000000000000000000000000000000000000000000000000000000000000000008091 253.0
BYD3_k127_1000809_14 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008781 242.0
BYD3_k127_1000809_15 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000823 244.0
BYD3_k127_1000809_16 Bacterial protein of unknown function (DUF937) - - - 0.000000000000000000000000000000000000000000000000000000000000001088 225.0
BYD3_k127_1000809_17 Domain of unknown function (DUF305) - - - 0.000000000000000000000000000000000000000000001145 173.0
BYD3_k127_1000809_18 - - - - 0.000000000000000000000000000000000000000000004136 177.0
BYD3_k127_1000809_19 - - - - 0.0000000000000000000000000000000000000000003739 163.0
BYD3_k127_1000809_2 Prolyl oligopeptidase family - - - 2.673e-230 746.0
BYD3_k127_1000809_20 Peptidoglycan-binding LysM - - - 0.00000000000000000000000000000000000000001669 158.0
BYD3_k127_1000809_21 NmrA-like family - - - 0.00000000000000000000000000002786 136.0
BYD3_k127_1000809_22 double-strand break repair K09946 GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000004002 115.0
BYD3_k127_1000809_23 Cytochrome c - - - 0.00000000000000000000001626 108.0
BYD3_k127_1000809_24 Tetratricopeptide repeat - - - 0.00000000000000000001796 100.0
BYD3_k127_1000809_25 - - - - 0.000008977 56.0
BYD3_k127_1000809_26 metal cluster binding - - - 0.0005507 48.0
BYD3_k127_1000809_3 LVIVD repeat - - - 2.75e-216 701.0
BYD3_k127_1000809_4 PQQ-like domain K00117 - 1.1.5.2 1.001e-197 636.0
BYD3_k127_1000809_5 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005786 549.0
BYD3_k127_1000809_6 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 544.0
BYD3_k127_1000809_7 Amino acid permease K11733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 464.0
BYD3_k127_1000809_8 Dehydrogenase K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009582 473.0
BYD3_k127_1000809_9 TIGRFAM PQQ-dependent dehydrogenase, methanol ethanol family K00114 - 1.1.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 433.0
BYD3_k127_1014145_0 - - - - 1.568e-231 744.0
BYD3_k127_1014145_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000734 552.0
BYD3_k127_1014145_11 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000162 55.0
BYD3_k127_1014145_2 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 408.0
BYD3_k127_1014145_3 Protein of unknown function (DUF3500) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004274 286.0
BYD3_k127_1014145_4 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000924 196.0
BYD3_k127_1014145_5 peroxiredoxin activity - - - 0.00000000000000000000000000000000000000000000000007249 203.0
BYD3_k127_1014145_6 Prokaryotic cytochrome b561 K12262 - - 0.000000000000000000000000000000000000000006367 164.0
BYD3_k127_1014145_7 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000002018 108.0
BYD3_k127_1014145_8 - - - - 0.0000000000000000000007092 100.0
BYD3_k127_1014145_9 Biopolymer transport protein ExbD/TolR K03560 - - 0.00000000000000000001784 95.0
BYD3_k127_1160114_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 3.544e-197 631.0
BYD3_k127_1160114_1 membrane organization - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000834 549.0
BYD3_k127_1160114_10 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000001329 144.0
BYD3_k127_1160114_11 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000004616 149.0
BYD3_k127_1160114_13 energy transducer activity K03832 - - 0.00003046 49.0
BYD3_k127_1160114_14 repeat-containing protein - - - 0.0005488 52.0
BYD3_k127_1160114_2 Polysaccharide biosynthesis protein K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006689 410.0
BYD3_k127_1160114_3 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K09698 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0009986,GO:0030246,GO:0030247,GO:0044464,GO:2001065 6.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 387.0
BYD3_k127_1160114_4 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002188 246.0
BYD3_k127_1160114_5 trisaccharide binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004116 247.0
BYD3_k127_1160114_6 Bacillithiol biosynthesis BshC K22136 - - 0.000000000000000000000000000000000000000000000000000000000000002656 239.0
BYD3_k127_1160114_7 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000002477 170.0
BYD3_k127_1160114_8 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000009603 164.0
BYD3_k127_1160114_9 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000000000000236 156.0
BYD3_k127_1170674_0 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 342.0
BYD3_k127_1170674_1 Saccharopine dehydrogenase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 291.0
BYD3_k127_1170674_2 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000001772 231.0
BYD3_k127_1170674_3 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000004364 133.0
BYD3_k127_1170674_4 von Willebrand factor type A domain K07114 - - 0.000008293 58.0
BYD3_k127_117917_0 Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000894 547.0
BYD3_k127_117917_1 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 466.0
BYD3_k127_117917_2 Cellulose biosynthesis protein BcsQ K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006915 339.0
BYD3_k127_117917_3 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000002015 243.0
BYD3_k127_117917_4 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000000000000000000000000000000000000000007344 217.0
BYD3_k127_117917_5 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000001922 115.0
BYD3_k127_117917_6 Polymer-forming cytoskeletal - - - 0.000000000000003125 82.0
BYD3_k127_1179781_0 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006038 389.0
BYD3_k127_1179781_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004578 341.0
BYD3_k127_1179781_2 Peptidase family S51 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 306.0
BYD3_k127_1179781_3 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009682 298.0
BYD3_k127_1179781_4 Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily K01911 - 6.2.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000004253 269.0
BYD3_k127_1179781_5 water channel activity K02440,K06188 - - 0.0000000000000000000000000000000000000000000000000000006428 200.0
BYD3_k127_1179781_6 - - - - 0.00000000000000000000000000000000007713 141.0
BYD3_k127_1179781_7 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000000000000000000000000000371 125.0
BYD3_k127_1179781_8 Putative stress-induced transcription regulator - - - 0.00000000000000000000003746 106.0
BYD3_k127_1179781_9 methylated DNA-protein cysteine methyltransferase K07443 - - 0.000000000000000001815 93.0
BYD3_k127_1190720_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 524.0
BYD3_k127_1190720_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 514.0
BYD3_k127_1190720_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 376.0
BYD3_k127_1190720_3 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 294.0
BYD3_k127_1210876_0 Hydantoinase B/oxoprolinase - - - 3.338e-283 888.0
BYD3_k127_1210876_1 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 4.187e-229 735.0
BYD3_k127_1210876_10 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000517 153.0
BYD3_k127_1210876_11 DGC domain - - - 0.0000000000000000000000000000000001493 136.0
BYD3_k127_1210876_13 SnoaL-like polyketide cyclase - - - 0.00000000000000000004118 98.0
BYD3_k127_1210876_14 - - - - 0.000000000000000002431 95.0
BYD3_k127_1210876_15 - - - - 0.000000000000000005331 91.0
BYD3_k127_1210876_16 COG0508 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - - - 0.0000000000000003741 88.0
BYD3_k127_1210876_17 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.0000000000000004041 87.0
BYD3_k127_1210876_18 - - - - 0.000000000101 74.0
BYD3_k127_1210876_19 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000001124 66.0
BYD3_k127_1210876_2 GAF domain K21405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 589.0
BYD3_k127_1210876_20 YjbR - - - 0.000000336 61.0
BYD3_k127_1210876_22 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 0.00008055 46.0
BYD3_k127_1210876_23 YjbR - - - 0.0003476 48.0
BYD3_k127_1210876_25 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K00663,K03790 - 2.3.1.128,2.3.1.82 0.0006667 44.0
BYD3_k127_1210876_3 AMP-binding enzyme C-terminal domain K00666,K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006178 577.0
BYD3_k127_1210876_4 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005276 500.0
BYD3_k127_1210876_5 WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003499 451.0
BYD3_k127_1210876_6 Hydantoinase/oxoprolinase N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 424.0
BYD3_k127_1210876_7 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000002189 225.0
BYD3_k127_1210876_8 Acetone carboxylase gamma subunit - - - 0.0000000000000000000000000000000000000000007715 160.0
BYD3_k127_1210876_9 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000005089 155.0
BYD3_k127_1274472_0 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039 349.0
BYD3_k127_1274472_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 365.0
BYD3_k127_1274472_2 TIGRFAM sulfate ABC transporter K02047 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002748 286.0
BYD3_k127_1274472_3 transport system involved in gliding motility, auxiliary component - - - 0.00000000000001138 82.0
BYD3_k127_1274472_4 Transcriptional regulator PadR-like family - - - 0.0000000000002422 74.0
BYD3_k127_1303258_0 transmembrane transporter activity K18138 - - 0.0 1561.0
BYD3_k127_1303258_1 RecQ zinc-binding K03654 - 3.6.4.12 1.724e-217 689.0
BYD3_k127_1303258_10 Mo-co oxidoreductase dimerisation domain K17225 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 349.0
BYD3_k127_1303258_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 344.0
BYD3_k127_1303258_12 Dimerisation domain of Zinc Transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 336.0
BYD3_k127_1303258_13 PFAM Prenyltransferase squalene oxidase K06045 - 4.2.1.129,5.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004548 341.0
BYD3_k127_1303258_14 Belongs to the ABC transporter superfamily K10112 GO:0006810,GO:0008150,GO:0008643,GO:0009405,GO:0015766,GO:0015771,GO:0015772,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044403,GO:0044419,GO:0051179,GO:0051234,GO:0051704,GO:0071702 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 325.0
BYD3_k127_1303258_15 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 301.0
BYD3_k127_1303258_16 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 285.0
BYD3_k127_1303258_17 PFAM extracellular solute-binding protein family 1 K02027,K10236 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005072 297.0
BYD3_k127_1303258_18 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001731 303.0
BYD3_k127_1303258_19 Ankyrin repeats (many copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001562 273.0
BYD3_k127_1303258_2 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009913 604.0
BYD3_k127_1303258_20 PFAM binding-protein-dependent transport systems inner membrane component K02025,K10237 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001327 258.0
BYD3_k127_1303258_21 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001324 258.0
BYD3_k127_1303258_22 Binding-protein-dependent transport system inner membrane component K02026,K10238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007047 256.0
BYD3_k127_1303258_23 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000000000000000000000000000000000000000000000000000000000000000001323 231.0
BYD3_k127_1303258_24 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000001398 235.0
BYD3_k127_1303258_25 Protoglobin - - - 0.000000000000000000000000000000000000000000000000000000000006439 220.0
BYD3_k127_1303258_26 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000005362 192.0
BYD3_k127_1303258_27 Serine hydrolase involved in the detoxification of formaldehyde K01181 - 3.2.1.8 0.000000000000000000000000000000000000000000000003395 186.0
BYD3_k127_1303258_28 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000001725 178.0
BYD3_k127_1303258_29 Methyltransferase type 12 - - - 0.000000000000000000000000000000000000000000001167 175.0
BYD3_k127_1303258_3 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 579.0
BYD3_k127_1303258_30 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000002407 179.0
BYD3_k127_1303258_31 Short C-terminal domain - - - 0.0000000000000000000000000000000000001468 151.0
BYD3_k127_1303258_33 Protein of unknown function (DUF3303) - - - 0.0000000000000000000000000000000006562 134.0
BYD3_k127_1303258_34 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.000000000000000000000000000000008974 134.0
BYD3_k127_1303258_35 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000004597 131.0
BYD3_k127_1303258_36 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000004502 132.0
BYD3_k127_1303258_37 Cold shock K03704 - - 0.00000000000000000000000000000322 120.0
BYD3_k127_1303258_38 Putative thioesterase (yiiD_Cterm) - - - 0.000000000000000000000000000007217 130.0
BYD3_k127_1303258_39 Domain of unknown function (DU1801) K05937 - - 0.0000000000000000000000000002506 125.0
BYD3_k127_1303258_4 ATP dependent DNA ligase C terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005659 512.0
BYD3_k127_1303258_40 Glyoxalase-like domain K08234 - - 0.0000000000000000000000000002532 127.0
BYD3_k127_1303258_41 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000004589 116.0
BYD3_k127_1303258_42 membrane K08972 - - 0.00000000000000000000000003239 111.0
BYD3_k127_1303258_43 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000008488 108.0
BYD3_k127_1303258_44 - - - - 0.000000000000000000000000884 108.0
BYD3_k127_1303258_45 - - - - 0.00000000000000000000002272 111.0
BYD3_k127_1303258_46 TRANSCRIPTIONal - - - 0.000000000000000000005622 101.0
BYD3_k127_1303258_48 Glyoxalase-like domain K08234 - - 0.0000000000004198 72.0
BYD3_k127_1303258_49 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000005234 69.0
BYD3_k127_1303258_5 COG0277 FAD FMN-containing dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005889 496.0
BYD3_k127_1303258_51 OprF membrane domain K03286 - - 0.000000004842 66.0
BYD3_k127_1303258_52 OsmC-like protein K07397,K19000 - - 0.00000001249 59.0
BYD3_k127_1303258_53 Lipocalin-like domain - - - 0.00000001271 63.0
BYD3_k127_1303258_54 Trypsin-like serine protease - - - 0.00000007173 63.0
BYD3_k127_1303258_55 Protein of unknown function (DUF1697) - - - 0.000001238 59.0
BYD3_k127_1303258_6 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003544 422.0
BYD3_k127_1303258_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005493 373.0
BYD3_k127_1303258_8 efflux transmembrane transporter activity K18300,K18308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 368.0
BYD3_k127_1303258_9 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 378.0
BYD3_k127_13401_0 PFAM Rh family protein ammonium transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 552.0
BYD3_k127_13401_1 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.000000000000000000000000000000000000000000000000000000000008617 222.0
BYD3_k127_13401_2 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000007157 178.0
BYD3_k127_13401_3 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000000003081 170.0
BYD3_k127_13401_4 transcription factor binding K02584 - - 0.00000000000000000000000003317 109.0
BYD3_k127_1341363_0 Isocitrate dehydrogenase NADP-dependent, monomeric type K00031 - 1.1.1.42 0.0 1054.0
BYD3_k127_1341363_1 lysine biosynthetic process via aminoadipic acid - - - 1.955e-206 677.0
BYD3_k127_1341363_10 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000003496 225.0
BYD3_k127_1341363_11 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000003425 211.0
BYD3_k127_1341363_12 Domain of unknown function (DUF1732) - - - 0.000000000000000000000000000000000000000000000000000000002531 213.0
BYD3_k127_1341363_13 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000003141 203.0
BYD3_k127_1341363_14 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000001739 203.0
BYD3_k127_1341363_15 Putative member of DMT superfamily (DUF486) - - - 0.00000000000000000000000000000000000000000000000002531 181.0
BYD3_k127_1341363_16 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000007533 188.0
BYD3_k127_1341363_17 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000003506 185.0
BYD3_k127_1341363_18 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000006844 152.0
BYD3_k127_1341363_19 Telomere recombination K07566 - 2.7.7.87 0.000000000000000000000000000000000007155 147.0
BYD3_k127_1341363_2 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007705 499.0
BYD3_k127_1341363_20 MoaE protein K03635 - 2.8.1.12 0.00000000000000000000000000000000000915 143.0
BYD3_k127_1341363_21 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.00000000000000000000000000000239 125.0
BYD3_k127_1341363_22 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000001495 133.0
BYD3_k127_1341363_23 Low molecular weight phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000007444 119.0
BYD3_k127_1341363_24 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000005591 99.0
BYD3_k127_1341363_25 ThiS family K03636 - - 0.00000000000006544 74.0
BYD3_k127_1341363_26 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits - - - 0.00000000000008175 76.0
BYD3_k127_1341363_27 TonB-dependent Receptor Plug Domain - - - 0.000000001815 72.0
BYD3_k127_1341363_28 Preprotein translocase SecG subunit K03075 - - 0.00000008658 59.0
BYD3_k127_1341363_29 Autotransporter beta-domain - - - 0.000001789 57.0
BYD3_k127_1341363_3 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 466.0
BYD3_k127_1341363_30 Putative zinc-finger - - - 0.0003087 50.0
BYD3_k127_1341363_4 Phosphoglycerate kinase K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 418.0
BYD3_k127_1341363_5 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005878 405.0
BYD3_k127_1341363_6 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 408.0
BYD3_k127_1341363_7 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007872 402.0
BYD3_k127_1341363_8 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005953 388.0
BYD3_k127_1341363_9 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006037 275.0
BYD3_k127_1347618_0 Aconitase family (aconitate hydratase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 458.0
BYD3_k127_1347618_1 succinate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007043 421.0
BYD3_k127_1347618_10 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000004838 135.0
BYD3_k127_1347618_12 Phospholipase/Carboxylesterase - - - 0.00000000000000000000001366 111.0
BYD3_k127_1347618_13 Ankyrin repeats (many copies) - - - 0.000000000000000000007935 107.0
BYD3_k127_1347618_14 PFAM von Willebrand factor type A K07114 - - 0.000000000000000000008788 106.0
BYD3_k127_1347618_15 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000001978 72.0
BYD3_k127_1347618_16 Tetratricopeptide repeat - - - 0.000005499 57.0
BYD3_k127_1347618_2 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 383.0
BYD3_k127_1347618_3 DNA topological change K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007373 362.0
BYD3_k127_1347618_4 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 376.0
BYD3_k127_1347618_5 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007812 353.0
BYD3_k127_1347618_6 haloacid dehalogenase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002 278.0
BYD3_k127_1347618_7 decarboxylase K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000000000002635 203.0
BYD3_k127_1347618_8 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000002966 146.0
BYD3_k127_1347618_9 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000007278 136.0
BYD3_k127_144840_0 Formate dehydrogenase, alpha subunit K00123 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009326,GO:0009987,GO:0016043,GO:0016226,GO:0016491,GO:0016622,GO:0016903,GO:0018282,GO:0018289,GO:0018291,GO:0019538,GO:0022607,GO:0031163,GO:0032991,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0047111,GO:0051186,GO:0055114,GO:0071704,GO:0071840,GO:1901564,GO:1902494 1.17.1.9 5.571e-281 884.0
BYD3_k127_144840_1 4Fe-4S dicluster domain K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005029 325.0
BYD3_k127_144840_2 molybdopterin cofactor binding K00123,K08348 - 1.17.1.9,1.17.5.3 0.0000000000000000000000000000000000000000000000000000000007357 205.0
BYD3_k127_144840_3 formate dehydrogenase K00127,K08350 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009326,GO:0009987,GO:0015942,GO:0015944,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0020037,GO:0022900,GO:0031224,GO:0031226,GO:0032787,GO:0032991,GO:0033554,GO:0036397,GO:0043436,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0050896,GO:0051716,GO:0052738,GO:0055114,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1902494 - 0.00000000000000000000000000000000000000000000000007883 184.0
BYD3_k127_144840_4 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000001991 175.0
BYD3_k127_144840_5 ferric iron binding K02380 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0008199,GO:0009061,GO:0009987,GO:0010467,GO:0015980,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046872,GO:0046914,GO:0051604,GO:0055114,GO:0071704,GO:1901564 - 0.000000000000000000007557 103.0
BYD3_k127_144840_6 PFAM regulatory protein, MarR - - - 0.00009933 52.0
BYD3_k127_1460180_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 556.0
BYD3_k127_1460180_1 - - - - 0.000000000000000000000000000000000000000000000002355 185.0
BYD3_k127_1460180_2 SdiA-regulated - - - 0.00000000000000000000000000000000000004835 158.0
BYD3_k127_1460180_3 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000001876 134.0
BYD3_k127_1497241_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006964 590.0
BYD3_k127_1497241_1 membrane organization - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 546.0
BYD3_k127_1497241_10 COG2041 Sulfite oxidase K07147 - - 0.0000000000001236 80.0
BYD3_k127_1497241_11 Putative regulatory protein - - - 0.0000001407 60.0
BYD3_k127_1497241_2 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 541.0
BYD3_k127_1497241_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 531.0
BYD3_k127_1497241_4 Dehydrogenase K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 468.0
BYD3_k127_1497241_5 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 343.0
BYD3_k127_1497241_6 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 329.0
BYD3_k127_1497241_7 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000613 223.0
BYD3_k127_1497241_8 PFAM amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000001172 223.0
BYD3_k127_1497241_9 NmrA-like family K19267 - 1.6.5.2 0.00000000000000000000000000000000000000000000001403 184.0
BYD3_k127_1519562_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 416.0
BYD3_k127_1519562_1 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005468 378.0
BYD3_k127_1519562_10 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.0000000000000000000000000000001363 126.0
BYD3_k127_1519562_11 - - - - 0.000000000000000000000000000006175 123.0
BYD3_k127_1519562_12 pyrroloquinoline quinone binding - - - 0.00000000000000000001949 98.0
BYD3_k127_1519562_13 efflux transmembrane transporter activity - - - 0.000000000000000000539 94.0
BYD3_k127_1519562_14 - - - - 0.0000000000000001686 86.0
BYD3_k127_1519562_15 - - - - 0.0000000000000001879 85.0
BYD3_k127_1519562_16 - - - - 0.000000000000003024 88.0
BYD3_k127_1519562_2 Cellulose biosynthesis protein BcsQ K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007523 346.0
BYD3_k127_1519562_3 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 292.0
BYD3_k127_1519562_4 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000001654 197.0
BYD3_k127_1519562_5 Protein of unknown function (DUF1579) - - - 0.000000000000000000000000000000000000000000000002943 183.0
BYD3_k127_1519562_6 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000001074 170.0
BYD3_k127_1519562_7 - - - - 0.00000000000000000000000000000000000000000004218 167.0
BYD3_k127_1519562_8 Protein of unknown function (DUF1579) - - - 0.000000000000000000000000000000000002896 158.0
BYD3_k127_1519562_9 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000003639 139.0
BYD3_k127_1632015_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 5.734e-308 970.0
BYD3_k127_1632015_1 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000000001905 155.0
BYD3_k127_1632015_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000001976 144.0
BYD3_k127_1632015_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000004218 84.0
BYD3_k127_1635472_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 3.853e-239 767.0
BYD3_k127_1635472_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008537 495.0
BYD3_k127_1635472_2 SIS domain K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000002799 193.0
BYD3_k127_1635472_3 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.000000000000000000000000000000001719 143.0
BYD3_k127_168930_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.935e-208 677.0
BYD3_k127_168930_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 581.0
BYD3_k127_168930_10 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000003151 238.0
BYD3_k127_168930_11 Probable molybdopterin binding domain K03831 - 2.7.7.75 0.000000000000000000000000000000000000000000000000004151 190.0
BYD3_k127_168930_12 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000002471 124.0
BYD3_k127_168930_13 Fimbrial assembly protein (PilN) - - - 0.0000000000000000605 90.0
BYD3_k127_168930_14 - - - - 0.000000000000009449 80.0
BYD3_k127_168930_15 Pilus assembly protein PilO K02664 - - 0.00000000001849 72.0
BYD3_k127_168930_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007929 470.0
BYD3_k127_168930_3 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 454.0
BYD3_k127_168930_4 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 456.0
BYD3_k127_168930_5 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 425.0
BYD3_k127_168930_6 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 397.0
BYD3_k127_168930_7 Type IV pilus assembly protein PilM; K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 378.0
BYD3_k127_168930_8 AMIN domain K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 359.0
BYD3_k127_168930_9 Phage integrase, N-terminal SAM-like domain K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001445 297.0
BYD3_k127_1779327_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1128.0
BYD3_k127_1779327_1 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003357 286.0
BYD3_k127_1779327_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000001427 229.0
BYD3_k127_1779327_3 Thioredoxin-like domain K03671 - - 0.000000000000000000000000000000005086 131.0
BYD3_k127_1779327_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000001798 135.0
BYD3_k127_1779327_5 - - - - 0.00003488 53.0
BYD3_k127_1794983_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 405.0
BYD3_k127_1794983_1 Competence-damaged protein K03742 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 337.0
BYD3_k127_1794983_10 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000000000001196 194.0
BYD3_k127_1794983_12 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.0000000000000000000000003347 113.0
BYD3_k127_1794983_13 - - - - 0.0000000000000000001942 96.0
BYD3_k127_1794983_14 - - - - 0.000000000000000002085 89.0
BYD3_k127_1794983_15 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000033 82.0
BYD3_k127_1794983_17 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.0000000001294 73.0
BYD3_k127_1794983_2 Aminotransferase class-V K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 327.0
BYD3_k127_1794983_3 Biotin-lipoyl like K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006754 325.0
BYD3_k127_1794983_4 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 332.0
BYD3_k127_1794983_5 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 311.0
BYD3_k127_1794983_6 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003301 289.0
BYD3_k127_1794983_7 GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005689 259.0
BYD3_k127_1794983_8 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001032 250.0
BYD3_k127_1794983_9 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000001133 239.0
BYD3_k127_1963930_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 572.0
BYD3_k127_1963930_1 PFAM type II secretion system protein E K02283,K03609 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008055 518.0
BYD3_k127_1963930_10 PFAM SAF domain K02279 - - 0.000000000000000000000000000000000000000000000000003994 192.0
BYD3_k127_1963930_11 Type II secretion system K12510 - - 0.000000000000000000000000000000000000000000000001719 187.0
BYD3_k127_1963930_12 Peptidoglycan-synthase activator LpoB - - - 0.00000000000000000000000000000000000000000001008 173.0
BYD3_k127_1963930_13 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000001188 174.0
BYD3_k127_1963930_14 Protein of unknown function (DUF1572) - - - 0.0000000000000000000000000000000000000000007697 167.0
BYD3_k127_1963930_15 Protein of unknown function (DUF1460) - - - 0.00000000000000000000000000000000000000000298 161.0
BYD3_k127_1963930_16 NifU-like N terminal domain K04488 - - 0.000000000000000000000000000000000000006685 152.0
BYD3_k127_1963930_17 transporter K07507 - - 0.000000000000000000000000000000000000297 145.0
BYD3_k127_1963930_18 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.0000000000000000000000000000000000007721 145.0
BYD3_k127_1963930_19 NUBPL iron-transfer P-loop NTPase K02282 - - 0.00000000000000000000000000000000003898 152.0
BYD3_k127_1963930_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 499.0
BYD3_k127_1963930_20 - - - - 0.000000000000000000000000000000001181 135.0
BYD3_k127_1963930_21 Putative Flp pilus-assembly TadE/G-like - - - 0.000000000000000000000000000000003896 144.0
BYD3_k127_1963930_22 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.0000000000000000000000000000001198 132.0
BYD3_k127_1963930_23 of nitrite reductase and ring-hydroxylating K05710 - - 0.00000000000000000000007083 101.0
BYD3_k127_1963930_24 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000001563 100.0
BYD3_k127_1963930_25 BAAT Acyl-CoA thioester hydrolase - - - 0.00000000000000001996 93.0
BYD3_k127_1963930_26 - - - - 0.0000000002491 71.0
BYD3_k127_1963930_27 - K21495 - - 0.0000000004727 63.0
BYD3_k127_1963930_3 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000975 491.0
BYD3_k127_1963930_4 COG0471 Di- and tricarboxylate transporters K03319,K09477,K11106,K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005334 458.0
BYD3_k127_1963930_5 SMART AAA ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 390.0
BYD3_k127_1963930_6 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006185 325.0
BYD3_k127_1963930_7 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000226 271.0
BYD3_k127_1963930_8 acid dehydrogenase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000001724 251.0
BYD3_k127_1963930_9 Type II secretion system K12511 - - 0.000000000000000000000000000000000000000000000000000000008227 209.0
BYD3_k127_2029928_0 DEAD DEAH box helicase K03724 - - 0.0 1577.0
BYD3_k127_2029928_1 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 472.0
BYD3_k127_2029928_11 outer membrane autotransporter barrel domain protein - - - 0.0000000000000000000000000039 128.0
BYD3_k127_2029928_12 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000001349 115.0
BYD3_k127_2029928_14 pathogenesis K02417,K02519 - - 0.000000204 62.0
BYD3_k127_2029928_15 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000008115 52.0
BYD3_k127_2029928_16 Domain of unknown function (DUF4129) - - - 0.000001913 57.0
BYD3_k127_2029928_17 Belongs to the glycosyl hydrolase 13 family K01176 - 3.2.1.1 0.000007529 59.0
BYD3_k127_2029928_2 peroxiredoxin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006229 450.0
BYD3_k127_2029928_3 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 432.0
BYD3_k127_2029928_4 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 406.0
BYD3_k127_2029928_5 Associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008237 327.0
BYD3_k127_2029928_6 COG3209 Rhs family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 326.0
BYD3_k127_2029928_7 RDD family K06384 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006519 319.0
BYD3_k127_2029928_8 protein (some members contain a von Willebrand factor type A (vWA) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000865 238.0
BYD3_k127_2029928_9 imidazolonepropionase activity - - - 0.000000000000000000000000000000000000000000000001228 192.0
BYD3_k127_2034041_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 381.0
BYD3_k127_2034041_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004261 256.0
BYD3_k127_2034041_2 CAAX protease self-immunity - - - 0.00000000000000000000000000000000000000000000000000000000000000000003627 240.0
BYD3_k127_2034041_3 SdpI/YhfL protein family - - - 0.00000000000000000000000000000000000000000000000000000000000001576 232.0
BYD3_k127_2034041_4 regulatory protein, arsR - - - 0.0000000000000000000000000002706 116.0
BYD3_k127_2034041_5 helix_turn_helix, cAMP Regulatory protein K10914 GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 - 0.0000000003456 68.0
BYD3_k127_2034041_6 Cyclic nucleotide-monophosphate binding domain K03301 - - 0.0000002412 62.0
BYD3_k127_2034041_7 - - - - 0.000006928 55.0
BYD3_k127_2034041_8 belongs to the sigma-70 factor family - - - 0.00001041 57.0
BYD3_k127_208198_0 Regulator of chromosome condensation (RCC1) repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 307.0
BYD3_k127_208198_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000002035 88.0
BYD3_k127_208198_2 - - - - 0.00000000000000004103 81.0
BYD3_k127_208198_3 nodulation - - - 0.0000000000008578 71.0
BYD3_k127_208198_5 Glycosyl hydrolases family 16 - - - 0.0000001896 59.0
BYD3_k127_208198_6 PFAM glycoside hydrolase family 16 - - - 0.00003299 53.0
BYD3_k127_2175667_0 - - - - 8.616e-226 736.0
BYD3_k127_2175667_1 flavoprotein involved in K transport - GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 467.0
BYD3_k127_2175667_2 Periplasmic component of the Tol biopolymer transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000659 274.0
BYD3_k127_2175667_3 - - - - 0.00000000000000000000005096 111.0
BYD3_k127_2175667_4 - - - - 0.0000000000000000000164 105.0
BYD3_k127_2175667_5 TonB dependent receptor K02014 - - 0.0000000000000000006931 91.0
BYD3_k127_2175667_6 Endonuclease Exonuclease Phosphatase - - - 0.0000008777 61.0
BYD3_k127_21871_0 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 379.0
BYD3_k127_21871_1 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007476 268.0
BYD3_k127_21871_2 - - - - 0.0000000000000000000000000000000000000319 151.0
BYD3_k127_21871_3 Glycosyl transferase family 2 - - - 0.000000008375 62.0
BYD3_k127_219131_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 3.908e-216 706.0
BYD3_k127_219131_1 Glycosyl hydrolase family 3 C-terminal domain K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 506.0
BYD3_k127_219131_10 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006973 322.0
BYD3_k127_219131_11 PspA/IM30 family K03969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001312 276.0
BYD3_k127_219131_12 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001232 288.0
BYD3_k127_219131_13 Nucleoside recognition K06374 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003677 248.0
BYD3_k127_219131_14 Alpha beta hydrolase K00433 - 1.11.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000003003 260.0
BYD3_k127_219131_15 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000004634 244.0
BYD3_k127_219131_16 Alpha/beta hydrolase family K18092 - - 0.0000000000000000000000000000000000000000000000000000000000000000003314 251.0
BYD3_k127_219131_17 Tetratricopeptide repeat K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000328 250.0
BYD3_k127_219131_18 Dihydrodipicolinate synthetase family - - - 0.000000000000000000000000000000000000000000000000000000001186 215.0
BYD3_k127_219131_19 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000007816 201.0
BYD3_k127_219131_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006659 490.0
BYD3_k127_219131_20 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.000000000000000000000000000000000000000000000000000004983 207.0
BYD3_k127_219131_21 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000003874 185.0
BYD3_k127_219131_22 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000566 184.0
BYD3_k127_219131_23 Putative metallopeptidase - - - 0.000000000000000000000000000000000000000114 175.0
BYD3_k127_219131_24 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000001177 144.0
BYD3_k127_219131_25 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0008150,GO:0040007 - 0.0000000000000000000000000000001433 137.0
BYD3_k127_219131_26 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000000000000000007286 133.0
BYD3_k127_219131_27 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000009633 115.0
BYD3_k127_219131_28 - - - - 0.000000000000000000000001933 107.0
BYD3_k127_219131_29 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000003345 106.0
BYD3_k127_219131_3 Mur ligase middle domain K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 456.0
BYD3_k127_219131_31 peptidase U61 LD-carboxypeptidase A K01297 - 3.4.17.13 0.000000000000007873 84.0
BYD3_k127_219131_33 Membrane - - - 0.000000005559 69.0
BYD3_k127_219131_4 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 451.0
BYD3_k127_219131_5 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 430.0
BYD3_k127_219131_6 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 434.0
BYD3_k127_219131_7 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006878 399.0
BYD3_k127_219131_8 Nucleoside recognition K06373 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 366.0
BYD3_k127_219131_9 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 353.0
BYD3_k127_2296563_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 5.73e-204 646.0
BYD3_k127_2296563_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 411.0
BYD3_k127_2296563_2 Putative RNA methylase family UPF0020 K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000004087 249.0
BYD3_k127_2296563_3 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000001628 188.0
BYD3_k127_2296563_4 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000003192 166.0
BYD3_k127_2296563_5 50S ribosomal protein L31 K02909 - - 0.000000000000000000000005449 105.0
BYD3_k127_2296563_6 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000008943 94.0
BYD3_k127_2296563_7 Control of competence regulator ComK, YlbF/YmcA - - - 0.000000000000001962 84.0
BYD3_k127_2301607_0 Aldehyde dehydrogenase family K00294 - 1.2.1.88 3.392e-220 694.0
BYD3_k127_2301607_1 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 370.0
BYD3_k127_2301607_10 - - - - 0.0000007275 61.0
BYD3_k127_2301607_11 anti-sigma factor - GO:0005575,GO:0016020 - 0.0007848 52.0
BYD3_k127_2301607_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 338.0
BYD3_k127_2301607_3 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 307.0
BYD3_k127_2301607_4 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 295.0
BYD3_k127_2301607_5 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004022 265.0
BYD3_k127_2301607_6 membrane K11622 - - 0.000000000000000000000000000000000000000000000007827 182.0
BYD3_k127_2301607_7 ECF sigma factor K03088 - - 0.000000000000000000000000000000000000000002385 158.0
BYD3_k127_2301607_8 D,D-heptose 1,7-bisphosphate phosphatase K02841,K02843,K02849,K03271,K03272,K03273 - 2.7.1.167,2.7.7.70,3.1.3.82,3.1.3.83,5.3.1.28 0.000000000000000000000000000000000003999 150.0
BYD3_k127_2301607_9 - - - - 0.00000000000000000000000007349 117.0
BYD3_k127_2306778_0 Pfam:KaiC K08482 - - 2.978e-219 694.0
BYD3_k127_2306778_1 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 485.0
BYD3_k127_2306778_10 SWI complex, BAF60b domains - - - 0.00000000000000000000000000000000669 133.0
BYD3_k127_2306778_11 - - - - 0.0000000000000002407 92.0
BYD3_k127_2306778_12 Transcriptional regulator, Crp Fnr family K22490 GO:0001130,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009314,GO:0009416,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0019216,GO:0019219,GO:0019222,GO:0019747,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0045828,GO:0045834,GO:0046889,GO:0046890,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0065007,GO:0071214,GO:0071478,GO:0071482,GO:0080090,GO:0097159,GO:0104004,GO:0140110,GO:1901363,GO:1903506,GO:1904143,GO:2000112,GO:2001141 - 0.00000002467 64.0
BYD3_k127_2306778_13 Bacterial Ig-like domain 2 - - - 0.0000003754 61.0
BYD3_k127_2306778_14 Tetratricopeptide repeat - - - 0.00009032 53.0
BYD3_k127_2306778_2 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004768 417.0
BYD3_k127_2306778_3 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002386 279.0
BYD3_k127_2306778_4 Leishmanolysin - - - 0.0000000000000000000000000000000000000000000000000000000000000000002234 262.0
BYD3_k127_2306778_5 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.000000000000000000000000000000000000000000000000000000000003231 213.0
BYD3_k127_2306778_6 Protein of unknown function (DUF423) - - - 0.000000000000000000000000000000000000000001258 158.0
BYD3_k127_2306778_7 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000003131 147.0
BYD3_k127_2306778_8 PFAM Major Facilitator Superfamily K08223 - - 0.0000000000000000000000000000000000004549 155.0
BYD3_k127_2306778_9 KaiB K08481 - - 0.000000000000000000000000000000000002436 145.0
BYD3_k127_2317637_0 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00819,K00821 GO:0003674,GO:0003824,GO:0004587,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.6.1.11,2.6.1.13,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000575 538.0
BYD3_k127_2317637_1 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009037 518.0
BYD3_k127_2317637_10 PFAM Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000009509 203.0
BYD3_k127_2317637_11 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0070930,GO:0071704,GO:1901564 - 0.000000000000000000000000000000000000000000002007 169.0
BYD3_k127_2317637_12 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000411 177.0
BYD3_k127_2317637_13 ATPase domain of DNA mismatch repair MUTS family - - - 0.000000000000000000000000000000000000000001482 173.0
BYD3_k127_2317637_14 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000000000000000000000000000000000000000001576 167.0
BYD3_k127_2317637_15 Amidohydrolase family - - - 0.00000000000000000000000000000000000000009147 171.0
BYD3_k127_2317637_16 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000006454 153.0
BYD3_k127_2317637_17 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000000000000000005112 106.0
BYD3_k127_2317637_18 Tetratricopeptide repeat - - - 0.00000000000000000001979 101.0
BYD3_k127_2317637_19 Transmembrane protein 45B-like - - - 0.0000000006386 69.0
BYD3_k127_2317637_2 DALR_2 K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 473.0
BYD3_k127_2317637_20 gas vesicle protein - - - 0.0001221 50.0
BYD3_k127_2317637_21 Bacterial Ig-like domain 2 - - - 0.0001796 50.0
BYD3_k127_2317637_3 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 465.0
BYD3_k127_2317637_4 Phosphoglucose isomerase K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 411.0
BYD3_k127_2317637_5 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006304 312.0
BYD3_k127_2317637_6 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008952 282.0
BYD3_k127_2317637_7 3'-5' exonuclease K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000003772 270.0
BYD3_k127_2317637_8 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000007801 238.0
BYD3_k127_2317637_9 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000002617 215.0
BYD3_k127_252745_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 6.971e-200 637.0
BYD3_k127_252745_1 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004247 469.0
BYD3_k127_252745_10 Acid phosphatase homologues - - - 0.000000000000000001544 96.0
BYD3_k127_252745_11 Putative adhesin - - - 0.00000000002896 74.0
BYD3_k127_252745_12 Polymer-forming cytoskeletal - - - 0.000001848 57.0
BYD3_k127_252745_13 lactoylglutathione lyase activity - - - 0.0008562 43.0
BYD3_k127_252745_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 440.0
BYD3_k127_252745_3 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 382.0
BYD3_k127_252745_4 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000458 346.0
BYD3_k127_252745_5 Putative adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001547 284.0
BYD3_k127_252745_6 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000007215 204.0
BYD3_k127_252745_7 regulation of RNA biosynthetic process - - - 0.0000000000000000000000000000000000002054 143.0
BYD3_k127_252745_8 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000001359 121.0
BYD3_k127_252745_9 - - - - 0.00000000000000000009321 95.0
BYD3_k127_2534128_0 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005964 565.0
BYD3_k127_2534128_1 Anthranilate synthase component I, N terminal region K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 501.0
BYD3_k127_2534128_10 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000003531 54.0
BYD3_k127_2534128_2 ECF sigma factor K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006138 258.0
BYD3_k127_2534128_3 Redoxin K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000002287 203.0
BYD3_k127_2534128_4 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 0.0000000000000000000000000000000000000000000002199 175.0
BYD3_k127_2534128_5 Protein of unknown function (DUF420) K08976 - - 0.000000000000000000000000000000001825 136.0
BYD3_k127_2534128_6 CoA-binding protein K06929 - - 0.00000000000000000000004097 112.0
BYD3_k127_2534128_7 EamA-like transporter family K03298 - - 0.000000000000002478 87.0
BYD3_k127_2534128_8 - - - - 0.000000000000005468 84.0
BYD3_k127_2534128_9 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000002634 79.0
BYD3_k127_2650514_0 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 430.0
BYD3_k127_2650514_1 secondary active sulfate transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 414.0
BYD3_k127_2650514_10 Calcineurin-like phosphoesterase superfamily domain K03547 - - 0.0000000000000000000000000000000000003076 163.0
BYD3_k127_2650514_11 conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.00000000000000000000000000000006017 133.0
BYD3_k127_2650514_12 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000002304 140.0
BYD3_k127_2650514_13 Putative restriction endonuclease - - - 0.0000000000000000000000000001138 124.0
BYD3_k127_2650514_14 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000002885 119.0
BYD3_k127_2650514_15 efflux transmembrane transporter activity - - - 0.0000000000000000000000000006452 121.0
BYD3_k127_2650514_16 AAA domain K03546 - - 0.00000000001444 79.0
BYD3_k127_2650514_2 FAD dependent oxidoreductase K00301 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 346.0
BYD3_k127_2650514_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 336.0
BYD3_k127_2650514_4 GIY-YIG type nucleases (URI domain) K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 316.0
BYD3_k127_2650514_5 FecCD transport family K02013,K02015 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006353 289.0
BYD3_k127_2650514_6 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000007842 225.0
BYD3_k127_2650514_7 ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000224 211.0
BYD3_k127_2650514_8 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000002174 190.0
BYD3_k127_2650514_9 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000002135 168.0
BYD3_k127_2654882_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009115 544.0
BYD3_k127_2654882_1 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009293 473.0
BYD3_k127_2654882_10 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000004407 189.0
BYD3_k127_2654882_11 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000000000000006809 174.0
BYD3_k127_2654882_12 - - - - 0.00000002111 66.0
BYD3_k127_2654882_13 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000007492 63.0
BYD3_k127_2654882_14 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0001241 54.0
BYD3_k127_2654882_15 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000164 54.0
BYD3_k127_2654882_2 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008992 447.0
BYD3_k127_2654882_3 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 430.0
BYD3_k127_2654882_4 aminopeptidase K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 371.0
BYD3_k127_2654882_5 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008596 316.0
BYD3_k127_2654882_6 ABC transporter K02013,K05776 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 327.0
BYD3_k127_2654882_7 COG1668 ABC-type Na efflux pump, permease component K01992,K09696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 323.0
BYD3_k127_2654882_8 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005283 284.0
BYD3_k127_2654882_9 ABC transporter K01990,K09697 - 3.6.3.7 0.000000000000000000000000000000000000000000000000000000000000000007757 237.0
BYD3_k127_2676041_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 5.606e-268 833.0
BYD3_k127_2676041_1 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 506.0
BYD3_k127_2676041_11 mismatched DNA binding K03555 - - 0.000007932 53.0
BYD3_k127_2676041_2 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 474.0
BYD3_k127_2676041_3 Arginase family K01476 - 3.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000619 340.0
BYD3_k127_2676041_4 UPF0126 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001413 236.0
BYD3_k127_2676041_5 - - - - 0.000000000000000000000000000000000000000000000001021 183.0
BYD3_k127_2676041_6 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.000000000000000000000000000000000000000000000005987 177.0
BYD3_k127_2676041_7 - - - - 0.000000000000000000000000000000000003378 141.0
BYD3_k127_2676041_8 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.000000000000000000000000000000002958 131.0
BYD3_k127_2676041_9 - - - - 0.00000000000000000000357 103.0
BYD3_k127_2685239_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 2.065e-260 839.0
BYD3_k127_2685239_1 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002525 263.0
BYD3_k127_2685239_2 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000002668 207.0
BYD3_k127_2685239_3 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000001041 168.0
BYD3_k127_2685239_4 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.00000000000000000000002117 115.0
BYD3_k127_2685239_5 Aerotolerance regulator N-terminal - - - 0.0000000000001665 84.0
BYD3_k127_2685239_6 cell adhesion involved in biofilm formation - - - 0.000000003796 66.0
BYD3_k127_2691265_0 Lycopene cyclase protein K10960,K21401 - 1.3.1.111,1.3.1.83,1.3.99.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003372 292.0
BYD3_k127_2691265_1 Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000284 207.0
BYD3_k127_2691265_2 CcmB protein K02193,K02194 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031224,GO:0031226,GO:0032991,GO:0042623,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.41 0.000000000000000000000000000000000000001682 156.0
BYD3_k127_2692349_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007112 317.0
BYD3_k127_2692349_1 Homoserine dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000314 238.0
BYD3_k127_2692349_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000005552 209.0
BYD3_k127_2692349_3 protein kinase activity - - - 0.00000000000000000000000000000000000001715 146.0
BYD3_k127_2704367_0 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003211 295.0
BYD3_k127_2704367_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000002226 110.0
BYD3_k127_2710978_0 TonB dependent receptor - - - 4.031e-231 746.0
BYD3_k127_2710978_1 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 454.0
BYD3_k127_2710978_2 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 410.0
BYD3_k127_2710978_3 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001897 297.0
BYD3_k127_2710978_4 HAMP domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001161 282.0
BYD3_k127_2710978_5 Transcriptional regulatory protein, C terminal K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002257 258.0
BYD3_k127_2710978_6 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000000000000000000000000000000000007954 161.0
BYD3_k127_2710978_7 - - - - 0.000000000000000000000000000000003481 141.0
BYD3_k127_2710978_8 Dolichol kinase - - - 0.000000000000000001995 94.0
BYD3_k127_2710978_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0001742 47.0
BYD3_k127_271122_0 Dehydrogenase K00117 - 1.1.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 610.0
BYD3_k127_271122_1 PQQ-like domain K00117 - 1.1.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 571.0
BYD3_k127_271122_2 Tannase and feruloyl esterase - - - 0.000000000000000000000000000000000000000000000000000000000468 215.0
BYD3_k127_271122_3 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000002711 180.0
BYD3_k127_271122_4 - - - - 0.00000000000001085 81.0
BYD3_k127_2737138_0 Cytochrome C and Quinol oxidase polypeptide I - - - 5.511e-261 816.0
BYD3_k127_2737138_1 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 581.0
BYD3_k127_2737138_10 Domain of unknown function (DUF4162) K01990 - - 0.0000000000000000000000000000001485 136.0
BYD3_k127_2737138_11 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000721 102.0
BYD3_k127_2737138_12 tetraacyldisaccharide 4'-kinase activity K09791 - - 0.00000000000000000002851 102.0
BYD3_k127_2737138_14 Glucose / Sorbosone dehydrogenase - - - 0.000001624 58.0
BYD3_k127_2737138_15 Transport permease protein K01992 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000004097 57.0
BYD3_k127_2737138_2 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008586 397.0
BYD3_k127_2737138_3 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008428 396.0
BYD3_k127_2737138_4 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 306.0
BYD3_k127_2737138_5 Cytochrome c oxidase subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000006206 238.0
BYD3_k127_2737138_6 Cytochrome C oxidase subunit II, periplasmic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002528 239.0
BYD3_k127_2737138_7 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000001273 166.0
BYD3_k127_2737138_8 Cytochrome c - - - 0.000000000000000000000000000000000000000001414 170.0
BYD3_k127_2737138_9 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.0000000000000000000000000000000009686 142.0
BYD3_k127_2755867_0 DNA-binding transcription factor activity - - - 0.0000000000000000000000000001551 121.0
BYD3_k127_2755867_1 Transposase (IS116 IS110 IS902 family) - - - 0.00000001712 61.0
BYD3_k127_2755867_2 PQQ-like domain - - - 0.0000001885 63.0
BYD3_k127_2755867_3 CAAX protease self-immunity - - - 0.000005709 57.0
BYD3_k127_2841758_0 Belongs to the glycosyl hydrolase 2 family - - - 4.903e-255 799.0
BYD3_k127_2841758_1 protoporphyrinogen oxidase activity K01854,K07011 - 5.4.99.9 7.443e-215 679.0
BYD3_k127_2841758_2 6-phospho-beta-galactosidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009042 432.0
BYD3_k127_2841758_3 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000867 366.0
BYD3_k127_2841758_4 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000001637 269.0
BYD3_k127_2841758_5 Ham1 family K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000007362 196.0
BYD3_k127_2841758_6 Protein of unknown function (DUF971) - - - 0.000000000000000000000176 103.0
BYD3_k127_2982145_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 2.287e-254 792.0
BYD3_k127_2982145_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 3.029e-224 717.0
BYD3_k127_2982145_10 3-phosphoshikimate 1-carboxyvinyltransferase activity K00800 GO:0003674,GO:0003824,GO:0003866,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0071704,GO:0071944,GO:1901576 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 371.0
BYD3_k127_2982145_11 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 340.0
BYD3_k127_2982145_12 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 GO:0001510,GO:0002128,GO:0002938,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008175,GO:0008757,GO:0009020,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0106050,GO:0140098,GO:0140101,GO:1901360 2.1.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000000001803 261.0
BYD3_k127_2982145_13 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000001794 195.0
BYD3_k127_2982145_14 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.00000000000000000000000000000000000000000000000006052 185.0
BYD3_k127_2982145_15 Biotin-requiring enzyme - - - 0.00000000000000000000000000000000000000008963 156.0
BYD3_k127_2982145_16 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000002182 171.0
BYD3_k127_2982145_17 Pantoate-beta-alanine ligase K13799 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25,6.3.2.1 0.0000000000000000000000000000000000000002997 168.0
BYD3_k127_2982145_18 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000001661 119.0
BYD3_k127_2982145_19 PDZ domain - - - 0.000000000000000002952 97.0
BYD3_k127_2982145_2 lysine biosynthetic process via aminoadipic acid - - - 1.225e-213 696.0
BYD3_k127_2982145_20 HEAT repeats - - - 0.00000000002171 68.0
BYD3_k127_2982145_21 Ligand-binding protein K01999 - - 0.000000001443 71.0
BYD3_k127_2982145_23 cell adhesion involved in biofilm formation - - - 0.0007752 52.0
BYD3_k127_2982145_3 Glycosyl transferase family 21 K00786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 557.0
BYD3_k127_2982145_4 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 508.0
BYD3_k127_2982145_5 Domain of unknown function (DUF4143) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006459 444.0
BYD3_k127_2982145_6 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 416.0
BYD3_k127_2982145_7 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 394.0
BYD3_k127_2982145_8 Oxidoreductase molybdopterin binding domain K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 384.0
BYD3_k127_2982145_9 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 394.0
BYD3_k127_3024571_0 carbamoyl transferase, NodU family K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008714 524.0
BYD3_k127_3024571_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 466.0
BYD3_k127_3024571_10 PFAM WD40 domain protein beta Propeller - - - 0.0007529 46.0
BYD3_k127_3024571_2 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008447 445.0
BYD3_k127_3024571_3 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin K13274,K14645 - - 0.0000000000000000000000000000000000000000000000000000000001443 225.0
BYD3_k127_3024571_4 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000004621 156.0
BYD3_k127_3024571_6 Belongs to the peptidase S8 family - - - 0.00000000000000000003133 106.0
BYD3_k127_3024571_7 Putative adhesin - - - 0.000000108 61.0
BYD3_k127_3024571_8 - - - - 0.0000004986 62.0
BYD3_k127_3024571_9 Vitamin K epoxide reductase family - - - 0.000116 53.0
BYD3_k127_3032258_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 606.0
BYD3_k127_3032258_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 595.0
BYD3_k127_3032258_10 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000003773 168.0
BYD3_k127_3032258_11 - - - - 0.00000000000000000000000000000000000000007464 165.0
BYD3_k127_3032258_12 SNARE associated Golgi protein - - - 0.0000000000000000000000001359 114.0
BYD3_k127_3032258_13 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate - - - 0.000000000000000000000001463 120.0
BYD3_k127_3032258_14 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000001396 85.0
BYD3_k127_3032258_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06996 - - 0.000006509 58.0
BYD3_k127_3032258_2 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 468.0
BYD3_k127_3032258_3 Phage integrase, N-terminal SAM-like domain K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 346.0
BYD3_k127_3032258_4 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000002832 281.0
BYD3_k127_3032258_5 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000007325 246.0
BYD3_k127_3032258_6 Anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000003195 231.0
BYD3_k127_3032258_7 imidazolonepropionase activity - - - 0.00000000000000000000000000000000000000000000000000000000000002527 231.0
BYD3_k127_3032258_8 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000524 212.0
BYD3_k127_3032258_9 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000002868 180.0
BYD3_k127_3039533_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 8.083e-308 956.0
BYD3_k127_3039533_1 efflux transmembrane transporter activity - - - 8.185e-258 823.0
BYD3_k127_3039533_10 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000002136 210.0
BYD3_k127_3039533_11 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000007746 225.0
BYD3_k127_3039533_12 COGs COG5616 integral membrane protein - - - 0.000000000000000000000000000000000000000002275 179.0
BYD3_k127_3039533_13 - - - - 0.00000000000000000000000000000000000000005836 161.0
BYD3_k127_3039533_14 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000002146 153.0
BYD3_k127_3039533_15 ketosteroid isomerase - - - 0.000000000000000000000005866 118.0
BYD3_k127_3039533_16 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000004447 82.0
BYD3_k127_3039533_17 SNARE associated Golgi protein - - - 0.000000000000002447 85.0
BYD3_k127_3039533_18 Copper resistance protein D K07245 - - 0.00000000001019 76.0
BYD3_k127_3039533_19 CopC domain K07156 - - 0.00000001226 63.0
BYD3_k127_3039533_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 6.025e-209 654.0
BYD3_k127_3039533_20 cytochrome c K00405,K07245 - - 0.0000002412 59.0
BYD3_k127_3039533_21 - - - - 0.0000005986 58.0
BYD3_k127_3039533_22 Copper binding periplasmic protein CusF K07152 - - 0.000001784 56.0
BYD3_k127_3039533_23 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00002156 51.0
BYD3_k127_3039533_3 Domain of unknown function (DUF5117) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 504.0
BYD3_k127_3039533_4 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 489.0
BYD3_k127_3039533_5 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 293.0
BYD3_k127_3039533_6 Histidine-specific methyltransferase, SAM-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002357 287.0
BYD3_k127_3039533_7 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000001897 228.0
BYD3_k127_3039533_8 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000007897 219.0
BYD3_k127_3039533_9 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000000001162 212.0
BYD3_k127_3082849_0 Glycine zipper - - - 0.00000000000000000000000000000000000000000000000000000002196 207.0
BYD3_k127_3082849_1 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.0000000000000000000000000000001006 130.0
BYD3_k127_3082849_2 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000006279 128.0
BYD3_k127_3082849_3 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000005816 90.0
BYD3_k127_3082849_4 PilT protein domain protein - - - 0.000000001794 64.0
BYD3_k127_3082849_5 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0001561 44.0
BYD3_k127_3096231_0 PQQ-like domain K00117 - 1.1.5.2 1.11e-316 980.0
BYD3_k127_3096231_1 Major facilitator Superfamily - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 569.0
BYD3_k127_3096231_10 Low molecular weight phosphatase family K01104 - 3.1.3.48 0.000000000000000000000000000000000000000003018 161.0
BYD3_k127_3096231_11 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000001978 149.0
BYD3_k127_3096231_12 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006323,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010556,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051276,GO:0060255,GO:0065007,GO:0071103,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2001141 - 0.0000000000000000000000000665 110.0
BYD3_k127_3096231_13 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000006958 71.0
BYD3_k127_3096231_14 Domain of unknown function (DUF4159) - - - 0.000000000008069 77.0
BYD3_k127_3096231_15 diguanylate cyclase - - - 0.000000002417 65.0
BYD3_k127_3096231_16 DSBA-like thioredoxin domain - - - 0.00000002663 67.0
BYD3_k127_3096231_2 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004254 535.0
BYD3_k127_3096231_3 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 495.0
BYD3_k127_3096231_4 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 360.0
BYD3_k127_3096231_5 Aldehyde dehydrogenase family K00128,K00135 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 336.0
BYD3_k127_3096231_6 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000353 329.0
BYD3_k127_3096231_7 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000008746 248.0
BYD3_k127_3096231_8 PFAM Fructosamine kinase - GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 - 0.0000000000000000000000000000000000000000000000000000000002599 216.0
BYD3_k127_3096231_9 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.0000000000000000000000000000000000000000000252 184.0
BYD3_k127_3334355_0 Maltogenic Amylase, C-terminal domain K05341,K05343 - 2.4.1.4,3.2.1.1,5.4.99.16 2.949e-227 715.0
BYD3_k127_3334355_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007658 578.0
BYD3_k127_3334355_10 PFAM acylphosphatase K01512 - 3.6.1.7 0.00000000000000005493 85.0
BYD3_k127_3334355_11 acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.000000000000003133 81.0
BYD3_k127_3334355_12 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000001341 69.0
BYD3_k127_3334355_13 Ribosomal protein L34 K02914 - - 0.000000008228 59.0
BYD3_k127_3334355_14 4'-phosphopantetheinyl transferase superfamily - - - 0.00001734 57.0
BYD3_k127_3334355_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 460.0
BYD3_k127_3334355_3 Bacterial dnaA protein helix-turn-helix domain K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008966 415.0
BYD3_k127_3334355_4 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000559 379.0
BYD3_k127_3334355_5 Catalytic activity. It is involved in the biological process described with trehalose biosynthetic process - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0033554,GO:0034637,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044464,GO:0046351,GO:0050896,GO:0051716,GO:0070413,GO:0071704,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004342 376.0
BYD3_k127_3334355_6 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 319.0
BYD3_k127_3334355_7 PFAM Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000008202 241.0
BYD3_k127_3334355_8 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000002509 168.0
BYD3_k127_3334355_9 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000000002707 123.0
BYD3_k127_3364880_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 2.315e-239 760.0
BYD3_k127_3364880_1 Required for chromosome condensation and partitioning K03529 - - 1.989e-207 689.0
BYD3_k127_3364880_10 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008483 280.0
BYD3_k127_3364880_11 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000468 246.0
BYD3_k127_3364880_12 arylamine N-acetyltransferase activity K00675 - 2.3.1.118 0.000000000000000000000000000000000000000000000000000000000000000000003637 243.0
BYD3_k127_3364880_13 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000002707 243.0
BYD3_k127_3364880_14 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000008921 233.0
BYD3_k127_3364880_15 Peptidase dimerisation domain K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000001863 229.0
BYD3_k127_3364880_16 - - - - 0.0000000000000000000000000000000000000000000000000000000007812 224.0
BYD3_k127_3364880_17 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000000000000002237 205.0
BYD3_k127_3364880_18 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000008057 210.0
BYD3_k127_3364880_19 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000000006156 189.0
BYD3_k127_3364880_2 MgsA AAA+ ATPase C terminal K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 523.0
BYD3_k127_3364880_20 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000001589 189.0
BYD3_k127_3364880_21 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000009744 166.0
BYD3_k127_3364880_22 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000586 141.0
BYD3_k127_3364880_23 peptidase M23 - - - 0.00000000000000000000000000000002365 140.0
BYD3_k127_3364880_24 Binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000001797 128.0
BYD3_k127_3364880_25 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000004819 130.0
BYD3_k127_3364880_26 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000002958 108.0
BYD3_k127_3364880_27 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000476 102.0
BYD3_k127_3364880_28 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000246 99.0
BYD3_k127_3364880_29 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000817 96.0
BYD3_k127_3364880_3 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 472.0
BYD3_k127_3364880_30 - - - - 0.000000000003202 77.0
BYD3_k127_3364880_31 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000004172 73.0
BYD3_k127_3364880_32 - - - - 0.0000000005256 64.0
BYD3_k127_3364880_33 Sporulation related domain - - - 0.000046 54.0
BYD3_k127_3364880_4 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005845 447.0
BYD3_k127_3364880_5 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007912 458.0
BYD3_k127_3364880_6 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005236 426.0
BYD3_k127_3364880_7 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 447.0
BYD3_k127_3364880_8 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006158 427.0
BYD3_k127_3364880_9 ADP-ribosylation factor family K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 291.0
BYD3_k127_3365774_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1227.0
BYD3_k127_3365774_1 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 0.0 1071.0
BYD3_k127_3365774_10 TIGRFAM threonine synthase K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 355.0
BYD3_k127_3365774_11 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 326.0
BYD3_k127_3365774_12 Putative glycosyl hydrolase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 308.0
BYD3_k127_3365774_13 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009588 284.0
BYD3_k127_3365774_14 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002404 282.0
BYD3_k127_3365774_15 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000004008 281.0
BYD3_k127_3365774_16 Putative aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006865 274.0
BYD3_k127_3365774_17 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000007293 266.0
BYD3_k127_3365774_18 Formyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002022 260.0
BYD3_k127_3365774_19 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000001667 213.0
BYD3_k127_3365774_2 DNA topoisomerase II activity K02469 - 5.99.1.3 2.417e-313 980.0
BYD3_k127_3365774_20 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000002942 217.0
BYD3_k127_3365774_21 Histidine biosynthesis protein K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000008325 214.0
BYD3_k127_3365774_22 glyoxalase III activity K02005 - - 0.000000000000000000000000000000000000000000000000000000001904 204.0
BYD3_k127_3365774_23 Histidine biosynthesis bifunctional protein HisIE K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000003626 189.0
BYD3_k127_3365774_24 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000003787 187.0
BYD3_k127_3365774_25 - - - - 0.000000000000000000000000000000000000000000000002441 194.0
BYD3_k127_3365774_26 - - - - 0.000000000000000000000000000000000000000000000008928 181.0
BYD3_k127_3365774_27 homoserine kinase activity K00872 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.1.39 0.00000000000000000000000000000000000000000001079 174.0
BYD3_k127_3365774_28 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000006428 160.0
BYD3_k127_3365774_29 Xanthine and CO dehydrogenases maturation factor K07402 - - 0.000000000000000000000000000000000000000006103 159.0
BYD3_k127_3365774_3 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 2.163e-250 807.0
BYD3_k127_3365774_30 - - - - 0.00000000000000000000000000000000000000001524 162.0
BYD3_k127_3365774_31 COG1651 Protein-disulfide isomerase - - - 0.0000000000000000000000000000000000000002175 160.0
BYD3_k127_3365774_32 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000002732 137.0
BYD3_k127_3365774_33 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000305 121.0
BYD3_k127_3365774_34 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000009634 122.0
BYD3_k127_3365774_35 Domain of unknown function (DUF4180) - - - 0.0000000000000000000000002083 118.0
BYD3_k127_3365774_36 XdhC and CoxI family - - - 0.00000000000000000000004448 109.0
BYD3_k127_3365774_37 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000002959 100.0
BYD3_k127_3365774_38 VKc - - - 0.000000000000000000003625 99.0
BYD3_k127_3365774_39 Protein of unknown function (DUF402) K09145 - - 0.000000000000000156 88.0
BYD3_k127_3365774_4 ABC transporter transmembrane region K11085 - - 2.854e-214 680.0
BYD3_k127_3365774_40 - - - - 0.00000000000001712 84.0
BYD3_k127_3365774_41 SPFH domain / Band 7 family - - - 0.0000000009306 69.0
BYD3_k127_3365774_42 TonB-dependent receptor - - - 0.00000001954 66.0
BYD3_k127_3365774_43 Acidic repeat-containing protein - GO:0000003,GO:0000280,GO:0000793,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006139,GO:0006259,GO:0006304,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0022402,GO:0022414,GO:0034641,GO:0035510,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0044728,GO:0045132,GO:0046483,GO:0048285,GO:0051321,GO:0070988,GO:0071704,GO:0071840,GO:0080111,GO:0090304,GO:0098813,GO:0140013,GO:1901360,GO:1903046 - 0.000001501 59.0
BYD3_k127_3365774_45 TIGRFAM TonB family protein K03832 - - 0.0000063 57.0
BYD3_k127_3365774_5 ABC transporter K06147,K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 582.0
BYD3_k127_3365774_6 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013,K15509 - 1.1.1.23,1.1.1.308 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 397.0
BYD3_k127_3365774_7 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases K04091 - 1.14.14.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 377.0
BYD3_k127_3365774_8 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K01663,K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 357.0
BYD3_k127_3365774_9 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 371.0
BYD3_k127_3431420_0 AMP-dependent synthetase - - - 2.012e-219 709.0
BYD3_k127_3431420_1 Dolichol kinase - - - 0.000000000000336 78.0
BYD3_k127_3434849_0 Heat shock 70 kDa protein K04043 - - 2.137e-262 822.0
BYD3_k127_3434849_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 3.081e-229 734.0
BYD3_k127_3434849_10 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0006355,GO:0006508,GO:0006515,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051603,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000004324 280.0
BYD3_k127_3434849_11 Phosphorylase superfamily K00772,K03783 - 2.4.2.1,2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000009768 253.0
BYD3_k127_3434849_12 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000004066 233.0
BYD3_k127_3434849_13 membrane protein (homolog of Drosophila rhomboid) - - - 0.0000000000000000000000000000000000000000000000000001182 190.0
BYD3_k127_3434849_14 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000006023 197.0
BYD3_k127_3434849_15 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000008144 194.0
BYD3_k127_3434849_16 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.00000000000000000000000000000000000000000000000223 178.0
BYD3_k127_3434849_17 COGs COG1253 Hemolysins and related protein containing CBS domains - - - 0.0000000000000000000000000000000000000000000002181 183.0
BYD3_k127_3434849_18 RNA 2'-O ribose methyltransferase substrate binding K03437 - - 0.0000000000000000000000000000000000000000123 163.0
BYD3_k127_3434849_19 SnoaL-like domain - - - 0.0000000000000000000000000000001543 129.0
BYD3_k127_3434849_2 Bacterial protein of unknown function (DUF853) K06915 - - 5.999e-221 696.0
BYD3_k127_3434849_20 Transcriptional regulator PadR-like family - - - 0.0000000000000003587 82.0
BYD3_k127_3434849_21 - - - - 0.0000000000000005061 87.0
BYD3_k127_3434849_22 Rhomboid family - - - 0.0000000000002127 72.0
BYD3_k127_3434849_23 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.00001217 53.0
BYD3_k127_3434849_3 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 633.0
BYD3_k127_3434849_4 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 553.0
BYD3_k127_3434849_5 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 416.0
BYD3_k127_3434849_6 Na+ dependent nucleoside transporter C-terminus K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 416.0
BYD3_k127_3434849_7 Trypsin K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 330.0
BYD3_k127_3434849_8 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009341 288.0
BYD3_k127_3434849_9 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000001601 274.0
BYD3_k127_3437497_0 4Fe-4S dicluster domain K00184 - - 9.799e-237 766.0
BYD3_k127_3437497_1 Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 558.0
BYD3_k127_3437497_10 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.0000000000002088 83.0
BYD3_k127_3437497_2 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 317.0
BYD3_k127_3437497_3 Domain of unknown function (DUF3488) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001052 275.0
BYD3_k127_3437497_4 Pfam Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000001494 223.0
BYD3_k127_3437497_5 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000009024 145.0
BYD3_k127_3437497_6 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000002936 134.0
BYD3_k127_3437497_7 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000005512 149.0
BYD3_k127_3437497_8 cytochrome c - - - 0.00000000000000000645 92.0
BYD3_k127_3437497_9 PIN domain - - - 0.0000000000000000413 82.0
BYD3_k127_3462899_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 371.0
BYD3_k127_3462899_1 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 306.0
BYD3_k127_3462899_2 protein kinase activity - - - 0.000000000001045 68.0
BYD3_k127_3462899_3 protein kinase activity - - - 0.0000002875 54.0
BYD3_k127_3479394_0 DNA polymerase K02337 - 2.7.7.7 1.77e-298 955.0
BYD3_k127_3479394_1 Belongs to the aldehyde dehydrogenase family K00130,K00135,K09472,K22187 - 1.2.1.16,1.2.1.20,1.2.1.79,1.2.1.8,1.2.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 617.0
BYD3_k127_3479394_10 - K12065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006415 306.0
BYD3_k127_3479394_11 protoporphyrinogen oxidase K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 308.0
BYD3_k127_3479394_12 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000007736 239.0
BYD3_k127_3479394_13 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000005183 238.0
BYD3_k127_3479394_14 peroxidase activity K09162 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016701,GO:0016702,GO:0042597,GO:0044464,GO:0050587,GO:0051213,GO:0055114 1.13.11.49 0.00000000000000000000000000000000000000000000000000009849 198.0
BYD3_k127_3479394_15 RibD C-terminal domain K00287 - 1.5.1.3 0.0000000000000000000000000000002973 140.0
BYD3_k127_3479394_16 FMN_bind - - - 0.00000000000000000000000005265 121.0
BYD3_k127_3479394_18 TIGRFAM sulfate ABC transporter K02047 - - 0.00000000006321 67.0
BYD3_k127_3479394_2 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 522.0
BYD3_k127_3479394_3 Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 514.0
BYD3_k127_3479394_4 Bacterial extracellular solute-binding protein K02048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 385.0
BYD3_k127_3479394_5 Peptidase family M3 K01414 - 3.4.24.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004102 350.0
BYD3_k127_3479394_6 TIGRFAM sulfate ABC transporter K02046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 347.0
BYD3_k127_3479394_7 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 335.0
BYD3_k127_3479394_8 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 318.0
BYD3_k127_3479394_9 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000516 314.0
BYD3_k127_3610259_0 ABC-type transport system involved in Fe-S cluster assembly, permease component K09014 - - 8.828e-226 707.0
BYD3_k127_3610259_1 protein containing a ferredoxin-like domain K18929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 579.0
BYD3_k127_3610259_10 phosphonopyruvate decarboxylase K09459 - 4.1.1.82 0.00000002471 63.0
BYD3_k127_3610259_2 Bacterial regulatory protein, Fis family K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 389.0
BYD3_k127_3610259_3 Uncharacterized protein family (UPF0051) K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 364.0
BYD3_k127_3610259_4 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 358.0
BYD3_k127_3610259_5 ATPases associated with a variety of cellular activities K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 319.0
BYD3_k127_3610259_6 Fe-S oxidoreductase K18928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009652 316.0
BYD3_k127_3610259_7 PFAM Uncharacterised ACR, YkgG family COG1556 K00782 - - 0.00000000000000000000000000000000000000000000005661 192.0
BYD3_k127_3610259_8 Belongs to the TPP enzyme family - - - 0.000000000000000000000000000000000000000001386 166.0
BYD3_k127_3610259_9 HAMP domain K02482 - 2.7.13.3 0.00000000000000000000000000000000778 146.0
BYD3_k127_3612182_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007316 444.0
BYD3_k127_3612182_1 PhoD-like phosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 366.0
BYD3_k127_3612182_10 Peptidase family M48 - - - 0.0000000000000004065 83.0
BYD3_k127_3612182_11 Virulence factor BrkB K07058 - - 0.00000000000005417 76.0
BYD3_k127_3612182_12 - - - - 0.00000000003634 68.0
BYD3_k127_3612182_13 - - - - 0.00000002656 59.0
BYD3_k127_3612182_14 - - - - 0.0000007529 52.0
BYD3_k127_3612182_15 GAF domain - - - 0.000001262 55.0
BYD3_k127_3612182_2 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 294.0
BYD3_k127_3612182_3 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000061 261.0
BYD3_k127_3612182_4 Pfam:Pyridox_oxidase K07006 - - 0.00000000000000000000000000000000000000000000000000000000000000000717 236.0
BYD3_k127_3612182_5 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000006351 190.0
BYD3_k127_3612182_6 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000002118 174.0
BYD3_k127_3612182_7 response regulator K07782 - - 0.0000000000000000000000000000000000000000000242 183.0
BYD3_k127_3612182_8 - - - - 0.000000000000000000000000000000000000001094 154.0
BYD3_k127_3612182_9 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000003744 141.0
BYD3_k127_3660233_0 LVIVD repeat - - - 6.466e-255 806.0
BYD3_k127_3660233_1 efflux transmembrane transporter activity - - - 2.214e-232 744.0
BYD3_k127_3660233_10 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005333 373.0
BYD3_k127_3660233_11 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 371.0
BYD3_k127_3660233_12 Integral membrane protein TerC family K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 359.0
BYD3_k127_3660233_13 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005684 379.0
BYD3_k127_3660233_14 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004162 281.0
BYD3_k127_3660233_15 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001249 282.0
BYD3_k127_3660233_16 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000004602 226.0
BYD3_k127_3660233_17 hydrolase (HAD superfamily) K01560,K07025,K08723 - 3.1.3.5,3.8.1.2 0.000000000000000000000000000000000000000000000000000000008527 209.0
BYD3_k127_3660233_18 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000001252 196.0
BYD3_k127_3660233_19 Domain of unknown function (DUF305) - - - 0.00000000000000000000000000000000000000000000001412 182.0
BYD3_k127_3660233_2 Ankyrin repeat - - - 1.652e-226 719.0
BYD3_k127_3660233_20 unsaturated chondroitin disaccharide hydrolase activity K15532 - 3.2.1.172 0.0000000000000000000000000000000000000000000001207 179.0
BYD3_k127_3660233_21 Protein of unknown function (DUF520) K09767 - - 0.000000000000000000000000000000000000000000000257 173.0
BYD3_k127_3660233_22 Transcription factor zinc-finger - - - 0.000000000000000000000000000000000000000000001852 173.0
BYD3_k127_3660233_23 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000002538 156.0
BYD3_k127_3660233_24 - - - - 0.0000000000000000000000000001178 130.0
BYD3_k127_3660233_25 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000147 117.0
BYD3_k127_3660233_26 negative regulation of transcription, DNA-templated - - - 0.000000000000008453 78.0
BYD3_k127_3660233_27 domain, Protein - - - 0.00000000000002006 85.0
BYD3_k127_3660233_28 PKD domain containing protein - - - 0.000000000001051 82.0
BYD3_k127_3660233_29 Transcriptional regulator padr family - - - 0.000000000004438 71.0
BYD3_k127_3660233_3 COG2217 Cation transport ATPase K01534 - 3.6.3.3,3.6.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 565.0
BYD3_k127_3660233_30 efflux transmembrane transporter activity - - - 0.00000000002378 66.0
BYD3_k127_3660233_31 Cupin 2, conserved barrel domain protein - - - 0.00002097 54.0
BYD3_k127_3660233_4 PQQ-like domain K00114 - 1.1.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006258 534.0
BYD3_k127_3660233_5 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006757 522.0
BYD3_k127_3660233_6 Peptidase family S58 K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006149 441.0
BYD3_k127_3660233_7 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 423.0
BYD3_k127_3660233_8 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006162 391.0
BYD3_k127_3660233_9 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 403.0
BYD3_k127_3726676_0 Mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 324.0
BYD3_k127_3726676_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001448 244.0
BYD3_k127_3726676_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000001331 176.0
BYD3_k127_3726676_3 thiolester hydrolase activity - - - 0.0000000000000000000000000000000000000004707 162.0
BYD3_k127_3726676_4 amine dehydrogenase activity - - - 0.0000000000000000000000000000000002909 147.0
BYD3_k127_3726676_5 - - - - 0.00000000000000000000000000000003631 131.0
BYD3_k127_3726676_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000003571 104.0
BYD3_k127_37533_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006775 490.0
BYD3_k127_37533_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 454.0
BYD3_k127_37533_2 L-seryl-tRNA selenium transferase K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005167 400.0
BYD3_k127_37533_3 Bacterial extracellular solute-binding proteins, family 3 - - - 0.00000000000000000000000000000000002552 139.0
BYD3_k127_37533_4 HAD-hyrolase-like K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000003218 123.0
BYD3_k127_37533_5 Bacterial Ig-like domain - - - 0.0000000000007852 81.0
BYD3_k127_3787174_0 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 428.0
BYD3_k127_3787174_1 Thiol oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 395.0
BYD3_k127_3787174_10 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000001782 142.0
BYD3_k127_3787174_11 Domain of unkown function (DUF1775) K07040 - - 0.00000000000000000000000000005028 126.0
BYD3_k127_3787174_12 Copper resistance protein D K07245 - - 0.00000000000000000000000001421 125.0
BYD3_k127_3787174_13 - - - - 0.00000000000000000000001378 106.0
BYD3_k127_3787174_14 oxidoreductase activity, acting on diphenols and related substances as donors K02636 - 1.10.9.1 0.000000000000000003943 90.0
BYD3_k127_3787174_15 Type II secretion system (T2SS), protein G K02456 - - 0.00003648 51.0
BYD3_k127_3787174_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008455 386.0
BYD3_k127_3787174_3 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006403 366.0
BYD3_k127_3787174_4 sister chromatid segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 352.0
BYD3_k127_3787174_5 PFAM Aminotransferase class I and II K00639,K00652,K01906 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29,2.3.1.47,6.2.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 300.0
BYD3_k127_3787174_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000001665 284.0
BYD3_k127_3787174_7 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006917 264.0
BYD3_k127_3787174_8 Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) K08680 - 4.2.99.20 0.000000000000000000000000000000000000000000000000000001705 204.0
BYD3_k127_3787174_9 short-chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000008324 184.0
BYD3_k127_380251_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00367 - 1.7.7.2 0.0 1388.0
BYD3_k127_380251_1 reductase 4Fe-4S domain K00362 - 1.7.1.15 0.0 1022.0
BYD3_k127_380251_10 MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 516.0
BYD3_k127_380251_11 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 548.0
BYD3_k127_380251_12 Penicillin K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003938 512.0
BYD3_k127_380251_13 Binding-protein-dependent transport system inner membrane component K15577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 392.0
BYD3_k127_380251_14 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 387.0
BYD3_k127_380251_15 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007687 366.0
BYD3_k127_380251_16 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 303.0
BYD3_k127_380251_17 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004647 299.0
BYD3_k127_380251_18 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001399 276.0
BYD3_k127_380251_19 Aerotolerance regulator N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000275 284.0
BYD3_k127_380251_2 FeoA - - - 2.724e-294 921.0
BYD3_k127_380251_20 iron ion homeostasis K03322,K03709,K04758 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005554 256.0
BYD3_k127_380251_21 Glycosyl transferase family 21 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000005461 254.0
BYD3_k127_380251_22 Alginate export - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007235 272.0
BYD3_k127_380251_23 Dienelactone hydrolase family K07020 - - 0.000000000000000000000000000000000000000000000000000000000000000000003663 241.0
BYD3_k127_380251_24 chitin binding - - - 0.00000000000000000000000000000000000000000000000000000002169 211.0
BYD3_k127_380251_25 PAS domain K00575,K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000006868 196.0
BYD3_k127_380251_26 PFAM outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000007917 185.0
BYD3_k127_380251_27 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000951 173.0
BYD3_k127_380251_28 TIGRFAM nitrite reductase NAD(P)H , small subunit K00363 - 1.7.1.15 0.000000000000000000000000000000000000007222 150.0
BYD3_k127_380251_29 PFAM MazG nucleotide pyrophosphohydrolase - - - 0.00000000000000000000000000000000000003397 146.0
BYD3_k127_380251_3 ABC transporter - - - 1.701e-244 766.0
BYD3_k127_380251_30 NUDIX domain - - - 0.0000000000000000000000000000000005997 139.0
BYD3_k127_380251_31 von Willebrand factor type A domain K07114 - - 0.000000000000000000000000000000003519 141.0
BYD3_k127_380251_33 Von Willebrand factor type A domain K07114 - - 0.000000000000000000000017 115.0
BYD3_k127_380251_34 transporter - - - 0.0000000000000000000002949 111.0
BYD3_k127_380251_35 protein kinase activity - - - 0.00000000000000004867 83.0
BYD3_k127_380251_36 pathogenesis - - - 0.0000000000000002914 89.0
BYD3_k127_380251_37 COG0457 FOG TPR repeat - - - 0.000000000009406 79.0
BYD3_k127_380251_38 - - - - 0.00000000002657 69.0
BYD3_k127_380251_39 FeoA K04758 - - 0.0000000173 62.0
BYD3_k127_380251_4 NMT1-like family K15576 - - 4.49e-220 692.0
BYD3_k127_380251_40 polysaccharide deacetylase - - - 0.00000005355 66.0
BYD3_k127_380251_41 - - - - 0.0000003974 63.0
BYD3_k127_380251_42 COG0467 RecA-superfamily ATPases implicated in signal transduction K08482 - - 0.000001667 61.0
BYD3_k127_380251_43 von Willebrand factor type A domain K07114 - - 0.00008754 53.0
BYD3_k127_380251_5 Ferrous iron transport protein B K04759 - - 1.056e-217 692.0
BYD3_k127_380251_6 ABC transporter K02049,K15578 - - 1.214e-217 700.0
BYD3_k127_380251_7 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 638.0
BYD3_k127_380251_8 COG2303 Choline dehydrogenase and related flavoproteins K06151 - 1.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 601.0
BYD3_k127_380251_9 Fis Family K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 588.0
BYD3_k127_3830677_0 Protein export membrane protein - - - 0.0 1261.0
BYD3_k127_3830677_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07306,K08352 - 1.8.5.3,1.8.5.5 0.0 1173.0
BYD3_k127_3830677_10 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000468 209.0
BYD3_k127_3830677_11 oxidoreductase K07222 - - 0.000000000000000000000000000000000000000000000000000007973 192.0
BYD3_k127_3830677_12 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000008827 187.0
BYD3_k127_3830677_13 Rossmann-like domain K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000001066 182.0
BYD3_k127_3830677_14 Polysaccharide biosynthesis protein K08678 - 4.1.1.35 0.0000000000000000000000294 114.0
BYD3_k127_3830677_15 phosphate-selective porin O and P - - - 0.00001963 56.0
BYD3_k127_3830677_2 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 428.0
BYD3_k127_3830677_3 (GMC) oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 424.0
BYD3_k127_3830677_4 UbiA prenyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 384.0
BYD3_k127_3830677_5 Barrel-sandwich domain of CusB or HlyD membrane-fusion K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 347.0
BYD3_k127_3830677_6 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004702 293.0
BYD3_k127_3830677_7 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001266 291.0
BYD3_k127_3830677_8 efflux transmembrane transporter activity K15725 - - 0.000000000000000000000000000000000000000000000000000000000000000169 237.0
BYD3_k127_3830677_9 dehydratase - - - 0.000000000000000000000000000000000000000000000000000000001661 207.0
BYD3_k127_3907864_0 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008001 541.0
BYD3_k127_3907864_1 Nad-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001511 245.0
BYD3_k127_3907864_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000004007 241.0
BYD3_k127_3907864_3 Belongs to the ompA family K20276 - - 0.0000000000000000000000017 122.0
BYD3_k127_3907864_4 Periplasmic copper-binding protein (NosD) - - - 0.0000000008259 74.0
BYD3_k127_3907864_5 cellulase activity - - - 0.000000009798 70.0
BYD3_k127_3907864_6 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000008829 67.0
BYD3_k127_3919269_0 Glycosyl hydrolase family 57 - - - 0.0 1011.0
BYD3_k127_3919269_1 ketosteroid isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007874 438.0
BYD3_k127_3919269_10 DGC domain - - - 0.000000000000000000000000000000000000001843 152.0
BYD3_k127_3919269_11 TIGRFAM geranylgeranyl reductase - - - 0.0000000000000000000000000000004281 137.0
BYD3_k127_3919269_12 Domain of unknown function (DUF305) - - - 0.000000000000000000000000001634 113.0
BYD3_k127_3919269_13 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.00000000000002438 74.0
BYD3_k127_3919269_15 Protein of unknown function (DUF2934) - - - 0.0000000002832 65.0
BYD3_k127_3919269_16 Heavy metal translocating P-type atpase K01533,K17686 - 3.6.3.4,3.6.3.54 0.000007772 53.0
BYD3_k127_3919269_2 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005625 250.0
BYD3_k127_3919269_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007502 252.0
BYD3_k127_3919269_4 PFAM ATP-binding region K02484,K07678 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000002871 253.0
BYD3_k127_3919269_5 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000006807 249.0
BYD3_k127_3919269_6 Peroxiredoxin - GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0010035,GO:0010038,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0046686,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.000000000000000000000000000000000000000000000000000000000000000001699 248.0
BYD3_k127_3919269_7 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000002692 204.0
BYD3_k127_3919269_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000003464 176.0
BYD3_k127_3938077_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 520.0
BYD3_k127_3938077_1 Predicted membrane protein (DUF2243) - - - 0.0000000000000000000000000000000000000000002896 168.0
BYD3_k127_3938077_2 transcriptional activator domain - - - 0.00000000000000000000000000000000000002956 165.0
BYD3_k127_3938077_3 PFAM WD40-like beta Propeller - - - 0.00000000000000000000000000000001913 141.0
BYD3_k127_3938077_4 PFAM Patatin - - - 0.0000000000000000000000203 113.0
BYD3_k127_3938077_5 Bacterial regulatory proteins, tetR family - - - 0.000000000000009979 83.0
BYD3_k127_3938077_6 PFAM Patatin - - - 0.000000000661 61.0
BYD3_k127_3938077_7 Helix-turn-helix domain - - - 0.0001602 53.0
BYD3_k127_3969251_0 Peptidase, family M49 - - - 1.496e-201 653.0
BYD3_k127_3969251_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 383.0
BYD3_k127_3969251_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000001592 96.0
BYD3_k127_3969251_3 transcriptional regulators - - - 0.00000000000000001622 87.0
BYD3_k127_399577_0 Chlorophyllase K01061 - 3.1.1.45 0.000000000000000000000000000000000000003217 158.0
BYD3_k127_399577_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000004243 158.0
BYD3_k127_399577_2 Cytochrome c - - - 0.00000000000000000736 88.0
BYD3_k127_399577_3 - - - - 0.0000000004152 66.0
BYD3_k127_399577_4 - - - - 0.0000001224 61.0
BYD3_k127_4020088_0 oligoendopeptidase F K08602 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 595.0
BYD3_k127_4020088_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 408.0
BYD3_k127_4020088_2 Predicted membrane protein (DUF2231) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 293.0
BYD3_k127_4020088_3 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000000000000001346 196.0
BYD3_k127_4020088_4 - - - - 0.00000000000000000000000000000000000000000000000000001827 202.0
BYD3_k127_4020088_5 Gcn5-related n-acetyltransferase - - - 0.000000000000000000000000000000000000000001138 162.0
BYD3_k127_4020088_7 Cupin 2, conserved barrel domain protein K16011 - 2.7.7.13,5.3.1.8 0.0000000000000001512 86.0
BYD3_k127_4030539_0 RNA polymerase sigma factor, sigma-70 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007481 565.0
BYD3_k127_4030539_1 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 554.0
BYD3_k127_4030539_10 Domain of unknown function (DUF3943) - - - 0.000000000000000000000000000000000000000000000000000001532 220.0
BYD3_k127_4030539_11 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K01647,K22491 - 2.3.3.1 0.000000000000000000000000000000000000000000000000221 188.0
BYD3_k127_4030539_12 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.000000000000000000000000000000003154 138.0
BYD3_k127_4030539_13 Predicted membrane protein (DUF2177) - - - 0.0000000000000000000000000000001389 140.0
BYD3_k127_4030539_14 Cold shock K03704 - - 0.000000000000000000000000000003315 120.0
BYD3_k127_4030539_15 thiolester hydrolase activity - - - 0.000000000000000000000000000005073 124.0
BYD3_k127_4030539_16 Winged helix-turn-helix DNA-binding - - - 0.0000000000000000000000009645 114.0
BYD3_k127_4030539_18 Esterase PHB depolymerase - - - 0.00000000000000005486 93.0
BYD3_k127_4030539_2 membrane protein, terc K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003056 460.0
BYD3_k127_4030539_20 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000009311 66.0
BYD3_k127_4030539_3 FAD dependent oxidoreductase K06954 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004513 451.0
BYD3_k127_4030539_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006622 451.0
BYD3_k127_4030539_5 synthase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 450.0
BYD3_k127_4030539_6 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 377.0
BYD3_k127_4030539_7 Protein of unknown function (DUF1295) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 321.0
BYD3_k127_4030539_8 Protein of unknown function (DUF1365) K09701 - - 0.000000000000000000000000000000000000000000000000000000000000000003259 237.0
BYD3_k127_4030539_9 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000000000004467 217.0
BYD3_k127_4076770_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 454.0
BYD3_k127_4076770_1 negative regulation of transcription, DNA-templated - - - 0.0000000000000001076 84.0
BYD3_k127_4076770_2 efflux transmembrane transporter activity - - - 0.000000000002134 75.0
BYD3_k127_4098336_0 Polyprenyl synthetase K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 360.0
BYD3_k127_4098336_1 SurA N-terminal domain K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 314.0
BYD3_k127_4098336_2 PFAM Formiminotransferase domain K00603,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000023 226.0
BYD3_k127_4098336_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000001142 213.0
BYD3_k127_4098336_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000001068 78.0
BYD3_k127_4098336_5 Domain of unknown function (DUF4321) - - - 0.0000000004651 63.0
BYD3_k127_4098336_6 Tetratricopeptide repeats - - - 0.00007942 55.0
BYD3_k127_4121683_0 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00651 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0008899,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016750,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 464.0
BYD3_k127_4121683_1 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 390.0
BYD3_k127_4121683_2 tail specific protease - - - 0.00000000000000000000000000000000000000000000000000000000000000005433 234.0
BYD3_k127_4121683_3 - - - - 0.0000000000000000000000000000000000000004195 153.0
BYD3_k127_4121683_4 Cytochrome C' - - - 0.00000000000000000000000000001981 128.0
BYD3_k127_4121683_5 It is involved in the biological process described with peptide metabolic process K00504,K12597,K18200 GO:0000003,GO:0002009,GO:0002165,GO:0003674,GO:0003824,GO:0004598,GO:0005575,GO:0005623,GO:0007275,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0007610,GO:0007617,GO:0007618,GO:0007619,GO:0008150,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0016829,GO:0016840,GO:0016842,GO:0019098,GO:0019953,GO:0022414,GO:0032501,GO:0032502,GO:0032504,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0036477,GO:0043025,GO:0044297,GO:0044464,GO:0044703,GO:0044719,GO:0048513,GO:0048563,GO:0048569,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0051704,GO:0060429,GO:0060562,GO:0065007,GO:0065008,GO:0090066,GO:0097458,GO:0140096 1.14.17.3,4.3.2.5 0.000000000000000007487 96.0
BYD3_k127_4121683_7 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000001745 81.0
BYD3_k127_4151497_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 484.0
BYD3_k127_4151497_1 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000000004668 149.0
BYD3_k127_4151497_2 YCII-related domain - - - 0.00000000000000000000000000003489 118.0
BYD3_k127_4151497_3 Mismatch repair ATPase (MutS family) - - - 0.00006045 46.0
BYD3_k127_4163964_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 552.0
BYD3_k127_4163964_1 CobW/HypB/UreG, nucleotide-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 509.0
BYD3_k127_4163964_10 Belongs to the carbamate kinase family K00926 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008804,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019546,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005755 331.0
BYD3_k127_4163964_11 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 331.0
BYD3_k127_4163964_12 Beta-lactamase superfamily domain K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000003186 270.0
BYD3_k127_4163964_13 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001177 268.0
BYD3_k127_4163964_14 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000002183 248.0
BYD3_k127_4163964_15 PFAM aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001899 240.0
BYD3_k127_4163964_16 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000002583 236.0
BYD3_k127_4163964_17 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000002086 187.0
BYD3_k127_4163964_18 NACHT domain K13730 - - 0.000000000000000000000000000000000000000001802 170.0
BYD3_k127_4163964_19 glucose sorbosone - - - 0.0000000000000000000000000000003696 134.0
BYD3_k127_4163964_2 O-methyltransferase activity - GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 539.0
BYD3_k127_4163964_20 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000008647 121.0
BYD3_k127_4163964_21 HxlR-like helix-turn-helix - - - 0.000000000000000000000000007155 119.0
BYD3_k127_4163964_22 Gluconate 2-dehydrogenase subunit 3 K06152 - 1.1.99.3 0.00000000000000000000009959 110.0
BYD3_k127_4163964_23 - - - - 0.000000000000000001995 94.0
BYD3_k127_4163964_24 cheY-homologous receiver domain - - - 0.0000000000009754 74.0
BYD3_k127_4163964_25 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000002459 60.0
BYD3_k127_4163964_26 PIN domain - - - 0.000000134 56.0
BYD3_k127_4163964_27 Amino acid kinase family K12524 - 1.1.1.3,2.7.2.4 0.000004292 59.0
BYD3_k127_4163964_3 Semialdehyde dehydrogenase, NAD binding domain K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 471.0
BYD3_k127_4163964_4 GMC oxidoreductase K06151 - 1.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 452.0
BYD3_k127_4163964_5 beta-lactamase activity K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 444.0
BYD3_k127_4163964_6 Peptidase dimerisation domain K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006746 408.0
BYD3_k127_4163964_7 Tetrahydrodipicolinate N-succinyltransferase N-terminal K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 376.0
BYD3_k127_4163964_8 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006583 350.0
BYD3_k127_4163964_9 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 339.0
BYD3_k127_4235720_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 2.719e-222 701.0
BYD3_k127_4235720_1 Cytochrome c-type biogenesis protein CcmF C-terminal K02198 - - 9.186e-197 636.0
BYD3_k127_4235720_10 FR47-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006828 258.0
BYD3_k127_4235720_11 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000003104 248.0
BYD3_k127_4235720_12 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000005071 241.0
BYD3_k127_4235720_13 ABC transporter K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000009122 216.0
BYD3_k127_4235720_14 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000002718 215.0
BYD3_k127_4235720_15 PFAM peptidase M16 domain protein - - - 0.00000000000000000000000000000000000000000000000000001274 213.0
BYD3_k127_4235720_16 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000008303 189.0
BYD3_k127_4235720_17 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000000003624 176.0
BYD3_k127_4235720_18 Belongs to the UPF0145 family - - - 0.00000000000000000000000000000000001408 139.0
BYD3_k127_4235720_19 ECF sigma factor K03088 - - 0.00000000000000000000000000002562 124.0
BYD3_k127_4235720_2 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 558.0
BYD3_k127_4235720_20 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000008804 118.0
BYD3_k127_4235720_21 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000000472 83.0
BYD3_k127_4235720_22 - - - - 0.000000006042 64.0
BYD3_k127_4235720_23 histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000196 65.0
BYD3_k127_4235720_3 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 484.0
BYD3_k127_4235720_4 Cys/Met metabolism PLP-dependent enzyme K01758 - 4.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000711 451.0
BYD3_k127_4235720_5 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 413.0
BYD3_k127_4235720_6 Belongs to the peptidase M16 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 410.0
BYD3_k127_4235720_7 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 393.0
BYD3_k127_4235720_8 Peptidase M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007611 289.0
BYD3_k127_4235720_9 CTP synthase K01937 - 6.3.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000005004 258.0
BYD3_k127_4243401_0 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 639.0
BYD3_k127_4243401_1 PFAM Aminotransferase class I and II K00814 - 2.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 570.0
BYD3_k127_4243401_10 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 345.0
BYD3_k127_4243401_11 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 332.0
BYD3_k127_4243401_12 PFAM Glutamate-cysteine ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007666 278.0
BYD3_k127_4243401_13 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000002939 269.0
BYD3_k127_4243401_14 Ion transport protein K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004189 262.0
BYD3_k127_4243401_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004144 264.0
BYD3_k127_4243401_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000001283 226.0
BYD3_k127_4243401_17 - - - - 0.00000000000000000000000000000000000000000000000000000000003556 227.0
BYD3_k127_4243401_18 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000002069 203.0
BYD3_k127_4243401_19 - K21572 - - 0.000000000000000000000000000000000000000000000000000002763 209.0
BYD3_k127_4243401_2 RimK-like ATPgrasp N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006662 549.0
BYD3_k127_4243401_20 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000000000001573 203.0
BYD3_k127_4243401_21 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000001625 198.0
BYD3_k127_4243401_22 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000006158 186.0
BYD3_k127_4243401_23 - - - - 0.0000000000000000000000000000000000000000000000002074 192.0
BYD3_k127_4243401_24 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000005119 166.0
BYD3_k127_4243401_25 - - - - 0.000000000000000000000000000000000002866 151.0
BYD3_k127_4243401_26 - - - - 0.00000000000000000000000000000000001232 154.0
BYD3_k127_4243401_27 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000147 141.0
BYD3_k127_4243401_28 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000008255 145.0
BYD3_k127_4243401_29 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000000000000000000000001325 122.0
BYD3_k127_4243401_3 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 554.0
BYD3_k127_4243401_30 domain protein K13735 - - 0.0000000000000000002365 102.0
BYD3_k127_4243401_31 TonB-linked outer membrane protein, SusC RagA family - - - 0.0000000000003319 80.0
BYD3_k127_4243401_32 Cupin domain - - - 0.000000000005462 75.0
BYD3_k127_4243401_34 F420H(2)-dependent quinone reductase - - - 0.000004147 59.0
BYD3_k127_4243401_4 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003416 552.0
BYD3_k127_4243401_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 550.0
BYD3_k127_4243401_6 PQQ-like domain K00114 - 1.1.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 501.0
BYD3_k127_4243401_7 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 512.0
BYD3_k127_4243401_8 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 412.0
BYD3_k127_4243401_9 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009835 330.0
BYD3_k127_4300431_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.193e-240 772.0
BYD3_k127_4300431_1 oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor K00311 GO:0003674,GO:0003824,GO:0004174,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016645,GO:0016649,GO:0016722,GO:0017133,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032592,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043783,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045251,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070013,GO:0098573,GO:0098798,GO:1902494,GO:1990204 1.5.5.1 6.029e-201 640.0
BYD3_k127_4300431_2 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 1.313e-195 627.0
BYD3_k127_4300431_3 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 559.0
BYD3_k127_4300431_4 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 346.0
BYD3_k127_4300431_5 PFAM HhH-GPD superfamily base excision DNA repair protein K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001506 266.0
BYD3_k127_4300431_6 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000002811 163.0
BYD3_k127_4300431_7 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.000000000000000000000000000000004766 140.0
BYD3_k127_4300431_8 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000134 71.0
BYD3_k127_4300431_9 PFAM NUDIX hydrolase K07455 - - 0.000001178 56.0
BYD3_k127_4350318_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 2.034e-316 1006.0
BYD3_k127_4350318_1 MatE K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 394.0
BYD3_k127_4350318_10 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000000009354 201.0
BYD3_k127_4350318_11 ABC transporter K02003 - - 0.0000000000000000000000000000000000000114 147.0
BYD3_k127_4350318_12 - - - - 0.0000000000000000000000000000000002754 148.0
BYD3_k127_4350318_13 Protein of unknown function (DUF1761) - - - 0.000000000000000000000000000000001291 141.0
BYD3_k127_4350318_14 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000005975 132.0
BYD3_k127_4350318_15 Helix-turn-helix domain - - - 0.00000000000000000000000000000002879 136.0
BYD3_k127_4350318_16 - - - - 0.000000000000000000000000000006236 124.0
BYD3_k127_4350318_17 Ribonuclease B OB domain K03704 - - 0.00000000000000000000000001195 110.0
BYD3_k127_4350318_18 WHG domain - - - 0.000000000000000000002192 102.0
BYD3_k127_4350318_19 RF-1 domain - - - 0.000000000000000000287 97.0
BYD3_k127_4350318_2 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006147 372.0
BYD3_k127_4350318_3 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005573 349.0
BYD3_k127_4350318_4 Alpha/beta hydrolase family K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001665 265.0
BYD3_k127_4350318_5 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003629 269.0
BYD3_k127_4350318_6 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000008749 224.0
BYD3_k127_4350318_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000005667 222.0
BYD3_k127_4350318_8 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000003332 223.0
BYD3_k127_4350318_9 - - - - 0.00000000000000000000000000000000000000000000000000000002541 222.0
BYD3_k127_4350825_0 5TM C-terminal transporter carbon starvation CstA K06200 - - 1.325e-229 727.0
BYD3_k127_4350825_1 Amidohydrolase family K06015 - 3.5.1.81 1.638e-198 634.0
BYD3_k127_4350825_10 - - - - 0.0000000000000000000000000000000001416 133.0
BYD3_k127_4350825_11 - - - - 0.00000000000000000799 91.0
BYD3_k127_4350825_12 Bacterial Ig-like domain 2 - - - 0.0000111 56.0
BYD3_k127_4350825_13 MarR family - - - 0.0009548 51.0
BYD3_k127_4350825_2 COGs COG0003 ATPase involved in chromosome partitioning K01551 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 322.0
BYD3_k127_4350825_3 PFAM Integral membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 304.0
BYD3_k127_4350825_4 PFAM amine oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001893 255.0
BYD3_k127_4350825_5 Belongs to the glycosyl hydrolase family 6 K21104 - 3.1.1.101 0.000000000000000000000000000000000000000000000000005813 196.0
BYD3_k127_4350825_6 Large-conductance mechanosensitive channel, MscL K03282 - - 0.00000000000000000000000000000000000000000000000001562 192.0
BYD3_k127_4350825_7 ABC transporter K02003 - - 0.0000000000000000000000000000000000000114 147.0
BYD3_k127_4350825_8 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000002183 147.0
BYD3_k127_4350825_9 - - - - 0.0000000000000000000000000000000000003403 152.0
BYD3_k127_4354465_0 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 7.966e-296 933.0
BYD3_k127_4354465_1 Spermine/spermidine synthase domain - - - 1.591e-251 801.0
BYD3_k127_4354465_10 Methyltransferase small domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007446 256.0
BYD3_k127_4354465_11 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000007875 261.0
BYD3_k127_4354465_12 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000002405 215.0
BYD3_k127_4354465_13 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000449 209.0
BYD3_k127_4354465_14 O-methyltransferase activity K05303 - - 0.000000000000000000000000000000000000000000000000000000007385 217.0
BYD3_k127_4354465_15 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000004526 202.0
BYD3_k127_4354465_16 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.00000000000000000000000000000000000000000000000000003988 198.0
BYD3_k127_4354465_17 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000001766 194.0
BYD3_k127_4354465_19 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion - - - 0.0000000000000000000000000000000000001366 155.0
BYD3_k127_4354465_2 B12 binding domain K04034 - 1.21.98.3 8.038e-226 710.0
BYD3_k127_4354465_20 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000002542 153.0
BYD3_k127_4354465_21 ApaG domain K06195 - - 0.000000000000000000000000000000000001161 144.0
BYD3_k127_4354465_22 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000004177 106.0
BYD3_k127_4354465_23 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000001708 67.0
BYD3_k127_4354465_24 Copper binding proteins, plastocyanin/azurin family - - - 0.00000002334 61.0
BYD3_k127_4354465_25 Prepilin-type N-terminal cleavage methylation domain K02456,K02650 - - 0.0004983 49.0
BYD3_k127_4354465_3 POT family K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 599.0
BYD3_k127_4354465_4 radical SAM domain protein K04034 - 1.21.98.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 566.0
BYD3_k127_4354465_5 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000688 359.0
BYD3_k127_4354465_6 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 346.0
BYD3_k127_4354465_7 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004307 286.0
BYD3_k127_4354465_8 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004698 281.0
BYD3_k127_4354465_9 Aldehyde dehydrogenase family K00128,K00135 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000001018 264.0
BYD3_k127_4355589_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 581.0
BYD3_k127_4355589_1 PFAM magnesium chelatase ChlI subunit K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009255 562.0
BYD3_k127_4355589_10 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000001308 197.0
BYD3_k127_4355589_11 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000009488 188.0
BYD3_k127_4355589_12 Ribosomal protein S9/S16 K02996 - - 0.000000000000000000000000000000000000002088 151.0
BYD3_k127_4355589_13 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000006176 125.0
BYD3_k127_4355589_14 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000003358 117.0
BYD3_k127_4355589_15 Macrophage metalloelastase K01388,K01394,K01396,K01402,K01413,K07763,K07994,K07999 GO:0000122,GO:0001047,GO:0001067,GO:0001101,GO:0001666,GO:0001817,GO:0001819,GO:0001959,GO:0001960,GO:0001961,GO:0002009,GO:0002011,GO:0002682,GO:0002683,GO:0002684,GO:0002697,GO:0002791,GO:0002793,GO:0002831,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004175,GO:0004222,GO:0004252,GO:0005488,GO:0005509,GO:0005518,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0006355,GO:0006357,GO:0006508,GO:0006606,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006928,GO:0006950,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008237,GO:0008270,GO:0008284,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009611,GO:0009615,GO:0009628,GO:0009653,GO:0009719,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010310,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010727,GO:0010762,GO:0010763,GO:0010941,GO:0010942,GO:0014070,GO:0014910,GO:0014911,GO:0015031,GO:0015833,GO:0016043,GO:0016477,GO:0016787,GO:0017038,GO:0017171,GO:0019219,GO:0019222,GO:0019538,GO:0022411,GO:0022617,GO:0023051,GO:0023056,GO:0023057,GO:0030163,GO:0030198,GO:0030334,GO:0030335,GO:0030425,GO:0030574,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031334,GO:0031347,GO:0031348,GO:0031349,GO:0032101,GO:0032459,GO:0032461,GO:0032479,GO:0032481,GO:0032502,GO:0032647,GO:0032727,GO:0032879,GO:0032880,GO:0032963,GO:0032991,GO:0033036,GO:0033365,GO:0034504,GO:0034613,GO:0035313,GO:0036293,GO:0036477,GO:0040011,GO:0040012,GO:0040017,GO:0042060,GO:0042127,GO:0042221,GO:0042493,GO:0042886,GO:0042995,GO:0043005,GO:0043062,GO:0043167,GO:0043169,GO:0043170,GO:0043200,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043565,GO:0043900,GO:0044087,GO:0044089,GO:0044212,GO:0044238,GO:0044297,GO:0044319,GO:0044421,GO:0044424,GO:0044444,GO:0044463,GO:0044464,GO:0044877,GO:0045088,GO:0045089,GO:0045184,GO:0045824,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046872,GO:0046907,GO:0046914,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048729,GO:0048856,GO:0048870,GO:0050678,GO:0050679,GO:0050688,GO:0050691,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050776,GO:0050777,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051193,GO:0051195,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051252,GO:0051253,GO:0051254,GO:0051270,GO:0051272,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0051896,GO:0051898,GO:0060054,GO:0060255,GO:0060338,GO:0060339,GO:0060340,GO:0060429,GO:0060759,GO:0060760,GO:0060761,GO:0065007,GO:0070011,GO:0070201,GO:0070482,GO:0070727,GO:0070887,GO:0071229,GO:0071230,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090504,GO:0090505,GO:0097159,GO:0097447,GO:0097458,GO:0098586,GO:0120025,GO:0120038,GO:0140096,GO:1900407,GO:1900409,GO:1901163,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902532,GO:1902679,GO:1902680,GO:1902739,GO:1902741,GO:1902882,GO:1902884,GO:1903201,GO:1903209,GO:1903506,GO:1903507,GO:1903508,GO:1903530,GO:1903532,GO:1904951,GO:2000026,GO:2000112,GO:2000113,GO:2000145,GO:2000147,GO:2000241,GO:2000377,GO:2000378,GO:2001141 3.4.24.17,3.4.24.22,3.4.24.34,3.4.24.65,3.4.24.7,3.4.24.80 0.000007936 57.0
BYD3_k127_4355589_2 cobalamin-transporting ATPase activity K02014,K16092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005283 469.0
BYD3_k127_4355589_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 406.0
BYD3_k127_4355589_4 Ribosomal protein S2 K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 325.0
BYD3_k127_4355589_5 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 312.0
BYD3_k127_4355589_6 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002158 275.0
BYD3_k127_4355589_7 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000002382 240.0
BYD3_k127_4355589_8 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000003492 254.0
BYD3_k127_4355589_9 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000007535 224.0
BYD3_k127_4468664_0 - - - - 5.567e-200 647.0
BYD3_k127_4468664_1 electron transfer activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008286 420.0
BYD3_k127_4468664_10 - - - - 0.0000001009 59.0
BYD3_k127_4468664_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 297.0
BYD3_k127_4468664_3 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000007015 209.0
BYD3_k127_4468664_4 Transcriptional regulator - - - 0.000000000000000000000000000000000000000009103 162.0
BYD3_k127_4468664_5 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000002743 160.0
BYD3_k127_4468664_6 Domain of unknown function (DUF4142) K08995 - - 0.00000000000000000000000000000000000002541 150.0
BYD3_k127_4468664_7 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000001464 113.0
BYD3_k127_4468664_8 Cupin domain - - - 0.000000000000000001503 93.0
BYD3_k127_4468664_9 Cupredoxin-like domain - - - 0.000000000000002375 81.0
BYD3_k127_4477436_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 444.0
BYD3_k127_4477436_1 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000006173 256.0
BYD3_k127_4477436_2 [2Fe-2S] binding domain K07302,K13483 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000007369 198.0
BYD3_k127_4477436_3 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000003158 154.0
BYD3_k127_4477436_4 - - - - 0.000002679 51.0
BYD3_k127_4508727_0 - - - - 0.00000000000000000000000004739 123.0
BYD3_k127_4508727_1 membrane - - - 0.00000000000000002105 89.0
BYD3_k127_4572587_0 Aldolase K01623 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007115 395.0
BYD3_k127_4572587_1 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 305.0
BYD3_k127_4572587_2 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000003148 266.0
BYD3_k127_4572587_3 symporter activity K03307 - - 0.0000000000000000000000000000000001741 138.0
BYD3_k127_4576455_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 1.431e-197 624.0
BYD3_k127_4576455_1 Ftsk_gamma K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 626.0
BYD3_k127_4576455_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000004915 196.0
BYD3_k127_4576455_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000102 196.0
BYD3_k127_4576455_4 Belongs to the ComB family K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.000000000000000000000000000000000000000000000001472 183.0
BYD3_k127_4576455_5 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000423 176.0
BYD3_k127_4576455_6 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000383 144.0
BYD3_k127_4576455_7 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000000000000000000005493 104.0
BYD3_k127_4612642_0 Phospholipase D. Active site motifs. K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006874 539.0
BYD3_k127_4612642_1 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008802 318.0
BYD3_k127_4612642_2 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 292.0
BYD3_k127_4612642_3 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000009114 207.0
BYD3_k127_4612642_4 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000000000000000008832 123.0
BYD3_k127_4612642_5 positive regulation of growth - - - 0.00000005215 58.0
BYD3_k127_4612642_6 positive regulation of growth - GO:0008150,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0065007 - 0.0000005779 57.0
BYD3_k127_4612642_7 PIN domain - - - 0.00001842 54.0
BYD3_k127_4613468_0 Malate synthase K01638 - 2.3.3.9 6.948e-289 902.0
BYD3_k127_4613468_1 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 1.51e-244 782.0
BYD3_k127_4613468_10 Protein of unknown function (DUF1326) - - - 0.00000001251 64.0
BYD3_k127_4613468_2 PQQ-like domain K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 359.0
BYD3_k127_4613468_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001686 280.0
BYD3_k127_4613468_4 Acetyltransferase, gnat family - - - 0.0000000000000000000000000000000000000000000000000000000000008035 216.0
BYD3_k127_4613468_5 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000007659 145.0
BYD3_k127_4613468_6 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000000000000000000000000000000000455 154.0
BYD3_k127_4613468_7 - - - - 0.00000000000000000000000000000000001005 145.0
BYD3_k127_4613468_8 Uncharacterized conserved protein (DUF2277) - - - 0.0000000000000000000000000000000002641 133.0
BYD3_k127_4613468_9 aminopeptidase activity - - - 0.000000000000000000000000000000185 141.0
BYD3_k127_4623082_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 486.0
BYD3_k127_4623082_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000642 458.0
BYD3_k127_4623082_10 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF K07402 - - 0.000000000001722 79.0
BYD3_k127_4623082_2 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008851 401.0
BYD3_k127_4623082_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008099 377.0
BYD3_k127_4623082_4 PSP1 C-terminal conserved region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 303.0
BYD3_k127_4623082_5 Belongs to the short-chain dehydrogenases reductases (SDR) family K05886 - 1.1.1.276 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005447 288.0
BYD3_k127_4623082_6 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000007054 170.0
BYD3_k127_4623082_7 Peptidase, M23 - - - 0.0000000000000000000000000000000000000827 154.0
BYD3_k127_4623082_8 Response regulator receiver - - - 0.00000000000000000000000000000009358 137.0
BYD3_k127_4623082_9 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.000000000000000000000000003004 127.0
BYD3_k127_4631162_0 Sodium:solute symporter family - - - 1.255e-226 714.0
BYD3_k127_4631162_1 PFAM LmbE family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006418 492.0
BYD3_k127_4631162_10 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000002748 151.0
BYD3_k127_4631162_11 40-residue YVTN family beta-propeller repeat protein - - - 0.0000000000000006586 91.0
BYD3_k127_4631162_12 cAMP biosynthetic process - - - 0.00000000000001756 83.0
BYD3_k127_4631162_13 - - - - 0.00000000005903 74.0
BYD3_k127_4631162_14 ABC transporter substrate-binding protein PnrA-like K02058,K05519,K07335 - - 0.00006142 47.0
BYD3_k127_4631162_2 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 421.0
BYD3_k127_4631162_3 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 347.0
BYD3_k127_4631162_4 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 346.0
BYD3_k127_4631162_5 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007727 317.0
BYD3_k127_4631162_6 Branched-chain amino acid transport system / permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 314.0
BYD3_k127_4631162_7 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000001081 249.0
BYD3_k127_4631162_8 protein containing caspase domain - - - 0.000000000000000000000000000000000000000000009852 183.0
BYD3_k127_4631162_9 curli production assembly transport component CsgG K04087 - - 0.000000000000000000000000000000000001367 156.0
BYD3_k127_4635698_0 asparagine K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003473 605.0
BYD3_k127_4635698_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 365.0
BYD3_k127_4635698_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 351.0
BYD3_k127_4635698_3 PFAM AMP-dependent synthetase and ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004251 347.0
BYD3_k127_4635698_4 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 315.0
BYD3_k127_4635698_5 COGs COG2912 conserved - - - 0.000000000000000000000000000000000000000000000000000000000007573 230.0
BYD3_k127_4635698_6 Glycine cleavage T-protein C-terminal barrel domain K06980 - - 0.0000000000000000000000000002445 131.0
BYD3_k127_4635698_7 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.00000003189 58.0
BYD3_k127_4657930_0 AbgT putative transporter family K12942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 575.0
BYD3_k127_4657930_1 Pyrimidine nucleoside phosphorylase C-terminal domain K00756 - 2.4.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006397 431.0
BYD3_k127_4657930_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000001138 254.0
BYD3_k127_4657930_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000006733 158.0
BYD3_k127_4657930_4 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000000007145 106.0
BYD3_k127_4657930_5 Transglycosylase K21464 - 2.4.1.129,3.4.16.4 0.0000000000000000005715 91.0
BYD3_k127_4657930_6 4-vinyl reductase, 4VR - - - 0.000000005908 64.0
BYD3_k127_4657930_7 YtxH-like protein - - - 0.0000009727 54.0
BYD3_k127_4688010_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 6.326e-280 867.0
BYD3_k127_4688010_1 Carbohydrate family 9 binding domain-like - - - 8.899e-237 760.0
BYD3_k127_4688010_10 type II secretion system protein E K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 366.0
BYD3_k127_4688010_11 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 329.0
BYD3_k127_4688010_12 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000421 350.0
BYD3_k127_4688010_13 Phage integrase, N-terminal SAM-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007866 291.0
BYD3_k127_4688010_14 HEAT repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000007391 259.0
BYD3_k127_4688010_15 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001074 237.0
BYD3_k127_4688010_16 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000181 238.0
BYD3_k127_4688010_17 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000001428 219.0
BYD3_k127_4688010_18 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000001402 212.0
BYD3_k127_4688010_19 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.1.33 0.00000000000000000000000000000000000000000000000000001359 198.0
BYD3_k127_4688010_2 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 571.0
BYD3_k127_4688010_20 Uncharacterized protein conserved in bacteria (DUF2200) - - - 0.00000000000000000000000000000000000000000000000000001574 190.0
BYD3_k127_4688010_21 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000000003867 204.0
BYD3_k127_4688010_22 TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000014 209.0
BYD3_k127_4688010_23 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000002136 175.0
BYD3_k127_4688010_24 - - - - 0.000000000000000000000000000000000000000000002439 178.0
BYD3_k127_4688010_25 Uncharacterized ACR, COG1678 K07735 - - 0.00000000000000000000000000000000000000000003513 179.0
BYD3_k127_4688010_26 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000007853 171.0
BYD3_k127_4688010_27 PFAM Phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000005231 166.0
BYD3_k127_4688010_28 DinB family - - - 0.0000000000000000000000000000000000001483 148.0
BYD3_k127_4688010_29 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000000000000000000001503 138.0
BYD3_k127_4688010_3 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 552.0
BYD3_k127_4688010_30 Beta-lactamase - - - 0.000000000000000000000000000000001162 137.0
BYD3_k127_4688010_31 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.00000000000000000000000000004289 131.0
BYD3_k127_4688010_34 ABC transporter K02003 - - 0.000000000000008248 75.0
BYD3_k127_4688010_4 acyl-CoA dehydrogenase activity K22027 - 1.14.13.235 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 533.0
BYD3_k127_4688010_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007846 463.0
BYD3_k127_4688010_6 Glycosyl transferase 4-like K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 418.0
BYD3_k127_4688010_7 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 426.0
BYD3_k127_4688010_8 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0000018,GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0032300,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 392.0
BYD3_k127_4688010_9 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009346 381.0
BYD3_k127_4703947_0 Aldehyde dehydrogenase family K00128,K00135 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 593.0
BYD3_k127_4703947_1 Protein of unknown function (DUF445) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009363 488.0
BYD3_k127_4703947_10 Protein of unknown function (DUF1194) K07114 - - 0.00000000000000000000000000000000005465 148.0
BYD3_k127_4703947_11 - - - - 0.00000000000000000000000000000000523 138.0
BYD3_k127_4703947_12 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.00000000000000002982 96.0
BYD3_k127_4703947_14 Tetratricopeptide repeat - - - 0.0000000248 67.0
BYD3_k127_4703947_2 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 381.0
BYD3_k127_4703947_3 amino acid K20265 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 339.0
BYD3_k127_4703947_4 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002631 254.0
BYD3_k127_4703947_5 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004809 224.0
BYD3_k127_4703947_6 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000004784 229.0
BYD3_k127_4703947_7 DinB family - - - 0.00000000000000000000000000000000000000000000000000000000001513 212.0
BYD3_k127_4703947_8 N-formylglutamate amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000005002 219.0
BYD3_k127_4703947_9 Glutamate-cysteine ligase family 2(GCS2) - - - 0.000000000000000000000000000000000000000000000003074 180.0
BYD3_k127_4721469_0 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 473.0
BYD3_k127_4721469_1 Beta-eliminating lyase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 406.0
BYD3_k127_4721469_10 transport system K01992 - - 0.0000000000000000000000000000000000000000000000000000000000006068 233.0
BYD3_k127_4721469_11 Protein of Unknown function (DUF2784) - - - 0.0000000000000000000000000000000000006916 143.0
BYD3_k127_4721469_12 MOSC domain - - - 0.0000000000000000000000000000000002413 137.0
BYD3_k127_4721469_13 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000006421 139.0
BYD3_k127_4721469_14 PQQ-like domain K00117 - 1.1.5.2 0.000000000000000000000000000000001398 143.0
BYD3_k127_4721469_15 Cold shock K03704 - - 0.00000000000000000000000000000003234 126.0
BYD3_k127_4721469_16 Domain of unknown function (DU1801) - - - 0.0000000000000000001464 97.0
BYD3_k127_4721469_17 Domain of unknown function (DU1801) - - - 0.00000000004435 67.0
BYD3_k127_4721469_19 Peptidase family M28 - - - 0.00001381 58.0
BYD3_k127_4721469_2 PFAM Major facilitator superfamily K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 352.0
BYD3_k127_4721469_3 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007279 312.0
BYD3_k127_4721469_4 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104 303.0
BYD3_k127_4721469_5 PFAM Phenazine biosynthesis PhzC PhzF protein K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 295.0
BYD3_k127_4721469_6 uracil-DNA glycosylase K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033958,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003119 275.0
BYD3_k127_4721469_7 methionine sulfoxide reductase K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000003982 265.0
BYD3_k127_4721469_8 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003298 267.0
BYD3_k127_4721469_9 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) - - - 0.00000000000000000000000000000000000000000000000000000000000006508 223.0
BYD3_k127_4747780_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 4.087e-238 749.0
BYD3_k127_4747780_1 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000000000000000000004241 131.0
BYD3_k127_4747780_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000007 139.0
BYD3_k127_4747780_3 Tetratricopeptide repeat - - - 0.00000000000000002753 89.0
BYD3_k127_4747780_4 SnoaL-like polyketide cyclase - - - 0.000000000000003721 81.0
BYD3_k127_4747780_5 Thioesterase-like superfamily - - - 0.0000000002719 68.0
BYD3_k127_4824183_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000677 558.0
BYD3_k127_4824183_1 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 494.0
BYD3_k127_4824183_10 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007918 348.0
BYD3_k127_4824183_11 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 341.0
BYD3_k127_4824183_12 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 326.0
BYD3_k127_4824183_13 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 319.0
BYD3_k127_4824183_14 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 306.0
BYD3_k127_4824183_15 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000001401 256.0
BYD3_k127_4824183_16 DNA recombination-mediator protein A K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000531 239.0
BYD3_k127_4824183_17 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000009052 225.0
BYD3_k127_4824183_18 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.00000000000000000000000000000000000000000000000000000000001619 214.0
BYD3_k127_4824183_19 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000001912 215.0
BYD3_k127_4824183_2 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00263 - 1.4.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009411 455.0
BYD3_k127_4824183_20 EXOIII K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000001949 195.0
BYD3_k127_4824183_21 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000005135 171.0
BYD3_k127_4824183_22 STAS domain K04749 - - 0.0000000000000000000000000000000000000000006035 168.0
BYD3_k127_4824183_23 PFAM Histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000000000004438 142.0
BYD3_k127_4824183_24 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000000000000000000001892 149.0
BYD3_k127_4824183_25 Methylates ribosomal protein L11 K02687 - - 0.00000000000000000000000000000000003651 147.0
BYD3_k127_4824183_26 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000008958 149.0
BYD3_k127_4824183_27 - - - - 0.0000000000000000000000000000000001741 138.0
BYD3_k127_4824183_28 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000467 135.0
BYD3_k127_4824183_29 PFAM BioY protein K03523 - - 0.00000000000000000000000000001229 127.0
BYD3_k127_4824183_3 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 475.0
BYD3_k127_4824183_30 Yqey-like protein K09117 - - 0.0000000000000000000000000001097 121.0
BYD3_k127_4824183_31 - - - - 0.00000000000000000000000002658 109.0
BYD3_k127_4824183_32 Histidine kinase-like ATPase domain - - - 0.00000000000000000000009165 103.0
BYD3_k127_4824183_34 Zn-ribbon protein, possibly nucleic acid-binding K07164 - - 0.0000000004588 70.0
BYD3_k127_4824183_4 DHH family K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005983 444.0
BYD3_k127_4824183_5 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 426.0
BYD3_k127_4824183_6 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007911 424.0
BYD3_k127_4824183_7 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008333 402.0
BYD3_k127_4824183_8 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 379.0
BYD3_k127_4824183_9 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 379.0
BYD3_k127_4892974_0 PFAM Lanthionine synthetase - - - 1.77e-252 812.0
BYD3_k127_4892974_1 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 372.0
BYD3_k127_4892974_2 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003257 268.0
BYD3_k127_4892974_3 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000000002003 198.0
BYD3_k127_4892974_4 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.00002208 49.0
BYD3_k127_4894984_0 MacB-like periplasmic core domain K02004 - - 1.84e-200 661.0
BYD3_k127_4894984_1 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 421.0
BYD3_k127_4894984_10 Domain of unknown function (DUF4154) - - - 0.0000000004963 67.0
BYD3_k127_4894984_11 Rieske [2Fe-2S] domain - - - 0.0000001134 64.0
BYD3_k127_4894984_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009829 326.0
BYD3_k127_4894984_3 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008633 321.0
BYD3_k127_4894984_4 Inner membrane component of T3SS, cytoplasmic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000009989 262.0
BYD3_k127_4894984_5 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005752 250.0
BYD3_k127_4894984_6 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000003259 214.0
BYD3_k127_4894984_7 nitric oxide dioxygenase activity - - - 0.00000000000000000000000585 106.0
BYD3_k127_4894984_8 COG2070 Dioxygenases related to 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.0000000000000008131 77.0
BYD3_k127_4894984_9 negative regulation of transcription, DNA-templated - - - 0.00000000000006282 75.0
BYD3_k127_4896342_0 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005673 288.0
BYD3_k127_4896342_1 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003188 282.0
BYD3_k127_4896342_2 Protein tyrosine kinase - - - 0.000000000000000000000000000499 115.0
BYD3_k127_4896342_3 - - - - 0.000000000000002845 83.0
BYD3_k127_489636_0 ABC transporter, ATP-binding protein K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000515 273.0
BYD3_k127_489636_1 PFAM AMP-dependent synthetase and ligase K00666 - - 0.00000000000000000000000000000000000000000000000000000000000002625 229.0
BYD3_k127_489636_2 COG1668 ABC-type Na efflux pump, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000003682 233.0
BYD3_k127_489636_3 Acyl-CoA reductase (LuxC) - - - 0.000000000000000000000000000000000000000000000000003279 206.0
BYD3_k127_489636_4 Peptide synthetase - - - 0.0001975 48.0
BYD3_k127_4909817_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 362.0
BYD3_k127_4909817_1 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001297 262.0
BYD3_k127_4909817_2 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000003698 229.0
BYD3_k127_4909817_3 PFAM Response regulator receiver domain K07668 - - 0.0000000000000000000000000000000000000000000000000000000000001089 230.0
BYD3_k127_4909817_4 phosphorelay signal transduction system - - - 0.000000000000000000000000000846 117.0
BYD3_k127_4909817_5 HEAT repeats - - - 0.0000000000000000000000007538 115.0
BYD3_k127_4909817_6 Diguanylate cyclase - - - 0.0000000000000000004491 104.0
BYD3_k127_4909817_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00001482 52.0
BYD3_k127_4919881_0 MotA/TolQ/ExbB proton channel family K03562 - - 0.00000000000000000000000000000000000000000000000000000000000006464 223.0
BYD3_k127_4919881_1 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000001913 168.0
BYD3_k127_4919881_2 Cupin domain - - - 0.00000000000000000000000000000000000003505 144.0
BYD3_k127_4919881_3 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.000000007581 59.0
BYD3_k127_4919881_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000003815 64.0
BYD3_k127_4923956_0 DNA topoisomerase II activity K02469 - 5.99.1.3 4.498e-247 788.0
BYD3_k127_4923956_1 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 2.874e-235 745.0
BYD3_k127_4923956_10 Saccharopine dehydrogenase C-terminal domain K19064 - 1.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 383.0
BYD3_k127_4923956_11 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 379.0
BYD3_k127_4923956_12 PA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003481 338.0
BYD3_k127_4923956_13 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006568 319.0
BYD3_k127_4923956_14 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000001832 237.0
BYD3_k127_4923956_15 histidyl-tRNA synthetase - - - 0.0000000000000000000000000000000000000000000000000000001239 211.0
BYD3_k127_4923956_16 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000001205 198.0
BYD3_k127_4923956_17 - - - - 0.000000000000000000000000000000000000000000000000002549 193.0
BYD3_k127_4923956_18 - - - - 0.00000000000000000000000000000002262 132.0
BYD3_k127_4923956_19 metal-sulfur cluster biosynthetic - - - 0.000000000000000000000000000001645 123.0
BYD3_k127_4923956_2 PFAM Homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 1.219e-196 619.0
BYD3_k127_4923956_20 Protein of unknown function (DUF418) K07148 - - 0.00000000000000000000000000008425 123.0
BYD3_k127_4923956_21 Caspase domain - - - 0.000000000000000000000000002032 130.0
BYD3_k127_4923956_22 - - - - 0.00000000000000001315 92.0
BYD3_k127_4923956_23 CAAX protease self-immunity - - - 0.000000000002299 78.0
BYD3_k127_4923956_3 Fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 538.0
BYD3_k127_4923956_4 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 500.0
BYD3_k127_4923956_5 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 451.0
BYD3_k127_4923956_6 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004936 414.0
BYD3_k127_4923956_7 Phenylalanine-4-hydroxylase K00500 GO:0003674,GO:0003824,GO:0004497,GO:0004505,GO:0006082,GO:0006520,GO:0006558,GO:0006559,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016705,GO:0016714,GO:0017144,GO:0019439,GO:0019752,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902221,GO:1902222 1.14.16.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006544 413.0
BYD3_k127_4923956_8 COG0076 Glutamate decarboxylase and related PLP-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 406.0
BYD3_k127_4923956_9 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 401.0
BYD3_k127_4935844_0 HELICc2 K03722 - 3.6.4.12 4.183e-217 705.0
BYD3_k127_4935844_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009323 487.0
BYD3_k127_4935844_2 Aminotransferase class I and II K10206 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 301.0
BYD3_k127_4935844_3 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001066 244.0
BYD3_k127_4935844_4 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000005449 211.0
BYD3_k127_4935844_5 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division K20543 - - 0.0000008686 62.0
BYD3_k127_5102258_0 Voltage gated chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 407.0
BYD3_k127_5102258_1 - - - - 0.0000000000000000000000000000000000000001698 162.0
BYD3_k127_5167066_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1445.0
BYD3_k127_5167066_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 6.034e-245 786.0
BYD3_k127_5167066_10 PFAM Metal-dependent phosphohydrolase, HD - - - 0.00000000000000000000000000000000000000000000000003815 184.0
BYD3_k127_5167066_11 TIGRFAM M6 family metalloprotease domain - - - 0.000000000000000000000000000000000000000001043 180.0
BYD3_k127_5167066_12 ECF sigma factor K03088 - - 0.00000000000000000000000000000003347 139.0
BYD3_k127_5167066_13 Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins K07400 - - 0.0000000000000000000000000000006932 129.0
BYD3_k127_5167066_14 Sigma-70 region 2 K03088 - - 0.00000000000000000000000237 108.0
BYD3_k127_5167066_15 Zincin-like metallopeptidase - - - 0.000000000000000000002071 103.0
BYD3_k127_5167066_16 metallopeptidase activity K21449 - - 0.000002737 61.0
BYD3_k127_5167066_17 TonB-dependent Receptor Plug Domain - - - 0.00001577 57.0
BYD3_k127_5167066_2 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009345,GO:0009987,GO:0010467,GO:0016070,GO:0016594,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042165,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.14 1.643e-202 639.0
BYD3_k127_5167066_3 Metallopeptidase family M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006224 372.0
BYD3_k127_5167066_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 345.0
BYD3_k127_5167066_5 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 312.0
BYD3_k127_5167066_6 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 284.0
BYD3_k127_5167066_7 PFAM Histone deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002881 306.0
BYD3_k127_5167066_8 HNH nucleases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003773 258.0
BYD3_k127_5167066_9 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000135 215.0
BYD3_k127_5201849_0 Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family K03455 - - 1.972e-220 696.0
BYD3_k127_5201849_1 Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 518.0
BYD3_k127_5201849_10 mannosyl-inositol phosphorylceramide biosynthetic process - GO:0000030,GO:0000139,GO:0003674,GO:0003824,GO:0005488,GO:0005537,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005801,GO:0005802,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006665,GO:0006673,GO:0006675,GO:0006687,GO:0006688,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0019637,GO:0030148,GO:0030246,GO:0031090,GO:0031984,GO:0032588,GO:0033106,GO:0036094,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046467,GO:0048029,GO:0051999,GO:0070085,GO:0071704,GO:0090407,GO:0097502,GO:0098588,GO:0098791,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509 - 0.000000000000000000000000000000000000000001487 166.0
BYD3_k127_5201849_11 PFAM UspA domain protein - - - 0.000000000000000000000000000000000004258 153.0
BYD3_k127_5201849_12 - - - - 0.0000000000000000000000000000000000142 145.0
BYD3_k127_5201849_13 - - - - 0.0000000000000000000000000000000001313 139.0
BYD3_k127_5201849_14 lysyltransferase activity K07027,K08256 - 2.4.1.345 0.0000000000000000000000000000026 133.0
BYD3_k127_5201849_15 Universal stress protein family - - - 0.00000000000000000001469 97.0
BYD3_k127_5201849_16 Universal stress protein family - - - 0.00000000000007195 82.0
BYD3_k127_5201849_17 translation release factor activity - - - 0.000000009369 67.0
BYD3_k127_5201849_18 Universal stress protein family - - - 0.000005268 57.0
BYD3_k127_5201849_2 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 384.0
BYD3_k127_5201849_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 350.0
BYD3_k127_5201849_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 328.0
BYD3_k127_5201849_5 ornithine cyclodeaminase activity K01750,K18258,K19244 - 1.4.1.1,1.5.1.25,4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 297.0
BYD3_k127_5201849_6 Astacin (Peptidase family M12A) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007689 266.0
BYD3_k127_5201849_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000003005 215.0
BYD3_k127_5201849_8 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000002463 207.0
BYD3_k127_5201849_9 Membrane - - - 0.0000000000000000000000000000000000000000000000005483 181.0
BYD3_k127_5210089_0 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005348 629.0
BYD3_k127_5210089_1 metallocarboxypeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 608.0
BYD3_k127_5210089_10 - - - - 0.000000000000000000000000000000000000000000000000000000007215 204.0
BYD3_k127_5210089_11 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000009123 168.0
BYD3_k127_5210089_12 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000009511 148.0
BYD3_k127_5210089_13 - - - - 0.000000000000000000000000002509 124.0
BYD3_k127_5210089_14 TPR repeat - - - 0.0000000000000000001019 104.0
BYD3_k127_5210089_15 Domain of unknown function (DUF4399) - - - 0.000000000001928 79.0
BYD3_k127_5210089_16 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000003283 65.0
BYD3_k127_5210089_17 TonB dependent receptor - - - 0.00000005093 59.0
BYD3_k127_5210089_19 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0005102 43.0
BYD3_k127_5210089_2 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 497.0
BYD3_k127_5210089_3 Aminotransferase K00813,K00832 GO:0003674,GO:0003824,GO:0004069,GO:0004838,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006531,GO:0006532,GO:0006551,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0008793,GO:0009058,GO:0009066,GO:0009067,GO:0009072,GO:0009073,GO:0009081,GO:0009082,GO:0009094,GO:0009095,GO:0009098,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019292,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0033585,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050048,GO:0050662,GO:0070279,GO:0070547,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 2.6.1.1,2.6.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 391.0
BYD3_k127_5210089_4 von Willebrand factor (vWF) type A domain K07114,K12511 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 326.0
BYD3_k127_5210089_5 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 329.0
BYD3_k127_5210089_6 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001072 272.0
BYD3_k127_5210089_7 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000683 251.0
BYD3_k127_5210089_8 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000006165 243.0
BYD3_k127_5210089_9 Oxygen tolerance - - - 0.000000000000000000000000000000000000000000000000000000000000000002501 249.0
BYD3_k127_5248422_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 6.169e-269 850.0
BYD3_k127_5248422_1 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 591.0
BYD3_k127_5248422_2 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 503.0
BYD3_k127_5248422_3 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008495 403.0
BYD3_k127_5248422_4 - - - - 0.0000000000000000000000000000000002034 138.0
BYD3_k127_5248422_5 PFAM Transcriptional regulator PadR N-terminal-like - - - 0.0000000000000000004672 91.0
BYD3_k127_5326603_0 Surface antigen K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 582.0
BYD3_k127_5326603_1 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 434.0
BYD3_k127_5326603_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 304.0
BYD3_k127_5326603_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001087 288.0
BYD3_k127_5326603_4 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000006298 171.0
BYD3_k127_5326603_5 Belongs to the skp family K06142 - - 0.00000001337 64.0
BYD3_k127_5346445_0 ATPase associated with various cellular K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005167 455.0
BYD3_k127_5346445_1 TIGRFAM N-carbamoylputrescine amidase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007555 418.0
BYD3_k127_5346445_2 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 382.0
BYD3_k127_5346445_3 Protein of unknown function DUF58 - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 362.0
BYD3_k127_5346445_4 Flavin-binding monooxygenase-like K07222 - - 0.00000000000000000000000000000000000000001738 163.0
BYD3_k127_5346445_5 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000001206 149.0
BYD3_k127_5346445_6 - - - - 0.00000000000000000002239 104.0
BYD3_k127_5346445_7 PFAM glycoside hydrolase family 13 domain protein - - - 0.000000000000000000757 93.0
BYD3_k127_5346445_8 - - - - 0.0000002434 62.0
BYD3_k127_5346445_9 - - - - 0.0000002772 62.0
BYD3_k127_5361508_0 xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 9.291e-217 698.0
BYD3_k127_5361508_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 482.0
BYD3_k127_5361508_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000002579 135.0
BYD3_k127_5361508_11 - - - - 0.000000000000000000000000000001806 127.0
BYD3_k127_5361508_12 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000006269 127.0
BYD3_k127_5361508_13 HAD-superfamily subfamily IB hydrolase, TIGR01490 - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000006683 124.0
BYD3_k127_5361508_14 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000005335 99.0
BYD3_k127_5361508_15 - - - - 0.00000000001338 68.0
BYD3_k127_5361508_16 Protein of unknown function (DUF3187) - - - 0.0000004265 61.0
BYD3_k127_5361508_17 Psort location CytoplasmicMembrane, score - - - 0.0009671 50.0
BYD3_k127_5361508_2 PFAM Molybdopterin dehydrogenase, FAD-binding K11178 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 404.0
BYD3_k127_5361508_3 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 404.0
BYD3_k127_5361508_4 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001588 284.0
BYD3_k127_5361508_5 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006424 264.0
BYD3_k127_5361508_6 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000001544 253.0
BYD3_k127_5361508_7 2Fe-2S -binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000075 238.0
BYD3_k127_5361508_8 formate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000003525 220.0
BYD3_k127_5361508_9 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000000001855 160.0
BYD3_k127_5369419_1 xylan catabolic process K03932 - - 0.0000000000000000000000000000000000000000001244 173.0
BYD3_k127_5369419_2 - - - - 0.00000000000000000000000000000002206 134.0
BYD3_k127_5369419_3 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.000000000005501 69.0
BYD3_k127_5369419_4 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000002807 51.0
BYD3_k127_5390586_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 1.148e-263 833.0
BYD3_k127_5390586_1 Proton-conducting membrane transporter - - - 6.631e-262 823.0
BYD3_k127_5390586_10 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000353 354.0
BYD3_k127_5390586_11 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007687 332.0
BYD3_k127_5390586_12 COG4237 Hydrogenase 4 membrane component (E) K12140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000969 315.0
BYD3_k127_5390586_13 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 313.0
BYD3_k127_5390586_14 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003012 265.0
BYD3_k127_5390586_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001805 258.0
BYD3_k127_5390586_16 Glycosyl transferase family 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000003523 246.0
BYD3_k127_5390586_17 Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000009073 199.0
BYD3_k127_5390586_18 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 GO:0005575,GO:0005576 1.3.3.11 0.0000000000000000000000000000000000000000000001265 181.0
BYD3_k127_5390586_19 PFAM NAD dependent epimerase dehydratase family - - - 0.00000000000000000000000000000000000000002022 168.0
BYD3_k127_5390586_2 Proton-conducting membrane transporter K12141 - - 4.209e-221 699.0
BYD3_k127_5390586_20 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000006088 115.0
BYD3_k127_5390586_21 Exostosin family - - - 0.00000000000000000000000664 118.0
BYD3_k127_5390586_22 Dehydrogenase K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 0.000000000267 62.0
BYD3_k127_5390586_23 Double zinc ribbon - - - 0.00001703 56.0
BYD3_k127_5390586_3 NADH-ubiquinone oxidoreductase chain 49kDa - - - 5.841e-206 676.0
BYD3_k127_5390586_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 507.0
BYD3_k127_5390586_5 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 406.0
BYD3_k127_5390586_6 Pyruvate dehydrogenase K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 412.0
BYD3_k127_5390586_7 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 411.0
BYD3_k127_5390586_8 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 374.0
BYD3_k127_5390586_9 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 366.0
BYD3_k127_5396063_0 Glutamine synthetase type III K01915 - 6.3.1.2 0.0 1167.0
BYD3_k127_5396063_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.174e-266 837.0
BYD3_k127_5396063_10 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 420.0
BYD3_k127_5396063_11 Cys/Met metabolism PLP-dependent enzyme K01758 - 4.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005944 411.0
BYD3_k127_5396063_12 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 344.0
BYD3_k127_5396063_13 arylformamidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 319.0
BYD3_k127_5396063_14 Bacterial regulatory helix-turn-helix protein, lysR family K03576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002757 276.0
BYD3_k127_5396063_15 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009512 277.0
BYD3_k127_5396063_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001969 263.0
BYD3_k127_5396063_17 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000002907 251.0
BYD3_k127_5396063_18 extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000007593 236.0
BYD3_k127_5396063_19 Metallophosphoesterase, calcineurin superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000208 223.0
BYD3_k127_5396063_2 MacB-like periplasmic core domain - - - 1.48e-250 798.0
BYD3_k127_5396063_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000004229 221.0
BYD3_k127_5396063_21 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000002648 221.0
BYD3_k127_5396063_22 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000009084 209.0
BYD3_k127_5396063_23 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000003272 195.0
BYD3_k127_5396063_24 Uncharacterized protein conserved in bacteria (DUF2239) K09965 - - 0.0000000000000000000000000000000000000000000002232 176.0
BYD3_k127_5396063_25 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000001067 179.0
BYD3_k127_5396063_26 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000001576 159.0
BYD3_k127_5396063_27 amine dehydrogenase activity - - - 0.000000000000000000000000000000000002327 155.0
BYD3_k127_5396063_28 Phosphotriesterase family K07048 - - 0.00000000000000000000000000000000002414 152.0
BYD3_k127_5396063_29 - - - - 0.000000000000000000000000000002377 128.0
BYD3_k127_5396063_3 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 603.0
BYD3_k127_5396063_30 Phosphatidylethanolamine-binding protein - - - 0.0000000000000000000000000001117 134.0
BYD3_k127_5396063_31 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000256 115.0
BYD3_k127_5396063_32 Transcriptional regulator K07979 - - 0.000000000000000000001088 99.0
BYD3_k127_5396063_33 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.00000000000000005771 91.0
BYD3_k127_5396063_34 Transglycosylase SLT domain - - - 0.0000000000000044 84.0
BYD3_k127_5396063_35 - - - - 0.000000000000171 78.0
BYD3_k127_5396063_36 Trap-type c4-dicarboxylate transport system, small permease component K11689,K21394 - - 0.000000000003263 75.0
BYD3_k127_5396063_37 Peptidase family M28 - - - 0.000000000005971 79.0
BYD3_k127_5396063_38 efflux transmembrane transporter activity - - - 0.000003624 59.0
BYD3_k127_5396063_4 Sodium:sulfate symporter transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006744 575.0
BYD3_k127_5396063_5 MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 561.0
BYD3_k127_5396063_6 PQQ-like domain K00117 - 1.1.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 563.0
BYD3_k127_5396063_7 arsenite transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004838 524.0
BYD3_k127_5396063_8 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007219 508.0
BYD3_k127_5396063_9 PQQ-like domain K00117 - 1.1.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008086 473.0
BYD3_k127_5407931_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 488.0
BYD3_k127_5407931_1 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000002917 204.0
BYD3_k127_5407931_3 TonB dependent receptor K16087 - - 0.0000000000000000000000000000000000000000001101 182.0
BYD3_k127_5407931_4 aminopeptidase activity - - - 0.000000000000000004003 87.0
BYD3_k127_5407931_5 Modulates RecA activity K03565 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000144 88.0
BYD3_k127_5464089_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 566.0
BYD3_k127_5464089_1 ABC transporter transmembrane region K18889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 553.0
BYD3_k127_5464089_2 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 546.0
BYD3_k127_5464089_3 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 363.0
BYD3_k127_5464089_4 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 325.0
BYD3_k127_5464089_5 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001591 254.0
BYD3_k127_5464089_6 Mo-molybdopterin cofactor biosynthetic process - - - 0.0000000000000000000000002219 120.0
BYD3_k127_5464089_7 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000003312 102.0
BYD3_k127_5488948_0 PFAM CheB methylesterase - - - 9.832e-305 978.0
BYD3_k127_5488948_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 605.0
BYD3_k127_5488948_10 phosphate transport system permease K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 396.0
BYD3_k127_5488948_11 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 391.0
BYD3_k127_5488948_12 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 366.0
BYD3_k127_5488948_13 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 389.0
BYD3_k127_5488948_14 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 343.0
BYD3_k127_5488948_15 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000437 334.0
BYD3_k127_5488948_16 negative regulation of phosphate transmembrane transport K01104,K02039,K03741 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 1.20.4.1,3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000000001972 244.0
BYD3_k127_5488948_17 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000009709 248.0
BYD3_k127_5488948_18 Lytic polysaccharide mono-oxygenase, cellulose-degrading - - - 0.0000000000000000000000000000000000000000000000000000000000000000211 230.0
BYD3_k127_5488948_19 peroxiredoxin activity - - - 0.00000000000000000000000000000000000000000000000003899 202.0
BYD3_k127_5488948_2 Amidase K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006396 516.0
BYD3_k127_5488948_20 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000001855 177.0
BYD3_k127_5488948_21 - - - - 0.000000000000000000000000000000000000008512 149.0
BYD3_k127_5488948_22 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000533 122.0
BYD3_k127_5488948_24 - - - - 0.0000228 50.0
BYD3_k127_5488948_3 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 492.0
BYD3_k127_5488948_4 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005875 474.0
BYD3_k127_5488948_5 Domain of unknown function (DUF4339) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 463.0
BYD3_k127_5488948_6 PFAM Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 491.0
BYD3_k127_5488948_7 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 454.0
BYD3_k127_5488948_8 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 421.0
BYD3_k127_5488948_9 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 420.0
BYD3_k127_5506263_0 WD40-like Beta Propeller Repeat - - - 7.817e-307 974.0
BYD3_k127_5506263_1 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000008431 228.0
BYD3_k127_5506263_2 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000001177 165.0
BYD3_k127_5506263_3 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000008614 137.0
BYD3_k127_5506263_4 COGs COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.0000000000000000000000000001258 130.0
BYD3_k127_5506263_5 Two component transcriptional regulator, winged helix family K02483 - - 0.00000000000000000000003544 113.0
BYD3_k127_5549304_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1062.0
BYD3_k127_5549304_1 Carbohydrate phosphorylase K00688 - 2.4.1.1 2.072e-258 816.0
BYD3_k127_5549304_10 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 337.0
BYD3_k127_5549304_11 cytochrome P450 K00493,K21257 - 1.14.14.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 314.0
BYD3_k127_5549304_12 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 315.0
BYD3_k127_5549304_13 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 291.0
BYD3_k127_5549304_14 - - - - 0.00000000000000000000000000000000000000000000000000000002189 209.0
BYD3_k127_5549304_15 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000002838 214.0
BYD3_k127_5549304_16 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 3.5.4.33 0.00000000000000000000000000000000000000000000000007058 182.0
BYD3_k127_5549304_17 DinB superfamily - - - 0.000000000000000000000000000000000000000008844 169.0
BYD3_k127_5549304_18 - - - - 0.0000000000000000000000000000000000000000254 165.0
BYD3_k127_5549304_19 - - - - 0.0000000000000000000000000000000000002196 155.0
BYD3_k127_5549304_2 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 2.486e-256 813.0
BYD3_k127_5549304_20 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000003511 145.0
BYD3_k127_5549304_21 - - - - 0.0000000000000000000000000000001175 136.0
BYD3_k127_5549304_22 - - - - 0.000000000000000000001599 100.0
BYD3_k127_5549304_23 Glycosyl hydrolase-like 10 - - - 0.00000000000000000002947 104.0
BYD3_k127_5549304_24 - - - - 0.0000000000001032 80.0
BYD3_k127_5549304_25 PFAM blue (type 1) copper domain protein - - - 0.000000001304 67.0
BYD3_k127_5549304_26 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000004012 53.0
BYD3_k127_5549304_27 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0002215 51.0
BYD3_k127_5549304_3 1,4-alpha-glucan branching enzyme activity K00700 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0040007,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0055114,GO:0071704,GO:0071944,GO:1901576 2.4.1.18 1.556e-249 791.0
BYD3_k127_5549304_4 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 587.0
BYD3_k127_5549304_5 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007113 498.0
BYD3_k127_5549304_6 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 472.0
BYD3_k127_5549304_7 Domain of unknown function (DUF3536) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005333 473.0
BYD3_k127_5549304_8 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006352 458.0
BYD3_k127_5549304_9 transferase activity, transferring glycosyl groups K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006459 338.0
BYD3_k127_5558930_0 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 411.0
BYD3_k127_5558930_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004642 365.0
BYD3_k127_5564846_0 Amino acid adenylation domain protein - - - 0.0 1249.0
BYD3_k127_5564846_1 D-alanine [D-alanyl carrier protein] ligase activity - - - 2.808e-226 736.0
BYD3_k127_5564846_2 Belongs to the ATP-dependent AMP-binding enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 475.0
BYD3_k127_5564846_3 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000117 308.0
BYD3_k127_5564846_4 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001158 283.0
BYD3_k127_5564846_5 non-ribosomal peptide synthetase K16416 - - 0.00000000000000000000000000000000000000000008494 182.0
BYD3_k127_5564846_6 Belongs to the P-Pant transferase superfamily K06133 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008897,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0019752,GO:0019878,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000001363 145.0
BYD3_k127_5564846_7 Domain of unknown function (DUF4112) - - - 0.000000000000000000000000000000001224 137.0
BYD3_k127_5564846_8 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000598 52.0
BYD3_k127_5564846_9 Domain of unknown function (DUF4126) - - - 0.0002104 48.0
BYD3_k127_5596638_0 Dipeptidyl carboxypeptidase K01284 - 3.4.15.5 8.209e-283 887.0
BYD3_k127_5596638_1 organic phosphonate transport K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 405.0
BYD3_k127_5596638_10 MlaD protein K06192 - - 0.00000000000000000000000000000000000000006041 164.0
BYD3_k127_5596638_11 ABC-type transport auxiliary lipoprotein component K09857 - - 0.0000000000000000000000000005773 120.0
BYD3_k127_5596638_12 PFAM AIG2-like - - - 0.0000000000000000004605 98.0
BYD3_k127_5596638_13 - - - - 0.000000005857 58.0
BYD3_k127_5596638_14 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01485,K11991 GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 3.5.4.1,3.5.4.33 0.000005367 48.0
BYD3_k127_5596638_2 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 357.0
BYD3_k127_5596638_3 COGs COG0767 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 332.0
BYD3_k127_5596638_4 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006368 312.0
BYD3_k127_5596638_5 TIGRFAM phosphonate ABC transporter, inner membrane subunit K02042 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003901 276.0
BYD3_k127_5596638_6 Phosphonate ABC transporter K02042 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000926 271.0
BYD3_k127_5596638_7 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000003435 241.0
BYD3_k127_5596638_8 glycerophosphodiester phosphodiesterase activity K01126 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008081,GO:0008889,GO:0009279,GO:0016020,GO:0016787,GO:0016788,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044462,GO:0044464,GO:0046872,GO:0071944 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000002183 231.0
BYD3_k127_5596638_9 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000002086 189.0
BYD3_k127_5599211_0 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K01661 - 4.1.3.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000845 445.0
BYD3_k127_5599211_1 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 426.0
BYD3_k127_5599211_10 His Kinase A (phosphoacceptor) domain - - - 0.000001889 57.0
BYD3_k127_5599211_2 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001806 285.0
BYD3_k127_5599211_3 Isochorismate synthase K02552 - 5.4.4.2 0.000000000000000000000000000000000000000000000000000000000000003224 236.0
BYD3_k127_5599211_4 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - - 0.000000000000000000000000000000000000000000000001822 182.0
BYD3_k127_5599211_5 ArsC family - - - 0.000000000000000000000000000000000000005826 148.0
BYD3_k127_5599211_6 Protein of unknown function, DUF - - - 0.00000000000000000000000000000000003201 144.0
BYD3_k127_5599211_7 - - - - 0.000000000000005166 83.0
BYD3_k127_5599211_8 von Willebrand factor (vWF) type A domain - - - 0.0000000000003085 70.0
BYD3_k127_5599211_9 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.000000005089 63.0
BYD3_k127_5614952_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1129.0
BYD3_k127_5614952_1 Acetolactate synthase K01652 - 2.2.1.6 1.553e-250 785.0
BYD3_k127_5614952_10 Epoxide hydrolase N terminus K21159 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 423.0
BYD3_k127_5614952_11 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 394.0
BYD3_k127_5614952_12 phosphorelay signal transduction system K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 374.0
BYD3_k127_5614952_13 Domain of unknown function (DUF4388) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 353.0
BYD3_k127_5614952_14 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 325.0
BYD3_k127_5614952_15 Bacterial dnaA protein K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 331.0
BYD3_k127_5614952_16 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002288 299.0
BYD3_k127_5614952_17 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001443 280.0
BYD3_k127_5614952_18 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001193 268.0
BYD3_k127_5614952_19 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000000001486 245.0
BYD3_k127_5614952_2 lysine biosynthetic process via aminoadipic acid - - - 1.536e-215 700.0
BYD3_k127_5614952_20 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000002719 199.0
BYD3_k127_5614952_21 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000004814 173.0
BYD3_k127_5614952_22 TIGRFAM Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000005598 169.0
BYD3_k127_5614952_24 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000000000000000000000000000000000000002449 151.0
BYD3_k127_5614952_25 Carboxylesterase family - - - 0.000000000000000000000000000000000252 142.0
BYD3_k127_5614952_26 Glutathione peroxidase - - - 0.0000000000000000000000000000000004264 138.0
BYD3_k127_5614952_27 - - - - 0.00000000000000000000000000006077 133.0
BYD3_k127_5614952_28 SpoVT / AbrB like domain K07172 - - 0.0000000000000000000000006103 106.0
BYD3_k127_5614952_29 PFAM DivIVA family protein K04074 - - 0.0000000000004816 79.0
BYD3_k127_5614952_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 570.0
BYD3_k127_5614952_4 PQQ-like domain K00114,K17760 - 1.1.2.8,1.1.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 509.0
BYD3_k127_5614952_5 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01740,K10764 - 2.5.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 499.0
BYD3_k127_5614952_6 peroxiredoxin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 444.0
BYD3_k127_5614952_7 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 439.0
BYD3_k127_5614952_8 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 431.0
BYD3_k127_5614952_9 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008185 422.0
BYD3_k127_5618564_0 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 514.0
BYD3_k127_5618564_1 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006642 324.0
BYD3_k127_5618564_2 oxidoreductase activity K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000003242 245.0
BYD3_k127_5618564_3 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000831 220.0
BYD3_k127_5618564_4 - - - - 0.00000000000000000000000000000000000007116 147.0
BYD3_k127_5618564_5 AraC-like ligand binding domain - - - 0.000000000000000000000000000225 119.0
BYD3_k127_5618564_6 PFAM methyltransferase - - - 0.0000000000000000003271 100.0
BYD3_k127_5670122_0 Sulfite reductase K00366,K00381,K00392 - 1.7.7.1,1.8.1.2,1.8.7.1 1.404e-298 936.0
BYD3_k127_5670122_1 Belongs to the alpha-IPM synthase homocitrate synthase family K09011 - 2.3.1.182 9.956e-218 687.0
BYD3_k127_5670122_10 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000001949 128.0
BYD3_k127_5670122_11 Alpha beta hydrolase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000235 119.0
BYD3_k127_5670122_12 - - - - 0.000000000000000000004486 102.0
BYD3_k127_5670122_13 Cupin - - - 0.0000000000000003919 87.0
BYD3_k127_5670122_15 - - - - 0.0000000004339 66.0
BYD3_k127_5670122_16 DinB superfamily - - - 0.0000000006496 68.0
BYD3_k127_5670122_2 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006765 401.0
BYD3_k127_5670122_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 320.0
BYD3_k127_5670122_4 precorrin-2 dehydrogenase activity K02302,K02303,K02304,K03795,K04719,K13542 GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.13.11.79,1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.3,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002989 285.0
BYD3_k127_5670122_5 Belongs to the PAPS reductase family. CysH subfamily K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000003947 245.0
BYD3_k127_5670122_6 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000004712 244.0
BYD3_k127_5670122_7 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000001813 189.0
BYD3_k127_5670122_8 Domain of unknown function (DUF4202) - - - 0.0000000000000000000000000000000000000000002577 165.0
BYD3_k127_5670122_9 - - - - 0.000000000000000000000000000000000000006926 151.0
BYD3_k127_5726200_0 GXGXG motif K00265 - 1.4.1.13,1.4.1.14 0.0 1533.0
BYD3_k127_5726200_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.853e-247 780.0
BYD3_k127_5726200_10 protein histidine kinase activity - - - 0.0001815 51.0
BYD3_k127_5726200_2 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001451 282.0
BYD3_k127_5726200_3 TPM domain K06872 - - 0.000000000000000000000000000000000000000000000000000000000000000006699 237.0
BYD3_k127_5726200_4 HAD-hyrolase-like - - - 0.00000000000000000000000000000000000000000000000000000001981 205.0
BYD3_k127_5726200_5 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000007467 198.0
BYD3_k127_5726200_6 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000001468 206.0
BYD3_k127_5726200_7 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000001386 196.0
BYD3_k127_5726200_8 TPM domain K08988 - - 0.00000000000000000000000000000000000002853 157.0
BYD3_k127_5726200_9 - - - - 0.0000000000000000000000000247 117.0
BYD3_k127_5780855_0 Domain of unknown function (DUF5117) - - - 3.623e-296 934.0
BYD3_k127_5780855_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 444.0
BYD3_k127_5780855_10 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000001167 102.0
BYD3_k127_5780855_2 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 358.0
BYD3_k127_5780855_3 Peptidase family M23 K21472 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 344.0
BYD3_k127_5780855_4 Protein of unknown function (DUF512) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 358.0
BYD3_k127_5780855_5 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 295.0
BYD3_k127_5780855_6 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000002688 262.0
BYD3_k127_5780855_7 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000001034 164.0
BYD3_k127_5780855_8 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000002093 140.0
BYD3_k127_5780855_9 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000004 131.0
BYD3_k127_5860024_0 Putative glutamine amidotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008299 597.0
BYD3_k127_5860024_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 530.0
BYD3_k127_5860024_10 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000001469 166.0
BYD3_k127_5860024_11 Calcium/calmodulin dependent protein kinase II association domain - - - 0.000000000000000000000000000000006113 136.0
BYD3_k127_5860024_12 response to heat - - - 0.000000000000000000000000000000007278 136.0
BYD3_k127_5860024_13 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.0000000000000000000002563 98.0
BYD3_k127_5860024_14 Cupin domain - - - 0.0000000000000007524 83.0
BYD3_k127_5860024_15 Copper resistance protein D K07245 - - 0.00000002788 62.0
BYD3_k127_5860024_16 BON domain - - - 0.00000006015 63.0
BYD3_k127_5860024_17 Peptidoglycan-binding domain 1 protein - - - 0.0000002583 58.0
BYD3_k127_5860024_2 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004794 314.0
BYD3_k127_5860024_3 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002021 287.0
BYD3_k127_5860024_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000001615 252.0
BYD3_k127_5860024_5 cellular modified histidine biosynthetic process K18802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001077 248.0
BYD3_k127_5860024_6 PFAM Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.0000000000000000000000000000000000000000000000000000000000000000006384 233.0
BYD3_k127_5860024_7 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000006593 234.0
BYD3_k127_5860024_8 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000001171 195.0
BYD3_k127_5860024_9 Peptidase C14 caspase catalytic subunit p20 - - - 0.0000000000000000000000000000000000000000001061 176.0
BYD3_k127_5917697_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 2.144e-209 679.0
BYD3_k127_5917697_1 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009329 512.0
BYD3_k127_5917697_2 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004021 318.0
BYD3_k127_5917697_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000001244 212.0
BYD3_k127_5917697_4 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000668 121.0
BYD3_k127_5917697_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000001343 110.0
BYD3_k127_5917697_6 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.000000000000000000006122 93.0
BYD3_k127_5917697_7 Protein of unknown function (DUF503) K09764 - - 0.00000000000000001245 85.0
BYD3_k127_5917697_8 ribosomal protein - - - 0.00000001015 64.0
BYD3_k127_5976296_0 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 528.0
BYD3_k127_5976296_1 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009644 330.0
BYD3_k127_5976296_10 PadR family transcriptional regulator - - - 0.0000000002565 67.0
BYD3_k127_5976296_12 Peptidase family S41 - - - 0.00008328 46.0
BYD3_k127_5976296_2 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 306.0
BYD3_k127_5976296_3 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 312.0
BYD3_k127_5976296_4 Trehalose utilisation K09992 - - 0.00000000000000000000000000000000000003997 158.0
BYD3_k127_5976296_5 Belongs to the peptidase S41A family - - - 0.0000000000000000000000000000000000001278 146.0
BYD3_k127_5976296_6 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.000000000000000000000000000009934 124.0
BYD3_k127_5976296_7 SnoaL-like domain - - - 0.0000000000000000000518 94.0
BYD3_k127_5976296_8 ASCH - - - 0.0000000000009922 68.0
BYD3_k127_5976296_9 - - - - 0.00000000004451 64.0
BYD3_k127_6051447_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 546.0
BYD3_k127_6051447_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 GO:0003674,GO:0003824,GO:0004333,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0030312,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0055114,GO:0071704,GO:0071944,GO:0072350 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 527.0
BYD3_k127_6051447_2 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 416.0
BYD3_k127_6051447_3 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000719 325.0
BYD3_k127_6051447_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000003988 216.0
BYD3_k127_6051447_5 PFAM short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.000000000000000000000000000000000000000000000000001851 191.0
BYD3_k127_6051447_6 permease - - - 0.00000000000000000000000000000000000000000000000008565 193.0
BYD3_k127_6051447_7 Haem-degrading - - - 0.00000000000000004417 88.0
BYD3_k127_6051447_8 TIGRFAM MoaD family protein K03636 - - 0.000000000000000472 81.0
BYD3_k127_6108136_0 5TM C-terminal transporter carbon starvation CstA K06200 - - 6.422e-291 908.0
BYD3_k127_6108136_1 C-terminus of AA_permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006869 550.0
BYD3_k127_6108136_10 Putative adhesin - - - 0.0000000007539 64.0
BYD3_k127_6108136_11 COG0642 Signal transduction histidine kinase - - - 0.00001259 51.0
BYD3_k127_6108136_2 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008419 545.0
BYD3_k127_6108136_3 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007586 396.0
BYD3_k127_6108136_4 Psort location CytoplasmicMembrane, score 10.00 K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002556 248.0
BYD3_k127_6108136_5 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000005478 234.0
BYD3_k127_6108136_6 Zinc carboxypeptidase K01278 - 3.4.14.5 0.000000000000000000000000000000000000000000000000002277 203.0
BYD3_k127_6108136_7 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000005446 163.0
BYD3_k127_6108136_8 Regulator of nitric oxide reductase transcription K19339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000002253 158.0
BYD3_k127_6108136_9 - - - - 0.0000000000000118 83.0
BYD3_k127_6122219_0 Telomere recombination K04656 - - 2.009e-201 661.0
BYD3_k127_6122219_1 hydrogenase expression formation protein HypD K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 523.0
BYD3_k127_6122219_2 hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 393.0
BYD3_k127_6122219_3 AAA ATPase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008534 378.0
BYD3_k127_6122219_4 TIGRFAM Hydrogenase accessory protein HypB K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000004196 233.0
BYD3_k127_6122219_5 Alpha beta hydrolase - - - 0.0000000000000000000000001576 124.0
BYD3_k127_6122219_6 Hydrogenase expression formation protein K04653 - - 0.00000000000000000000001825 102.0
BYD3_k127_6190340_0 PFAM Glycosyl transferase, group 1 - - - 6.003e-279 878.0
BYD3_k127_6190340_1 TonB-dependent Receptor Plug Domain K02014 - - 6.575e-211 677.0
BYD3_k127_6190340_10 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000002561 114.0
BYD3_k127_6190340_11 helix_turn_helix, Arsenical Resistance Operon Repressor K21903 - - 0.0000000000000000000005522 101.0
BYD3_k127_6190340_2 alginic acid biosynthetic process K01729 - 4.2.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 549.0
BYD3_k127_6190340_3 beta-1,4-mannooligosaccharide phosphorylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008111 483.0
BYD3_k127_6190340_4 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 357.0
BYD3_k127_6190340_5 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 359.0
BYD3_k127_6190340_6 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000144 229.0
BYD3_k127_6190340_7 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000003116 202.0
BYD3_k127_6190340_8 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000003561 177.0
BYD3_k127_6190340_9 - - - - 0.000000000000000000000000000000004927 138.0
BYD3_k127_6191013_0 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 1.319e-248 798.0
BYD3_k127_6191013_1 D-aminoacylase domain protein K01465,K06015 - 3.5.1.81,3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 617.0
BYD3_k127_6191013_10 - - - - 0.0000000000000000000000000155 123.0
BYD3_k127_6191013_11 AI-2E family transporter - - - 0.000000000001504 68.0
BYD3_k127_6191013_12 MacB-like periplasmic core domain - - - 0.00001934 53.0
BYD3_k127_6191013_13 amine dehydrogenase activity - - - 0.0002536 51.0
BYD3_k127_6191013_2 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 444.0
BYD3_k127_6191013_3 N-acetylglucosaminylinositol deacetylase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 293.0
BYD3_k127_6191013_4 Alpha/beta hydrolase family K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003033 279.0
BYD3_k127_6191013_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000003016 244.0
BYD3_k127_6191013_6 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000007926 156.0
BYD3_k127_6191013_7 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000001395 147.0
BYD3_k127_6191013_8 - - - - 0.000000000000000000000000000000000005379 148.0
BYD3_k127_6191013_9 protein kinase activity - - - 0.0000000000000000000000000001182 122.0
BYD3_k127_6223752_0 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 345.0
BYD3_k127_6223752_1 peroxiredoxin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001479 285.0
BYD3_k127_6223752_3 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000002371 183.0
BYD3_k127_6223752_5 SusD family K21572 - - 0.00000000000000000000000000008433 132.0
BYD3_k127_6230664_0 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006143 386.0
BYD3_k127_6230664_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 348.0
BYD3_k127_6230664_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000848 279.0
BYD3_k127_6230664_3 flavoprotein involved in K transport K11816 - 1.14.13.168 0.000000000000000000000000000000000000000000001924 177.0
BYD3_k127_6230664_4 - - - - 0.0000000000001511 74.0
BYD3_k127_6230664_5 TonB dependent receptor - - - 0.000000001705 70.0
BYD3_k127_6374616_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004155 282.0
BYD3_k127_6374616_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002561 259.0
BYD3_k127_6374616_2 - - - - 0.00000000002686 72.0
BYD3_k127_6494309_0 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.0 1562.0
BYD3_k127_6494309_1 Histidine kinase A domain protein - - - 5.566e-281 869.0
BYD3_k127_6494309_2 Protein of unknown function DUF86 - - - 0.000000000000000000000000000000000000002838 149.0
BYD3_k127_6494309_3 PFAM DNA polymerase, beta domain protein region K07075 - - 0.000000000000000000000153 100.0
BYD3_k127_6505600_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 1.519e-285 905.0
BYD3_k127_6505600_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 530.0
BYD3_k127_6505600_10 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000002081 198.0
BYD3_k127_6505600_11 beta-lactamase domain protein K02238 - - 0.0000000000000000000000000000000000000000000000000001279 201.0
BYD3_k127_6505600_12 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000003926 101.0
BYD3_k127_6505600_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006623 484.0
BYD3_k127_6505600_3 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 405.0
BYD3_k127_6505600_4 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 356.0
BYD3_k127_6505600_5 Trypsin K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006009 350.0
BYD3_k127_6505600_6 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008075 313.0
BYD3_k127_6505600_7 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006363 287.0
BYD3_k127_6505600_8 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000001339 247.0
BYD3_k127_6505600_9 - - - - 0.0000000000000000000000000000000000000000000000000000008452 199.0
BYD3_k127_6520229_0 L-Lactate permease K03303 - - 2.885e-293 909.0
BYD3_k127_6520229_1 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 1.158e-272 856.0
BYD3_k127_6520229_10 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 527.0
BYD3_k127_6520229_11 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009271 522.0
BYD3_k127_6520229_12 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 475.0
BYD3_k127_6520229_13 secondary active sulfate transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006096 486.0
BYD3_k127_6520229_14 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 446.0
BYD3_k127_6520229_15 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003236 454.0
BYD3_k127_6520229_16 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 424.0
BYD3_k127_6520229_17 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 400.0
BYD3_k127_6520229_18 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004688 385.0
BYD3_k127_6520229_19 Aconitase C-terminal domain K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000001018 241.0
BYD3_k127_6520229_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 3.202e-228 732.0
BYD3_k127_6520229_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002202 229.0
BYD3_k127_6520229_21 PFAM ATP-binding region ATPase domain protein K07678 - 2.7.13.3 0.00000000000000000000000000000000000000000000000001017 191.0
BYD3_k127_6520229_22 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000719 202.0
BYD3_k127_6520229_23 Prephenate dehydratase K04518,K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000002287 188.0
BYD3_k127_6520229_24 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000000000000000002106 167.0
BYD3_k127_6520229_25 4TM region of pyridine nucleotide transhydrogenase, mitoch - - - 0.000000000000000000000000000004574 123.0
BYD3_k127_6520229_26 Protein of unknown function, DUF485 - - - 0.0000000000000000000000000008781 115.0
BYD3_k127_6520229_27 Leucine-rich repeat K13730 - - 0.00000000000000000000001613 117.0
BYD3_k127_6520229_28 Tetratricopeptide repeat - - - 0.00000000000000006718 95.0
BYD3_k127_6520229_29 PBS lyase HEAT-like repeat - - - 0.000000000000001004 91.0
BYD3_k127_6520229_3 potassium ion transmembrane transporter activity K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 6.042e-225 714.0
BYD3_k127_6520229_4 Belongs to the enoyl-CoA hydratase isomerase family K07516 - 1.1.1.35 3.261e-217 696.0
BYD3_k127_6520229_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 5.677e-214 673.0
BYD3_k127_6520229_6 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 9.099e-208 667.0
BYD3_k127_6520229_7 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006834 591.0
BYD3_k127_6520229_8 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 545.0
BYD3_k127_6520229_9 Major facilitator superfamily K08167 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006259 534.0
BYD3_k127_6525734_0 copper-translocating P-type ATPase K01533 - 3.6.3.4 1.772e-281 889.0
BYD3_k127_6525734_1 Putative modulator of DNA gyrase K03568 - - 1.007e-206 655.0
BYD3_k127_6525734_10 ABC-type multidrug transport system ATPase and permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 430.0
BYD3_k127_6525734_11 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 397.0
BYD3_k127_6525734_12 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000532 388.0
BYD3_k127_6525734_13 Multicopper oxidase K04753,K08100 - 1.3.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008131 364.0
BYD3_k127_6525734_14 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003509 370.0
BYD3_k127_6525734_15 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 353.0
BYD3_k127_6525734_16 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 342.0
BYD3_k127_6525734_17 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 345.0
BYD3_k127_6525734_18 GTP cyclohydrolase II K01497 - 3.5.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 341.0
BYD3_k127_6525734_19 ABC transporter K02003,K05685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007042 334.0
BYD3_k127_6525734_2 FtsX-like permease family K02004 - - 6.547e-205 662.0
BYD3_k127_6525734_20 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008595 302.0
BYD3_k127_6525734_21 ZIP Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 299.0
BYD3_k127_6525734_22 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009594 298.0
BYD3_k127_6525734_23 PFAM Alcohol dehydrogenase, zinc-binding K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003952 289.0
BYD3_k127_6525734_24 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000244 278.0
BYD3_k127_6525734_25 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000001306 273.0
BYD3_k127_6525734_28 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000004215 250.0
BYD3_k127_6525734_29 Belongs to the LTA synthase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003137 262.0
BYD3_k127_6525734_3 PFAM Glycosyl transferase family 2 - - - 6.75e-203 663.0
BYD3_k127_6525734_30 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004767 266.0
BYD3_k127_6525734_31 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001031 242.0
BYD3_k127_6525734_32 RibD C-terminal domain K00082,K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000002586 258.0
BYD3_k127_6525734_33 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000004415 249.0
BYD3_k127_6525734_34 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004022 252.0
BYD3_k127_6525734_35 6-pyruvoyl tetrahydropterin synthase - - - 0.0000000000000000000000000000000000000000000000000000000000006191 215.0
BYD3_k127_6525734_36 Cytochrome c K00376,K02305,K17760 - 1.1.9.1,1.7.2.4 0.00000000000000000000000000000000000000000000000000002567 197.0
BYD3_k127_6525734_37 cyclopropane-fatty-acyl-phospholipid synthase K18897,K20444 - 2.1.1.157 0.000000000000000000000000000000000000000000000000004977 194.0
BYD3_k127_6525734_38 CDP-alcohol phosphatidyltransferase - - - 0.000000000000000000000000000000000000000000000000009776 191.0
BYD3_k127_6525734_39 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000001015 185.0
BYD3_k127_6525734_4 Multicopper oxidase K00368,K22348 - 1.16.3.3,1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000871 608.0
BYD3_k127_6525734_40 succinate dehydrogenase - - - 0.00000000000000000000000000000000000000000000884 173.0
BYD3_k127_6525734_41 D-alanyl-D-alanine carboxypeptidase - - - 0.000000000000000000000000000000000000000003296 166.0
BYD3_k127_6525734_42 Metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000001497 163.0
BYD3_k127_6525734_43 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000000000002799 136.0
BYD3_k127_6525734_44 3-demethylubiquinone-9 3-O-methyltransferase activity K15257 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 - 0.00000000000000000000000000000091 134.0
BYD3_k127_6525734_45 methyltransferase - - - 0.00000000000000000000000000001218 131.0
BYD3_k127_6525734_46 Methyltransferase domain - - - 0.00000000000000000000000000003651 132.0
BYD3_k127_6525734_47 Transcriptional regulator K13771 - - 0.00000000000000000000000000007393 121.0
BYD3_k127_6525734_48 PFAM globin K06886 - - 0.000000000000000000000000003423 119.0
BYD3_k127_6525734_49 N-acetylglucosaminylinositol deacetylase activity K22135 - - 0.000000000000000000000002663 113.0
BYD3_k127_6525734_5 peroxiredoxin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 530.0
BYD3_k127_6525734_50 - - - - 0.000000000000000000000004758 114.0
BYD3_k127_6525734_51 - - - - 0.0000000000000001724 83.0
BYD3_k127_6525734_52 - - - - 0.00000000000001322 83.0
BYD3_k127_6525734_53 Transcriptional regulatory protein, C terminal - - - 0.0000000000003183 79.0
BYD3_k127_6525734_54 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.000000803 60.0
BYD3_k127_6525734_55 TonB-dependent receptor - - - 0.000002045 57.0
BYD3_k127_6525734_56 CDP-alcohol phosphatidyltransferase K00995,K08744 - 2.7.8.41,2.7.8.5 0.00001965 55.0
BYD3_k127_6525734_57 domain, Protein K01183 - 3.2.1.14 0.00005417 53.0
BYD3_k127_6525734_58 Tellurite resistance protein TerB - - - 0.0001579 50.0
BYD3_k127_6525734_59 ABC1 family - - - 0.0002902 47.0
BYD3_k127_6525734_6 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 518.0
BYD3_k127_6525734_7 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 501.0
BYD3_k127_6525734_8 TrkA-N domain K03316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 498.0
BYD3_k127_6525734_9 Putative modulator of DNA gyrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 483.0
BYD3_k127_6557924_0 tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003898 576.0
BYD3_k127_6557924_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 559.0
BYD3_k127_6557924_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002614 293.0
BYD3_k127_6557924_3 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004298 263.0
BYD3_k127_6557924_4 MazG nucleotide pyrophosphohydrolase domain K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000004209 234.0
BYD3_k127_6557924_5 PFAM Peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000677 238.0
BYD3_k127_6557924_6 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000000000001714 162.0
BYD3_k127_6557924_7 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000003827 66.0
BYD3_k127_6592474_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1224.0
BYD3_k127_6592474_1 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 1.215e-253 794.0
BYD3_k127_6592474_10 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000001808 265.0
BYD3_k127_6592474_11 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001597 241.0
BYD3_k127_6592474_12 PFAM Cytochrome C - - - 0.000000000000000000000000000000000000000000000000000000002988 216.0
BYD3_k127_6592474_13 Alpha/beta hydrolase family K06889 - - 0.000000000000000000000000000000000000000000000000003379 196.0
BYD3_k127_6592474_14 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000000000000000000000008619 184.0
BYD3_k127_6592474_15 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000008314 129.0
BYD3_k127_6592474_17 - - - - 0.000000000000000000006385 96.0
BYD3_k127_6592474_18 ioli protein K06606 - 5.3.99.11 0.00000000000000000299 96.0
BYD3_k127_6592474_19 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.000000000000000003588 85.0
BYD3_k127_6592474_2 TIGRFAM PQQ-dependent dehydrogenase, methanol ethanol family K17760 - 1.1.9.1 1.233e-246 785.0
BYD3_k127_6592474_20 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000006193 77.0
BYD3_k127_6592474_21 - - - - 0.000000000001243 78.0
BYD3_k127_6592474_23 - - - - 0.00001056 57.0
BYD3_k127_6592474_24 protein involved in outer membrane biogenesis K07290 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0032386,GO:0032879,GO:0032880,GO:0033157,GO:0044464,GO:0050789,GO:0051049,GO:0051223,GO:0060341,GO:0065007,GO:0070201,GO:0071944,GO:0090087,GO:0090313,GO:1903533,GO:1903827,GO:1905475 - 0.0001722 53.0
BYD3_k127_6592474_3 glutamine synthetase K01915 - 6.3.1.2 3.204e-220 691.0
BYD3_k127_6592474_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 7.167e-207 660.0
BYD3_k127_6592474_5 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004449 477.0
BYD3_k127_6592474_6 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 476.0
BYD3_k127_6592474_7 PFAM Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007203 424.0
BYD3_k127_6592474_8 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006589 407.0
BYD3_k127_6592474_9 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005804 286.0
BYD3_k127_6612005_0 Methylmalonyl-CoA mutase K01848,K11942 - 5.4.99.13,5.4.99.2 1.686e-231 734.0
BYD3_k127_6612005_1 Carboxyl transferase domain - - - 2.753e-225 713.0
BYD3_k127_6612005_10 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000368 368.0
BYD3_k127_6612005_11 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 359.0
BYD3_k127_6612005_12 ArgK protein K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008805 349.0
BYD3_k127_6612005_13 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 333.0
BYD3_k127_6612005_14 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 306.0
BYD3_k127_6612005_15 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000007734 265.0
BYD3_k127_6612005_16 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000002674 260.0
BYD3_k127_6612005_17 HEAT repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001066 264.0
BYD3_k127_6612005_18 phospholipase Carboxylesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000385 256.0
BYD3_k127_6612005_19 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000004445 230.0
BYD3_k127_6612005_2 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 1.294e-196 630.0
BYD3_k127_6612005_20 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000001001 209.0
BYD3_k127_6612005_21 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000001069 221.0
BYD3_k127_6612005_22 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000004559 201.0
BYD3_k127_6612005_23 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000007586 205.0
BYD3_k127_6612005_24 RNA-binding protein homologous to eukaryotic snRNP - - - 0.0000000000000000000000000000000000000003387 168.0
BYD3_k127_6612005_25 - - - - 0.000000000000000000000000000000000006708 150.0
BYD3_k127_6612005_26 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000002918 124.0
BYD3_k127_6612005_27 HD superfamily hydrolase involved in NAD metabolism K00950 - 2.7.6.3 0.000000000000000000008984 100.0
BYD3_k127_6612005_28 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000001045 98.0
BYD3_k127_6612005_29 LytR cell envelope-related transcriptional attenuator - - - 0.00000000000004354 81.0
BYD3_k127_6612005_3 Acyclic terpene utilisation family protein AtuA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 586.0
BYD3_k127_6612005_30 VanZ like family - - - 0.000000000003055 72.0
BYD3_k127_6612005_31 Ribonuclease E/G family K08301 - - 0.000008413 53.0
BYD3_k127_6612005_4 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 526.0
BYD3_k127_6612005_5 Acyl-CoA dehydrogenase, C-terminal domain K18244 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009407 511.0
BYD3_k127_6612005_6 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007646 506.0
BYD3_k127_6612005_7 7TM receptor with intracellular HD hydrolase K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 452.0
BYD3_k127_6612005_8 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005511 401.0
BYD3_k127_6612005_9 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 383.0
BYD3_k127_671109_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 443.0
BYD3_k127_671109_1 NUDIX domain - - - 0.00000000000000000000000000002257 122.0
BYD3_k127_677393_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0034220,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044464,GO:0044769,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132,GO:1902600 3.6.3.14,3.6.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003962 571.0
BYD3_k127_677393_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 515.0
BYD3_k127_677393_10 Produces ATP from ADP in the presence of a proton gradient across the membrane K02122 - - 0.000000004597 68.0
BYD3_k127_677393_11 Produces ATP from ADP in the presence of a proton gradient across the membrane K02119 - - 0.0002452 53.0
BYD3_k127_677393_2 small subunit K06282 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 446.0
BYD3_k127_677393_3 PFAM V-type ATPase 116 kDa K02123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005838 329.0
BYD3_k127_677393_4 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000006066 236.0
BYD3_k127_677393_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.00000000000000006796 96.0
BYD3_k127_677393_6 8 heme-binding sites - - - 0.0000000000000001092 93.0
BYD3_k127_677393_7 PFAM H transporting two-sector ATPase C subunit K02124 - - 0.0000000000000005848 82.0
BYD3_k127_677393_8 denitrification pathway - - - 0.000000000001837 77.0
BYD3_k127_677393_9 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.000000000002998 79.0
BYD3_k127_6854863_0 PQQ-like domain - - - 1.369e-223 719.0
BYD3_k127_6854863_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 619.0
BYD3_k127_6854863_10 O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002118 273.0
BYD3_k127_6854863_11 cytochrome K17230 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004677 273.0
BYD3_k127_6854863_13 thiosulfate sulfurtransferase activity K01011,K01613 - 2.8.1.1,2.8.1.2,4.1.1.65 0.000000000000000000000000000000000000000000000000001326 196.0
BYD3_k127_6854863_14 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000004566 177.0
BYD3_k127_6854863_15 - - - - 0.000000000000000000000000000109 127.0
BYD3_k127_6854863_16 Dodecin K09165 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000004082 104.0
BYD3_k127_6854863_2 PFAM FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007137 538.0
BYD3_k127_6854863_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006492 516.0
BYD3_k127_6854863_4 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 499.0
BYD3_k127_6854863_5 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 432.0
BYD3_k127_6854863_6 PFAM CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005923 368.0
BYD3_k127_6854863_7 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 343.0
BYD3_k127_6854863_8 Dicarboxylate carrier MatC domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 326.0
BYD3_k127_6854863_9 Surface antigen K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 320.0
BYD3_k127_688435_0 Iron-containing alcohol dehydrogenase K11173 - 1.1.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 541.0
BYD3_k127_688435_1 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000001742 256.0
BYD3_k127_688435_2 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000008858 221.0
BYD3_k127_688435_3 - - - - 0.00000000000000000000000006294 121.0
BYD3_k127_688435_4 translation initiation inhibitor, yjgF family - - - 0.00000000000000004208 89.0
BYD3_k127_688435_5 Outer membrane protein beta-barrel domain - - - 0.00000745 54.0
BYD3_k127_688435_6 Tetratricopeptide repeat - - - 0.0000405 53.0
BYD3_k127_7085111_0 hydrolase family 65, central catalytic K01194,K01838,K04844,K05342 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0016787,GO:0030312,GO:0044464,GO:0071944 2.4.1.64,3.2.1.28,5.4.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 543.0
BYD3_k127_7085111_1 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000008426 272.0
BYD3_k127_7085111_2 AMP binding - - - 0.0000001577 63.0
BYD3_k127_7085111_3 membrane protein (DUF2078) K08982 - - 0.0000001599 55.0
BYD3_k127_7085111_4 Rieske [2Fe-2S] domain K00411,K02636,K03886 - 1.10.2.2,1.10.9.1 0.00003713 54.0
BYD3_k127_7160765_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 5.963e-267 837.0
BYD3_k127_7160765_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 4.678e-210 666.0
BYD3_k127_7160765_10 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 393.0
BYD3_k127_7160765_11 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009808 340.0
BYD3_k127_7160765_12 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000313 304.0
BYD3_k127_7160765_13 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000002239 234.0
BYD3_k127_7160765_14 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000001069 179.0
BYD3_k127_7160765_15 - - - - 0.0000000000000000000000000000000000000000000000005197 191.0
BYD3_k127_7160765_16 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000004706 177.0
BYD3_k127_7160765_17 rod shape-determining protein MreC K03570 - - 0.000000000000000000000000000000000006697 148.0
BYD3_k127_7160765_18 rod shape-determining protein MreD K03571 - - 0.0000001794 61.0
BYD3_k127_7160765_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 597.0
BYD3_k127_7160765_3 chaperone-mediated protein folding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 592.0
BYD3_k127_7160765_4 Hsp70 protein K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 528.0
BYD3_k127_7160765_5 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008174 513.0
BYD3_k127_7160765_6 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 456.0
BYD3_k127_7160765_7 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 414.0
BYD3_k127_7160765_8 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004385 404.0
BYD3_k127_7160765_9 Cell cycle protein K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 394.0
BYD3_k127_7170991_0 nonribosomal peptide K00666,K01897,K18660,K18661 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 577.0
BYD3_k127_7170991_1 ATP-dependent helicase nuclease subunit A K16898 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009807 552.0
BYD3_k127_7170991_10 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009012 346.0
BYD3_k127_7170991_11 protein histidine kinase activity K03407,K07678 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 310.0
BYD3_k127_7170991_12 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 311.0
BYD3_k127_7170991_13 PFAM sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005231 291.0
BYD3_k127_7170991_14 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000007964 279.0
BYD3_k127_7170991_15 G-rich domain on putative tyrosine kinase K08252,K16554 - 2.7.10.1 0.000000000000000000000000000000000000000000000000000000000000000000000001524 272.0
BYD3_k127_7170991_16 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008284 254.0
BYD3_k127_7170991_17 Asparaginase, N-terminal K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000009322 241.0
BYD3_k127_7170991_18 ABC transporter, ATP-binding protein K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000002126 258.0
BYD3_k127_7170991_19 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000164 228.0
BYD3_k127_7170991_2 COG1020 Non-ribosomal peptide synthetase modules and related proteins K02364 - 6.3.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 479.0
BYD3_k127_7170991_20 Polysaccharide biosynthesis C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000005248 234.0
BYD3_k127_7170991_21 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000001588 207.0
BYD3_k127_7170991_22 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000003395 197.0
BYD3_k127_7170991_23 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000002159 184.0
BYD3_k127_7170991_24 Heparinase II/III-like protein - - - 0.00000000000000000000000000000000000003916 162.0
BYD3_k127_7170991_25 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000008687 143.0
BYD3_k127_7170991_26 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000002789 157.0
BYD3_k127_7170991_27 Alginate lyase - - - 0.000000000000000000000000000000000004494 155.0
BYD3_k127_7170991_28 PFAM O-antigen polymerase - - - 0.000000000000000000000000000000001362 146.0
BYD3_k127_7170991_29 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000983 139.0
BYD3_k127_7170991_3 Multicopper oxidase K00368,K22348 - 1.16.3.3,1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 471.0
BYD3_k127_7170991_30 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000008821 142.0
BYD3_k127_7170991_31 Polysaccharide deacetylase - - - 0.00000000000000000000000000000009381 139.0
BYD3_k127_7170991_32 - - - - 0.000000000000000000000000000004056 136.0
BYD3_k127_7170991_33 His Kinase A (phosphoacceptor) domain - - - 0.000000000002299 79.0
BYD3_k127_7170991_35 methyltransferase - - - 0.0000000001834 72.0
BYD3_k127_7170991_36 - - - - 0.00000004968 62.0
BYD3_k127_7170991_38 lipopolysaccharide 3-alpha-galactosyltransferase activity - - - 0.0002017 53.0
BYD3_k127_7170991_4 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 387.0
BYD3_k127_7170991_5 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 356.0
BYD3_k127_7170991_6 Alginate lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006055 347.0
BYD3_k127_7170991_7 Alginate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 347.0
BYD3_k127_7170991_8 Dihydroxyacetone kinase family K07030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 347.0
BYD3_k127_7170991_9 overlaps another CDS with the same product name - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 338.0
BYD3_k127_7174800_0 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 529.0
BYD3_k127_7174800_1 Leishmanolysin - - - 0.0000000000000000000000000000000000003178 153.0
BYD3_k127_7174800_2 - - - - 0.0000000004175 64.0
BYD3_k127_7185756_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 7.62e-268 836.0
BYD3_k127_7185756_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 489.0
BYD3_k127_7185756_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001374 248.0
BYD3_k127_7185756_11 lactoylglutathione lyase activity K03088 - - 0.00000000000000000000000000000000000000000000000000000000000001762 225.0
BYD3_k127_7185756_12 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000002035 218.0
BYD3_k127_7185756_13 Tryptophan halogenase - - - 0.0000000000000000000000000000000000000000000000000000000002572 222.0
BYD3_k127_7185756_14 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000001876 197.0
BYD3_k127_7185756_15 Domain of unknown function (DUF4159) - - - 0.000000000000000000000000000000000000000000005509 176.0
BYD3_k127_7185756_16 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000002286 173.0
BYD3_k127_7185756_17 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000002339 159.0
BYD3_k127_7185756_18 PIN domain - - - 0.0000000000000000000000000000000000000009418 153.0
BYD3_k127_7185756_19 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000001338 154.0
BYD3_k127_7185756_2 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003895 406.0
BYD3_k127_7185756_20 - - - - 0.000000000000000000000000000000001432 144.0
BYD3_k127_7185756_21 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000000000000000005322 124.0
BYD3_k127_7185756_22 1,4-alpha-glucan branching enzyme activity K00700 - 2.4.1.18 0.00000000000000000000001449 111.0
BYD3_k127_7185756_23 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00000000000000001044 85.0
BYD3_k127_7185756_24 - - - - 0.000000000005857 75.0
BYD3_k127_7185756_26 Glycogen recognition site of AMP-activated protein kinase - - - 0.0001479 54.0
BYD3_k127_7185756_3 Amidase K21801 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 405.0
BYD3_k127_7185756_4 Chalcone and stilbene synthases, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 374.0
BYD3_k127_7185756_5 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 370.0
BYD3_k127_7185756_6 (SAM)-dependent K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 354.0
BYD3_k127_7185756_7 metal ion transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006276 305.0
BYD3_k127_7185756_8 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 299.0
BYD3_k127_7185756_9 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005619 282.0
BYD3_k127_7192999_0 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 462.0
BYD3_k127_7192999_1 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 426.0
BYD3_k127_7192999_2 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000001738 231.0
BYD3_k127_7192999_4 Carbamoyl-phosphate synthetase large chain domain protein K01955 - 6.3.5.5 0.0007 43.0
BYD3_k127_7210025_0 Belongs to the Orn Lys Arg decarboxylase class-II family K00928,K12526 - 2.7.2.4,4.1.1.20 3.975e-294 926.0
BYD3_k127_7210025_1 PQQ-like domain K00114,K17760 - 1.1.2.8,1.1.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007841 588.0
BYD3_k127_7210025_10 Belongs to the MurCDEF family K01924 GO:0000166,GO:0000270,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0035639,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0046872,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 372.0
BYD3_k127_7210025_11 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 359.0
BYD3_k127_7210025_12 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 330.0
BYD3_k127_7210025_13 Cytochrome c K08685 - 1.4.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 321.0
BYD3_k127_7210025_14 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 311.0
BYD3_k127_7210025_15 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002805 286.0
BYD3_k127_7210025_16 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006718 276.0
BYD3_k127_7210025_17 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928,K15792 - 6.3.2.10,6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000002883 269.0
BYD3_k127_7210025_18 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009226 259.0
BYD3_k127_7210025_19 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000003612 255.0
BYD3_k127_7210025_2 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 526.0
BYD3_k127_7210025_20 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000006464 251.0
BYD3_k127_7210025_21 lactoylglutathione lyase activity K03088 - - 0.000000000000000000000000000000000000000000000000000000008737 209.0
BYD3_k127_7210025_22 VIT family - - - 0.000000000000000000000000000000000000000000001846 170.0
BYD3_k127_7210025_23 Histidine kinase - - - 0.000000000000000000000000000000000000000003344 175.0
BYD3_k127_7210025_24 Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000001798 162.0
BYD3_k127_7210025_25 luxR family - - - 0.000000000000000000000000000000000000002818 153.0
BYD3_k127_7210025_26 Putative esterase - - - 0.0000000000000000000000000000000000002321 153.0
BYD3_k127_7210025_27 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.00000000000000000000000002244 117.0
BYD3_k127_7210025_28 HupE / UreJ protein - - - 0.0000000000000000001447 95.0
BYD3_k127_7210025_29 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752,K13818 - 2.7.7.77 0.0000000000000000002969 101.0
BYD3_k127_7210025_3 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008219 532.0
BYD3_k127_7210025_30 Belongs to the MraZ family K03925 - - 0.0000000000000000008304 92.0
BYD3_k127_7210025_31 - - - - 0.00000000000000001789 93.0
BYD3_k127_7210025_32 - - - - 0.0000000000000002478 91.0
BYD3_k127_7210025_33 Protein of unknown function (DUF2911) - - - 0.00000000000000877 87.0
BYD3_k127_7210025_34 Tetratricopeptide repeat - - - 0.00000000001494 78.0
BYD3_k127_7210025_35 Bacterial antitoxin of type II TA system, VapB - - - 0.000001046 53.0
BYD3_k127_7210025_36 methyltransferase - - - 0.00004945 55.0
BYD3_k127_7210025_37 Essential cell division protein K03589 - - 0.0001041 53.0
BYD3_k127_7210025_4 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 524.0
BYD3_k127_7210025_5 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 464.0
BYD3_k127_7210025_6 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 432.0
BYD3_k127_7210025_7 Penicillin binding protein transpeptidase domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 415.0
BYD3_k127_7210025_8 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 392.0
BYD3_k127_7210025_9 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 370.0
BYD3_k127_7211635_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 8.152e-284 889.0
BYD3_k127_7211635_1 Protein of unknown function (DUF1595) - - - 1.868e-262 831.0
BYD3_k127_7211635_10 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 486.0
BYD3_k127_7211635_11 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000984 455.0
BYD3_k127_7211635_12 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 392.0
BYD3_k127_7211635_13 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 390.0
BYD3_k127_7211635_14 Protein of unknown function (DUF2652) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 366.0
BYD3_k127_7211635_15 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 360.0
BYD3_k127_7211635_16 Aminotransferase class-V K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 338.0
BYD3_k127_7211635_17 Acetamidase/Formamidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 332.0
BYD3_k127_7211635_18 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 334.0
BYD3_k127_7211635_19 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 320.0
BYD3_k127_7211635_2 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016049,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030154,GO:0030312,GO:0030313,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 5.079e-252 798.0
BYD3_k127_7211635_20 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004102 318.0
BYD3_k127_7211635_21 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 291.0
BYD3_k127_7211635_22 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006721 283.0
BYD3_k127_7211635_23 protein histidine kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009984 298.0
BYD3_k127_7211635_24 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000234 273.0
BYD3_k127_7211635_25 2-oxoacid dehydrogenases acyltransferase (catalytic domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001267 245.0
BYD3_k127_7211635_26 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000002716 226.0
BYD3_k127_7211635_27 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000003349 224.0
BYD3_k127_7211635_28 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000005511 197.0
BYD3_k127_7211635_29 Rhomboid family - - - 0.000000000000000000000000000000000000000000000008687 183.0
BYD3_k127_7211635_3 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 8.088e-234 766.0
BYD3_k127_7211635_30 dienelactone hydrolase - - - 0.0000000000000000000000000000000004228 142.0
BYD3_k127_7211635_31 LuxR family K14979 - - 0.00000000000000000000149 101.0
BYD3_k127_7211635_32 Membrane - - - 0.00000000000002143 80.0
BYD3_k127_7211635_33 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000005922 64.0
BYD3_k127_7211635_34 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.00000003319 65.0
BYD3_k127_7211635_35 repeat-containing protein - - - 0.000006419 57.0
BYD3_k127_7211635_36 AntiSigma factor - - - 0.000233 51.0
BYD3_k127_7211635_37 Sporulation related domain - - - 0.000596 52.0
BYD3_k127_7211635_4 Protein of unknown function (DUF2867) - - - 3.356e-214 679.0
BYD3_k127_7211635_5 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 2.464e-199 658.0
BYD3_k127_7211635_6 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 560.0
BYD3_k127_7211635_7 Domain in cystathionine beta-synthase and other proteins. K01697 - 4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 544.0
BYD3_k127_7211635_8 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007509 541.0
BYD3_k127_7211635_9 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 468.0
BYD3_k127_7224877_0 lysine biosynthetic process via aminoadipic acid - - - 1.126e-210 692.0
BYD3_k127_7224877_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 574.0
BYD3_k127_7224877_10 negative regulation of transcription, DNA-templated - - - 0.000000000000000001063 91.0
BYD3_k127_7224877_11 von Willebrand factor, type A K07114 - - 0.000000000000000002608 96.0
BYD3_k127_7224877_12 Tetratricopeptide repeat - - - 0.0003727 51.0
BYD3_k127_7224877_2 Aminotransferase class I and II K11358 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 549.0
BYD3_k127_7224877_3 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 387.0
BYD3_k127_7224877_4 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 403.0
BYD3_k127_7224877_5 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 297.0
BYD3_k127_7224877_6 PFAM homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000003913 248.0
BYD3_k127_7224877_7 - - - - 0.0000000000000000000000000000000000000000000000000000003445 204.0
BYD3_k127_7224877_8 Protein of unknown function (DUF1194) K07114 - - 0.000000000000000000000000000000000000000000000001883 186.0
BYD3_k127_7251293_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 557.0
BYD3_k127_7251293_1 DNA polymerase X family K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 516.0
BYD3_k127_7251293_10 Belongs to the UPF0145 family - - - 0.0000000000000000000000000000002195 132.0
BYD3_k127_7251293_11 Sigma-70, region 4 - - - 0.000000000000000000000000003972 118.0
BYD3_k127_7251293_12 acetyltransferases and hydrolases with the alpha beta hydrolase fold K01046 - 3.1.1.3 0.000000000000000000009915 103.0
BYD3_k127_7251293_13 PFAM transcriptional coactivator pterin dehydratase K01724 - 4.2.1.96 0.00000000000000000003076 96.0
BYD3_k127_7251293_14 Putative zinc-finger - - - 0.00005527 51.0
BYD3_k127_7251293_15 Predicted membrane protein (DUF2157) - - - 0.0003992 52.0
BYD3_k127_7251293_16 - - - - 0.0004679 46.0
BYD3_k127_7251293_2 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. EgtE subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 438.0
BYD3_k127_7251293_3 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 382.0
BYD3_k127_7251293_4 Aminotransferase class-III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008236 339.0
BYD3_k127_7251293_5 Peptidase, M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 315.0
BYD3_k127_7251293_6 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000004695 200.0
BYD3_k127_7251293_7 HAD-hyrolase-like K06019 - 3.6.1.1 0.000000000000000000000000000000000000000000001382 182.0
BYD3_k127_7251293_8 Beta-lactamase superfamily domain K17837 - 3.5.2.6 0.00000000000000000000000000000000000657 144.0
BYD3_k127_7251293_9 NIPSNAP - - - 0.0000000000000000000000000000000002475 138.0
BYD3_k127_7320515_0 Peptidase dimerisation domain K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 314.0
BYD3_k127_7320515_1 ATP cob(I)alamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000001099 199.0
BYD3_k127_7320515_2 - K07018 - - 0.0000000000000000000000000000000000000000000000007872 184.0
BYD3_k127_7320515_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000001911 136.0
BYD3_k127_7320515_4 Domain of unknown function (DUF1707) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000009674 132.0
BYD3_k127_7320515_5 - - - - 0.00000001007 62.0
BYD3_k127_7320515_6 RDD family - - - 0.0002798 45.0
BYD3_k127_7328463_0 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1051.0
BYD3_k127_7328463_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 1.241e-279 871.0
BYD3_k127_7328463_10 ATPase involved in DNA repair - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002084 284.0
BYD3_k127_7328463_11 YceI-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002491 252.0
BYD3_k127_7328463_12 EXOIII K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000003901 234.0
BYD3_k127_7328463_14 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000001082 190.0
BYD3_k127_7328463_15 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.000000000000000000000000000000000002437 151.0
BYD3_k127_7328463_16 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.0000000000000000000000001659 114.0
BYD3_k127_7328463_17 - - - - 0.0000000000000000000006581 100.0
BYD3_k127_7328463_18 Belongs to the UPF0337 (CsbD) family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000003949 97.0
BYD3_k127_7328463_19 PFAM blue (type 1) copper domain protein - - - 0.00000000000001548 82.0
BYD3_k127_7328463_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3) K00164 - 1.2.4.2 5.167e-269 861.0
BYD3_k127_7328463_20 - - - - 0.000000001304 67.0
BYD3_k127_7328463_21 SMP-30/Gluconolaconase/LRE-like region K14274 - - 0.0000003074 56.0
BYD3_k127_7328463_3 Acyl-CoA dehydrogenase, middle domain - GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 1.57e-201 649.0
BYD3_k127_7328463_4 Belongs to the glycosyl hydrolase 1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006317 550.0
BYD3_k127_7328463_5 Seven times multi-haem cytochrome CxxCH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 538.0
BYD3_k127_7328463_6 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 421.0
BYD3_k127_7328463_7 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 313.0
BYD3_k127_7328463_8 PFAM short chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 308.0
BYD3_k127_7328463_9 Ser Thr phosphatase family protein K03547 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009499 276.0
BYD3_k127_7345511_0 MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 594.0
BYD3_k127_7345511_1 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 589.0
BYD3_k127_7345511_2 Peptidase m28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 544.0
BYD3_k127_7345511_3 COGs COG0160 4-aminobutyrate aminotransferase and related aminotransferase K00823,K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 444.0
BYD3_k127_7345511_4 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002421 257.0
BYD3_k127_7345511_5 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000447 208.0
BYD3_k127_7345511_6 EVE domain - - - 0.000000000000000000000000000000000000000002513 176.0
BYD3_k127_7345511_7 Putative restriction endonuclease - - - 0.0000000000000000000000000000003668 129.0
BYD3_k127_7345511_8 Putative restriction endonuclease - - - 0.000001791 54.0
BYD3_k127_73513_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 1.621e-240 762.0
BYD3_k127_73513_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 5.281e-232 754.0
BYD3_k127_73513_10 radicals which are normally produced within the cells and which are toxic to biological systems K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044237,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 306.0
BYD3_k127_73513_11 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006673 317.0
BYD3_k127_73513_12 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001876 286.0
BYD3_k127_73513_13 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000000000000000000000002515 226.0
BYD3_k127_73513_14 histidine kinase, HAMP - - - 0.00000000000000000000000000000000000000000000000000001576 205.0
BYD3_k127_73513_15 - - - - 0.00000000000000000000000000000000000000000000000002976 190.0
BYD3_k127_73513_16 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000002104 158.0
BYD3_k127_73513_17 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000000000000904 160.0
BYD3_k127_73513_18 Penicillinase repressor - - - 0.0000000000000000000000000000000006925 134.0
BYD3_k127_73513_19 Transmembrane and TPR repeat-containing protein - GO:0001763,GO:0002009,GO:0003401,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006950,GO:0007275,GO:0008150,GO:0009653,GO:0009791,GO:0009887,GO:0009888,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010468,GO:0010604,GO:0012505,GO:0019222,GO:0030154,GO:0030162,GO:0030323,GO:0030324,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0033554,GO:0034976,GO:0035239,GO:0035295,GO:0040007,GO:0042176,GO:0042692,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045732,GO:0045862,GO:0048286,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048589,GO:0048729,GO:0048731,GO:0048747,GO:0048754,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051146,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051716,GO:0055001,GO:0055002,GO:0060255,GO:0060425,GO:0060429,GO:0060441,GO:0060447,GO:0060541,GO:0060560,GO:0060562,GO:0060602,GO:0061061,GO:0061136,GO:0061138,GO:0065007,GO:0080090,GO:1901800,GO:1903050,GO:1903052,GO:1903362,GO:1903364 - 0.000000000000000000000000000000007556 148.0
BYD3_k127_73513_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 571.0
BYD3_k127_73513_20 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000007695 121.0
BYD3_k127_73513_21 - - - - 0.000000000000000000000000001208 129.0
BYD3_k127_73513_22 Prokaryotic N-terminal methylation motif - - - 0.000000000000000000000000001525 117.0
BYD3_k127_73513_23 - - - - 0.0000000000000008325 88.0
BYD3_k127_73513_24 - - - - 0.0000000000001097 80.0
BYD3_k127_73513_25 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000002231 62.0
BYD3_k127_73513_26 Tetratricopeptide repeat - - - 0.00000003608 61.0
BYD3_k127_73513_27 - - - - 0.0000002941 62.0
BYD3_k127_73513_28 efflux transmembrane transporter activity - - - 0.00002022 57.0
BYD3_k127_73513_29 Lysin motif - - - 0.00009838 53.0
BYD3_k127_73513_3 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 589.0
BYD3_k127_73513_30 TIGRFAM prepilin-type N-terminal cleavage methylation domain - - - 0.0003533 51.0
BYD3_k127_73513_4 Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 443.0
BYD3_k127_73513_5 two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 452.0
BYD3_k127_73513_6 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 401.0
BYD3_k127_73513_7 PAS domain K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 384.0
BYD3_k127_73513_8 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 375.0
BYD3_k127_73513_9 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 353.0
BYD3_k127_7367829_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 4.333e-305 950.0
BYD3_k127_7367829_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.72e-230 722.0
BYD3_k127_7367829_10 Lytic transglycosylase catalytic K08307 - - 0.0000000000000000000000000000000000000000000000000000000000006219 225.0
BYD3_k127_7367829_11 electron transfer activity K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000009197 212.0
BYD3_k127_7367829_12 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000008599 225.0
BYD3_k127_7367829_13 domain, Protein K01179,K07260,K13735 - 3.2.1.4,3.4.17.14 0.0000000000000000000000000000000000000000000000000000000286 221.0
BYD3_k127_7367829_14 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000001942 191.0
BYD3_k127_7367829_15 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000002649 177.0
BYD3_k127_7367829_16 MoaC family K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000001025 188.0
BYD3_k127_7367829_17 Ferric uptake regulator family K09825 - - 0.000000000000000000000000000001695 127.0
BYD3_k127_7367829_18 Peptidase family M23 K21471 - - 0.0000000000000000000000000002129 119.0
BYD3_k127_7367829_19 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000003573 112.0
BYD3_k127_7367829_2 AMP-binding enzyme C-terminal domain K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 444.0
BYD3_k127_7367829_20 - - - - 0.000000000000000000008431 97.0
BYD3_k127_7367829_21 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000003621 91.0
BYD3_k127_7367829_22 - - - - 0.00000000001033 75.0
BYD3_k127_7367829_23 CHAP domain - - - 0.0000004783 61.0
BYD3_k127_7367829_25 Tetratricopeptide repeat - - - 0.000002761 60.0
BYD3_k127_7367829_3 OST-HTH/LOTUS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 365.0
BYD3_k127_7367829_4 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 331.0
BYD3_k127_7367829_5 Electron transfer flavoprotein domain K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 299.0
BYD3_k127_7367829_6 O-acyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009536 286.0
BYD3_k127_7367829_7 ABC transporter K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002989 273.0
BYD3_k127_7367829_8 serine-type D-Ala-D-Ala carboxypeptidase activity K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000003631 248.0
BYD3_k127_7367829_9 Part of the ABC transporter FtsEX involved in K09811 - - 0.000000000000000000000000000000000000000000000000000000000000001355 229.0
BYD3_k127_7420653_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1050.0
BYD3_k127_7420653_1 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 468.0
BYD3_k127_7420653_3 DNA mismatch repair protein MutS - - - 0.000000000000000000007278 96.0
BYD3_k127_7423046_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 530.0
BYD3_k127_7423046_1 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006685 374.0
BYD3_k127_7423046_2 PFAM NAD dependent epimerase dehydratase family K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 343.0
BYD3_k127_7428198_0 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 499.0
BYD3_k127_7428198_1 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006304 515.0
BYD3_k127_7428198_2 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 321.0
BYD3_k127_7428198_3 PQQ-like domain K00117 - 1.1.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000073 264.0
BYD3_k127_7428198_4 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006746 258.0
BYD3_k127_7428198_5 heme binding - - - 0.00000000000000000000000000000000000000000000001675 185.0
BYD3_k127_7428198_6 SET domain K07117 - - 0.0000000000000000000000000000000000001314 147.0
BYD3_k127_7428198_7 Cupin domain - - - 0.0000000000000000000281 98.0
BYD3_k127_7436755_0 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 295.0
BYD3_k127_7436755_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001284 282.0
BYD3_k127_7436755_2 ABC 3 transport family K02075 - - 0.00000000000000000000000000000000000000000000000000000000000000003774 233.0
BYD3_k127_7436755_3 Tfp pilus assembly protein FimV K00694 - 2.4.1.12 0.0000000002171 64.0
BYD3_k127_7484935_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 529.0
BYD3_k127_7484935_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007609 508.0
BYD3_k127_7484935_10 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000007526 252.0
BYD3_k127_7484935_11 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000246 221.0
BYD3_k127_7484935_12 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000002696 185.0
BYD3_k127_7484935_13 Acetyltransferase (GNAT) domain - - - 0.00003488 53.0
BYD3_k127_7484935_2 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 485.0
BYD3_k127_7484935_3 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 411.0
BYD3_k127_7484935_4 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 388.0
BYD3_k127_7484935_5 DNA helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 344.0
BYD3_k127_7484935_6 Nucleotidyl transferase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001045 281.0
BYD3_k127_7484935_7 Sugar nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001174 275.0
BYD3_k127_7484935_8 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001062 268.0
BYD3_k127_7484935_9 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000004829 254.0
BYD3_k127_7486554_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006248 516.0
BYD3_k127_7486554_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009355 526.0
BYD3_k127_7486554_10 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 334.0
BYD3_k127_7486554_11 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008431 337.0
BYD3_k127_7486554_12 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 328.0
BYD3_k127_7486554_13 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005457 280.0
BYD3_k127_7486554_14 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000001139 267.0
BYD3_k127_7486554_15 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002345 247.0
BYD3_k127_7486554_16 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000000000000000000000000000000000000000006229 216.0
BYD3_k127_7486554_17 glycerophosphoryl diester phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000003804 208.0
BYD3_k127_7486554_18 - - - - 0.00000000000000000000000000000000000000000000002534 186.0
BYD3_k127_7486554_19 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000000002729 176.0
BYD3_k127_7486554_2 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 497.0
BYD3_k127_7486554_20 - - - - 0.000000000000000000000000000000000000000000007146 173.0
BYD3_k127_7486554_21 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000005523 168.0
BYD3_k127_7486554_22 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000448 148.0
BYD3_k127_7486554_23 PTS system sorbose subfamily IIB component K19507 - - 0.0000000000000000000000000000000005986 138.0
BYD3_k127_7486554_24 PTS system mannose/fructose/sorbose family IID component K02796 - - 0.000000000000000000000000000000001757 146.0
BYD3_k127_7486554_25 PTS HPr component phosphorylation site K11189 - - 0.0000000000000000000001924 111.0
BYD3_k127_7486554_26 protein secretion K21449 - - 0.0000000000000000000007151 102.0
BYD3_k127_7486554_27 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000001803 97.0
BYD3_k127_7486554_28 PTS system sorbose-specific iic component K02795 - - 0.00000000000000000002651 100.0
BYD3_k127_7486554_29 Cytochrome c - - - 0.0000000000000000007182 99.0
BYD3_k127_7486554_3 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 444.0
BYD3_k127_7486554_30 Regulatory protein, FmdB family - - - 0.00000000000000001129 87.0
BYD3_k127_7486554_31 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000006841 75.0
BYD3_k127_7486554_32 - - - - 0.000000009311 66.0
BYD3_k127_7486554_33 PTS system fructose IIA component - - - 0.000001013 56.0
BYD3_k127_7486554_35 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0004734 47.0
BYD3_k127_7486554_4 elongation factor SelB, winged helix K03833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 414.0
BYD3_k127_7486554_5 AIR synthase related protein, C-terminal domain K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 394.0
BYD3_k127_7486554_6 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005681 389.0
BYD3_k127_7486554_7 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 396.0
BYD3_k127_7486554_8 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006431 386.0
BYD3_k127_7486554_9 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 367.0
BYD3_k127_7532280_0 Bacterial transcriptional activator domain - - - 3.372e-291 927.0
BYD3_k127_7532280_1 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 5.086e-201 639.0
BYD3_k127_7532280_2 Manganese containing catalase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 418.0
BYD3_k127_7532280_3 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002916 301.0
BYD3_k127_7532280_4 Bacterial-like globin K06886 - - 0.000000000000000000000000001305 117.0
BYD3_k127_7532280_5 - - - - 0.00000000000000000000000693 109.0
BYD3_k127_7532280_6 Divergent 4Fe-4S mono-cluster - - - 0.00000000000000001897 86.0
BYD3_k127_7532280_7 - - - - 0.0003083 51.0
BYD3_k127_7605281_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 5.525e-235 743.0
BYD3_k127_7605281_1 Amidase K01426 - 3.5.1.4 3.364e-210 668.0
BYD3_k127_7605281_10 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 452.0
BYD3_k127_7605281_11 Nitrite reductase K00368,K08100 - 1.3.3.5,1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 438.0
BYD3_k127_7605281_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 424.0
BYD3_k127_7605281_13 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 379.0
BYD3_k127_7605281_14 Aminoacyl tRNA synthetase class II, N-terminal domain K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004488 353.0
BYD3_k127_7605281_15 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009453 342.0
BYD3_k127_7605281_16 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 332.0
BYD3_k127_7605281_17 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 301.0
BYD3_k127_7605281_18 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001036 286.0
BYD3_k127_7605281_2 B3/4 domain K01890 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000645 589.0
BYD3_k127_7605281_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000006138 268.0
BYD3_k127_7605281_21 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000008828 265.0
BYD3_k127_7605281_22 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001253 254.0
BYD3_k127_7605281_23 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000005109 230.0
BYD3_k127_7605281_24 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000009672 229.0
BYD3_k127_7605281_25 Polyprenyl synthetase K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000001555 226.0
BYD3_k127_7605281_26 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000006229 216.0
BYD3_k127_7605281_27 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000003451 214.0
BYD3_k127_7605281_28 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000002197 186.0
BYD3_k127_7605281_29 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000001638 168.0
BYD3_k127_7605281_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008874 561.0
BYD3_k127_7605281_30 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000001976 144.0
BYD3_k127_7605281_31 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.6.5.3 0.000000000000000000000000000000137 127.0
BYD3_k127_7605281_32 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000001112 122.0
BYD3_k127_7605281_33 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000007559 114.0
BYD3_k127_7605281_35 PFAM OsmC family protein - - - 0.0000000000000000000000001176 114.0
BYD3_k127_7605281_36 AMIN domain K02666 - - 0.00000000000000000000008345 105.0
BYD3_k127_7605281_37 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000006911 89.0
BYD3_k127_7605281_38 - - - - 0.000000000000002198 79.0
BYD3_k127_7605281_39 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000002319 82.0
BYD3_k127_7605281_4 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009697 536.0
BYD3_k127_7605281_40 CopC domain K07156 - - 0.000000008854 62.0
BYD3_k127_7605281_41 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000666 58.0
BYD3_k127_7605281_42 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000001012 54.0
BYD3_k127_7605281_43 Major Facilitator Superfamily - - - 0.000004761 53.0
BYD3_k127_7605281_44 - - - - 0.000009839 48.0
BYD3_k127_7605281_45 - - - - 0.00001349 47.0
BYD3_k127_7605281_46 - - - - 0.00006582 55.0
BYD3_k127_7605281_47 AAA domain, putative AbiEii toxin, Type IV TA system K10021 - - 0.0005558 48.0
BYD3_k127_7605281_5 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 518.0
BYD3_k127_7605281_6 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 535.0
BYD3_k127_7605281_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00334,K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 486.0
BYD3_k127_7605281_8 Aminotransferase class I and II K10907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008676 477.0
BYD3_k127_7605281_9 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 470.0
BYD3_k127_7608221_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1112.0
BYD3_k127_7608221_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.998e-295 919.0
BYD3_k127_7608221_10 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 477.0
BYD3_k127_7608221_11 DegT/DnrJ/EryC1/StrS aminotransferase family K18653 GO:0003674,GO:0003824,GO:0005488,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009987,GO:0016740,GO:0016769,GO:0016999,GO:0017000,GO:0017144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044249,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 452.0
BYD3_k127_7608221_12 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 445.0
BYD3_k127_7608221_13 Alternative locus ID K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 411.0
BYD3_k127_7608221_14 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 407.0
BYD3_k127_7608221_15 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 401.0
BYD3_k127_7608221_16 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007099 375.0
BYD3_k127_7608221_17 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 377.0
BYD3_k127_7608221_18 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 367.0
BYD3_k127_7608221_19 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006921 342.0
BYD3_k127_7608221_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 4.428e-202 653.0
BYD3_k127_7608221_20 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009395 338.0
BYD3_k127_7608221_21 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 334.0
BYD3_k127_7608221_22 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003943 324.0
BYD3_k127_7608221_23 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 328.0
BYD3_k127_7608221_24 undecaprenyl-phosphate glucose phosphotransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009716 312.0
BYD3_k127_7608221_25 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 303.0
BYD3_k127_7608221_26 Capsule assembly protein Wzi - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 306.0
BYD3_k127_7608221_27 Metallopeptidase family M24 K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001188 297.0
BYD3_k127_7608221_28 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003031 280.0
BYD3_k127_7608221_29 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003914 284.0
BYD3_k127_7608221_3 Hexapeptide repeat of succinyl-transferase K13018 - 2.3.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 593.0
BYD3_k127_7608221_30 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000002359 241.0
BYD3_k127_7608221_31 Male sterility protein K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000003265 244.0
BYD3_k127_7608221_32 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000003194 232.0
BYD3_k127_7608221_33 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000000000002285 219.0
BYD3_k127_7608221_34 RadC-like JAB domain K03630 - - 0.00000000000000000000000000000000000000000000000000000000000004418 227.0
BYD3_k127_7608221_35 Forms part of the polypeptide exit tunnel K02926 - - 0.0000000000000000000000000000000000000000000000000000000000001204 224.0
BYD3_k127_7608221_36 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000003077 214.0
BYD3_k127_7608221_37 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0008150,GO:0015934,GO:0016020,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071944,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000007492 207.0
BYD3_k127_7608221_38 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000000009474 203.0
BYD3_k127_7608221_39 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000000000000000000000000000002079 217.0
BYD3_k127_7608221_4 UDP binding domain K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 569.0
BYD3_k127_7608221_40 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000006423 204.0
BYD3_k127_7608221_41 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000007772 206.0
BYD3_k127_7608221_42 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000007941 196.0
BYD3_k127_7608221_43 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000000000008123 188.0
BYD3_k127_7608221_44 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000825 186.0
BYD3_k127_7608221_45 MotA/TolQ/ExbB proton channel family K03562 - - 0.0000000000000000000000000000000000000000000000009068 184.0
BYD3_k127_7608221_46 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000003936 191.0
BYD3_k127_7608221_47 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000000804 173.0
BYD3_k127_7608221_48 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000001201 188.0
BYD3_k127_7608221_5 UDP binding domain K13015 - 1.1.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 562.0
BYD3_k127_7608221_50 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000157 158.0
BYD3_k127_7608221_51 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000007155 153.0
BYD3_k127_7608221_52 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000003945 147.0
BYD3_k127_7608221_53 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000005097 146.0
BYD3_k127_7608221_54 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000006361 145.0
BYD3_k127_7608221_55 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000002819 138.0
BYD3_k127_7608221_56 OmpA family K03640 - - 0.00000000000000000000000000000000004359 141.0
BYD3_k127_7608221_57 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.00000000000000000000000000001166 124.0
BYD3_k127_7608221_58 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000004282 121.0
BYD3_k127_7608221_59 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000173 116.0
BYD3_k127_7608221_6 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 510.0
BYD3_k127_7608221_60 methyltransferase - - - 0.000000000000000000000000001891 122.0
BYD3_k127_7608221_61 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925,K07102 - 2.7.1.221 0.0000000000000000000000001106 112.0
BYD3_k127_7608221_62 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000002819 105.0
BYD3_k127_7608221_63 COG1214, inactive homolog of metal-dependent proteases K01409,K14742 GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000003145 115.0
BYD3_k127_7608221_64 Biopolymer transport protein K03559,K03560 - - 0.0000000000000000000000004215 110.0
BYD3_k127_7608221_65 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000004738 110.0
BYD3_k127_7608221_66 polysaccharide biosynthetic process - - - 0.00000000000000000000055 111.0
BYD3_k127_7608221_67 Outer membrane lipoprotein K05807 - - 0.0000000000000000001402 98.0
BYD3_k127_7608221_68 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000176 90.0
BYD3_k127_7608221_69 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000001398 86.0
BYD3_k127_7608221_7 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 515.0
BYD3_k127_7608221_70 Ribosomal protein L36 K02919 - - 0.0000000000006818 69.0
BYD3_k127_7608221_71 cellulase activity K06882 - - 0.0000000000006871 80.0
BYD3_k127_7608221_72 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000222 70.0
BYD3_k127_7608221_73 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043933,GO:0044085,GO:0044464,GO:0051259,GO:0051260,GO:0051301,GO:0065003,GO:0071840 - 0.000000000003384 76.0
BYD3_k127_7608221_74 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000003759 78.0
BYD3_k127_7608221_75 50S ribosomal protein L30 K02907 - - 0.0000000005384 63.0
BYD3_k127_7608221_76 positive regulation of growth rate - - - 0.000000002013 69.0
BYD3_k127_7608221_77 - - - - 0.00000003268 66.0
BYD3_k127_7608221_78 Chain length determinant protein - - - 0.00001759 56.0
BYD3_k127_7608221_79 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0009762 49.0
BYD3_k127_7608221_8 3-beta hydroxysteroid dehydrogenase/isomerase family K01710,K08678 - 4.1.1.35,4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007468 492.0
BYD3_k127_7608221_9 Polysaccharide biosynthesis/export protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006298 486.0
BYD3_k127_7624395_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 531.0
BYD3_k127_7624395_1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 516.0
BYD3_k127_7624395_10 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000001021 175.0
BYD3_k127_7624395_11 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000003905 179.0
BYD3_k127_7624395_12 YceI-like domain - - - 0.0000000000000000000000000000000000001541 153.0
BYD3_k127_7624395_14 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000345 147.0
BYD3_k127_7624395_15 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000003572 130.0
BYD3_k127_7624395_16 amine dehydrogenase activity K00504,K12132 - 1.14.17.3,2.7.11.1 0.000000000000000000000000001298 121.0
BYD3_k127_7624395_17 - - - - 0.000000000000000000000000002743 124.0
BYD3_k127_7624395_18 Protein of unknown function (DUF1272) K09984 - - 0.0000000000000000000003143 109.0
BYD3_k127_7624395_19 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000005414 103.0
BYD3_k127_7624395_2 Belongs to the citrate synthase family K01647 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 456.0
BYD3_k127_7624395_20 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000000005248 78.0
BYD3_k127_7624395_22 CHRD domain - - - 0.000001061 57.0
BYD3_k127_7624395_23 Binds directly to 16S ribosomal RNA K02968 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.000001894 53.0
BYD3_k127_7624395_24 - - - - 0.000003047 55.0
BYD3_k127_7624395_25 Putative zinc-finger - - - 0.000022 56.0
BYD3_k127_7624395_26 SnoaL-like domain - - - 0.00005117 55.0
BYD3_k127_7624395_27 Protein of unknown function (DUF4242) - - - 0.00009476 53.0
BYD3_k127_7624395_28 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K07804 - - 0.0002877 53.0
BYD3_k127_7624395_3 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000001017 268.0
BYD3_k127_7624395_4 PFAM blue (type 1) copper domain protein K00368,K02638 - 1.7.2.1 0.000000000000000000000000000000000000000000000000000000000009543 217.0
BYD3_k127_7624395_5 Belongs to the pseudouridine synthase RsuA family K06178,K06183 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19,5.4.99.22 0.00000000000000000000000000000000000000000000000000000000002614 225.0
BYD3_k127_7624395_6 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000000006055 196.0
BYD3_k127_7624395_7 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000007812 193.0
BYD3_k127_7624395_8 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000138 186.0
BYD3_k127_7624395_9 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000006966 172.0
BYD3_k127_7696745_0 ABC transporter, ATP-binding protein - - - 7.954e-203 658.0
BYD3_k127_7696745_1 Mo-co oxidoreductase dimerisation domain K17225 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 462.0
BYD3_k127_7696745_10 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000437 293.0
BYD3_k127_7696745_11 NOL1 NOP2 sun family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005574 283.0
BYD3_k127_7696745_12 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002754 265.0
BYD3_k127_7696745_13 M61 glycyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000006976 243.0
BYD3_k127_7696745_14 Peptidyl-prolyl cis-trans K03772,K03773 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000001078 213.0
BYD3_k127_7696745_15 endonuclease activity - - - 0.0000000000000000000000000000000000000000000000000000005209 208.0
BYD3_k127_7696745_16 - - - - 0.000000000000000000000000000000000000000000001102 179.0
BYD3_k127_7696745_17 Domain of unknown function (DUF892) - - - 0.000000000000000000000000000000000000000000004897 170.0
BYD3_k127_7696745_18 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.000000000000000000000000000000000000000000223 175.0
BYD3_k127_7696745_19 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter - - - 0.000000000000000000000000000000000000002458 166.0
BYD3_k127_7696745_2 C4-dicarboxylate anaerobic carrier - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 461.0
BYD3_k127_7696745_20 Serine Threonine protein kinase - - - 0.00000000000000000000000000000000000003468 150.0
BYD3_k127_7696745_21 metallocarboxypeptidase activity - - - 0.00000000000000000000000000001297 134.0
BYD3_k127_7696745_23 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000000000000000689 112.0
BYD3_k127_7696745_24 nUDIX hydrolase K03574,K08320 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008413,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0030145,GO:0033554,GO:0034641,GO:0035539,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044715,GO:0044716,GO:0046483,GO:0046872,GO:0046914,GO:0047429,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55,3.6.1.65 0.000000000000000000000000439 115.0
BYD3_k127_7696745_25 - - - - 0.00000000000001432 80.0
BYD3_k127_7696745_26 Protein of unknown function (DUF454) K01243,K03784,K09790,K11783 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 2.4.2.1,3.2.2.26,3.2.2.9 0.0000000000125 68.0
BYD3_k127_7696745_27 UPF0391 membrane protein - - - 0.00000000001677 66.0
BYD3_k127_7696745_28 - - - - 0.0000000001062 64.0
BYD3_k127_7696745_29 DNA-templated transcription, termination K03628 - - 0.00001327 53.0
BYD3_k127_7696745_3 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 448.0
BYD3_k127_7696745_30 Tetratricopeptide repeat - - - 0.0005214 50.0
BYD3_k127_7696745_4 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009541 474.0
BYD3_k127_7696745_5 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 407.0
BYD3_k127_7696745_6 exporters of the RND superfamily K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004623 378.0
BYD3_k127_7696745_7 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 334.0
BYD3_k127_7696745_8 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 334.0
BYD3_k127_7696745_9 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 295.0
BYD3_k127_7775045_0 Tripartite tricarboxylate transporter TctA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 435.0
BYD3_k127_7775045_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 412.0
BYD3_k127_7775045_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 366.0
BYD3_k127_7775045_3 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 317.0
BYD3_k127_7775045_4 Belongs to the serpin family K13963 - - 0.0000000000000000000000000000000000000000000000001181 184.0
BYD3_k127_7775045_5 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000005958 141.0
BYD3_k127_7775045_6 - - - - 0.0001603 46.0
BYD3_k127_7781553_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 7.039e-211 668.0
BYD3_k127_7781553_1 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 478.0
BYD3_k127_7781553_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K01281 - 3.4.14.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000005119 263.0
BYD3_k127_7802996_0 Belongs to the peptidase S8 family - - - 6.808e-256 809.0
BYD3_k127_7802996_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 564.0
BYD3_k127_7802996_10 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.00000000000000000000000000000000000000000000000000002855 198.0
BYD3_k127_7802996_11 NHL repeat K13730 - - 0.0000000000000008313 87.0
BYD3_k127_7802996_12 Peptidoglycan binding domain protein - - - 0.0000000001341 69.0
BYD3_k127_7802996_13 Ig domain protein group 1 domain protein - - - 0.0000001183 63.0
BYD3_k127_7802996_14 - K01822 - 5.3.3.1 0.000000338 58.0
BYD3_k127_7802996_15 - - - - 0.00002085 55.0
BYD3_k127_7802996_16 Evidence 5 No homology to any previously reported sequences - - - 0.0007777 51.0
BYD3_k127_7802996_2 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 433.0
BYD3_k127_7802996_3 Dehydrogenase K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008122 443.0
BYD3_k127_7802996_4 cAMP biosynthetic process K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006725 318.0
BYD3_k127_7802996_5 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 286.0
BYD3_k127_7802996_6 competence protein COMEC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001381 269.0
BYD3_k127_7802996_7 Protein of unknown function (DUF1326) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003808 244.0
BYD3_k127_7802996_8 Pyridine nucleotide-disulphide oxidoreductase K07222 - - 0.0000000000000000000000000000000000000000000000000000000000000000002738 233.0
BYD3_k127_7802996_9 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000001481 229.0
BYD3_k127_7838414_0 lysine biosynthetic process via aminoadipic acid - - - 1.637e-217 707.0
BYD3_k127_7838414_1 repeat protein - - - 3.872e-214 686.0
BYD3_k127_7838414_10 - - - - 0.000000000000000000000000000000002255 132.0
BYD3_k127_7838414_11 - - - - 0.000000000000000000000000000000004278 145.0
BYD3_k127_7838414_12 Cytochrome C' - - - 0.00000000000000000000000003583 114.0
BYD3_k127_7838414_13 - - - - 0.00000000000000001636 88.0
BYD3_k127_7838414_14 lysine biosynthetic process via aminoadipic acid - - - 0.00000000009382 71.0
BYD3_k127_7838414_15 Periplasmic or secreted lipoprotein - - - 0.00006527 54.0
BYD3_k127_7838414_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 8.193e-214 687.0
BYD3_k127_7838414_3 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 524.0
BYD3_k127_7838414_4 PFAM Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 323.0
BYD3_k127_7838414_5 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006431 279.0
BYD3_k127_7838414_6 Domain of unknown function (DUF4403) - - - 0.00000000000000000000000000000000000000000000000000000000000003623 237.0
BYD3_k127_7838414_7 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000006989 212.0
BYD3_k127_7838414_8 - - - - 0.000000000000000000000000000000000000000002362 161.0
BYD3_k127_7838414_9 Domain of unknown function (DUF4142) - - - 0.0000000000000000000000000000000000000003005 170.0
BYD3_k127_7850234_0 Penicillin amidase K01434 - 3.5.1.11 3.424e-287 900.0
BYD3_k127_7850234_1 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 447.0
BYD3_k127_7850234_10 protein import - - - 0.000000000000000000000000000000005294 139.0
BYD3_k127_7850234_11 cheY-homologous receiver domain - - - 0.00000000000000000000005692 105.0
BYD3_k127_7850234_12 Cysteine-rich CPXCG - - - 0.000000000000000002303 86.0
BYD3_k127_7850234_13 - - - - 0.0000000001125 71.0
BYD3_k127_7850234_14 - - - - 0.000000002228 68.0
BYD3_k127_7850234_15 esterase K03932 - - 0.00002454 57.0
BYD3_k127_7850234_2 Divalent cation transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000842 446.0
BYD3_k127_7850234_3 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 413.0
BYD3_k127_7850234_4 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007853 413.0
BYD3_k127_7850234_5 Protein of unknown function (DUF3089) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004623 364.0
BYD3_k127_7850234_6 N-acyl phosphatidylethanolamine phospholipase D K13985 GO:0001523,GO:0001659,GO:0001750,GO:0003674,GO:0003824,GO:0004620,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0005768,GO:0005769,GO:0005794,GO:0005829,GO:0005886,GO:0005929,GO:0006066,GO:0006576,GO:0006629,GO:0006644,GO:0006650,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007568,GO:0008081,GO:0008150,GO:0008152,GO:0008270,GO:0009308,GO:0009987,GO:0012505,GO:0016020,GO:0016101,GO:0016298,GO:0016787,GO:0016788,GO:0019637,GO:0031090,GO:0031253,GO:0031347,GO:0031349,GO:0031410,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0034308,GO:0034641,GO:0035900,GO:0036477,GO:0042439,GO:0042578,GO:0042592,GO:0042622,GO:0042802,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043603,GO:0044106,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044441,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045595,GO:0045597,GO:0045598,GO:0045600,GO:0046337,GO:0046486,GO:0046872,GO:0046914,GO:0048518,GO:0048519,GO:0048521,GO:0048522,GO:0048583,GO:0048584,GO:0048871,GO:0050727,GO:0050729,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050896,GO:0051094,GO:0060170,GO:0060259,GO:0065007,GO:0065008,GO:0070013,GO:0070290,GO:0070291,GO:0070292,GO:0071704,GO:0071944,GO:0080134,GO:0090335,GO:0090336,GO:0097458,GO:0097708,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098590,GO:0120025,GO:0120038,GO:1901564,GO:1901615,GO:1903998,GO:1903999,GO:2000252 3.1.4.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000002828 273.0
BYD3_k127_7850234_7 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000002336 230.0
BYD3_k127_7850234_8 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000001227 176.0
BYD3_k127_7850234_9 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000009032 159.0
BYD3_k127_7865042_0 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005847 526.0
BYD3_k127_7865042_1 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 429.0
BYD3_k127_7865042_10 Cytochrome c7 and related cytochrome c - - - 0.000000001379 60.0
BYD3_k127_7865042_11 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.00000007387 59.0
BYD3_k127_7865042_12 heat shock protein binding - - - 0.000005085 58.0
BYD3_k127_7865042_2 Cytochrome c554 and c-prime K03620 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 332.0
BYD3_k127_7865042_3 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006878 315.0
BYD3_k127_7865042_5 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000001893 206.0
BYD3_k127_7865042_6 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.00000000000000000000000000000000000000000000000000004078 200.0
BYD3_k127_7865042_7 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000000000000138 201.0
BYD3_k127_7865042_8 - - - - 0.000000000000000000000000000000000000000000000001298 182.0
BYD3_k127_7865042_9 Rieske [2Fe-2S] domain K00411,K02636,K03886 - 1.10.2.2,1.10.9.1 0.00000000000000000000000000000000000000000000001146 192.0
BYD3_k127_7882776_0 PFAM metal-dependent phosphohydrolase HD sub domain K09163 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009183 309.0
BYD3_k127_7882776_1 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000943 283.0
BYD3_k127_7882776_10 DNA-binding response regulator K07713 - - 0.00000002521 56.0
BYD3_k127_7882776_11 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.000002294 56.0
BYD3_k127_7882776_2 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.000000000000000000000000000000000000000000000000006239 189.0
BYD3_k127_7882776_3 RDD family - - - 0.0000000000000000000000000000000000003793 156.0
BYD3_k127_7882776_4 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000001057 138.0
BYD3_k127_7882776_5 OmpA family K03640 - - 0.0000000000000000000000000000001117 131.0
BYD3_k127_7882776_6 COG1651 Protein-disulfide isomerase K21990 - - 0.00000000000000001094 95.0
BYD3_k127_7882776_7 Protein of unknown function (DUF3618) - - - 0.000000000000009503 86.0
BYD3_k127_7882776_8 - - - - 0.00000000231 68.0
BYD3_k127_7882776_9 Universal stress protein family - - - 0.00000001306 63.0
BYD3_k127_7886563_0 amine dehydrogenase activity K17285 - - 1.294e-251 781.0
BYD3_k127_7886563_1 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 428.0
BYD3_k127_7886563_10 COG3005 Nitrate TMAO reductases, membrane-bound tetraheme cytochrome c subunit K02569 - - 0.000000002405 69.0
BYD3_k127_7886563_11 Protein of unknown function (DUF2892) - - - 0.000000004359 65.0
BYD3_k127_7886563_12 Tetratricopeptide repeats - - - 0.0008169 51.0
BYD3_k127_7886563_2 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008092 415.0
BYD3_k127_7886563_3 response regulator K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 314.0
BYD3_k127_7886563_4 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 319.0
BYD3_k127_7886563_5 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000001362 231.0
BYD3_k127_7886563_6 - - - - 0.000000000000000000000000000000000000000000000000000000000004999 215.0
BYD3_k127_7886563_7 ferredoxin-NADP+ reductase activity - - - 0.000000000000000000000000000000000000000000002831 176.0
BYD3_k127_7886563_8 Transcriptional regulatory protein, C terminal - - - 0.0000000000000936 75.0
BYD3_k127_7886563_9 - - - - 0.0000000001547 73.0
BYD3_k127_7886832_0 Gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 9.044e-284 905.0
BYD3_k127_7886832_1 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 3.162e-224 719.0
BYD3_k127_7886832_10 - - - - 0.00000002436 63.0
BYD3_k127_7886832_2 Dehydrogenase - - - 4.037e-210 681.0
BYD3_k127_7886832_3 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000002965 241.0
BYD3_k127_7886832_4 Conserved hypothetical protein (DUF2461) - - - 0.00000000000000000000000000000000000000000000000000000000000000000004082 239.0
BYD3_k127_7886832_5 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000002404 154.0
BYD3_k127_7886832_6 Metal-sensitive transcriptional repressor K21600 - - 0.00000000000000000000001939 109.0
BYD3_k127_7886832_7 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.0000000000000000002271 104.0
BYD3_k127_7886832_8 Protein of unknown function (DUF454) K09790 - - 0.000000000000000075 84.0
BYD3_k127_7886832_9 PFAM Heavy metal transport detoxification protein - - - 0.000000000000003755 78.0
BYD3_k127_7888044_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 496.0
BYD3_k127_7888044_1 Uncharacterised protein family (UPF0182) K09118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007142 441.0
BYD3_k127_7888044_10 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000004843 92.0
BYD3_k127_7888044_11 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000004705 73.0
BYD3_k127_7888044_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 407.0
BYD3_k127_7888044_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007309 371.0
BYD3_k127_7888044_4 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009653 312.0
BYD3_k127_7888044_5 Acyl transferase domain K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000008843 272.0
BYD3_k127_7888044_6 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000006771 262.0
BYD3_k127_7888044_7 NDK K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000001931 186.0
BYD3_k127_7888044_8 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000003122 123.0
BYD3_k127_7888044_9 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 - - - 0.000000000000000000001845 102.0
BYD3_k127_7888774_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007843 478.0
BYD3_k127_7888774_1 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 338.0
BYD3_k127_7888774_2 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004274 345.0
BYD3_k127_7888774_3 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000000001945 136.0
BYD3_k127_7888774_4 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.000000000000000000000000000000002594 133.0
BYD3_k127_7888774_5 membrane transporter protein K07090 - - 0.000000000000000000001404 104.0
BYD3_k127_7917411_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.0 1256.0
BYD3_k127_7917411_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 7.066e-217 685.0
BYD3_k127_7917411_10 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002613 272.0
BYD3_k127_7917411_11 Belongs to the UPF0173 family - - - 0.00000000000000000000000000000000000000000000000000000000000003756 221.0
BYD3_k127_7917411_12 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000004495 225.0
BYD3_k127_7917411_13 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000002045 166.0
BYD3_k127_7917411_14 Biotin/lipoate A/B protein ligase family K03800 - 6.3.1.20 0.0000000000000000000000000000000000001311 152.0
BYD3_k127_7917411_15 Putative restriction endonuclease - - - 0.00000000000000000000000000000000004014 143.0
BYD3_k127_7917411_16 PFAM PIN domain - - - 0.000000000000000000000000000000000816 135.0
BYD3_k127_7917411_17 PFAM Lytic transglycosylase catalytic K08309 - - 0.000000000000000000000000000000002895 149.0
BYD3_k127_7917411_18 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000004584 106.0
BYD3_k127_7917411_19 Cold-Shock Protein K03704 - - 0.00000000000000000000001789 101.0
BYD3_k127_7917411_2 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0030312,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 3.515e-215 701.0
BYD3_k127_7917411_20 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000001137 93.0
BYD3_k127_7917411_21 Domain of unknown function (DUF4126) - - - 0.00000006278 64.0
BYD3_k127_7917411_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 482.0
BYD3_k127_7917411_4 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 395.0
BYD3_k127_7917411_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046 369.0
BYD3_k127_7917411_6 TIGRFAM oligopeptide dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031,K02032,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007707 383.0
BYD3_k127_7917411_7 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 342.0
BYD3_k127_7917411_8 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008925 291.0
BYD3_k127_7917411_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007289 296.0
BYD3_k127_7924060_0 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second K01958 - 6.4.1.1 0.0 1332.0
BYD3_k127_7924060_1 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005807 353.0
BYD3_k127_7924060_10 Carboxypeptidase regulatory-like domain K02014 - - 0.00000000005384 74.0
BYD3_k127_7924060_11 prlF antitoxin for toxin YhaV_toxin K19156 - - 0.000000006787 58.0
BYD3_k127_7924060_12 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000118 59.0
BYD3_k127_7924060_13 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.00000008391 59.0
BYD3_k127_7924060_2 haloacid dehalogenase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000814 308.0
BYD3_k127_7924060_3 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 302.0
BYD3_k127_7924060_4 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007857 288.0
BYD3_k127_7924060_5 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001087 256.0
BYD3_k127_7924060_6 cellular response to DNA damage stimulus - GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.000000000000000000000000000000000002799 145.0
BYD3_k127_7924060_7 - - - - 0.00000000000000000000000000002166 124.0
BYD3_k127_7924060_8 Transcriptional regulator PadR-like family - - - 0.00000000000000000003244 94.0
BYD3_k127_7924060_9 - - - - 0.00000000000000001784 91.0
BYD3_k127_8011330_0 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 588.0
BYD3_k127_8011330_1 ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008757 362.0
BYD3_k127_8011330_10 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000005325 175.0
BYD3_k127_8011330_11 Glycosyl transferase 4-like K03525 - 2.7.1.33 0.00000000000000000000000000000000000367 155.0
BYD3_k127_8011330_12 COG4335 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000008277 136.0
BYD3_k127_8011330_13 - - - - 0.0000000000000000000000000008971 129.0
BYD3_k127_8011330_14 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000596 106.0
BYD3_k127_8011330_15 Methyltransferase domain - - - 0.00000000000361 76.0
BYD3_k127_8011330_16 protein conserved in bacteria K01768 - 4.6.1.1 0.000000002461 68.0
BYD3_k127_8011330_17 Lipopolysaccharide-assembly, LptC-related - - - 0.000314 51.0
BYD3_k127_8011330_2 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 360.0
BYD3_k127_8011330_3 SIS domain K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007887 342.0
BYD3_k127_8011330_4 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005505 302.0
BYD3_k127_8011330_5 DAHP synthetase I family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000672 302.0
BYD3_k127_8011330_6 Bacterial membrane protein YfhO - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001627 289.0
BYD3_k127_8011330_7 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000006045 246.0
BYD3_k127_8011330_8 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000002351 254.0
BYD3_k127_8011330_9 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000004364 197.0
BYD3_k127_8125271_0 lysine biosynthetic process via aminoadipic acid - - - 5.297e-200 650.0
BYD3_k127_8125271_1 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 521.0
BYD3_k127_8125271_10 - - - - 0.00006029 54.0
BYD3_k127_8125271_2 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 410.0
BYD3_k127_8125271_3 NADPH-dependent FMN reductase K19784 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002282 280.0
BYD3_k127_8125271_4 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008314 286.0
BYD3_k127_8125271_5 Belongs to the glycosyl hydrolase 32 family - - - 0.0000000000000000000000001445 115.0
BYD3_k127_8125271_6 cobalamin-transporting ATPase activity - - - 0.000000000000004295 84.0
BYD3_k127_8125271_7 SusD family K21572 - - 0.000000000005783 78.0
BYD3_k127_8125271_8 Cupin 2, conserved barrel domain protein - - - 0.0000000009194 67.0
BYD3_k127_8125271_9 Copper binding proteins, plastocyanin/azurin family - - - 0.00000005482 61.0
BYD3_k127_8136344_0 FAD linked oxidases, C-terminal domain K18930 - - 4.965e-305 963.0
BYD3_k127_8136344_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 8.524e-274 856.0
BYD3_k127_8136344_10 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 465.0
BYD3_k127_8136344_11 Thiolase, C-terminal domain K00626,K07508 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 434.0
BYD3_k127_8136344_12 COG1899 Deoxyhypusine synthase K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 411.0
BYD3_k127_8136344_13 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 402.0
BYD3_k127_8136344_14 ABC transporter K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 399.0
BYD3_k127_8136344_15 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 361.0
BYD3_k127_8136344_16 Glycosyltransferase family 9 (heptosyltransferase) K12982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 330.0
BYD3_k127_8136344_17 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 309.0
BYD3_k127_8136344_18 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 300.0
BYD3_k127_8136344_19 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000968 312.0
BYD3_k127_8136344_2 Elongation factor G C-terminus K06207 - - 3.122e-264 833.0
BYD3_k127_8136344_20 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001878 284.0
BYD3_k127_8136344_21 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000002192 268.0
BYD3_k127_8136344_22 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005476 245.0
BYD3_k127_8136344_23 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000001867 239.0
BYD3_k127_8136344_24 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0048033,GO:0048034,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000000000000000000000000000000000000000000000001224 211.0
BYD3_k127_8136344_25 Glycosyl transferase family 2 K08301 - - 0.000000000000000000000000000000000000000000000000000001163 201.0
BYD3_k127_8136344_26 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000006609 195.0
BYD3_k127_8136344_27 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000001833 202.0
BYD3_k127_8136344_28 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000007957 197.0
BYD3_k127_8136344_29 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576 - 0.0000000000000000000000000000000000001782 147.0
BYD3_k127_8136344_3 - - - - 8.573e-233 743.0
BYD3_k127_8136344_30 Phospholipid methyltransferase - - - 0.000000000000000000000000000000006198 134.0
BYD3_k127_8136344_31 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000046 142.0
BYD3_k127_8136344_32 - - - - 0.000000000000000000004425 102.0
BYD3_k127_8136344_33 Tetratricopeptide repeat - - - 0.000000000000000000009212 106.0
BYD3_k127_8136344_34 deaminase K01493 - 3.5.4.12 0.0000000000000000002832 94.0
BYD3_k127_8136344_35 Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position K11211 - 2.7.1.166 0.0000000000000001402 90.0
BYD3_k127_8136344_36 - - - - 0.00000000000003973 78.0
BYD3_k127_8136344_37 - - - - 0.0000000001028 72.0
BYD3_k127_8136344_38 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000127 63.0
BYD3_k127_8136344_39 Protein of unknown function (DUF721) - - - 0.00000003065 64.0
BYD3_k127_8136344_4 Belongs to the peptidase M16 family K07263 - - 2.408e-207 662.0
BYD3_k127_8136344_40 - - - - 0.000002494 59.0
BYD3_k127_8136344_41 CobQ/CobB/MinD/ParA nucleotide binding domain K08252,K16692 - 2.7.10.1 0.00001634 57.0
BYD3_k127_8136344_42 helix_turn_helix, arabinose operon control protein - - - 0.0003777 51.0
BYD3_k127_8136344_5 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006848 563.0
BYD3_k127_8136344_6 PglZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 534.0
BYD3_k127_8136344_7 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 532.0
BYD3_k127_8136344_8 acyl-CoA transferases carnitine dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 496.0
BYD3_k127_8136344_9 nucleic acid phosphodiester bond hydrolysis K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 484.0
BYD3_k127_8188016_0 Protein export membrane protein - - - 0.0 1043.0
BYD3_k127_8188016_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 8.435e-194 625.0
BYD3_k127_8188016_2 PFAM Glucose Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000831 378.0
BYD3_k127_8188016_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000009113 170.0
BYD3_k127_8188016_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000003636 107.0
BYD3_k127_8188016_5 helix_turn_helix, Arsenical Resistance Operon Repressor K22042 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000000001332 66.0
BYD3_k127_8192478_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02504,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005213 603.0
BYD3_k127_8192478_1 RNA polymerase binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 627.0
BYD3_k127_8192478_10 Tryptophan halogenase - - - 0.00000000000000000000000000006912 132.0
BYD3_k127_8192478_11 TIGRFAM competence protein ComEA helix-hairpin-helix repeat K02237 - - 0.00000000000000001838 93.0
BYD3_k127_8192478_12 amine dehydrogenase activity - - - 0.0000000001538 72.0
BYD3_k127_8192478_2 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 556.0
BYD3_k127_8192478_3 4Fe-4S single cluster domain K06871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 512.0
BYD3_k127_8192478_4 Quinohemoprotein amine dehydrogenase, alpha subunit domain IV K08685 - 1.4.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004234 396.0
BYD3_k127_8192478_5 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 366.0
BYD3_k127_8192478_6 Type II secretion system (T2SS), protein F K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008514 251.0
BYD3_k127_8192478_7 Predicted permease YjgP/YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001436 269.0
BYD3_k127_8192478_8 Predicted permease YjgP/YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005748 257.0
BYD3_k127_8192478_9 Quinohemoprotein amine dehydrogenase, gamma subunit - - - 0.000000000000000000000000000000000000000000004814 173.0
BYD3_k127_8195978_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0 2165.0
BYD3_k127_8195978_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 419.0
BYD3_k127_8195978_2 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046 345.0
BYD3_k127_8195978_3 smart pdz dhr glgf K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 307.0
BYD3_k127_8195978_4 - - - - 0.00000000000000000000000000000001476 141.0
BYD3_k127_8195978_5 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000001757 88.0
BYD3_k127_8195978_6 Surface antigen K07277 - - 0.0000000000738 68.0
BYD3_k127_828064_0 AMP-dependent synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 361.0
BYD3_k127_828064_1 Cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 321.0
BYD3_k127_8309138_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006341 312.0
BYD3_k127_8309138_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008592 278.0
BYD3_k127_8309138_2 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006169 271.0
BYD3_k127_8309138_3 Glycosyltransferase like family 2 K20444 - - 0.000000000000000000000000000000000005136 152.0
BYD3_k127_8309138_4 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000008784 152.0
BYD3_k127_8309138_5 Glycosyltransferase like family 2 - - - 0.0000000000000000006517 98.0
BYD3_k127_8309138_6 Polysaccharide biosynthesis protein - - - 0.000000000000003732 88.0
BYD3_k127_8420819_0 Collagenase K08303 - - 0.0 1031.0
BYD3_k127_8420819_1 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 593.0
BYD3_k127_8420819_10 PFAM O-methyltransferase K00588 - 2.1.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 315.0
BYD3_k127_8420819_11 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007825 310.0
BYD3_k127_8420819_12 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001734 284.0
BYD3_k127_8420819_13 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000003718 261.0
BYD3_k127_8420819_14 protein conserved in bacteria K09797 - - 0.000000000000000000000000000000000000000000000000000000000000000005367 237.0
BYD3_k127_8420819_15 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000001091 200.0
BYD3_k127_8420819_16 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000002487 214.0
BYD3_k127_8420819_17 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000006 218.0
BYD3_k127_8420819_18 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000002101 179.0
BYD3_k127_8420819_19 KR domain - - - 0.0000000000000000000000000000000000000000000004101 173.0
BYD3_k127_8420819_2 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 488.0
BYD3_k127_8420819_20 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000001201 180.0
BYD3_k127_8420819_21 Cupin domain - - - 0.0000000000000000000000000000000000000000003533 162.0
BYD3_k127_8420819_22 TspO/MBR family K05770 - - 0.000000000000000000000000000000000000000002204 162.0
BYD3_k127_8420819_23 helix_turn_helix, Arsenical Resistance Operon Repressor K03892,K21903 - - 0.000000000000000000000000000000001215 135.0
BYD3_k127_8420819_24 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000000005088 125.0
BYD3_k127_8420819_25 Tetratricopeptide repeat - - - 0.0000000000000000000000000001551 121.0
BYD3_k127_8420819_26 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000196 114.0
BYD3_k127_8420819_27 Tellurite resistance protein TerB - - - 0.0000000000000000000000001625 113.0
BYD3_k127_8420819_28 Protein of unknown function (DUF541) K09807 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000005505 117.0
BYD3_k127_8420819_29 OsmC-like protein K07397 - - 0.000000000000000001146 91.0
BYD3_k127_8420819_3 Putative ATP-binding cassette K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 473.0
BYD3_k127_8420819_30 efflux transmembrane transporter activity - - - 0.000000000000001974 90.0
BYD3_k127_8420819_31 subunit of a heme lyase K02200 - - 0.000000000000005944 85.0
BYD3_k127_8420819_32 PFAM thioesterase superfamily K02614 - - 0.000000000000183 77.0
BYD3_k127_8420819_33 PFAM GDSL-like Lipase Acylhydrolase - - - 0.0000000000001878 80.0
BYD3_k127_8420819_34 - - - - 0.00000000003246 72.0
BYD3_k127_8420819_35 Cupin 2, conserved barrel domain protein K11477 - - 0.00000004834 61.0
BYD3_k127_8420819_36 Cupin 2, conserved barrel domain protein - - - 0.0000001154 60.0
BYD3_k127_8420819_37 Protein of unknown function (DUF1499) - - - 0.000001434 60.0
BYD3_k127_8420819_38 Tetratricopeptide TPR_2 repeat protein - - - 0.00001581 57.0
BYD3_k127_8420819_4 AsmA-like C-terminal region K07289 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008297 468.0
BYD3_k127_8420819_5 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 425.0
BYD3_k127_8420819_6 Hypothetical methyltransferase K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005793 399.0
BYD3_k127_8420819_7 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 396.0
BYD3_k127_8420819_8 Glucose / Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 398.0
BYD3_k127_8420819_9 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008549 333.0
BYD3_k127_8454856_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01908 - 6.2.1.17 0.0 1053.0
BYD3_k127_8454856_1 iron assimilation - - - 6.611e-209 659.0
BYD3_k127_8454856_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00383 - 1.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 603.0
BYD3_k127_8454856_3 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 307.0
BYD3_k127_8454856_4 - - - - 0.000000000000000000000000000000000000000000000000001 203.0
BYD3_k127_8455380_0 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 582.0
BYD3_k127_8455380_1 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 325.0
BYD3_k127_8455380_2 Oxidoreductase family, NAD-binding Rossmann fold K10219 - 1.1.1.312 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005003 307.0
BYD3_k127_8455380_3 TonB-dependent receptor - - - 0.00000002467 64.0
BYD3_k127_8455380_4 CarboxypepD_reg-like domain - - - 0.0007445 47.0
BYD3_k127_8508952_0 Pyridine nucleotide-disulphide oxidoreductase - - - 6.18e-237 741.0
BYD3_k127_8508952_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005616 443.0
BYD3_k127_8508952_2 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000000000000000000000001569 174.0
BYD3_k127_8508952_3 Protein of unknown function (DUF1624) - - - 0.00000000000000002695 89.0
BYD3_k127_8508952_4 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives K02343 - 2.7.7.7 0.000000000000002827 89.0
BYD3_k127_8508952_5 general secretion pathway protein - - - 0.0006033 49.0
BYD3_k127_8536188_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005032 537.0
BYD3_k127_8536188_1 electron transfer activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005374 308.0
BYD3_k127_8536188_2 electron transfer activity - - - 0.00000000000000000000007297 105.0
BYD3_k127_8536188_3 COG4335 DNA alkylation repair enzyme - - - 0.0000003248 52.0
BYD3_k127_8552159_0 Acetyltransferase (GNAT) domain K01905,K09181,K22224 - 6.2.1.13 5.719e-290 917.0
BYD3_k127_8552159_1 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 4.943e-257 809.0
BYD3_k127_8552159_10 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 488.0
BYD3_k127_8552159_11 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 429.0
BYD3_k127_8552159_12 biosynthesis protein K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 433.0
BYD3_k127_8552159_13 S-adenosylmethionine synthetase (AdoMet synthetase) K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 425.0
BYD3_k127_8552159_14 Hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 432.0
BYD3_k127_8552159_15 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 390.0
BYD3_k127_8552159_16 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 400.0
BYD3_k127_8552159_17 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 380.0
BYD3_k127_8552159_18 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000891 376.0
BYD3_k127_8552159_19 PFAM Peptidoglycan-binding domain 1 protein K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 383.0
BYD3_k127_8552159_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 3.077e-236 747.0
BYD3_k127_8552159_20 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 368.0
BYD3_k127_8552159_21 Isochorismatase family K08281 - 3.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 323.0
BYD3_k127_8552159_22 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 314.0
BYD3_k127_8552159_23 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005682 295.0
BYD3_k127_8552159_24 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001867 281.0
BYD3_k127_8552159_25 Trypsin K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000188 290.0
BYD3_k127_8552159_26 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006278 278.0
BYD3_k127_8552159_27 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000002617 248.0
BYD3_k127_8552159_28 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000429 230.0
BYD3_k127_8552159_29 Phosphoribosyl transferase domain K07100 - - 0.000000000000000000000000000000000000000000000000000000000005149 215.0
BYD3_k127_8552159_3 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions - - - 1.386e-226 714.0
BYD3_k127_8552159_30 PFAM NUDIX hydrolase - - - 0.0000000000000000000000000000000000000000000000000000264 197.0
BYD3_k127_8552159_31 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000002196 195.0
BYD3_k127_8552159_32 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000004207 188.0
BYD3_k127_8552159_33 - - - - 0.000000000000000000000000000000000000000000005738 169.0
BYD3_k127_8552159_34 Helix-hairpin-helix domain - - - 0.000000000000000000000000000000000000006112 149.0
BYD3_k127_8552159_35 OmpA family - - - 0.0000000000000000000000000000000004389 139.0
BYD3_k127_8552159_36 AAA domain - - - 0.00000000000000000000000000000002388 136.0
BYD3_k127_8552159_37 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000002953 125.0
BYD3_k127_8552159_38 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000148 123.0
BYD3_k127_8552159_39 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000000000000000000001505 134.0
BYD3_k127_8552159_4 Nicotinate phosphoribosyltransferase (NAPRTase) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005714 588.0
BYD3_k127_8552159_40 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000003198 125.0
BYD3_k127_8552159_41 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000001173 111.0
BYD3_k127_8552159_42 Universal stress protein family - - - 0.000000000000000000000182 106.0
BYD3_k127_8552159_43 BON domain - - - 0.00000000000000000003905 95.0
BYD3_k127_8552159_44 PFAM CBS domain - - - 0.000000000000000003328 94.0
BYD3_k127_8552159_45 Domain of unknown function (DUF4136) - - - 0.00000000000000001656 91.0
BYD3_k127_8552159_47 Thiamine-binding protein - - - 0.000000000000001237 81.0
BYD3_k127_8552159_48 Phosphopantetheine attachment site - - - 0.000000000000001269 82.0
BYD3_k127_8552159_49 PFAM Archease protein family (DUF101 UPF0211) - - - 0.000000000002625 74.0
BYD3_k127_8552159_5 DNA polymerase X family K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 580.0
BYD3_k127_8552159_50 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.0000000000102 70.0
BYD3_k127_8552159_51 - - - - 0.00004571 52.0
BYD3_k127_8552159_52 Domain of unknown function (DUF4174) - - - 0.0002042 49.0
BYD3_k127_8552159_6 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 539.0
BYD3_k127_8552159_7 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit K00162,K21417 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 522.0
BYD3_k127_8552159_8 Belongs to the RtcB family K14415 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 501.0
BYD3_k127_8552159_9 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007551 490.0
BYD3_k127_8572918_0 Cytochrome c554 and c-prime - - - 8.175e-215 677.0
BYD3_k127_8572918_1 KaiC K08482 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 368.0
BYD3_k127_8572918_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 350.0
BYD3_k127_8572918_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 330.0
BYD3_k127_8572918_4 cheY-homologous receiver domain - - - 0.00000000000000000000000001282 110.0
BYD3_k127_8572918_5 regulation of circadian rhythm K08482 - - 0.0000000000000000004875 101.0
BYD3_k127_8572918_6 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0002709 52.0
BYD3_k127_8572918_7 Transcriptional regulatory protein, C terminal - - - 0.0005549 53.0
BYD3_k127_8645160_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1155.0
BYD3_k127_8645160_1 - - - - 0.0 1053.0
BYD3_k127_8645160_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000706 278.0
BYD3_k127_8645160_11 Lytic transglycosylase catalytic K08307 - - 0.00000000000000000000000000000000000000000000006407 182.0
BYD3_k127_8645160_12 OsmC-like protein K06889,K07397 - - 0.0000000000000000000000000000000000000000001736 169.0
BYD3_k127_8645160_13 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.000000000000000000000000000000000000001721 151.0
BYD3_k127_8645160_14 - - - - 0.00000000000000000000000000000000007768 144.0
BYD3_k127_8645160_15 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.0000000000000000000000000000000009464 131.0
BYD3_k127_8645160_16 MEDS: MEthanogen/methylotroph, DcmR Sensory domain K17071 - - 0.00000000000000000000000000000005461 134.0
BYD3_k127_8645160_17 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000003506 120.0
BYD3_k127_8645160_18 lactoylglutathione lyase activity - - - 0.00000000000000000000008787 106.0
BYD3_k127_8645160_19 PFAM Response regulator receiver domain - - - 0.000000000000000000002008 102.0
BYD3_k127_8645160_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 617.0
BYD3_k127_8645160_20 Chorismate mutase K00210,K04092,K04093,K14187 GO:0000166,GO:0003674,GO:0003824,GO:0004106,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016853,GO:0016866,GO:0017144,GO:0019438,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0071944,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 1.3.1.12,5.4.99.5 0.0000000154 66.0
BYD3_k127_8645160_22 Tetratricopeptide repeat - - - 0.0001046 55.0
BYD3_k127_8645160_3 Ribonuclease E/G family K08301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 578.0
BYD3_k127_8645160_4 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 583.0
BYD3_k127_8645160_5 Belongs to the thiolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 487.0
BYD3_k127_8645160_6 SigmaW regulon antibacterial - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 421.0
BYD3_k127_8645160_7 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 385.0
BYD3_k127_8645160_8 mannose-ethanolamine phosphotransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 370.0
BYD3_k127_8645160_9 Membrane-bound serine protease (ClpP class) K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 331.0
BYD3_k127_8662533_0 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 460.0
BYD3_k127_8662533_1 proteinase inhibitor I4 serpin K13963 - - 0.00000000000000000000000000000000000000000000000000000001334 205.0
BYD3_k127_8662533_2 OmpA family - - - 0.00000000000000000000000000005749 130.0
BYD3_k127_8662533_3 peptidyl-tyrosine sulfation - - - 0.0007031 52.0
BYD3_k127_8799658_0 Acyl-CoA oxidase K00232 - 1.3.3.6 5.268e-213 690.0
BYD3_k127_8799658_1 tRNA synthetases class I (W and Y) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 442.0
BYD3_k127_8799658_10 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000003312 198.0
BYD3_k127_8799658_11 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000005031 194.0
BYD3_k127_8799658_12 Belongs to the metal hydrolase YfiT family - - - 0.00000000000000000000000000000000000000000000000002724 181.0
BYD3_k127_8799658_13 Protein involved in meta-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000002268 187.0
BYD3_k127_8799658_14 Dienelactone hydrolase family K06999 - - 0.000000000000000000000000000000000000000001179 176.0
BYD3_k127_8799658_15 Peptidase M50B-like - - - 0.00000000000000000000000000000000000001817 152.0
BYD3_k127_8799658_16 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000001329 147.0
BYD3_k127_8799658_17 Thioredoxin-like - - - 0.00000000000000000000000000000000005361 140.0
BYD3_k127_8799658_18 Transcription elongation factor, N-terminal K03624 - - 0.000000000000000000000000000003988 137.0
BYD3_k127_8799658_19 cheY-homologous receiver domain - - - 0.0000000000000000000002593 102.0
BYD3_k127_8799658_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008039 411.0
BYD3_k127_8799658_20 Redoxin - - - 0.000000000000000006414 87.0
BYD3_k127_8799658_21 Bacterial regulatory proteins, tetR family - - - 0.000000000006748 77.0
BYD3_k127_8799658_22 outer membrane efflux protein - - - 0.0000009461 61.0
BYD3_k127_8799658_23 Redoxin - - - 0.000002543 54.0
BYD3_k127_8799658_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 398.0
BYD3_k127_8799658_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase K15975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 396.0
BYD3_k127_8799658_5 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 372.0
BYD3_k127_8799658_6 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004683 332.0
BYD3_k127_8799658_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001312 283.0
BYD3_k127_8799658_8 Secretion protein K01993 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001468 284.0
BYD3_k127_8799658_9 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000002528 243.0
BYD3_k127_881014_0 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 543.0
BYD3_k127_881014_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000001961 207.0
BYD3_k127_881014_2 Protein of unknown function (DUF1697) - - - 0.00000000000000000000000000000000000000000000000000003016 195.0
BYD3_k127_881014_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000004243 168.0
BYD3_k127_881014_4 Iron-sulphur cluster biosynthesis - - - 0.00000000000000000000000000000000000004597 145.0
BYD3_k127_881014_5 TIGRFAM histidinol-phosphate phosphatase family protein K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000001275 94.0
BYD3_k127_881014_6 Domain of unknown function (DUF202) - - - 0.000000000006074 68.0
BYD3_k127_881014_7 Cytochrome c - - - 0.000000006478 62.0
BYD3_k127_8810344_0 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000001783 263.0
BYD3_k127_8810344_1 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000000000001399 217.0
BYD3_k127_8810344_2 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000001161 170.0
BYD3_k127_8810344_3 Ferric uptake regulator family K03711 - - 0.00000000000000000000000000000000001271 144.0
BYD3_k127_8810344_4 PHP-associated - - - 0.00000000000000000000000001578 124.0
BYD3_k127_8810344_5 - - - - 0.00000000000003378 76.0
BYD3_k127_8810344_6 MacB-like periplasmic core domain - - - 0.000001225 51.0
BYD3_k127_8845053_0 Dehydrogenase K00114 - 1.1.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 562.0
BYD3_k127_8845053_1 Peptidase dimerisation domain K13049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 497.0
BYD3_k127_8845053_10 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000155 138.0
BYD3_k127_8845053_11 - - - - 0.00000000000001111 86.0
BYD3_k127_8845053_12 Belongs to the UPF0312 family - - - 0.000000001911 69.0
BYD3_k127_8845053_13 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00002288 53.0
BYD3_k127_8845053_2 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 465.0
BYD3_k127_8845053_3 FMN-dependent dehydrogenase K00104,K16422 - 1.1.3.15,1.1.3.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 308.0
BYD3_k127_8845053_4 Ferritin-like domain K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000003465 211.0
BYD3_k127_8845053_5 LD-carboxypeptidase K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000004045 202.0
BYD3_k127_8845053_6 PFAM Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000001171 150.0
BYD3_k127_8845053_7 BlaR1 peptidase M56 - - - 0.00000000000000000000000000000000002255 152.0
BYD3_k127_8845053_8 Penicillinase repressor - - - 0.00000000000000000000000000000000005301 137.0
BYD3_k127_8845053_9 BlaR1 peptidase M56 - - - 0.0000000000000000000000000000000001306 150.0
BYD3_k127_8846055_0 LytB protein K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005055 484.0
BYD3_k127_8846055_1 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 479.0
BYD3_k127_8846055_10 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000005656 147.0
BYD3_k127_8846055_11 PFAM regulatory protein MarR K15973 - - 0.00000000000000000000000000000000005883 142.0
BYD3_k127_8846055_12 FAD binding domain K11472 - - 0.0000000000000000000000000000000001369 147.0
BYD3_k127_8846055_13 GAF domain-containing protein K08968 - 1.8.4.14 0.0000000000000000000000000008109 119.0
BYD3_k127_8846055_14 FxsA cytoplasmic membrane protein K07113 - - 0.00000000000000000000000003137 120.0
BYD3_k127_8846055_15 Yip1 domain - - - 0.000000591 61.0
BYD3_k127_8846055_16 lysine biosynthetic process via aminoadipic acid - - - 0.00061 51.0
BYD3_k127_8846055_2 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 471.0
BYD3_k127_8846055_3 PFAM peptidase M18 aminopeptidase I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 399.0
BYD3_k127_8846055_4 type II secretion system protein E K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 406.0
BYD3_k127_8846055_5 4Fe-4S binding domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 387.0
BYD3_k127_8846055_6 peptidase, M20 K01295 - 3.4.17.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 387.0
BYD3_k127_8846055_7 carboxylic acid catabolic process K02549 GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.2.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 335.0
BYD3_k127_8846055_8 Metalloenzyme superfamily - - - 0.0000000000000000000000000000000000000000000704 173.0
BYD3_k127_8846055_9 DinB superfamily K07552 - - 0.0000000000000000000000000000000000002036 146.0
BYD3_k127_8881934_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1102.0
BYD3_k127_8881934_1 PQQ-like domain K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 484.0
BYD3_k127_8881934_10 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 306.0
BYD3_k127_8881934_11 Surface antigen K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004542 278.0
BYD3_k127_8881934_12 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000001053 215.0
BYD3_k127_8881934_13 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000004218 213.0
BYD3_k127_8881934_14 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000009403 180.0
BYD3_k127_8881934_15 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01450,K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.31,3.5.1.88 0.000000000000000000000000000000000000000000003584 171.0
BYD3_k127_8881934_16 Glutathione peroxidase - - - 0.0000000000000000000000000000000000001878 148.0
BYD3_k127_8881934_17 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000001515 136.0
BYD3_k127_8881934_18 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000000001564 115.0
BYD3_k127_8881934_19 Preprotein translocase subunit K03210 - - 0.000000000000000004877 87.0
BYD3_k127_8881934_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005006 461.0
BYD3_k127_8881934_20 serine threonine protein kinase K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.0000000000004435 79.0
BYD3_k127_8881934_21 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000122 72.0
BYD3_k127_8881934_22 PFAM YbbR family protein - - - 0.000006244 57.0
BYD3_k127_8881934_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005823 395.0
BYD3_k127_8881934_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 353.0
BYD3_k127_8881934_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 362.0
BYD3_k127_8881934_6 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 317.0
BYD3_k127_8881934_7 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 307.0
BYD3_k127_8881934_8 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008505 299.0
BYD3_k127_8881934_9 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 289.0
BYD3_k127_8887746_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 311.0
BYD3_k127_8887746_1 Protein of unknown function (DUF1207) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 307.0
BYD3_k127_8887746_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003831 285.0
BYD3_k127_8887746_3 M6 family metalloprotease domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000007924 240.0
BYD3_k127_8887746_5 ORF located using - - - 0.000000000002542 77.0
BYD3_k127_8889964_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 458.0
BYD3_k127_8889964_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000013 243.0
BYD3_k127_8889964_2 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.000000000000000000000000000000000006491 141.0
BYD3_k127_8889964_3 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000001018 105.0
BYD3_k127_8896568_0 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000786 591.0
BYD3_k127_8896568_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 518.0
BYD3_k127_8896568_10 GDP-mannose mannosyl hydrolase activity K01858,K03207,K03574 - 3.6.1.55,5.5.1.4 0.0000000000000000000000000000000000008948 145.0
BYD3_k127_8896568_11 Protein of unknown function (DUF3667) - - - 0.000000000000000000000000000004121 130.0
BYD3_k127_8896568_12 - - - - 0.00000004329 63.0
BYD3_k127_8896568_13 - - - - 0.0000001146 59.0
BYD3_k127_8896568_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 486.0
BYD3_k127_8896568_3 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 351.0
BYD3_k127_8896568_4 acetylesterase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003459 282.0
BYD3_k127_8896568_5 Sodium hydrogen exchanger - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009195 285.0
BYD3_k127_8896568_6 Zinc dependent phospholipase C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004241 259.0
BYD3_k127_8896568_7 Domain of unknown function (DUF4389) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005566 246.0
BYD3_k127_8896568_8 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000004613 231.0
BYD3_k127_8896568_9 DinB family - - - 0.000000000000000000000000000000000000000000005982 169.0
BYD3_k127_8927384_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005994 478.0
BYD3_k127_8927384_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005975 412.0
BYD3_k127_8927384_2 Diguanylate cyclase, GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 306.0
BYD3_k127_8927384_3 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001365 272.0
BYD3_k127_8927384_4 - - - - 0.0000000000000000000000002253 116.0
BYD3_k127_8927384_5 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 0.000000000000000000000000396 117.0
BYD3_k127_8927384_6 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism - - - 0.000000000000000000000007104 113.0
BYD3_k127_8927384_7 - - - - 0.000000000000000000001253 103.0
BYD3_k127_8927384_8 Methyltransferase FkbM domain - - - 0.0000000000105 74.0
BYD3_k127_8927384_9 - - - - 0.000004839 50.0
BYD3_k127_8935408_0 all-trans-retinol 13,14-reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005682 593.0
BYD3_k127_8935408_1 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 353.0
BYD3_k127_8935408_2 Haem-degrading - - - 0.0000000000000000000000000000000000000000005124 162.0
BYD3_k127_8935408_3 NmrA-like family - - - 0.00000000000000000000000000002423 124.0
BYD3_k127_8935408_4 Reductase C-terminal K05297 - 1.18.1.1 0.0000000000007408 75.0
BYD3_k127_8990573_0 CoA enzyme activase uncharacterised domain (DUF2229) - - - 8.692e-249 821.0
BYD3_k127_8990573_1 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625 323.0
BYD3_k127_8990573_2 Acyl-CoA thioesterase K10805 - - 0.000000000000000000000000000000000000000000881 158.0
BYD3_k127_8990573_3 response regulator - - - 0.00001505 57.0
BYD3_k127_8990573_4 response regulator - - - 0.000023 51.0
BYD3_k127_8990573_5 Nucleotidyltransferase domain K07075 - - 0.00002743 57.0