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Overview

ID MAG00122
Name BYD3_bin.35
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Eisenbacteria
Class RBG-16-71-46
Order SZUA-252
Family SZUA-252
Genus WS-9
Species
Assembly information
Completeness (%) 59.12
Contamination (%) 0.17
GC content (%) 70.0
N50 (bp) 7,450
Genome size (bp) 1,935,533

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1712

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1013792_0 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005951 577.0
BYD3_k127_1013792_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 565.0
BYD3_k127_1013792_2 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 553.0
BYD3_k127_1013792_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 402.0
BYD3_k127_1013792_4 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000006482 208.0
BYD3_k127_1013792_5 DinB superfamily - - - 0.0000000000000000000000000000000000000000000008596 172.0
BYD3_k127_1013792_6 glyoxalase III activity - - - 0.000000000000000000000000000000000000001296 162.0
BYD3_k127_1013792_7 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000002092 127.0
BYD3_k127_1013792_8 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000002206 106.0
BYD3_k127_1013792_9 Acetyltransferase (GNAT) domain K03830 - - 0.0009424 46.0
BYD3_k127_1026893_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 546.0
BYD3_k127_1026893_1 short-chain dehydrogenase reductase SDR K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 355.0
BYD3_k127_1026893_2 TIGRFAM FemAB-related protein, PEP-CTERM system-associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003932 338.0
BYD3_k127_1026893_3 Polysaccharide biosynthesis protein K03328 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 313.0
BYD3_k127_1026893_4 Glucose / Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000006475 161.0
BYD3_k127_1026893_5 COG0489 ATPases involved in chromosome partitioning K00903 - 2.7.10.2 0.00000000000000000000000000007358 128.0
BYD3_k127_1026893_6 protein involved in exopolysaccharide biosynthesis K16554 - - 0.0000004367 61.0
BYD3_k127_1034476_0 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000002619 243.0
BYD3_k127_1034476_1 ABC transporter K09812 GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0008356,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0032506,GO:0042173,GO:0043937,GO:0043938,GO:0044085,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:1902531 - 0.00000000000000000000000000000000000000000000002613 191.0
BYD3_k127_1034476_2 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.00000000000000000000000000006576 122.0
BYD3_k127_1039761_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1198.0
BYD3_k127_1039761_1 COG2217 Cation transport ATPase K01534 - 3.6.3.3,3.6.3.5 0.0000001379 59.0
BYD3_k127_1084018_0 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 521.0
BYD3_k127_1084018_1 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001639 310.0
BYD3_k127_1084018_2 polysaccharide deacetylase - - - 0.00000000000000000000000000891 115.0
BYD3_k127_1084018_3 Phosphopantetheine attachment site - - - 0.000000000008141 72.0
BYD3_k127_1096244_0 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019534,GO:0019904,GO:0022857,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 309.0
BYD3_k127_1096244_1 PFAM OmpA MotB domain protein K03640 - - 0.000000000000000000000000000000000000001185 154.0
BYD3_k127_1096244_2 Outer membrane lipoprotein - - - 0.000000000000000000000000003404 121.0
BYD3_k127_1096244_3 TonB C terminal K03832 - - 0.0000000000005246 72.0
BYD3_k127_1103749_0 4Fe-4S binding domain - - - 3.667e-240 766.0
BYD3_k127_1103749_1 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 323.0
BYD3_k127_1103749_2 PFAM Pyridoxal-dependent decarboxylase K01593 - 4.1.1.105,4.1.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 300.0
BYD3_k127_1103749_3 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000009237 138.0
BYD3_k127_111633_0 transcription factor binding K02584,K11914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 366.0
BYD3_k127_111633_1 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000138 87.0
BYD3_k127_111633_2 Hypothetical methyltransferase - - - 0.00000001172 68.0
BYD3_k127_1356787_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.26e-241 788.0
BYD3_k127_1356787_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 466.0
BYD3_k127_1356787_2 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 385.0
BYD3_k127_1356787_3 Uncharacterized ACR, COG1993 K06199,K09137 - - 0.0000000000000000000000000000000000000000000000005215 178.0
BYD3_k127_1356787_4 Lysylphosphatidylglycerol synthase TM region - - - 0.000000000000000000000000000000000000000000001038 192.0
BYD3_k127_1356787_5 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000000000000000009719 126.0
BYD3_k127_1356787_6 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000003369 101.0
BYD3_k127_1356787_7 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000004346 102.0
BYD3_k127_1356787_8 Belongs to the UPF0109 family K06960 - - 0.000000000000000007554 85.0
BYD3_k127_1366479_0 UDP-N-acetylmuramate-alanine ligase K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007491 290.0
BYD3_k127_1366479_1 Trypsin-like serine protease K01337 - 3.4.21.50 0.0000000000000853 80.0
BYD3_k127_1366479_2 PFAM Peptidase M16 inactive domain - - - 0.0000000000002407 79.0
BYD3_k127_1366479_3 - - - - 0.00000003359 64.0
BYD3_k127_138889_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 377.0
BYD3_k127_138889_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001985 312.0
BYD3_k127_138889_2 Calcineurin-like phosphoesterase K03547 - - 0.00000000000000000000000000000000000000000000000000000000000000001791 245.0
BYD3_k127_138889_3 NUDIX domain - - - 0.000000000000000000000000000000000005742 145.0
BYD3_k127_138889_4 AAA domain - - - 0.0000000000000001229 92.0
BYD3_k127_148462_0 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 417.0
BYD3_k127_148462_1 Integrin alpha (beta-propellor repeats). - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004652 309.0
BYD3_k127_148462_2 PFAM band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004252 247.0
BYD3_k127_148462_3 Domain of unknown function (DUF4382) - - - 0.0000000000000000000000000000000000000000000005066 179.0
BYD3_k127_148462_4 ADP-ribosyl-(Dinitrogen reductase) hydrolase K05521 - 3.2.2.24 0.000000000000000000000000000000000000000002859 168.0
BYD3_k127_148462_5 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 0.00000000000000000126 102.0
BYD3_k127_148462_6 Nodulation efficiency protein D - - - 0.0000009634 57.0
BYD3_k127_1517728_0 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 473.0
BYD3_k127_1517728_1 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 370.0
BYD3_k127_1517728_2 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000003369 219.0
BYD3_k127_1517728_3 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.0000000000000000000000000000000000000000000000008798 184.0
BYD3_k127_1517728_4 Alcohol dehydrogenase GroES-like domain K07538 - 1.1.1.368 0.000000000000000000000000000000000000000000000009602 176.0
BYD3_k127_1517728_5 2-hydroxyglutaryl-CoA dehydratase, D-component K04113 - 1.3.7.8 0.00000002713 57.0
BYD3_k127_1533128_0 Belongs to the 5'-nucleotidase family K01081,K11751 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000001687 271.0
BYD3_k127_1533128_1 Subtilase family - - - 0.00000000000000009053 87.0
BYD3_k127_1535626_0 Peptidase family M1 domain K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009163 518.0
BYD3_k127_1535626_1 Predicted permease K07089 - - 0.00000000000000000000008956 111.0
BYD3_k127_1535626_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000002017 53.0
BYD3_k127_157281_0 7TM receptor with intracellular HD hydrolase K07037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 372.0
BYD3_k127_157281_1 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000001019 189.0
BYD3_k127_157281_2 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000002552 155.0
BYD3_k127_157281_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K01489,K07042 - 3.5.4.5 0.00000000000000000000002371 107.0
BYD3_k127_157281_4 Involved in DNA repair and RecF pathway recombination K03584 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000001024 106.0
BYD3_k127_1574948_0 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 614.0
BYD3_k127_1574948_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000542 215.0
BYD3_k127_1574948_2 PFAM Fibronectin type III domain - - - 0.00000000000000000000000000000004395 144.0
BYD3_k127_1574948_4 Glycosyl hydrolase family 70 K01142,K01176 - 3.1.11.2,3.2.1.1 0.000005621 59.0
BYD3_k127_1579234_0 Peptidase family M3 K01392 - 3.4.24.15 1.291e-201 664.0
BYD3_k127_1579234_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 460.0
BYD3_k127_1579234_2 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.000000000000000000000000000000000000000001315 160.0
BYD3_k127_1579234_3 PFAM AhpC TSA family - - - 0.000000000002581 72.0
BYD3_k127_1579234_4 Hemerythrin HHE cation binding domain - - - 0.0000003862 59.0
BYD3_k127_1579234_5 DNA polymerase beta - - - 0.0005459 51.0
BYD3_k127_1585144_0 lysine biosynthetic process via aminoadipic acid - - - 2.298e-230 743.0
BYD3_k127_1599040_0 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 397.0
BYD3_k127_1599040_1 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 313.0
BYD3_k127_1599040_2 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 312.0
BYD3_k127_1599040_3 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000000000001602 213.0
BYD3_k127_1599040_4 - - - - 0.0000000000000000000000000000000000000000000000000000002434 202.0
BYD3_k127_1599040_5 Octanoyltransferase K03800 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 6.3.1.20 0.0000000000000006396 88.0
BYD3_k127_1599040_6 peroxiredoxin activity K03564,K07638 - 1.11.1.15,2.7.13.3 0.000000000000429 77.0
BYD3_k127_1667954_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 290.0
BYD3_k127_1667954_1 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000002775 239.0
BYD3_k127_1667954_2 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000002715 162.0
BYD3_k127_1667954_3 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.0000000000000000000000000000001164 132.0
BYD3_k127_1667954_4 - - - - 0.000000000000000000000000008853 121.0
BYD3_k127_1667954_5 EamA-like transporter family - - - 0.000000006944 59.0
BYD3_k127_1691691_0 Involved in the tonB-independent uptake of proteins - - - 9.787e-203 660.0
BYD3_k127_1707784_0 His Kinase A (phosphoacceptor) domain K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 494.0
BYD3_k127_1707784_1 nitronate monooxygenase activity K02371 - 1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 329.0
BYD3_k127_1707784_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000008102 237.0
BYD3_k127_1707784_3 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000005826 227.0
BYD3_k127_1707784_4 YCII-related domain - - - 0.00000000000000000000000000009181 130.0
BYD3_k127_1752034_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625 524.0
BYD3_k127_1752034_1 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.000000000000000000000000000000000000000000000000001749 204.0
BYD3_k127_1770962_0 succinylglutamate desuccinylase activity K05526 - 3.5.1.96 0.000000000000000000000000000000000000000000000001706 183.0
BYD3_k127_1770962_1 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000004941 116.0
BYD3_k127_1809333_0 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000003229 253.0
BYD3_k127_1809333_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000004202 255.0
BYD3_k127_1809333_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003402 251.0
BYD3_k127_1809333_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000008252 233.0
BYD3_k127_1809333_4 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000001763 160.0
BYD3_k127_1809333_5 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.0000000000000003944 83.0
BYD3_k127_1809333_6 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000007095 70.0
BYD3_k127_1822832_0 PFAM aminotransferase, class I K00812,K10907 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007843 478.0
BYD3_k127_1822832_1 PFAM Aspartate glutamate uridylate kinase K00926 - 2.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007389 343.0
BYD3_k127_1822832_2 ABC transporter, ATP-binding protein K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000001866 192.0
BYD3_k127_1872505_0 HAD superfamily (subfamily IG) hydrolase 5'-Nucleotidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 367.0
BYD3_k127_1872505_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 299.0
BYD3_k127_1872505_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000004498 234.0
BYD3_k127_1898780_0 MutL protein K00854 - 2.7.1.17 3.355e-269 845.0
BYD3_k127_1898780_1 - - - - 0.000000000000000000009419 98.0
BYD3_k127_1898780_2 - - - - 0.000000000001469 74.0
BYD3_k127_1898780_3 - - - - 0.0000001715 53.0
BYD3_k127_1929011_0 Tricorn protease C1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004446 291.0
BYD3_k127_1929011_1 Fis Family K02584 - - 0.0000000000000000000000000000000000000000000000000003266 194.0
BYD3_k127_1929011_2 Protein of unknown function (DUF1579) - - - 0.000000000000000000000003849 112.0
BYD3_k127_1929011_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00006266 55.0
BYD3_k127_1940607_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 437.0
BYD3_k127_1940607_1 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007203 339.0
BYD3_k127_1940607_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000000000000000000000000000000000000000000000000001233 202.0
BYD3_k127_1940607_3 protein maturation K13628 - - 0.000000000000000000000000000003502 124.0
BYD3_k127_1940607_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00363,K05710 - 1.7.1.15 0.00000000000000000006579 106.0
BYD3_k127_1940607_5 Sodium hydrogen exchanger K03455 - - 0.000000000005528 68.0
BYD3_k127_1963345_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000407 246.0
BYD3_k127_1963345_1 Phosphoesterase, PA-phosphatase related protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000006172 252.0
BYD3_k127_1963345_2 Membrane - - - 0.000000001482 66.0
BYD3_k127_1979572_0 Glycoside hydrolase family 24 - - - 0.000000000000000000000000000000000000000000000000000000556 222.0
BYD3_k127_1979572_1 - - - - 0.00000000000007782 82.0
BYD3_k127_1979572_2 - - - - 0.0000000000002142 80.0
BYD3_k127_1979572_3 amine dehydrogenase activity - - - 0.00001521 57.0
BYD3_k127_2010381_0 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 373.0
BYD3_k127_2010381_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002735 281.0
BYD3_k127_2010381_2 Branched-chain amino acid transport system / permease component K01995,K01998 - - 0.000000000000000004791 88.0
BYD3_k127_2070469_0 Phosphoribulokinase / Uridine kinase family K00855,K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.19,2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000000001232 248.0
BYD3_k127_2070469_1 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 GO:0000287,GO:0003674,GO:0003824,GO:0004422,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006166,GO:0006177,GO:0006188,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032261,GO:0032263,GO:0032264,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0043094,GO:0043101,GO:0043167,GO:0043169,GO:0043173,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046040,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.8 0.00000000000000000000000000000000000000000000000000001877 196.0
BYD3_k127_2070469_2 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.000000000000000000000000000000000000000000000006333 193.0
BYD3_k127_2070469_3 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000005855 78.0
BYD3_k127_2125863_0 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 406.0
BYD3_k127_2125863_1 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000001356 204.0
BYD3_k127_2139318_0 Glycosyl transferase family group 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 412.0
BYD3_k127_2139318_1 deoxyhypusine monooxygenase activity - - - 0.00000000000000001258 95.0
BYD3_k127_2139318_2 Immune inhibitor A peptidase M6 - - - 0.000000000000001156 84.0
BYD3_k127_2139318_3 SMART Tetratricopeptide repeat - - - 0.0000000127 68.0
BYD3_k127_2139318_4 Tetratricopeptide repeat - - - 0.00000002104 63.0
BYD3_k127_2154672_0 succinate dehydrogenase K00239 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4 1.367e-213 683.0
BYD3_k127_2154672_1 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001055 271.0
BYD3_k127_2169185_0 PFAM NADH Ubiquinone plastoquinone (complex I) K12137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 518.0
BYD3_k127_2169185_1 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005992 410.0
BYD3_k127_2169185_2 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 310.0
BYD3_k127_2169185_3 converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA - - - 0.000000000000000000000000000000000000000000000000000000000000000001816 233.0
BYD3_k127_2169185_4 Helix-turn-helix domain K02806 - - 0.000000000000000000000000000000000000000000000000000000000000821 216.0
BYD3_k127_2169185_5 hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000000000000000000000007232 190.0
BYD3_k127_217874_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 556.0
BYD3_k127_217874_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 383.0
BYD3_k127_217874_10 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 - 0.000000000000000000000000000000000005925 136.0
BYD3_k127_217874_11 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000006789 136.0
BYD3_k127_217874_12 Ribosomal protein L30p/L7e K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000936 75.0
BYD3_k127_217874_13 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000001437 67.0
BYD3_k127_217874_14 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.0000001455 63.0
BYD3_k127_217874_2 Metallopeptidase family M24 K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 298.0
BYD3_k127_217874_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0000028,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006417,GO:0006446,GO:0006450,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015935,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030371,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031554,GO:0031564,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045727,GO:0045903,GO:0045947,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990145,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000001782 256.0
BYD3_k127_217874_4 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000009408 248.0
BYD3_k127_217874_5 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000009501 194.0
BYD3_k127_217874_6 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000006016 184.0
BYD3_k127_217874_7 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000001226 174.0
BYD3_k127_217874_8 Glycosyl hydrolase-like 10 - - - 0.0000000000000000000000000000000000000000000007469 184.0
BYD3_k127_217874_9 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.000000000000000000000000000000000003672 146.0
BYD3_k127_2206821_0 Belongs to the peptidase S8 family K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000009245 237.0
BYD3_k127_2224414_0 8-amino-7-oxononanoate synthase activity K00639,K00652 - 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000761 381.0
BYD3_k127_2224414_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000003811 134.0
BYD3_k127_2224414_2 growth of symbiont in host cell K07003 - - 0.0000000000001691 82.0
BYD3_k127_223448_0 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004315 486.0
BYD3_k127_223448_1 Enoyl-CoA hydratase/isomerase K01661 - 4.1.3.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007094 436.0
BYD3_k127_223448_10 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) - - - 0.0000000000000000000000000000000000000000003942 179.0
BYD3_k127_223448_11 Thioesterase-like superfamily K12073 - 3.1.2.28 0.0000000000000002055 91.0
BYD3_k127_223448_12 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.000000000004274 74.0
BYD3_k127_223448_2 Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily K01911 - 6.2.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 371.0
BYD3_k127_223448_3 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000683 286.0
BYD3_k127_223448_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001868 278.0
BYD3_k127_223448_5 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000002124 253.0
BYD3_k127_223448_6 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000003573 233.0
BYD3_k127_223448_7 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.00000000000000000000000000000000000000000000000000000000000002418 226.0
BYD3_k127_223448_8 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K15876 - - 0.00000000000000000000000000000000000000000000000000000000001961 211.0
BYD3_k127_223448_9 Isochorismate synthase K02552 - 5.4.4.2 0.000000000000000000000000000000000000000000000000000000001962 217.0
BYD3_k127_2236006_0 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005998 606.0
BYD3_k127_2236006_1 Belongs to the enoyl-CoA hydratase isomerase family K01692 GO:0003674,GO:0003824,GO:0004300,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016020,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019395,GO:0019752,GO:0030258,GO:0030312,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:0071944,GO:0072329,GO:1901575 4.2.1.17 0.0000000000003982 82.0
BYD3_k127_2259933_0 ABC transporter K02021,K06147,K06148,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005971 599.0
BYD3_k127_2259933_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009153 575.0
BYD3_k127_2259933_2 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 337.0
BYD3_k127_2259933_3 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K12972 - 1.1.1.79,1.1.1.81 0.0000000000000000000000000000000000000000000000004093 188.0
BYD3_k127_2259933_4 PFAM glycosyl transferase family 9 K02843 - - 0.0000000000000000000000000000000001452 147.0
BYD3_k127_2259933_5 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000001312 134.0
BYD3_k127_2259933_6 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000408 125.0
BYD3_k127_2259933_7 - - - - 0.0000000000000000000001723 113.0
BYD3_k127_2269119_0 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002819 277.0
BYD3_k127_2269119_1 PFAM Integral membrane protein DUF92 - GO:0005575,GO:0016020 - 0.0000000000000003346 92.0
BYD3_k127_2269119_2 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000008568 70.0
BYD3_k127_2330954_0 Methylenetetrahydrofolate reductase K00297,K00547,K00548 - 1.5.1.20,2.1.1.10,2.1.1.13 1.689e-215 687.0
BYD3_k127_2330954_1 electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009109 295.0
BYD3_k127_2330954_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008904 286.0
BYD3_k127_2330954_3 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000002605 242.0
BYD3_k127_2330954_4 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000006479 215.0
BYD3_k127_2353409_0 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 353.0
BYD3_k127_2353409_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003336 269.0
BYD3_k127_2353409_2 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000118 198.0
BYD3_k127_2353409_3 MgtC family K07507 - - 0.000000000000000000000000000000000000000000000000000007168 195.0
BYD3_k127_2353409_4 RNA signal recognition particle 4.5S RNA - - - 0.000000000000000000000000000000000000000000001014 169.0
BYD3_k127_2353409_5 nUDIX hydrolase - - - 0.00000000000000000000000000000000005165 145.0
BYD3_k127_2353409_6 - - - - 0.000000000000000000000000000000003167 137.0
BYD3_k127_2353409_7 - - - - 0.00000000000000000000000007145 111.0
BYD3_k127_2353409_8 methyltransferase activity - - - 0.000000000000000005046 91.0
BYD3_k127_2353409_9 protocatechuate 3,4-dioxygenase activity K00449 - 1.13.11.3 0.0000000000000002967 92.0
BYD3_k127_2370384_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009645 413.0
BYD3_k127_2370384_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 388.0
BYD3_k127_2370384_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 319.0
BYD3_k127_2370384_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009361,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0032991,GO:0042709,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045333,GO:0055114,GO:0071704,GO:0072350,GO:1902494 6.2.1.5,6.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000001363 246.0
BYD3_k127_2370384_4 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000003279 209.0
BYD3_k127_2370384_5 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.000000000000000000000000000000000000000000000003934 177.0
BYD3_k127_2370384_6 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000009561 153.0
BYD3_k127_2370384_7 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000001179 153.0
BYD3_k127_2370384_8 Ribosomal L32p protein family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.000000000000000000001377 96.0
BYD3_k127_2370384_9 metal-binding, possibly nucleic acid-binding protein K07040 - - 0.000000000000000001094 94.0
BYD3_k127_2412022_0 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 299.0
BYD3_k127_2412022_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000003987 274.0
BYD3_k127_2412022_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000006294 261.0
BYD3_k127_2412022_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000314 248.0
BYD3_k127_2412022_4 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0030312,GO:0032984,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000004799 221.0
BYD3_k127_2412022_5 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000368 191.0
BYD3_k127_2412022_6 phosphatidate cytidylyltransferase activity K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000002803 186.0
BYD3_k127_2412022_7 Ribosomal protein S9/S16 K02996 - - 0.00000000000000000000000000000000006087 137.0
BYD3_k127_2412022_8 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000001049 127.0
BYD3_k127_2412022_9 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00001155 48.0
BYD3_k127_2420618_0 undecaprenyl-phosphate glucose phosphotransferase activity K03606,K20997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 364.0
BYD3_k127_2420618_1 Protein conserved in bacteria K06320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001575 256.0
BYD3_k127_2420618_2 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000337 163.0
BYD3_k127_2420618_3 Glycosyl transferase, family 9 K02841,K02843,K02847,K02849,K21003 - - 0.0000000000000000000000000000000003873 152.0
BYD3_k127_2420618_4 transferase activity, transferring glycosyl groups - - - 0.000000000000001933 85.0
BYD3_k127_2442817_0 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 410.0
BYD3_k127_2442817_1 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000002294 237.0
BYD3_k127_2442817_2 DinB superfamily - - - 0.00000000000000000000000000000004039 130.0
BYD3_k127_2445630_0 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 3.94e-225 707.0
BYD3_k127_2445630_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000004953 233.0
BYD3_k127_2481987_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03694,K03695 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.0 1045.0
BYD3_k127_2481987_1 Ndr family K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000002433 223.0
BYD3_k127_2481987_2 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000000000003028 128.0
BYD3_k127_2516601_0 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 389.0
BYD3_k127_2637720_0 involved in signal transduction (via phosphorylation) involved in transcriptional regulatory mechanism and in the regulation of secondary metabolites catalytic activity ATP a protein ADP a phosphoprotein K08282 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 475.0
BYD3_k127_2637720_1 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001792 253.0
BYD3_k127_2637720_2 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009558 248.0
BYD3_k127_2637720_3 - - - - 0.00000000000000000000000000000000000000000000000004501 184.0
BYD3_k127_2637720_4 - - - - 0.000000000000000000000000000000000000000000000008743 191.0
BYD3_k127_2637720_5 TPR repeat-containing protein - - - 0.000000000000000000000000000000000002023 158.0
BYD3_k127_2637720_6 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000002861 116.0
BYD3_k127_2637720_7 amino acid K03294 - - 0.000000000003247 70.0
BYD3_k127_2637720_8 Sodium/hydrogen exchanger family K03455 - - 0.0000004229 57.0
BYD3_k127_2637720_9 - - - - 0.0005288 52.0
BYD3_k127_2653909_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009966,GO:0009967,GO:0009986,GO:0009987,GO:0010646,GO:0010647,GO:0016465,GO:0018995,GO:0020003,GO:0023051,GO:0023056,GO:0030430,GO:0032991,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0043900,GO:0043903,GO:0044183,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0051082,GO:0061077,GO:0065007,GO:0065010,GO:0101031,GO:1901222,GO:1901224,GO:1902531,GO:1902533,GO:1990220,GO:2000535 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 304.0
BYD3_k127_2653909_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000008442 224.0
BYD3_k127_2653909_2 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000002452 138.0
BYD3_k127_2653909_3 COG0457 FOG TPR repeat - - - 0.00007449 56.0
BYD3_k127_2670233_0 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 478.0
BYD3_k127_2670233_1 cystathionine gamma-synthase activity K01739,K01758,K01760,K01761 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004121,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 475.0
BYD3_k127_2670233_2 PFAM NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002295 275.0
BYD3_k127_2670233_3 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000001935 211.0
BYD3_k127_2670233_4 TPM domain K06872 - - 0.0000000000000000000000000000000000005357 147.0
BYD3_k127_2670233_5 pilus assembly protein K02662 - - 0.00000000000000000000000000003264 137.0
BYD3_k127_2670233_6 Response regulator receiver K02483,K07658,K07668 - - 0.000000000000000000000000001098 127.0
BYD3_k127_2679027_0 PFAM Peptidase family M20 M25 M40 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005773 372.0
BYD3_k127_2679027_1 Domain of unknown function(DUF2779) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006354 348.0
BYD3_k127_2679027_2 PFAM DNA photolyase, FAD-binding K01669 - 4.1.99.3 0.000000000000000000000003958 107.0
BYD3_k127_2679027_3 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.000000002059 71.0
BYD3_k127_2683498_0 FAD binding domain K00103,K00279 - 1.1.3.8,1.5.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000001176 273.0
BYD3_k127_2683498_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000006046 119.0
BYD3_k127_2683498_2 sterol carrier protein - - - 0.000000000000001483 81.0
BYD3_k127_2698531_0 involved in signal transduction (via phosphorylation) involved in transcriptional regulatory mechanism and in the regulation of secondary metabolites catalytic activity ATP a protein ADP a phosphoprotein K08282 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 518.0
BYD3_k127_2698531_1 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005026 311.0
BYD3_k127_2698531_2 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001242 259.0
BYD3_k127_2698531_3 Endonuclease Exonuclease Phosphatase - - - 0.00000000000000000000000000000000004702 147.0
BYD3_k127_2698531_4 - - - - 0.0000000000000000001213 105.0
BYD3_k127_2698531_5 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000003742 94.0
BYD3_k127_2698531_6 extracellular matrix structural constituent - - - 0.00000000005843 76.0
BYD3_k127_2698531_7 Prolyl oligopeptidase family - - - 0.00000001513 68.0
BYD3_k127_2698531_8 AAA ATPase domain - - - 0.0001589 49.0
BYD3_k127_2701706_0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 1.036e-257 814.0
BYD3_k127_2701706_1 crp fnr family K01420 - - 0.00000000000000000000000000000000000000000000005773 183.0
BYD3_k127_2701706_2 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000000000001175 153.0
BYD3_k127_2701706_3 Bacterial PH domain K08981 - - 0.00000000000000000000000000000004597 131.0
BYD3_k127_2701706_4 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K05516 - - 0.0000000000000000000000000008578 131.0
BYD3_k127_2701706_5 Sigma-70, region 4 K03088 - - 0.00006785 48.0
BYD3_k127_2749388_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 541.0
BYD3_k127_2749388_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 312.0
BYD3_k127_2749388_2 Putative single-stranded nucleic acids-binding domain K06346 - - 0.00000000000000002596 89.0
BYD3_k127_2759147_0 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000001457 246.0
BYD3_k127_2759147_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000003987 153.0
BYD3_k127_2759147_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000008381 120.0
BYD3_k127_2759147_3 Tetratricopeptide repeat - - - 0.000000006922 65.0
BYD3_k127_2759147_4 Domain of unknown function (DUF4837) - - - 0.000001555 59.0
BYD3_k127_2759147_5 Anti-sigma-K factor rskA - - - 0.000007799 58.0
BYD3_k127_2759147_6 COG3063 Tfp pilus assembly protein PilF K02656 - - 0.0001492 49.0
BYD3_k127_2774802_0 Peptidase family M1 domain K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000009182 190.0
BYD3_k127_2774802_1 'oxidoreductase K15977 - - 0.00000000000000000000000000007953 121.0
BYD3_k127_2774802_2 GrpB protein - - - 0.00000000001849 72.0
BYD3_k127_2785277_0 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 300.0
BYD3_k127_2785277_1 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000008452 181.0
BYD3_k127_2785277_2 mechanosensitive ion channel activity K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.00000000000000000000000000000000000000000000002629 174.0
BYD3_k127_2785277_3 Thrombospondin type 3 repeat - - - 0.00000000000000000000000000000000000000153 159.0
BYD3_k127_2785277_4 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000376 123.0
BYD3_k127_2785277_5 Protein of unknown function, DUF481 K07283 - - 0.00000000001473 74.0
BYD3_k127_2845985_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 489.0
BYD3_k127_2845985_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 309.0
BYD3_k127_2845985_2 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008537 304.0
BYD3_k127_2845985_3 GAF domain - - - 0.00000000000000000000000000000000000000000000000000001708 204.0
BYD3_k127_2845985_4 Belongs to the TrpC family K01609 GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004425,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043167,GO:0043169,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046219,GO:0046391,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0071944,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48 0.00000000000000000000000000000000000000000000000000007164 196.0
BYD3_k127_2845985_5 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000004011 160.0
BYD3_k127_2845985_6 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000001009 132.0
BYD3_k127_2845985_7 - - - - 0.0000000000000000000009341 108.0
BYD3_k127_2845985_8 Dolichol kinase K18678 GO:0003674,GO:0003824,GO:0006066,GO:0006629,GO:0006720,GO:0006721,GO:0006766,GO:0006775,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009987,GO:0010189,GO:0010276,GO:0016101,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017144,GO:0018130,GO:0033306,GO:0034308,GO:0042360,GO:0042362,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1903173 2.7.1.182 0.000000000003419 75.0
BYD3_k127_2855477_0 Glycosyl transferase, family 2 K21349 - 2.4.1.268 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 481.0
BYD3_k127_2855477_1 transferase activity, transferring glycosyl groups K13693 - 2.4.1.266 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 462.0
BYD3_k127_2855477_10 PFAM Binding-protein-dependent transport system inner membrane component K02025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006556 278.0
BYD3_k127_2855477_11 Secondary thiamine-phosphate synthase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000003861 233.0
BYD3_k127_2855477_12 PFAM Binding-protein-dependent transport system inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000001893 238.0
BYD3_k127_2855477_13 haloacid dehalogenase-like hydrolase K07026 - 3.1.3.70 0.0000000000000000000000000000000000000000000000002519 196.0
BYD3_k127_2855477_14 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 - - 0.00000000000000000000000000000007751 134.0
BYD3_k127_2855477_15 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000002949 114.0
BYD3_k127_2855477_16 - - - - 0.00000000000000000000000004409 109.0
BYD3_k127_2855477_17 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.000000000000000000000003695 111.0
BYD3_k127_2855477_18 transmembrane transport - - - 0.00000000000000000000000506 118.0
BYD3_k127_2855477_19 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000005852 81.0
BYD3_k127_2855477_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 445.0
BYD3_k127_2855477_20 Bacterial regulatory proteins, tetR family - - - 0.00000000005437 71.0
BYD3_k127_2855477_3 Bacterial extracellular solute-binding protein K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 395.0
BYD3_k127_2855477_4 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006147 379.0
BYD3_k127_2855477_5 ABC transporter K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 310.0
BYD3_k127_2855477_6 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000216 299.0
BYD3_k127_2855477_7 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003821 288.0
BYD3_k127_2855477_8 MOFRL family K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000002764 280.0
BYD3_k127_2855477_9 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005257 275.0
BYD3_k127_2900776_0 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009893 402.0
BYD3_k127_2900776_1 ATP:ADP antiporter activity K01932,K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005993 386.0
BYD3_k127_2900776_2 Trypsin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 348.0
BYD3_k127_2900776_3 ABC transporter K06158 - - 0.000000000000000000000000000000000000000000000000000002241 202.0
BYD3_k127_2900776_4 Integrin alpha (beta-propellor repeats). - - - 0.0000000000000000000000000005747 128.0
BYD3_k127_2900776_5 polysaccharide catabolic process K01179 - 3.2.1.4 0.00000002703 66.0
BYD3_k127_2904917_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1178.0
BYD3_k127_2904917_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 599.0
BYD3_k127_2904917_2 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 572.0
BYD3_k127_2904917_3 gluconolactonase activity K01406,K14274,K20276,K21449 - 3.4.24.40 0.000000000000000000000000000000000000000000000000000000003832 227.0
BYD3_k127_2904917_4 Immune inhibitor A peptidase M6 - - - 0.0000000000000000000000000000000000000000008843 181.0
BYD3_k127_2904917_5 soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009274,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000004883 132.0
BYD3_k127_2904917_6 dolichyl monophosphate biosynthetic process K08591 - 2.3.1.15 0.0000000000000000000000001984 113.0
BYD3_k127_2904917_7 LVIVD repeat K01179 - 3.2.1.4 0.000000000000000002375 101.0
BYD3_k127_2930170_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.092e-202 642.0
BYD3_k127_2930170_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000347 273.0
BYD3_k127_2930170_2 ZIP Zinc transporter K07238 - - 0.000000000000000000000000000000000000000000000000002846 183.0
BYD3_k127_2930170_3 HD domain - - - 0.000000000000000000000000000000000000000006522 178.0
BYD3_k127_2930170_4 Sigma-70 region 2 K03088 - - 0.00000000088 67.0
BYD3_k127_2930170_5 chemotaxis protein K03406 - - 0.0000009516 62.0
BYD3_k127_2930170_6 response regulator receiver K03407 - 2.7.13.3 0.0000037 59.0
BYD3_k127_2930170_7 PFAM CheW domain protein K03408 - - 0.0004353 51.0
BYD3_k127_2940472_0 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 438.0
BYD3_k127_2940472_1 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 348.0
BYD3_k127_2940472_2 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001495 286.0
BYD3_k127_2940472_3 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000004733 238.0
BYD3_k127_2940472_4 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000002826 103.0
BYD3_k127_2940472_5 C4-type zinc ribbon domain K07164 - - 0.0000004031 58.0
BYD3_k127_2940472_6 membrane - - - 0.00000381 60.0
BYD3_k127_2940472_7 Tetratricopeptide TPR_2 repeat protein - - - 0.0000268 53.0
BYD3_k127_2954266_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.024e-198 647.0
BYD3_k127_2954266_1 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 467.0
BYD3_k127_2954266_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000001407 256.0
BYD3_k127_2954266_3 Adenosine specific kinase K09129 - - 0.0000000000000000000000000000000000000000000000000000353 191.0
BYD3_k127_2954266_4 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000002734 158.0
BYD3_k127_2954266_5 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000003501 166.0
BYD3_k127_2955737_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009572 304.0
BYD3_k127_2955737_1 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000001144 256.0
BYD3_k127_2955737_2 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000002125 194.0
BYD3_k127_2955737_3 PFAM UbiA prenyltransferase - - - 0.000000000000000000000000000000000000000000001438 184.0
BYD3_k127_2964874_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.249e-249 794.0
BYD3_k127_2964874_1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 561.0
BYD3_k127_2964874_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 502.0
BYD3_k127_2964874_3 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 502.0
BYD3_k127_2964874_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008973 477.0
BYD3_k127_2964874_5 Putative esterase K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000504 452.0
BYD3_k127_2964874_6 Belongs to the D-alanine--D-alanine ligase family - - - 0.000000000000000000000000000000000000000000000000000000000007547 214.0
BYD3_k127_2964874_7 Belongs to the peptidase S51 family - - - 0.00000000000000000000000000000000000000000000001266 183.0
BYD3_k127_3022990_0 Surface antigen K07277 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003544 452.0
BYD3_k127_3022990_1 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity K02372,K02535,K13599,K16363 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0019171 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 415.0
BYD3_k127_3022990_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 340.0
BYD3_k127_3022990_3 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 294.0
BYD3_k127_3022990_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000003552 243.0
BYD3_k127_3022990_5 membrane K06142 - - 0.0000002692 60.0
BYD3_k127_3022990_6 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00001972 57.0
BYD3_k127_3027696_0 C-terminal domain of 1-Cys peroxiredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 394.0
BYD3_k127_3027696_1 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 388.0
BYD3_k127_3027696_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000001415 199.0
BYD3_k127_3027696_3 Sigma-70, region 4 - - - 0.0006044 48.0
BYD3_k127_3078988_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0040007,GO:0044424,GO:0044464,GO:0055114 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000096 454.0
BYD3_k127_3078988_1 Belongs to the thiolase family K00626,K07508 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 449.0
BYD3_k127_3078988_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 462.0
BYD3_k127_3078988_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005126 410.0
BYD3_k127_3078988_4 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 364.0
BYD3_k127_3078988_5 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 298.0
BYD3_k127_3078988_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003553 269.0
BYD3_k127_3078988_7 cellulase activity K20276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001132 276.0
BYD3_k127_3078988_8 TonB dependent receptor K02014,K16092 - - 0.000000000000000000000000000000000000000000000000001779 206.0
BYD3_k127_3081320_0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 9.897e-208 662.0
BYD3_k127_3081320_1 Acetokinase family K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000723 213.0
BYD3_k127_3090368_0 tRNA synthetases class I (W and Y) K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003299 408.0
BYD3_k127_3090368_1 metallopeptidase activity K06402 - - 0.000000000000000000000000000000000000000000000000000004735 197.0
BYD3_k127_3090368_2 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.000000000000000000000000000000000000000000000008061 182.0
BYD3_k127_3090368_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000001085 181.0
BYD3_k127_3090368_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000001373 166.0
BYD3_k127_3090368_5 Peptidase family M16 - - - 0.000000000000008026 84.0
BYD3_k127_3109697_0 SAICAR synthetase K01923,K13713 - 6.3.2.6,6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004475 351.0
BYD3_k127_3109697_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 324.0
BYD3_k127_3109697_2 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000000000000000179 222.0
BYD3_k127_3109697_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000001039 156.0
BYD3_k127_3130510_0 PFAM Uncharacterised protein family UPF0027 K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 461.0
BYD3_k127_3130510_1 cAMP biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007844 362.0
BYD3_k127_3130510_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000002385 209.0
BYD3_k127_3130510_3 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.000000000000000000000000000000000000000007452 166.0
BYD3_k127_3130510_4 PFAM Methyltransferase domain - - - 0.000000000000002506 85.0
BYD3_k127_3130510_5 Universal stress protein - - - 0.0000000000001505 78.0
BYD3_k127_3181868_0 ABC-type transport system involved in cytochrome c biogenesis, permease component K02195 - - 0.000000000000000000000000000000000000005654 155.0
BYD3_k127_3181868_1 COG1131 ABC-type multidrug transport system, ATPase component K02193 - 3.6.3.41 0.00000000000000000000000003857 111.0
BYD3_k127_3181868_2 ABC-type transport system involved in cytochrome c biogenesis permease component K02194 - - 0.00000000000000001887 94.0
BYD3_k127_323163_0 Fumarase C C-terminus K01744 - 4.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 518.0
BYD3_k127_323163_1 e3 binding domain K00658,K09699 GO:0003674,GO:0003824,GO:0004149,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008289,GO:0009060,GO:0009987,GO:0015980,GO:0016417,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016751,GO:0016999,GO:0017144,GO:0019752,GO:0031405,GO:0031406,GO:0032991,GO:0033293,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045333,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:0140096,GO:1901363,GO:1901681,GO:1902494,GO:1990204,GO:1990234 2.3.1.168,2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 431.0
BYD3_k127_323163_2 Transketolase, pyrimidine binding domain K00162,K00167,K21417 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944,GO:0140030,GO:0140032 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 424.0
BYD3_k127_323163_3 Dehydrogenase E1 component K00161,K00166,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006942 316.0
BYD3_k127_323163_4 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000004566 209.0
BYD3_k127_323163_5 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000003971 165.0
BYD3_k127_323163_6 cAMP biosynthetic process - - - 0.0000000000000001988 83.0
BYD3_k127_3278262_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007774 548.0
BYD3_k127_3278262_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 538.0
BYD3_k127_3278262_2 ATPase associated with various cellular K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 401.0
BYD3_k127_3278262_3 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 392.0
BYD3_k127_3278262_4 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009895 382.0
BYD3_k127_3278262_5 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000943 321.0
BYD3_k127_3278262_6 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003118 261.0
BYD3_k127_3278262_7 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000002455 169.0
BYD3_k127_3278262_8 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104,K01808,K07566,K20201 - 2.7.7.87,3.1.3.48,3.9.1.2,5.3.1.6 0.0000000000000000000001663 103.0
BYD3_k127_3278262_9 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000004326 95.0
BYD3_k127_328259_0 TIGRFAM Carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005437 456.0
BYD3_k127_328259_1 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000005289 214.0
BYD3_k127_328259_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000002357 166.0
BYD3_k127_328259_3 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.0000000000000000000001381 97.0
BYD3_k127_328259_4 Carbamoyl-phosphate synthase K01955 - 6.3.5.5 0.00000001288 66.0
BYD3_k127_3285109_0 DNA helicase K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 577.0
BYD3_k127_3285109_1 methyltransferase K09846 - 2.1.1.210 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 458.0
BYD3_k127_3285109_2 peptidase activity, acting on L-amino acid peptides K07004,K09955 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008361 436.0
BYD3_k127_3285109_3 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 314.0
BYD3_k127_3285109_4 Predicted membrane protein (DUF2231) - - - 0.00000000000000000000000000000000000000000000001026 180.0
BYD3_k127_3285109_5 DinB superfamily - - - 0.0000000000000000000000432 109.0
BYD3_k127_3285109_6 Domain of unknown function (DUF4332) - - - 0.000000000122 72.0
BYD3_k127_3319864_0 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 394.0
BYD3_k127_3319864_1 ABC transporter, ATP-binding protein K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001103 260.0
BYD3_k127_3319864_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000002809 256.0
BYD3_k127_3319864_3 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000834 217.0
BYD3_k127_3319864_4 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000002889 176.0
BYD3_k127_3319864_5 Esterase-like activity of phytase - - - 0.000000000000000000000000002548 125.0
BYD3_k127_3319864_7 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000002736 110.0
BYD3_k127_3319864_8 Doxx family - - - 0.00006244 55.0
BYD3_k127_3345353_0 response regulator K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 421.0
BYD3_k127_3345353_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008424 310.0
BYD3_k127_3345353_2 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000468 215.0
BYD3_k127_3345353_3 Histidine kinase K13598 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000001775 208.0
BYD3_k127_3345353_4 surface antigen - - - 0.00000000000000000001121 106.0
BYD3_k127_3345353_5 Tetratricopeptide TPR_2 repeat protein - - - 0.000000004393 68.0
BYD3_k127_3345353_6 Polymer-forming cytoskeletal - - - 0.00000002414 66.0
BYD3_k127_3345353_7 Domain of unknown function (DUF4390) - - - 0.000009761 55.0
BYD3_k127_3367603_0 Malate synthase K01638 - 2.3.3.9 6.403e-226 710.0
BYD3_k127_3367603_1 Phosphoenolpyruvate phosphomutase K01637 - 4.1.3.1 4.191e-201 639.0
BYD3_k127_3367603_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 471.0
BYD3_k127_3367603_3 IrrE N-terminal-like domain K07110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 457.0
BYD3_k127_3367603_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 435.0
BYD3_k127_3367603_5 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001445 265.0
BYD3_k127_3367603_6 PFAM Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000003332 232.0
BYD3_k127_3367603_7 converts alpha-aldose to the beta-anomer - - - 0.000000000000000000000000000000000000004929 158.0
BYD3_k127_3367603_8 Acid phosphatase homologues - - - 0.00000000000003672 83.0
BYD3_k127_3367603_9 protein targeting K03070,K07039 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.000000000001617 70.0
BYD3_k127_3369028_0 malic protein domain protein K00027 - 1.1.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 497.0
BYD3_k127_3369028_1 Short-chain dehydrogenase reductase sdr - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002247 252.0
BYD3_k127_3369028_2 stress-induced mitochondrial fusion - - - 0.0000000000000000000000000000000000000000000000000000003839 214.0
BYD3_k127_3369028_3 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000000001423 198.0
BYD3_k127_3369028_4 Putative adhesin - - - 0.0000000000000000000000000000000000000000000000001608 187.0
BYD3_k127_3369028_5 Putative adhesin - - - 0.00000000000000000001545 105.0
BYD3_k127_3369028_6 - - - - 0.0000000000000338 81.0
BYD3_k127_3391807_0 adenosine deaminase K01488 - 3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 378.0
BYD3_k127_3391807_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000009152 178.0
BYD3_k127_3391807_2 Bacillithiol biosynthesis BshC K22136 - - 0.0000000000000000000000000000000000000003536 158.0
BYD3_k127_3391807_3 Dimerisation domain - - - 0.00000000000000000000000002016 126.0
BYD3_k127_3391807_4 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.000000000000004601 78.0
BYD3_k127_3401739_0 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001171 268.0
BYD3_k127_3401739_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000002351 234.0
BYD3_k127_3401739_2 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000005503 239.0
BYD3_k127_3401739_3 Glycosyltransferase family 9 (heptosyltransferase) K02841,K02843,K02849 - - 0.000000000000000000000000000000000000000000000002179 188.0
BYD3_k127_3401739_4 Surface antigen K07277 - - 0.000000000000000000000000000000000000000000000002539 196.0
BYD3_k127_3401739_5 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000007527 162.0
BYD3_k127_3401739_6 Surface antigen K07277,K09800 - - 0.00000000003896 78.0
BYD3_k127_3401739_7 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 0.00004167 49.0
BYD3_k127_3426331_0 GTP-binding protein TypA K06207 - - 1.414e-205 655.0
BYD3_k127_3426331_1 DnaJ molecular chaperone homology domain K05516 - - 0.00000000000000000000000000000000000000000000000000000003421 204.0
BYD3_k127_3426331_2 - - - - 0.0001119 52.0
BYD3_k127_3426331_3 MerR HTH family regulatory protein K18997 - - 0.0001969 49.0
BYD3_k127_3439752_0 ATP-dependent DNA helicase K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 483.0
BYD3_k127_3439752_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002796 284.0
BYD3_k127_3439752_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000004271 81.0
BYD3_k127_3480419_0 TIGRFAM Hydrolase, ortholog 1, exosortase system type 1 associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001892 269.0
BYD3_k127_3480419_1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002391 262.0
BYD3_k127_3480419_2 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002442 273.0
BYD3_k127_3480419_3 Conserved hypothetical protein 698 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001016 261.0
BYD3_k127_3488960_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 367.0
BYD3_k127_3488960_1 Phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 347.0
BYD3_k127_3488960_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0000049,GO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032268,GO:0032270,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043254,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045727,GO:0045948,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065003,GO:0065007,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901193,GO:1901195,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:1904688,GO:1904690,GO:1990856,GO:1990904,GO:2000112,GO:2000765,GO:2000767 - 0.00000000000000000000000000000000000000000000000000000005045 203.0
BYD3_k127_3488960_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000005323 137.0
BYD3_k127_3488960_4 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0000000000000000001697 89.0
BYD3_k127_3488960_5 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000007114 78.0
BYD3_k127_3516461_0 PFAM Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005631 571.0
BYD3_k127_3516461_1 glyoxalase bleomycin resistance protein dioxygenase K15975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008228 412.0
BYD3_k127_3516461_2 STAS domain K17763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 338.0
BYD3_k127_3516461_3 Stage II sporulation protein E - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002687 265.0
BYD3_k127_3516461_4 Phospholipase/Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000000000000000000000006069 229.0
BYD3_k127_3516461_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K17752 - 2.7.11.1 0.000000000000000000000000000000000000000000000000004574 184.0
BYD3_k127_3516461_6 creatininase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000001034 188.0
BYD3_k127_3516461_7 Integrin alpha (beta-propellor repeats). - - - 0.0000000000000000000000000000000000000000000006851 187.0
BYD3_k127_3516461_8 STAS domain K17762 - - 0.0000000000000000000000000000000000000000001271 169.0
BYD3_k127_3563573_0 Myo-inositol-1-phosphate synthase K01858 GO:0003674,GO:0003824,GO:0004512,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009405,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016853,GO:0016872,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044272,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 615.0
BYD3_k127_3563573_1 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005437 335.0
BYD3_k127_3563573_10 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K00999 GO:0003674,GO:0003824,GO:0003881,GO:0003882,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0030312,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.11,2.7.8.5 0.00000000000000000000000000003199 134.0
BYD3_k127_3563573_11 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530,K05788 - - 0.00000000000000000000000000003246 119.0
BYD3_k127_3563573_12 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16784,K16786,K16787 - - 0.00000000000000000000000002987 125.0
BYD3_k127_3563573_2 Threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 299.0
BYD3_k127_3563573_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 301.0
BYD3_k127_3563573_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000224 252.0
BYD3_k127_3563573_5 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000005724 256.0
BYD3_k127_3563573_6 AIR carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000058 243.0
BYD3_k127_3563573_7 Putative neutral zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000000000000000000000000000000000003065 234.0
BYD3_k127_3563573_8 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000004509 200.0
BYD3_k127_3563573_9 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000003048 158.0
BYD3_k127_3608041_0 Trypsin K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000002017 276.0
BYD3_k127_3608041_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000007083 187.0
BYD3_k127_3624199_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 561.0
BYD3_k127_3624199_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 422.0
BYD3_k127_3624199_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000002679 220.0
BYD3_k127_3624199_3 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000002395 164.0
BYD3_k127_3627789_0 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) K02626 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000004331 254.0
BYD3_k127_3627789_1 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000000000000004921 209.0
BYD3_k127_3627789_2 8-oxoguanine DNA glycosylase domain protein K03660 - 4.2.99.18 0.000000000000000000000000000000000000000002032 168.0
BYD3_k127_3627789_3 Guanylyl transferase CofC like K09931 - - 0.00000000000000000000000000000002233 143.0
BYD3_k127_3627789_4 Tetratricopeptide repeat - - - 0.00000000000000000038 96.0
BYD3_k127_3627789_5 YbbR-like protein - - - 0.0000000000001516 81.0
BYD3_k127_3627789_6 peptidylprolyl isomerase K03769 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.0002615 53.0
BYD3_k127_3635899_0 GH3 auxin-responsive promoter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 363.0
BYD3_k127_3635899_1 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000009154 226.0
BYD3_k127_3635899_2 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000007312 209.0
BYD3_k127_3635899_3 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000006934 190.0
BYD3_k127_3635899_4 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000008367 200.0
BYD3_k127_3635899_5 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000003279 168.0
BYD3_k127_3635899_7 Glycosyltransferase like family 2 K13002 - - 0.00009212 50.0
BYD3_k127_3636355_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009995 250.0
BYD3_k127_3636355_1 ABC-type transport system involved in multi-copper enzyme maturation, permease component - - - 0.000000000000001002 89.0
BYD3_k127_3650904_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 443.0
BYD3_k127_3650904_1 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000004156 233.0
BYD3_k127_3650904_2 DinB family - - - 0.000000000000000000000000000000000000000000882 162.0
BYD3_k127_3650904_3 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000004677 109.0
BYD3_k127_3660269_0 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 309.0
BYD3_k127_3660269_1 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000003815 221.0
BYD3_k127_3660269_2 ABC-2 family transporter protein - - - 0.0000000000000000000000000000000000000000000000000000123 209.0
BYD3_k127_3660269_3 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000009375 180.0
BYD3_k127_3660269_4 - - - - 0.00000000000000000000000000000000000000000000929 168.0
BYD3_k127_3660269_5 DNA polymerase X family K02347 - - 0.00000000000000000000000000000000000000000005566 168.0
BYD3_k127_3660269_6 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000004305 161.0
BYD3_k127_3660269_7 AntiSigma factor - - - 0.000000000000000000000000000001416 134.0
BYD3_k127_3660446_0 - - - - 0.000000000000000000000000000001316 129.0
BYD3_k127_3660446_1 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000526 129.0
BYD3_k127_3660446_2 BlaR1 peptidase M56 - - - 0.000000001279 67.0
BYD3_k127_3660600_0 - - - - 0.00000000000004108 79.0
BYD3_k127_3660600_1 DinB family - - - 0.0000000366 63.0
BYD3_k127_3660600_2 CoA binding domain K06929 - - 0.00005104 51.0
BYD3_k127_3685556_0 COGs COG0674 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase alpha subunit K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 379.0
BYD3_k127_3685556_1 Fe-S cluster K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009639 276.0
BYD3_k127_3685556_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000003559 93.0
BYD3_k127_3701893_0 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 314.0
BYD3_k127_3701893_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.00000000000000000000000000000000000000000000000000000000000000005296 227.0
BYD3_k127_3701893_2 Thioredoxin-like - - - 0.00000000000000000000000009123 120.0
BYD3_k127_3701893_3 AraC-like ligand binding domain - - - 0.0000000000000002071 81.0
BYD3_k127_3716894_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043,K13797 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 2.762e-262 822.0
BYD3_k127_3718891_0 Glycosyl transferases group 1 K00754 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 419.0
BYD3_k127_3718891_1 Bacillithiol biosynthesis BshC K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000001386 237.0
BYD3_k127_3718891_2 Carboxypeptidase regulatory-like domain K01365,K02030,K14475 - 3.4.22.15 0.0000205 56.0
BYD3_k127_3736617_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 517.0
BYD3_k127_3736617_1 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 327.0
BYD3_k127_3736617_2 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002253 252.0
BYD3_k127_3736617_3 PFAM Alcohol dehydrogenase - - - 0.0001992 53.0
BYD3_k127_3748149_0 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 304.0
BYD3_k127_3748149_1 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005618 303.0
BYD3_k127_3748149_2 glutamate--cysteine ligase - - - 0.000000000000000000000000000000000000000000000000000002112 206.0
BYD3_k127_37638_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298,K02827,K15408 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009486,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015453,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0016679,GO:0016682,GO:0017144,GO:0019637,GO:0019646,GO:0019693,GO:0020037,GO:0022804,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0034641,GO:0040007,GO:0042773,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0048038,GO:0048039,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901360,GO:1901363,GO:1901564,GO:1902494,GO:1902600 1.10.3.10,1.10.3.12,1.9.3.1 2.107e-210 667.0
BYD3_k127_37638_1 homoserine dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 554.0
BYD3_k127_37638_2 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004909 463.0
BYD3_k127_37638_3 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 315.0
BYD3_k127_37638_4 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008556 295.0
BYD3_k127_37638_5 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000002169 254.0
BYD3_k127_37638_6 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0040007,GO:0042773,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0051704,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000007605 250.0
BYD3_k127_37638_7 cytochrome oxidase assembly K02259 - - 0.0000000000000000000000001395 119.0
BYD3_k127_37638_8 Cytochrome c oxidase assembly protein CtaG/Cox11 K02258 - - 0.00000000000000000000482 107.0
BYD3_k127_3765795_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006025 589.0
BYD3_k127_3765795_1 cation transport ATPase K01537 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 515.0
BYD3_k127_3765795_2 thiolester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000000002275 232.0
BYD3_k127_3765795_3 Ferrous iron transport protein B K04759 - - 0.0000000000000000000000000000000000000000000000000008385 196.0
BYD3_k127_3765795_4 - - - - 0.0000000000000000000000000000000000000000000000004415 182.0
BYD3_k127_3765795_5 PFAM Iron dependent repressor, metal binding and dimerisation domain - - - 0.00000000000000003141 89.0
BYD3_k127_3765795_7 FeoA domain K04758 - - 0.000000001023 69.0
BYD3_k127_3777293_0 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006358 293.0
BYD3_k127_3777293_1 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K03790 - 2.3.1.128 0.000000000000000000000000000000000000000000000003186 181.0
BYD3_k127_3777293_2 DinB family - - - 0.00000000000000000000000000000000000000001145 167.0
BYD3_k127_3777293_3 - - - - 0.0000000000000000000000000000000000002775 149.0
BYD3_k127_3777293_4 - - - - 0.0000000000000000003601 96.0
BYD3_k127_3777293_5 Domain of unknown function (DUF4345) - - - 0.000000000000003802 89.0
BYD3_k127_3777293_6 Alpha beta hydrolase K00433 - 1.11.1.10 0.000001438 50.0
BYD3_k127_3784551_0 UvrD/REP helicase N-terminal domain K03657,K07465 - 3.6.4.12 2.774e-208 683.0
BYD3_k127_3784551_1 Short chain fatty acid transporter K02106 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 467.0
BYD3_k127_3784551_2 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004313 294.0
BYD3_k127_382273_0 involved in signal transduction (via phosphorylation) involved in transcriptional regulatory mechanism and in the regulation of secondary metabolites catalytic activity ATP a protein ADP a phosphoprotein K08282 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 479.0
BYD3_k127_382273_1 two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 428.0
BYD3_k127_382273_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K19837 - 3.5.1.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008874 439.0
BYD3_k127_382273_3 Ferritin-like domain K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000001546 216.0
BYD3_k127_382273_4 Histidine kinase K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000001038 232.0
BYD3_k127_3835692_0 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000006338 177.0
BYD3_k127_3835692_1 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000005274 141.0
BYD3_k127_3835692_2 Polysaccharide deacetylase - - - 0.00000000000000000000000000003595 136.0
BYD3_k127_3835692_3 Universal stress protein family K07090 - - 0.0000000000000001297 81.0
BYD3_k127_3835692_4 Phosphate acyltransferases - - - 0.00000000000001818 87.0
BYD3_k127_3882176_0 CHAD domain containing protein - - - 0.00000000000000000000000000000000000000000000000000565 205.0
BYD3_k127_3882176_1 phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000000000000000001039 122.0
BYD3_k127_3882176_2 - - - - 0.0000000000001942 78.0
BYD3_k127_3882176_3 - - - - 0.0002096 54.0
BYD3_k127_3914354_0 maltose binding K02027,K17329 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 317.0
BYD3_k127_3914354_1 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009541 318.0
BYD3_k127_3914354_2 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000003705 247.0
BYD3_k127_3914354_3 PFAM binding-protein-dependent transport systems inner membrane component K02025,K17242 - - 0.0000000000000000000000000000000000000000000000000000000000192 220.0
BYD3_k127_3914354_4 Binding-protein-dependent transport system inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000003176 190.0
BYD3_k127_3914354_5 Peptidase family C25 - - - 0.000000000000000001702 101.0
BYD3_k127_3917646_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003871,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0030312,GO:0032259,GO:0034641,GO:0035999,GO:0036211,GO:0040007,GO:0042084,GO:0042085,GO:0042558,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0050667,GO:0051186,GO:0071704,GO:0071944,GO:0140096,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004819 415.0
BYD3_k127_3917646_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 388.0
BYD3_k127_3917646_2 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 342.0
BYD3_k127_3917646_3 Multidrug transporter K08161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 300.0
BYD3_k127_3917646_4 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001025 287.0
BYD3_k127_3917646_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000003368 249.0
BYD3_k127_3917646_6 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000001479 207.0
BYD3_k127_3917646_7 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000002526 111.0
BYD3_k127_3917646_8 efflux transmembrane transporter activity K02004 - - 0.00000000000000006976 83.0
BYD3_k127_3917646_9 Involved in initiation control of chromosome replication K07484 - - 0.00000005169 63.0
BYD3_k127_3949749_0 His Kinase A (phosphoacceptor) domain - - - 4.428e-224 716.0
BYD3_k127_3949749_1 Domain of unknown function (DUF4188) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004575 243.0
BYD3_k127_3958863_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 330.0
BYD3_k127_3958863_1 Protein of unknown function (DUF1211) - - - 0.000000000000000000000000232 122.0
BYD3_k127_3958863_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.0000000000000000000001099 101.0
BYD3_k127_3958863_3 Protein of unknown function (DUF2905) - - - 0.000000000000002053 80.0
BYD3_k127_3961409_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006114 344.0
BYD3_k127_3961409_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000003554 269.0
BYD3_k127_3961409_2 Belongs to the UPF0173 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000107 251.0
BYD3_k127_3961409_3 peptidase - - - 0.00000000000000000000000000000000000000000000000005055 198.0
BYD3_k127_3961409_4 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000001313 152.0
BYD3_k127_3961409_5 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.0000000000000000000000000001572 123.0
BYD3_k127_3975110_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 4.524e-277 876.0
BYD3_k127_3975110_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 374.0
BYD3_k127_3975110_2 Aminotransferase class-V - GO:0001505,GO:0003674,GO:0003824,GO:0004760,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006807,GO:0008150,GO:0008152,GO:0008453,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019265,GO:0019752,GO:0042133,GO:0042136,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007765 335.0
BYD3_k127_3975110_3 NAD binding K00003,K00058,K01752,K16843 - 1.1.1.3,1.1.1.310,1.1.1.399,1.1.1.95,4.3.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 298.0
BYD3_k127_3975110_4 haloacid dehalogenase-like hydrolase K02203 - 2.7.1.39,3.1.3.3 0.0000000000000000000000004099 107.0
BYD3_k127_3976692_0 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 438.0
BYD3_k127_3976859_0 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 404.0
BYD3_k127_3976859_1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000002041 257.0
BYD3_k127_3976859_2 - - - - 0.000000000000000000000000000000000007433 148.0
BYD3_k127_3976859_3 protein secretion K09800 - - 0.0000000002079 75.0
BYD3_k127_3976859_4 Sigma-70 region 2 - - - 0.000000002381 66.0
BYD3_k127_3982127_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 391.0
BYD3_k127_3982127_1 cytochrome c oxidase subunit III K02276 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000002502 229.0
BYD3_k127_3982127_2 Tetratricopeptide repeat - - - 0.000000000000000000000000001106 121.0
BYD3_k127_3982127_3 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000002538 104.0
BYD3_k127_3982127_4 Trypsin-like serine protease K01337 - 3.4.21.50 0.0000000002417 68.0
BYD3_k127_3982127_5 - - - - 0.000000215 60.0
BYD3_k127_3983310_0 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 - 2.6.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 397.0
BYD3_k127_3983310_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000731 302.0
BYD3_k127_3983310_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000001095 264.0
BYD3_k127_3983310_3 Deoxynucleoside kinase K15518 - 2.7.1.113 0.0000000000000000000000000000000000000000000000000000000000000000002376 236.0
BYD3_k127_3983310_4 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000002999 218.0
BYD3_k127_3983310_5 Scavenger mRNA decapping enzyme C-term binding K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000003158 183.0
BYD3_k127_3983310_6 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.00000000000000000000000000000000000000001716 164.0
BYD3_k127_3983310_7 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000135 75.0
BYD3_k127_3983310_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000002308 63.0
BYD3_k127_3983310_9 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.0000002829 57.0
BYD3_k127_3986190_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 584.0
BYD3_k127_3986190_1 Adenylosuccinate lyase C-terminus K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006965 504.0
BYD3_k127_3986190_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000001322 187.0
BYD3_k127_3986190_3 Trypsin K04691 - - 0.0000000000000000000000000000000000000000001755 164.0
BYD3_k127_3986190_4 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000235 129.0
BYD3_k127_4037859_0 modulator of DNA gyrase K03568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004562 367.0
BYD3_k127_4037859_1 Zn-dependent proteases and their inactivated homologs K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007041 311.0
BYD3_k127_4037859_2 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000121 291.0
BYD3_k127_4037859_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002861 274.0
BYD3_k127_4037859_4 Ferredoxin--NADP reductase K21567 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000002396 240.0
BYD3_k127_4037859_5 DNA polymerase X family - - - 0.000000000000000000000000000003149 124.0
BYD3_k127_4037859_6 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000000000008262 104.0
BYD3_k127_406725_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 5.489e-217 706.0
BYD3_k127_406725_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 468.0
BYD3_k127_406725_10 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000004789 189.0
BYD3_k127_406725_11 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.0000000000000000000000000000000000000000000000000009851 196.0
BYD3_k127_406725_12 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000004243 128.0
BYD3_k127_406725_13 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000007767 118.0
BYD3_k127_406725_14 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.000007489 54.0
BYD3_k127_406725_15 Permease MlaE K02066 - - 0.0002586 47.0
BYD3_k127_406725_2 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 443.0
BYD3_k127_406725_3 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 419.0
BYD3_k127_406725_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 329.0
BYD3_k127_406725_5 Ferrochelatase K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000113 300.0
BYD3_k127_406725_6 iron ion binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001384 266.0
BYD3_k127_406725_7 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004821 267.0
BYD3_k127_406725_8 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000001563 265.0
BYD3_k127_406725_9 Cytochrome c oxidase subunit III - - - 0.000000000000000000000000000000000000000000000000000001435 203.0
BYD3_k127_4122794_0 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001939 242.0
BYD3_k127_4122794_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000001424 169.0
BYD3_k127_4123111_0 Type II IV secretion system protein K02454,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 506.0
BYD3_k127_4123111_1 PFAM type II secretion system K02653,K12278 - - 0.000000000000000000000000000000000000000000000005371 198.0
BYD3_k127_4123111_2 Secretion system protein K02653 - - 0.0000000000008375 69.0
BYD3_k127_4137219_0 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000001661 130.0
BYD3_k127_4137219_1 Parallel beta-helix repeats - - - 0.00001187 56.0
BYD3_k127_4144499_0 PFAM Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 368.0
BYD3_k127_4144499_1 Mediates zinc uptake. May also transport other divalent cations - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 324.0
BYD3_k127_4144499_2 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.00000000000000000000000000000000000000000000000000002208 198.0
BYD3_k127_4144499_3 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000003209 169.0
BYD3_k127_4144499_4 pfam abc K01990,K09695 - - 0.0000000000000000000000000003528 130.0
BYD3_k127_4144499_5 Transport and Golgi organisation 2 - - - 0.00000000000000000000009113 109.0
BYD3_k127_4144499_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000001114 78.0
BYD3_k127_4144499_7 Cupredoxin-like domain - - - 0.0003 49.0
BYD3_k127_4161965_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 2.268e-247 802.0
BYD3_k127_4161965_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004828 280.0
BYD3_k127_4279872_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 353.0
BYD3_k127_4279872_1 Homocysteine S-methyltransferase - - - 0.0000000000000001502 85.0
BYD3_k127_4279872_2 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000004861 81.0
BYD3_k127_4285533_0 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003085 285.0
BYD3_k127_4285533_1 ABC transporter K06861 - - 0.00000000000000000000000000000000000003134 149.0
BYD3_k127_4285533_2 Lipopolysaccharide-assembly, LptC-related K09774,K11719 - - 0.000000000000000000000000000006271 128.0
BYD3_k127_4287456_0 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000003255 213.0
BYD3_k127_4287456_1 LVIVD repeat - - - 0.000000000000003479 90.0
BYD3_k127_4299189_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K04127,K11325,K21174 - 5.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 477.0
BYD3_k127_4299189_1 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 463.0
BYD3_k127_4299189_2 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 401.0
BYD3_k127_4299189_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006351 277.0
BYD3_k127_4299189_4 DoxX K15977 - - 0.000000000000000000000000000001614 127.0
BYD3_k127_4299189_5 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000004247 126.0
BYD3_k127_4299189_6 - - - - 0.000000000000008846 76.0
BYD3_k127_4302520_0 Copper amine oxidase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000001146 228.0
BYD3_k127_4302520_1 N-acetylmuramoyl-L-alanine amidase K01448 GO:0000003,GO:0000910,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0008745,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019954,GO:0022402,GO:0022414,GO:0030288,GO:0030313,GO:0031975,GO:0032505,GO:0042597,GO:0043093,GO:0044464,GO:0051301,GO:0061783 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000174 228.0
BYD3_k127_4302520_2 - - - - 0.0000000000000000000000000006175 123.0
BYD3_k127_4302520_3 Sigma-70 region 2 K03088 - - 0.0000000000003492 78.0
BYD3_k127_4306016_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000001336 228.0
BYD3_k127_4306016_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000005392 205.0
BYD3_k127_4306016_2 GTP cyclohydrolase K01495 - 3.5.4.16 0.000000000000000000001899 108.0
BYD3_k127_4306016_3 Glycosyltransferase like family 2 - - - 0.000000000000000008119 89.0
BYD3_k127_4313058_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000696 434.0
BYD3_k127_4313058_1 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000001547 162.0
BYD3_k127_4313058_2 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.0000007159 60.0
BYD3_k127_4382292_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 577.0
BYD3_k127_4382292_1 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007854 414.0
BYD3_k127_4382292_2 PFAM Type II secretion system protein E K02652 - - 0.0000000000000000000006382 111.0
BYD3_k127_4388609_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 499.0
BYD3_k127_4388609_1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 341.0
BYD3_k127_439256_0 Belongs to the glycosyl hydrolase 1 family K05350 - 3.2.1.21 0.000000000000000000000000000000000000000000000003289 179.0
BYD3_k127_439256_1 Oxidoreductase family, C-terminal alpha beta domain - - - 0.00000000000000000000000000000000000000001197 169.0
BYD3_k127_439256_2 Glycosyl hydrolase family 1 K05350 - 3.2.1.21 0.000000000000000000005085 96.0
BYD3_k127_4417571_0 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000001262 195.0
BYD3_k127_4417571_1 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000008679 190.0
BYD3_k127_4417571_2 of the drug metabolite transporter (DMT) superfamily - GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0016020,GO:0022857,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.000000000000000000000000000008536 130.0
BYD3_k127_4472922_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 617.0
BYD3_k127_4472922_1 PFAM AMP-dependent synthetase and ligase K00666 - - 0.00000000000000000000000000000000000000000000000000000000001455 221.0
BYD3_k127_4472922_2 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000002597 83.0
BYD3_k127_4478155_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1221.0
BYD3_k127_4478155_1 Amino acid permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000421 292.0
BYD3_k127_4478155_2 Ferric reductase NAD binding domain - - - 0.00000001839 62.0
BYD3_k127_4499217_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 572.0
BYD3_k127_4499217_1 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 323.0
BYD3_k127_4499217_2 Bacterial regulatory protein, Fis family K02584 - - 0.00000000000000000000000000000000000000000000000000000000133 226.0
BYD3_k127_4499217_3 TIGRFAM cytochrome c nitrate reductase, small subunit K15876 - - 0.000000000000000000000000000000000000000000000000000004254 199.0
BYD3_k127_4499217_4 Gram-negative-bacterium-type cell wall biogenesis - - - 0.0005646 53.0
BYD3_k127_4507205_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 482.0
BYD3_k127_4507205_1 alginic acid biosynthetic process K01729 - 4.2.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002197 285.0
BYD3_k127_4507205_10 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 0.000001449 50.0
BYD3_k127_4507205_2 Domain of unknown function (DUF3473) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001817 257.0
BYD3_k127_4507205_3 alginic acid biosynthetic process K01729 - 4.2.2.3 0.000000000000000000000000000000001448 151.0
BYD3_k127_4507205_5 Trypsin-like serine protease K01337 - 3.4.21.50 0.000000000000000000000006038 113.0
BYD3_k127_4507205_6 PFAM Uncharacterised protein family (UPF0164) - - - 0.0000000000000000003863 101.0
BYD3_k127_4507205_7 Trypsin-like serine protease K01337 - 3.4.21.50 0.000000000004374 78.0
BYD3_k127_4507205_8 Trypsin-like serine protease K01337 - 3.4.21.50 0.0000000005226 71.0
BYD3_k127_4507205_9 PFAM ATP-binding region ATPase domain protein - - - 0.00000004153 66.0
BYD3_k127_4515973_0 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000008167 103.0
BYD3_k127_4515973_1 Cytochrome c - - - 0.000000000000000008087 97.0
BYD3_k127_4515973_2 required for the transfer of heme to apocytochrome c K02198 - - 0.00000000000003115 76.0
BYD3_k127_4515973_3 subunit of a heme lyase K02200 - - 0.000000001535 68.0
BYD3_k127_4648673_0 AMP-binding enzyme C-terminal domain K12424 - 6.2.1.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 445.0
BYD3_k127_4648673_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000004539 214.0
BYD3_k127_4648673_2 Glycosyl transferase family 2 - - - 0.0000000000000000000000009162 120.0
BYD3_k127_4682205_0 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000001779 179.0
BYD3_k127_4682205_1 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000008439 167.0
BYD3_k127_4722334_0 diaminopimelate decarboxylase activity K01586,K12526 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008836,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.4,4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007993 451.0
BYD3_k127_4722334_1 endonuclease activity K07451 - - 0.0000000000000000000000000000000000000000002886 174.0
BYD3_k127_4722334_2 PFAM CAAX amino terminal protease family - - - 0.0000000000000000000000000000000000007951 150.0
BYD3_k127_4722334_3 - - - - 0.000000000000000001822 85.0
BYD3_k127_4738149_0 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000005992 188.0
BYD3_k127_4738149_1 Sulfatase-modifying factor enzyme 1 K01176,K01206,K01218,K01219,K01224 - 3.2.1.1,3.2.1.51,3.2.1.78,3.2.1.81,3.2.1.89 0.0000007978 63.0
BYD3_k127_476709_0 Alpha-amylase domain K01176 - 3.2.1.1 2.198e-196 644.0
BYD3_k127_476709_1 Belongs to the ABC transporter superfamily K05816,K10112 - 3.6.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 401.0
BYD3_k127_476709_2 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 390.0
BYD3_k127_476709_3 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 391.0
BYD3_k127_476709_4 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 361.0
BYD3_k127_4782435_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 458.0
BYD3_k127_4782435_1 Family of unknown function (DUF1028) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 342.0
BYD3_k127_4782435_2 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 329.0
BYD3_k127_4782435_3 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001282 285.0
BYD3_k127_4782435_4 regulator of chromosome condensation, RCC1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001466 265.0
BYD3_k127_4782435_5 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000008808 243.0
BYD3_k127_4782435_6 ADP-glyceromanno-heptose 6-epimerase activity K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000002473 238.0
BYD3_k127_4782435_7 endonuclease activity K07451 - - 0.00000000000000000000000000000000000000000000000001927 196.0
BYD3_k127_4782435_8 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000002551 109.0
BYD3_k127_4782435_9 nucleotide catabolic process K05996 - 3.4.17.18 0.00000000001862 76.0
BYD3_k127_4814610_0 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 396.0
BYD3_k127_4814610_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 348.0
BYD3_k127_4814610_2 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005375 311.0
BYD3_k127_4814610_3 PFAM MazG nucleotide pyrophosphohydrolase K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000455 224.0
BYD3_k127_4814610_4 Pyrimidine nucleoside phosphorylase C-terminal domain K00756,K00758 - 2.4.2.2,2.4.2.4 0.0000000000000000000000000000166 122.0
BYD3_k127_4814610_5 Arginase family K01480 - 3.5.3.11 0.00000000000000000000002575 101.0
BYD3_k127_4814610_6 Domain of unknown function (DUF1844) - - - 0.000000000000000000000179 100.0
BYD3_k127_4814610_7 UvrD-like helicase C-terminal domain K03657 GO:0000018,GO:0000166,GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009892,GO:0009987,GO:0010605,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030312,GO:0030554,GO:0031323,GO:0031324,GO:0032392,GO:0032508,GO:0032552,GO:0032554,GO:0032558,GO:0032564,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0036094,GO:0040007,GO:0042623,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0045910,GO:0045934,GO:0046483,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051716,GO:0060255,GO:0060542,GO:0060543,GO:0065007,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.000004674 53.0
BYD3_k127_4821058_0 LmbE family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 599.0
BYD3_k127_4821058_1 Glucose / Sorbosone dehydrogenase K00117,K21430 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016901,GO:0019842,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046872,GO:0048037,GO:0048038,GO:0055114,GO:0070968,GO:0097159,GO:1901363 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 459.0
BYD3_k127_4821058_2 HI0933-like protein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001057 248.0
BYD3_k127_4821058_3 Glycine zipper - - - 0.000000000000000000000000000000000000000000000000000000000201 212.0
BYD3_k127_4821058_4 PFAM Cold-shock protein, DNA-binding K03704 - - 0.0000000000000000000000000005219 113.0
BYD3_k127_4842035_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000608 426.0
BYD3_k127_4842035_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.000000000000000000000000000000000000000000000007236 187.0
BYD3_k127_4842035_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000001935 142.0
BYD3_k127_488556_0 Amino acid amide ABC transporter ATP-binding protein 1, HAAT family K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009034 309.0
BYD3_k127_488556_1 ABC transporter, ATP-binding protein K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 301.0
BYD3_k127_488556_2 Branched-chain amino acid transport system / permease component K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003352 248.0
BYD3_k127_4971034_0 DNA integration K14059 - - 0.0000000000000000000000000000000000000000000000000001638 195.0
BYD3_k127_5086358_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 3.215e-209 666.0
BYD3_k127_5086358_1 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 410.0
BYD3_k127_5086358_2 Protein of unknown function (DUF3485) - - - 0.0000000000000000000000000000000000368 145.0
BYD3_k127_5086358_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000007286 108.0
BYD3_k127_5086358_4 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000006619 99.0
BYD3_k127_5086358_5 - - - - 0.0000000001544 71.0
BYD3_k127_5155356_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 618.0
BYD3_k127_5155356_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003028 471.0
BYD3_k127_5155356_10 rRNA binding K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000108 63.0
BYD3_k127_5155356_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006748 334.0
BYD3_k127_5155356_3 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000968 314.0
BYD3_k127_5155356_4 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008783 276.0
BYD3_k127_5155356_5 Tyrosine recombinase XerD K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000003141 250.0
BYD3_k127_5155356_6 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000003734 156.0
BYD3_k127_5155356_7 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.0000000000000000000000000127 119.0
BYD3_k127_5155356_8 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.000000000000000000000008355 102.0
BYD3_k127_5155356_9 Bacterial Ig-like domain K07156 - - 0.000000000000000615 93.0
BYD3_k127_5167823_0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 613.0
BYD3_k127_5167823_1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006006 407.0
BYD3_k127_5167823_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000001098 207.0
BYD3_k127_5167823_3 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000001408 201.0
BYD3_k127_5167823_4 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000261 167.0
BYD3_k127_5167823_5 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000002246 149.0
BYD3_k127_5167823_6 A G-specific adenine glycosylase K03574,K03575 - 3.6.1.55 0.00000000000000000000000237 116.0
BYD3_k127_5205202_0 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 1.459e-222 713.0
BYD3_k127_5205202_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 630.0
BYD3_k127_5205202_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008256 454.0
BYD3_k127_5205202_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 394.0
BYD3_k127_5205202_4 NADH ubiquinone oxidoreductase 24 kD subunit K00334,K03943 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000005533 158.0
BYD3_k127_5205202_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000006047 129.0
BYD3_k127_5205202_6 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000001303 114.0
BYD3_k127_5205202_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K13378 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.000004886 48.0
BYD3_k127_5209717_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009704 595.0
BYD3_k127_5209717_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008405 336.0
BYD3_k127_5209717_2 PFAM Glucose-6-phosphate dehydrogenase subunit - - - 0.000000001787 71.0
BYD3_k127_5209717_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000287 62.0
BYD3_k127_5215309_0 dehydrogenase e1 component K00164 - 1.2.4.2 3.755e-210 670.0
BYD3_k127_5215309_1 dehydrogenase e1 component K00164 - 1.2.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 464.0
BYD3_k127_5215309_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000005583 115.0
BYD3_k127_5245079_0 5TM C-terminal transporter carbon starvation CstA K06200 - - 1.432e-207 663.0
BYD3_k127_5245079_1 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 628.0
BYD3_k127_5245079_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K03601,K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004784,GO:0005488,GO:0005506,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009266,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009607,GO:0009628,GO:0009636,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0010269,GO:0010447,GO:0016020,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0020012,GO:0030145,GO:0030682,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0042597,GO:0043167,GO:0043169,GO:0043207,GO:0044237,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052059,GO:0052173,GO:0052200,GO:0052385,GO:0052550,GO:0052564,GO:0052567,GO:0052572,GO:0055114,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071291,GO:0071450,GO:0071451,GO:0071944,GO:0072593,GO:0075136,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.15.1.1,3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000002229 229.0
BYD3_k127_5245079_3 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000001159 205.0
BYD3_k127_5245079_4 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000000000000000000000000003764 141.0
BYD3_k127_5245079_5 Predicted integral membrane protein (DUF2269) - - - 0.0000000000000000000000000001687 121.0
BYD3_k127_5245079_6 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000008473 102.0
BYD3_k127_5275001_0 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 461.0
BYD3_k127_5275001_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008952 436.0
BYD3_k127_5275001_2 - - - - 0.00000000000000000000000000000000000000000087 164.0
BYD3_k127_5275001_3 TPR repeat - - - 0.00000000000000000000000000000000000000004922 168.0
BYD3_k127_5275001_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000714 155.0
BYD3_k127_5283048_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 500.0
BYD3_k127_5283048_1 Neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 358.0
BYD3_k127_5283048_2 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000001064 252.0
BYD3_k127_5392303_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 322.0
BYD3_k127_5392303_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 304.0
BYD3_k127_5392303_2 Stress-induced protein - - - 0.000000000000000000000000000000000000000000000000000000000006236 220.0
BYD3_k127_5392303_3 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000002411 214.0
BYD3_k127_5392303_4 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000007981 206.0
BYD3_k127_5392303_5 TPR repeat - - - 0.00000000000003627 86.0
BYD3_k127_5392303_6 Domain of unknown function (DUF4440) - - - 0.00000000000006324 85.0
BYD3_k127_540468_0 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 311.0
BYD3_k127_540468_1 PTS system sorbose subfamily IIB component K02794,K19507 - 2.7.1.191 0.0000000000000000000000006979 111.0
BYD3_k127_540468_2 system, fructose subfamily IIA component K02793,K02794 - 2.7.1.191 0.000000000000385 76.0
BYD3_k127_5432967_0 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 593.0
BYD3_k127_5432967_1 YmdB-like protein K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 327.0
BYD3_k127_5432967_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001287 286.0
BYD3_k127_5432967_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000004 265.0
BYD3_k127_5432967_4 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000001852 179.0
BYD3_k127_5432967_5 phenylalanyl-tRNA synthetase (beta subunit) K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.000000000000000000000000001017 117.0
BYD3_k127_5432967_6 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000002091 73.0
BYD3_k127_5432967_7 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000003811 61.0
BYD3_k127_5468182_0 MMPL family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006457 395.0
BYD3_k127_5468182_1 ECF sigma factor K03088 - - 0.00000000000000000000000000001703 125.0
BYD3_k127_5468182_2 Outer membrane efflux protein K12340 - - 0.00000000000000001729 94.0
BYD3_k127_5470812_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 327.0
BYD3_k127_5470812_1 peptidase activity, acting on L-amino acid peptides K09607 - - 0.00000000000000000000000000000000000000002456 175.0
BYD3_k127_5470812_2 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000001007 92.0
BYD3_k127_5470812_3 Acetyltransferase (GNAT) family - - - 0.0001485 52.0
BYD3_k127_5491164_0 plastoquinone (Complex I) K12141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 395.0
BYD3_k127_5491164_1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 323.0
BYD3_k127_5494983_0 Peptidase dimerisation domain K01438,K01439 - 3.5.1.16,3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 404.0
BYD3_k127_5494983_1 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001034 282.0
BYD3_k127_5494983_2 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000003313 214.0
BYD3_k127_5494983_3 metallophosphoesterase K07096 - - 0.000000000000000000000000000000000000000000000000001151 193.0
BYD3_k127_5530487_0 GTP binding K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.00000000000000000000000000000000000000000000000000000000000000000001018 250.0
BYD3_k127_5530487_1 Kdo2-lipid A biosynthetic process K02517,K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.241,2.3.1.265 0.00000000000001673 82.0
BYD3_k127_5545512_0 Dehydrogenase K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 435.0
BYD3_k127_5545512_1 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000259 279.0
BYD3_k127_5545512_2 alkylbase DNA N-glycosylase activity K03652 - 3.2.2.21 0.000000000000000000000000000000000000000000000001199 181.0
BYD3_k127_5545512_3 Redoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000596 166.0
BYD3_k127_5545512_4 - - - - 0.0000000000000000000000000000001968 136.0
BYD3_k127_5545684_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 1.094e-199 656.0
BYD3_k127_5545684_1 Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 396.0
BYD3_k127_5545684_2 PFAM Amidohydrolase 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 320.0
BYD3_k127_5545684_3 M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 298.0
BYD3_k127_5545684_4 M42 glutamyl aminopeptidase K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000133 298.0
BYD3_k127_5545684_5 M42 glutamyl aminopeptidase K01179,K20609 - 3.2.1.4 0.00000000000000000000000000000000000549 154.0
BYD3_k127_5545684_6 CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000002206 90.0
BYD3_k127_5545684_7 Glycosyl transferases group 1 - - - 0.00000000000000002216 97.0
BYD3_k127_5545684_8 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000002837 73.0
BYD3_k127_5549254_0 amino acid activation for nonribosomal peptide biosynthetic process K05996 - 3.4.17.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 387.0
BYD3_k127_5549254_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 350.0
BYD3_k127_5660030_0 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 312.0
BYD3_k127_5660030_1 PFAM Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004415 306.0
BYD3_k127_5660030_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000001393 201.0
BYD3_k127_5660030_3 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000005081 83.0
BYD3_k127_5660030_4 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0000000000002637 81.0
BYD3_k127_5660030_5 Belongs to the UPF0235 family K09131 - - 0.000000007917 63.0
BYD3_k127_5665631_0 Belongs to the short-chain dehydrogenases reductases (SDR) family K05886 - 1.1.1.276 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000098 283.0
BYD3_k127_5665631_1 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000003704 176.0
BYD3_k127_5665631_2 DNA restriction-modification system K07317 - 2.1.1.72 0.000000000000000000000000000000000000000000486 169.0
BYD3_k127_5665631_3 Alpha beta - - - 0.0000000000000001038 95.0
BYD3_k127_5676941_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 3.618e-250 791.0
BYD3_k127_5676941_1 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 GO:0003674,GO:0003824,GO:0004016,GO:0009975,GO:0016829,GO:0016849 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000000000005939 253.0
BYD3_k127_5676941_10 energy transducer activity K00700,K03832 - 2.4.1.18 0.0001349 53.0
BYD3_k127_5676941_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000004283 237.0
BYD3_k127_5676941_3 PFAM glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000001499 209.0
BYD3_k127_5676941_4 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000004557 186.0
BYD3_k127_5676941_5 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000006575 184.0
BYD3_k127_5676941_6 Probable zinc-ribbon domain - - - 0.000000000000000000000000000001172 126.0
BYD3_k127_5676941_7 CAAX protease self-immunity - - - 0.00000000000000000000000003512 119.0
BYD3_k127_5676941_8 PspC domain - - - 0.000000000000000001188 88.0
BYD3_k127_5676941_9 Cold shock protein K03704 - - 0.00000000000000001758 88.0
BYD3_k127_5678238_0 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000001035 224.0
BYD3_k127_5678238_1 - - - - 0.000000001611 63.0
BYD3_k127_5701699_0 DNA topoisomerase II activity K02469 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004528 509.0
BYD3_k127_5701699_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 349.0
BYD3_k127_5701699_10 Lysin motif - - - 0.000000004311 69.0
BYD3_k127_5701699_11 polygalacturonase activity - - - 0.0000000114 67.0
BYD3_k127_5701699_2 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 346.0
BYD3_k127_5701699_3 PFAM peptidase M16 domain protein K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002785 302.0
BYD3_k127_5701699_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K03851,K15372 - 2.6.1.55,2.6.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000709 259.0
BYD3_k127_5701699_5 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.0000000000000000000000000000000000000000000000000000000000003171 218.0
BYD3_k127_5701699_6 Belongs to the peptidase S11 family K01286,K07258,K07262 GO:0000003,GO:0000270,GO:0000910,GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0006022,GO:0006508,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016043,GO:0016787,GO:0019538,GO:0019954,GO:0022402,GO:0022414,GO:0030203,GO:0032505,GO:0042221,GO:0042493,GO:0042597,GO:0043093,GO:0043170,GO:0044238,GO:0044464,GO:0045229,GO:0050896,GO:0051301,GO:0070011,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0140096,GO:1901135,GO:1901564 3.4.16.4 0.0000000000000000000000000000000000000000000000000005762 197.0
BYD3_k127_5701699_7 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.00000000000000000000000000000000000001811 145.0
BYD3_k127_5701699_8 DMT(Drug metabolite transporter) superfamily permease - - - 0.00000000000000000000000000000000000002476 155.0
BYD3_k127_5701699_9 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.00000000000000003053 93.0
BYD3_k127_5708852_0 lyase activity - - - 0.000000000000000000000000000000000000000000000000005962 203.0
BYD3_k127_5708852_1 AAA domain - - - 0.00000000000000000000001372 114.0
BYD3_k127_5739112_0 COG2513 PEP phosphonomutase and related enzymes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 343.0
BYD3_k127_5739112_1 Lipocalin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001118 241.0
BYD3_k127_5739112_2 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000007563 146.0
BYD3_k127_5739112_3 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000000000000000008748 121.0
BYD3_k127_5789192_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 2.847e-252 790.0
BYD3_k127_5789192_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0000988,GO:0000989,GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010556,GO:0015035,GO:0015036,GO:0016020,GO:0016032,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0016989,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031326,GO:0032991,GO:0034641,GO:0034645,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0055114,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0140096,GO:0140110,GO:1901360,GO:1901576,GO:1903506,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009496 370.0
BYD3_k127_5789192_2 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000006067 248.0
BYD3_k127_5789192_3 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000008509 221.0
BYD3_k127_5789192_4 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000009068 164.0
BYD3_k127_5789192_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000001148 121.0
BYD3_k127_5789192_6 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000001299 112.0
BYD3_k127_5814753_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 7.582e-244 778.0
BYD3_k127_5814753_1 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 356.0
BYD3_k127_5814753_2 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000007329 129.0
BYD3_k127_5850865_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 572.0
BYD3_k127_5850865_1 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005974 278.0
BYD3_k127_5850865_2 PFAM phosphoesterase, PA-phosphatase related K19302 - 3.6.1.27 0.000000000000000000002289 102.0
BYD3_k127_5850865_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000001419 88.0
BYD3_k127_587701_0 3-isopropylmalate dehydrogenase activity K00030 - 1.1.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 508.0
BYD3_k127_587701_1 PFAM Aminotransferase class I and II K00812,K10907 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001041 258.0
BYD3_k127_587701_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000003461 123.0
BYD3_k127_587701_3 Putative regulatory protein - - - 0.00000000000000000000000466 105.0
BYD3_k127_5898230_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009919 496.0
BYD3_k127_5898230_1 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 422.0
BYD3_k127_5898230_2 PEP-CTERM exosortase 1-associated glycosyltransferase, Daro_2409 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 413.0
BYD3_k127_5898230_3 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 309.0
BYD3_k127_5898230_4 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000086 312.0
BYD3_k127_5898230_5 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 297.0
BYD3_k127_5898230_6 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000001289 254.0
BYD3_k127_5898230_7 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000216 117.0
BYD3_k127_589917_0 HEAT repeat - - - 0.000002852 61.0
BYD3_k127_589917_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0007643 52.0
BYD3_k127_5911387_0 Metallopeptidase family M24 K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 301.0
BYD3_k127_5911387_1 ABC-2 family transporter protein K09696 - - 0.000000000000000000000000000000002614 146.0
BYD3_k127_5911387_2 ABC transporter K01990,K09697 - 3.6.3.7 0.000000000000000000000000000001294 124.0
BYD3_k127_5911387_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000001368 78.0
BYD3_k127_6027083_0 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains K11914 - - 0.000000000000000000000000000000000000000000000000000000000000002558 244.0
BYD3_k127_6027083_1 Protein of unknown function, DUF484 - - - 0.00000000000000000000000001662 124.0
BYD3_k127_6034337_0 DNA polymerase K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0 1118.0
BYD3_k127_6034337_1 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 496.0
BYD3_k127_6034337_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 393.0
BYD3_k127_6034337_3 Propeptide_C25 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 373.0
BYD3_k127_6034337_4 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000005385 196.0
BYD3_k127_6034337_5 Trm112p-like protein K09791 - - 0.000000000000001451 79.0
BYD3_k127_6038445_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.019e-221 709.0
BYD3_k127_6038445_1 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000002771 243.0
BYD3_k127_6038445_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000005006 196.0
BYD3_k127_6038445_3 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000964 143.0
BYD3_k127_6038445_4 Protein of unknown function (DUF503) K09764 - - 0.00000000000000005729 84.0
BYD3_k127_6038445_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000811 79.0
BYD3_k127_6064832_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 1.672e-289 926.0
BYD3_k127_6064832_1 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 603.0
BYD3_k127_6064832_2 Alpha beta hydrolase K00433 - 1.11.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000001858 269.0
BYD3_k127_6064832_3 - - - - 0.0004217 42.0
BYD3_k127_6141189_0 Alpha amylase, catalytic domain K01176,K01236 - 3.2.1.1,3.2.1.141 3.217e-210 667.0
BYD3_k127_6148870_0 cellulase activity K06882 - - 0.0000000000000000000000000000000000000000000000000000000004779 210.0
BYD3_k127_6148870_1 Evidence 5 No homology to any previously reported sequences K09607 - - 0.00000000000000000000000000000000000000000000002634 186.0
BYD3_k127_6148870_2 cell adhesion involved in biofilm formation - - - 0.0000000000000000000000000003903 131.0
BYD3_k127_6149709_0 Endonuclease Exonuclease Phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 348.0
BYD3_k127_6149709_1 Queuine tRNA-ribosyltransferase K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000377 339.0
BYD3_k127_6149709_10 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.000000000000002167 85.0
BYD3_k127_6149709_2 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006559 347.0
BYD3_k127_6149709_3 Domains REC, sigma54 interaction, HTH8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 325.0
BYD3_k127_6149709_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000001274 234.0
BYD3_k127_6149709_5 PFAM ATP-binding region ATPase domain protein K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000003375 202.0
BYD3_k127_6149709_6 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000005894 175.0
BYD3_k127_6149709_7 Domains REC, sigma54 interaction, HTH8 - - - 0.000000000000000000000000000001389 125.0
BYD3_k127_6149709_8 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000001228 108.0
BYD3_k127_6149709_9 Preprotein translocase, YajC subunit K03210 - - 0.000000000000000005651 87.0
BYD3_k127_6173217_0 PglZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 548.0
BYD3_k127_6173217_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000043 485.0
BYD3_k127_6173217_10 Universal bacterial protein YeaZ K14742 - - 0.000000000000000445 89.0
BYD3_k127_6173217_2 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 352.0
BYD3_k127_6173217_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 GO:0001676,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0003824,GO:0003989,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006417,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0017148,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032787,GO:0032991,GO:0034248,GO:0034249,GO:0042759,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:0097159,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:2000112,GO:2000113 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 345.0
BYD3_k127_6173217_4 Integral membrane sensor signal transduction histidine kinase K07709,K13924 - 2.1.1.80,2.7.13.3,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 301.0
BYD3_k127_6173217_5 PFAM Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000002203 263.0
BYD3_k127_6173217_6 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000006179 158.0
BYD3_k127_6173217_7 protein family UPF0079, ATPase K06925 - - 0.0000000000000000000000000001967 121.0
BYD3_k127_6173217_8 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000000003467 121.0
BYD3_k127_6173217_9 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774 - - 0.00000000000000000005777 102.0
BYD3_k127_6181314_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 2.237e-253 802.0
BYD3_k127_6181314_1 Belongs to the peptidase M16 family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008024 370.0
BYD3_k127_6181314_2 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000008717 197.0
BYD3_k127_6181314_3 Ribosomal_S15 K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000006909 126.0
BYD3_k127_6181314_4 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.0000000000000000000000000132 126.0
BYD3_k127_6181314_5 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000005157 68.0
BYD3_k127_6201414_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 1.054e-227 724.0
BYD3_k127_6201414_1 PFAM thiamine pyrophosphate protein domain protein TPP-binding K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 439.0
BYD3_k127_6201414_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 425.0
BYD3_k127_6201414_3 Ferredoxin - - - 0.00000000000000000001973 91.0
BYD3_k127_6220218_0 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 403.0
BYD3_k127_6220218_1 peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 334.0
BYD3_k127_6223759_0 Polysaccharide pyruvyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000003374 228.0
BYD3_k127_6223759_1 PFAM GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000005039 187.0
BYD3_k127_6259983_0 Tetratricopeptide repeat - - - 0.0000000000000005837 92.0
BYD3_k127_6259983_1 peptidyl-tyrosine sulfation - - - 0.0000000002202 72.0
BYD3_k127_6287353_0 tRNA nucleotidyltransferase domain 2 putative K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004845 413.0
BYD3_k127_6287353_1 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000001143 257.0
BYD3_k127_6287353_2 Histidine kinase K14986 - 2.7.13.3 0.00000000000000000000000000000000000001686 161.0
BYD3_k127_6287353_3 negative regulation of ribosome biogenesis K00969,K09710 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113 2.7.7.18 0.0000000000000000000000000004281 129.0
BYD3_k127_6287353_4 Arginyl tRNA synthetase N terminal dom K01887 - 6.1.1.19 0.0007219 46.0
BYD3_k127_6293578_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008612 349.0
BYD3_k127_6293578_1 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000001258 220.0
BYD3_k127_6293578_2 negative regulation of phosphate transmembrane transport K02039 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.00000000000000000000000000000000000000000000000000008771 204.0
BYD3_k127_6293578_3 inorganic phosphate transmembrane transporter activity K02037,K02038 GO:0008150,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044403,GO:0044419,GO:0051704 - 0.0000000000000000000000000005549 115.0
BYD3_k127_6333543_0 Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily K03615 - - 0.0000000000000000000000000000000000000000000000000005128 205.0
BYD3_k127_6333543_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000003475 162.0
BYD3_k127_6333543_2 Pyruvate flavodoxin ferredoxin oxidoreductase, thiamine diP-binding domain protein K00169 - 1.2.7.1 0.000000000000000000000000000004095 139.0
BYD3_k127_6333543_3 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 GO:0003674,GO:0003824,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016491,GO:0016625,GO:0016903,GO:0043873,GO:0050896,GO:0055114 1.2.7.1 0.00001816 57.0
BYD3_k127_6333543_4 Divergent 4Fe-4S mono-cluster K05337 - - 0.0004207 45.0
BYD3_k127_6333543_5 Pyruvate synthase K00169 - 1.2.7.1 0.0009479 52.0
BYD3_k127_640369_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0002682,GO:0002684,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006950,GO:0008150,GO:0009314,GO:0009380,GO:0009605,GO:0009607,GO:0009628,GO:0016020,GO:0032991,GO:0035821,GO:0042802,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 5.397e-257 834.0
BYD3_k127_640369_1 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 327.0
BYD3_k127_640369_2 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000007357 249.0
BYD3_k127_640369_3 ATP cone domain K07738 - - 0.0000000000000000000000000000000000000000000000001586 193.0
BYD3_k127_640369_4 Biotin protein ligase C terminal domain K03524 - 6.3.4.15 0.00000000000000000000000000000000000006511 161.0
BYD3_k127_640369_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000036 138.0
BYD3_k127_640369_6 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.000001265 51.0
BYD3_k127_6426204_0 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002805 300.0
BYD3_k127_6426204_1 PFAM HhH-GPD superfamily base excision DNA repair protein K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001364 256.0
BYD3_k127_6426204_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000287 237.0
BYD3_k127_6426204_3 belongs to the glycosyl hydrolase 13 family - - - 0.00000000000000004152 96.0
BYD3_k127_6426204_4 TIGRFAM squalene-associated FAD-dependent desaturase - - - 0.00000000000006845 74.0
BYD3_k127_6427344_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 587.0
BYD3_k127_6427344_1 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 521.0
BYD3_k127_6427344_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 376.0
BYD3_k127_6427344_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000006566 164.0
BYD3_k127_6505836_0 Acyl-CoA reductase (LuxC) - - - 0.00000000000000000000000000000000000000000000000000000000003598 225.0
BYD3_k127_6505836_1 MerR, DNA binding K19591 - - 0.000000000000000000000000000000000000000005376 159.0
BYD3_k127_6505836_2 Cupredoxin-like domain - - - 0.00006586 51.0
BYD3_k127_6507069_0 Monogalactosyldiacylglycerol (MGDG) synthase K03429,K03715 - 2.4.1.315,2.4.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000005944 265.0
BYD3_k127_6507069_1 Ribonuclease HII K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000006473 180.0
BYD3_k127_6507069_2 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000007638 136.0
BYD3_k127_6507069_3 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000001559 109.0
BYD3_k127_6507069_4 Belongs to the RNA methyltransferase TrmD family K00554,K01770 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228,4.6.1.12 0.00000000000000000005006 91.0
BYD3_k127_6522152_0 Sigma factor PP2C-like phosphatases K04757,K07315 - 2.7.11.1,3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 398.0
BYD3_k127_6522152_1 Anti-sigma factor antagonist K04749,K06378 - - 0.0000000000000000000000000000000000000000005539 166.0
BYD3_k127_6522152_2 Putative glutamine amidotransferase - - - 0.0009762 49.0
BYD3_k127_653094_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006574 458.0
BYD3_k127_653094_1 negative regulation of translational initiation K05554,K15885 - - 0.000000000000000000000000000000008162 134.0
BYD3_k127_653094_2 HNH nucleases - - - 0.00000000000000000000000000001643 125.0
BYD3_k127_653094_3 peptidase K01303 - 3.4.19.1 0.000000003413 61.0
BYD3_k127_6548540_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 377.0
BYD3_k127_6548540_1 protein histidine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000002442 209.0
BYD3_k127_6548540_2 Cupin superfamily (DUF985) K09705 - - 0.000000000000000000000000000000000000000000000000000000002936 204.0
BYD3_k127_6548540_4 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000001337 104.0
BYD3_k127_6577049_0 Anthranilate synthase component I K01657,K01665,K13950 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005957 370.0
BYD3_k127_6577049_1 Zinc-binding alcohol dehydrogenase family protein K13953 - 1.1.1.1 0.0000000000000000002675 88.0
BYD3_k127_6586542_0 FR47-like protein - - - 0.000000000000000000000000000000000000000000000208 171.0
BYD3_k127_6586542_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000001776 162.0
BYD3_k127_6586542_2 Integral membrane protein (intg_mem_TP0381) - - - 0.000000000000000000000000000000000003444 151.0
BYD3_k127_6586542_3 spore germination - - - 0.0000000000000000000000000008334 116.0
BYD3_k127_6593979_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005321 474.0
BYD3_k127_6593979_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 465.0
BYD3_k127_6593979_10 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000001958 221.0
BYD3_k127_6593979_11 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000942 206.0
BYD3_k127_6593979_12 PFAM lipopolysaccharide biosynthesis - - - 0.000000000000000000000000000000000000000000001619 191.0
BYD3_k127_6593979_13 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000001853 186.0
BYD3_k127_6593979_14 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000007181 182.0
BYD3_k127_6593979_15 Polysaccharide biosynthesis/export protein - - - 0.0000000000000000000000000000000000000000141 172.0
BYD3_k127_6593979_16 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( K02823 - - 0.00000000000000000000000000000000000000003961 173.0
BYD3_k127_6593979_17 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000001497 144.0
BYD3_k127_6593979_18 O-Antigen ligase - - - 0.00000000000000000000000001159 125.0
BYD3_k127_6593979_19 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000002538 104.0
BYD3_k127_6593979_2 Polysaccharide biosynthesis protein K15856 - 1.1.1.281 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000076 429.0
BYD3_k127_6593979_20 Protein of unknown function (DUF354) K09726 - - 0.0000000000000000009811 100.0
BYD3_k127_6593979_21 - - - - 0.00000000001174 78.0
BYD3_k127_6593979_22 Tetratricopeptide repeats - - - 0.00000000004262 71.0
BYD3_k127_6593979_3 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 398.0
BYD3_k127_6593979_4 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710,K12450 GO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005975,GO:0005976,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008460,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019305,GO:0019438,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044464,GO:0045226,GO:0046379,GO:0046383,GO:0046483,GO:0048037,GO:0050662,GO:0051287,GO:0055086,GO:0070404,GO:0071704,GO:0071944,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 4.2.1.46,4.2.1.76 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 368.0
BYD3_k127_6593979_5 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 318.0
BYD3_k127_6593979_6 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 304.0
BYD3_k127_6593979_7 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000003838 256.0
BYD3_k127_6593979_8 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000164 251.0
BYD3_k127_6593979_9 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000007404 218.0
BYD3_k127_6602541_0 Alpha amylase, catalytic domain K06044 - 5.4.99.15 1.746e-226 732.0
BYD3_k127_6616259_0 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 396.0
BYD3_k127_6616259_1 - - - - 0.00000000000000000000000000000000000000001974 168.0
BYD3_k127_6622289_0 TonB-dependent receptor K02014,K16087 - - 0.000000000000000000000002136 120.0
BYD3_k127_6622289_1 Subtilase family - - - 0.000004297 57.0
BYD3_k127_6751075_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K01498,K11752 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006725,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008703,GO:0008835,GO:0009058,GO:0009110,GO:0009231,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016614,GO:0016616,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0034641,GO:0036094,GO:0042364,GO:0042726,GO:0042727,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000001237 206.0
BYD3_k127_6751075_1 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000009977 82.0
BYD3_k127_6751075_2 - - - - 0.000009944 49.0
BYD3_k127_6783378_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 510.0
BYD3_k127_6824810_0 AAA ATPase K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 471.0
BYD3_k127_6824810_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002506 307.0
BYD3_k127_6824810_2 PFAM GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000000009815 172.0
BYD3_k127_6824810_3 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000005538 147.0
BYD3_k127_6824810_4 COG2143 Thioredoxin-related protein K04084 - 1.8.1.8 0.0000000000000000000000000000005531 130.0
BYD3_k127_6824810_5 - - - - 0.0000000000000000000000059 104.0
BYD3_k127_6824810_6 endonuclease activity K07451 - - 0.0000000000000000761 86.0
BYD3_k127_6824810_7 - - - - 0.0000088 57.0
BYD3_k127_6824810_8 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.0005067 45.0
BYD3_k127_6834748_0 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001661 269.0
BYD3_k127_6834748_2 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000015 238.0
BYD3_k127_6837656_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.0000000000006818 69.0
BYD3_k127_6864507_0 Heat shock 70 kDa protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0018995,GO:0019219,GO:0019222,GO:0020003,GO:0022607,GO:0030430,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0033643,GO:0033646,GO:0033655,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043230,GO:0043531,GO:0043656,GO:0043657,GO:0043933,GO:0044085,GO:0044183,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0065010,GO:0070887,GO:0071310,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 6.056e-238 741.0
BYD3_k127_6864507_1 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 461.0
BYD3_k127_6864507_10 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000003298 126.0
BYD3_k127_6864507_11 Response regulator receiver domain - - - 0.0000000000000000000000004108 123.0
BYD3_k127_6864507_12 PFAM protein phosphatase 2C domain protein, response regulator receiver K07315 - 3.1.3.3 0.000000000000000000000001689 113.0
BYD3_k127_6864507_2 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 317.0
BYD3_k127_6864507_3 Two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 310.0
BYD3_k127_6864507_4 glucan 1,4-alpha-glucosidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006203 304.0
BYD3_k127_6864507_5 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000000000004269 204.0
BYD3_k127_6864507_6 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000004093 198.0
BYD3_k127_6864507_7 - - - - 0.0000000000000000000000000000000000000000003382 166.0
BYD3_k127_6864507_8 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000008233 175.0
BYD3_k127_6864507_9 - - - - 0.00000000000000000000000000000000000001998 155.0
BYD3_k127_6882729_0 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 2.361e-205 660.0
BYD3_k127_6882729_1 Dienelactone hydrolase family K07020 - - 0.0000000000000000000000000000000000000000000001352 182.0
BYD3_k127_6924566_0 Protein of unknown function, DUF255 K06888 - - 6.858e-234 758.0
BYD3_k127_6924566_1 PFAM FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 608.0
BYD3_k127_6924566_10 PFAM Tetratricopeptide repeat - - - 0.0000001945 63.0
BYD3_k127_6924566_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008457 400.0
BYD3_k127_6924566_3 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 389.0
BYD3_k127_6924566_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 295.0
BYD3_k127_6924566_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001111 260.0
BYD3_k127_6924566_6 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - - 0.0000000000000000000000000000000000000000000000000000006909 203.0
BYD3_k127_6924566_7 PFAM Tetratricopeptide repeat - - - 0.00000000000000000008138 100.0
BYD3_k127_6924566_8 - - - - 0.00000000000000001359 85.0
BYD3_k127_6924566_9 ATPase with chaperone activity K07391 - - 0.0000000000429 66.0
BYD3_k127_6932197_0 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 7.005e-245 773.0
BYD3_k127_6932197_1 UbiA prenyltransferase family K02548 - 2.5.1.74 0.000000000000000000000000000002722 124.0
BYD3_k127_6970246_0 MreB/Mbl protein K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 469.0
BYD3_k127_6970246_1 Catalyzes cross-linking of the peptidoglycan cell wall K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 394.0
BYD3_k127_6970246_2 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000443 261.0
BYD3_k127_6970246_3 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000007747 142.0
BYD3_k127_6970246_4 shape-determining protein MreD K03571 - - 0.0000000002332 72.0
BYD3_k127_7071290_0 DNA polymerase III alpha subunit K02337,K14162 - 2.7.7.7 6.172e-303 960.0
BYD3_k127_7071290_1 Berberine and berberine like - - - 2.03e-205 653.0
BYD3_k127_7071290_10 Protein of unknown function (DUF3303) - - - 0.000000000000000000000000000000000005219 138.0
BYD3_k127_7071290_11 - - - - 0.0000000000000000000000000000000003199 139.0
BYD3_k127_7071290_12 PFAM UMUC domain protein DNA-repair protein K02346 - 2.7.7.7 0.0000000000000000000000000001258 130.0
BYD3_k127_7071290_13 transport system permease component - - - 0.0000000000000001857 90.0
BYD3_k127_7071290_14 DinB family - - - 0.000000001141 67.0
BYD3_k127_7071290_15 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00003431 55.0
BYD3_k127_7071290_2 Uncharacterized protein conserved in bacteria (DUF2330) K00347,K21163 GO:0000166,GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008137,GO:0008144,GO:0008150,GO:0008152,GO:0010181,GO:0015672,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0019842,GO:0030001,GO:0030964,GO:0032553,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0044425,GO:0044464,GO:0048037,GO:0050136,GO:0050662,GO:0051179,GO:0051234,GO:0055114,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:1901265,GO:1901363,GO:1902444,GO:1902494 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 315.0
BYD3_k127_7071290_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 321.0
BYD3_k127_7071290_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000005212 269.0
BYD3_k127_7071290_5 UreE urease accessory protein, C-terminal domain K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000008624 264.0
BYD3_k127_7071290_6 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000003438 237.0
BYD3_k127_7071290_7 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356,K03503 - 3.4.21.88 0.00000000000000000000000000000000000000000000000001985 188.0
BYD3_k127_7071290_8 DinB superfamily - - - 0.0000000000000000000000000000000000000002675 156.0
BYD3_k127_7071290_9 BAAT / Acyl-CoA thioester hydrolase C terminal K06889 - - 0.000000000000000000000000000000000003946 153.0
BYD3_k127_7073110_0 ADP-ribosylation factor family K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 286.0
BYD3_k127_7073110_1 Belongs to the CinA family K03742 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008447 296.0
BYD3_k127_7073110_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000202 241.0
BYD3_k127_7073110_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000169 208.0
BYD3_k127_7073110_4 Roadblock/LC7 domain - - - 0.0000000000000000000000000000000000000117 153.0
BYD3_k127_7073110_5 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000001587 129.0
BYD3_k127_7073110_6 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000001258 115.0
BYD3_k127_7073110_7 PFAM phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.00000000000000000000000983 111.0
BYD3_k127_7093814_0 dna ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 457.0
BYD3_k127_7093814_1 PFAM ATP dependent DNA ligase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 449.0
BYD3_k127_7093814_2 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 371.0
BYD3_k127_7093814_3 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002104 243.0
BYD3_k127_7093814_4 - - - - 0.00000000000000000000000000000000000000000000000000000008228 205.0
BYD3_k127_7093814_5 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000000001634 199.0
BYD3_k127_7093814_6 DoxX family K15977 - - 0.000000000000000000000000000002565 137.0
BYD3_k127_7093814_7 PHP domain K04477 - - 0.0000000546 55.0
BYD3_k127_709431_0 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 335.0
BYD3_k127_709431_1 PFAM Extracellular solute-binding protein, family 3 K10001 - - 0.00000000000000000009485 103.0
BYD3_k127_7202275_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 5.313e-233 761.0
BYD3_k127_7202275_1 serine-type peptidase activity K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008231 451.0
BYD3_k127_7202275_2 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007985 427.0
BYD3_k127_7202275_3 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.000000000000000000000000000000000000000000000000000000000000000002981 235.0
BYD3_k127_7202275_4 Metal-dependent phosphohydrolase, HD region - - - 0.00000000000000000000000000000000000000000000000000000002712 214.0
BYD3_k127_7202275_5 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000000000000000000000000000000000000000000000000007573 220.0
BYD3_k127_7202275_6 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000000004917 175.0
BYD3_k127_7202275_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.000000000000000000000000000000000002593 145.0
BYD3_k127_7202275_8 Anti-sigma regulatory factor (Ser Thr protein kinase) K04757 - 2.7.11.1 0.0000000000000000001103 105.0
BYD3_k127_7230772_0 membrane organization - - - 6.539e-204 665.0
BYD3_k127_7230772_1 Sodium/calcium exchanger protein K07300 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009036 386.0
BYD3_k127_7230772_2 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 312.0
BYD3_k127_7230772_3 TIGRFAM phosphoesterase, MJ0936 family K07095 - - 0.000000000000000000000000000000000000000000000000001072 191.0
BYD3_k127_7230772_4 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.00000000000000000000000000000000000003008 145.0
BYD3_k127_7230772_5 coenzyme binding K07071 - - 0.000000000000000000000000000008091 131.0
BYD3_k127_7230772_6 endo-1,4-beta-xylanase activity K21606 - 3.2.1.202 0.00001226 51.0
BYD3_k127_7241638_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 527.0
BYD3_k127_7241638_1 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000007135 198.0
BYD3_k127_7241638_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000003642 203.0
BYD3_k127_7241638_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000007075 154.0
BYD3_k127_7241638_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K20444 - - 0.0000000000000000000000000000000000000275 160.0
BYD3_k127_7276544_0 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 353.0
BYD3_k127_7276544_1 Histidine kinase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000003055 122.0
BYD3_k127_7281694_0 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 469.0
BYD3_k127_7281694_1 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 462.0
BYD3_k127_7281694_2 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 308.0
BYD3_k127_7281694_3 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K01556 - 3.7.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000002321 246.0
BYD3_k127_7281694_4 (ABC) transporter K05847 GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0031460,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0072337 - 0.0000000000000000000000000000000000000000000000000000000001529 207.0
BYD3_k127_729542_0 Uncharacterized protein family (UPF0051) K09014 - - 1.889e-234 732.0
BYD3_k127_729542_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 507.0
BYD3_k127_729542_2 PFAM ABC transporter related K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 359.0
BYD3_k127_729542_3 Uncharacterized protein family (UPF0051) K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006902 337.0
BYD3_k127_729542_4 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000000000000002327 183.0
BYD3_k127_729542_5 Succinyl-CoA ligase like flavodoxin domain - - - 0.00000000000000000000000000000001343 134.0
BYD3_k127_729542_6 of nitrite reductase and ring-hydroxylating K05710 - - 0.00000000000000000000000000391 123.0
BYD3_k127_729542_7 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000001043 113.0
BYD3_k127_729542_8 PFAM transcriptional coactivator pterin dehydratase K01724 - 4.2.1.96 0.0000000000000000000001919 99.0
BYD3_k127_729542_9 Iron-sulfur cluster assembly protein - - - 0.0000000004769 67.0
BYD3_k127_7302113_0 Oxidoreductase - - - 1.081e-229 724.0
BYD3_k127_7302113_1 Surface antigen variable number K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 466.0
BYD3_k127_7302113_2 Glycine cleavage T-protein C-terminal barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 463.0
BYD3_k127_7302113_3 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 414.0
BYD3_k127_7302113_4 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004556 301.0
BYD3_k127_7302113_5 Subtilase family K14743 - - 0.00000000000000000001052 102.0
BYD3_k127_7302113_6 Pathogenicity protein K09800 - - 0.000000000001977 81.0
BYD3_k127_7302113_7 cellulase activity K01179,K01361,K13277,K21449 - 3.2.1.4,3.4.21.96 0.00000000001976 74.0
BYD3_k127_7338897_0 His Kinase A (phosphoacceptor) domain - - - 0.0 2878.0
BYD3_k127_7338897_1 ERAP1-like C-terminal domain K01256,K01263 - 3.4.11.14,3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005057 589.0
BYD3_k127_7338897_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 474.0
BYD3_k127_7338897_3 Serine threonine protein kinase K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.000000000002818 69.0
BYD3_k127_7338897_4 - - - - 0.000001178 56.0
BYD3_k127_7354254_0 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 308.0
BYD3_k127_7354254_1 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000000000000001471 234.0
BYD3_k127_7354254_2 Disulphide bond corrector protein DsbC K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000001804 187.0
BYD3_k127_7354254_3 HI0933-like protein K07007 - - 0.00000000000000000000000001499 111.0
BYD3_k127_7362036_0 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 364.0
BYD3_k127_7362036_1 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000102 148.0
BYD3_k127_73831_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 553.0
BYD3_k127_73831_1 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 316.0
BYD3_k127_73831_2 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001838 275.0
BYD3_k127_73831_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000003145 239.0
BYD3_k127_73831_4 PFAM Thiamin pyrophosphokinase catalytic K00949 - 2.7.6.2 0.00000000000000000000000001494 117.0
BYD3_k127_7400424_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008868 398.0
BYD3_k127_7400424_1 MFS/sugar transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 323.0
BYD3_k127_7400424_2 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000001896 107.0
BYD3_k127_7400424_3 Src homology 3 domains - - - 0.0000000000000000002312 93.0
BYD3_k127_7400424_5 ChrR Cupin-like domain - - - 0.0000000006599 69.0
BYD3_k127_7400424_6 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.00001552 57.0
BYD3_k127_7400424_7 TonB-dependent Receptor Plug Domain K02014 - - 0.00003176 53.0
BYD3_k127_7401692_0 Ribosomal protein S1 K02945,K03527,K12132 GO:0005575,GO:0005576,GO:0018995,GO:0020003,GO:0030430,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0065010 1.17.7.4,2.7.11.1 1.173e-220 702.0
BYD3_k127_7401692_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000007709 271.0
BYD3_k127_7401692_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.0000000000000000000000000000000000000000000000016 179.0
BYD3_k127_7401692_3 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000001552 179.0
BYD3_k127_7401692_4 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000001148 136.0
BYD3_k127_7401692_5 SMART Elongator protein 3 MiaB NifB K18707 - 2.8.4.5 0.0000000000000000000000003699 113.0
BYD3_k127_7404092_0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 380.0
BYD3_k127_7404092_1 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000001548 171.0
BYD3_k127_7404092_2 Glyoxalase bleomycin resistance protein dioxygenase K06991 - - 0.0000000000000000000000000000000000000000001174 172.0
BYD3_k127_7404092_3 Cytochrome c - - - 0.0000000000000000000000000000000001132 141.0
BYD3_k127_7407966_0 3-beta hydroxysteroid dehydrogenase/isomerase family K08678 - 4.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 541.0
BYD3_k127_7407966_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000723 257.0
BYD3_k127_7407966_2 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.000000000000000000000000002178 126.0
BYD3_k127_7407966_3 Glucokinase K00845 - 2.7.1.2 0.000000000000000000000001059 106.0
BYD3_k127_7434353_0 Divalent cation transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 531.0
BYD3_k127_7434353_1 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 456.0
BYD3_k127_7434353_10 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0007191 49.0
BYD3_k127_7434353_2 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 430.0
BYD3_k127_7434353_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 353.0
BYD3_k127_7434353_4 PFAM Band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001289 266.0
BYD3_k127_7434353_5 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000003021 212.0
BYD3_k127_7434353_6 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000002378 153.0
BYD3_k127_7434353_7 Tetratricopeptide repeat - - - 0.000000001937 72.0
BYD3_k127_7434353_8 CarboxypepD_reg-like domain K13276 - - 0.00001046 59.0
BYD3_k127_7434353_9 Tetratricopeptide TPR_2 repeat protein - - - 0.0001302 55.0
BYD3_k127_7469142_0 PFAM sigma-54 factor interaction domain-containing protein K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 409.0
BYD3_k127_7469142_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009996 295.0
BYD3_k127_7469142_2 Signal transduction histidine kinase, nitrogen specific - - - 0.00000000000000000000000000000000000001135 162.0
BYD3_k127_7469142_3 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000005619 149.0
BYD3_k127_7482144_0 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000024 243.0
BYD3_k127_7482144_1 Peptidase family M50 K16922 - - 0.000000000000000000000000000000000000000000008 187.0
BYD3_k127_7482144_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000004135 94.0
BYD3_k127_7486786_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000155 173.0
BYD3_k127_7486786_1 SPTR Glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000001632 164.0
BYD3_k127_7486786_2 endonuclease activity K07451 - - 0.000000000000000000000000000000000000001858 160.0
BYD3_k127_7486786_3 PFAM glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000002476 106.0
BYD3_k127_7486786_4 Glycosyl transferase - - - 0.0000000000000001503 92.0
BYD3_k127_7486786_5 Mediates the transbilayer movement of Und-PP-GlcNAc- ManNAcA-Fuc4NAc (lipid III) from the inner to the outer leaflet of the cytoplasmic membrane during the assembly of enterobacterial common antigen (ECA) K03328,K16693 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000005407 72.0
BYD3_k127_7499715_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 469.0
BYD3_k127_7499715_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006687 401.0
BYD3_k127_7499715_2 FlgD Ig-like domain K15924 - 3.2.1.136 0.000000000000000000000000000000000000000000000007914 197.0
BYD3_k127_7499715_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0004140,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032552,GO:0032553,GO:0032554,GO:0032557,GO:0032558,GO:0032564,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000001159 140.0
BYD3_k127_7499715_4 - - - - 0.0000000000000000003042 103.0
BYD3_k127_7524128_0 Alginate lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 345.0
BYD3_k127_7524128_1 CobQ CobB MinD ParA nucleotide binding domain K16554,K16692 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005973 291.0
BYD3_k127_7524128_2 Glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000001104 254.0
BYD3_k127_7524128_3 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000002163 156.0
BYD3_k127_7524128_4 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000001152 154.0
BYD3_k127_7524128_5 PFAM O-antigen polymerase - - - 0.0000000000000000000000000005491 130.0
BYD3_k127_7524128_6 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000003205 108.0
BYD3_k127_7524128_7 Glycosyl transferases group 1 - - - 0.00000000000000000002118 93.0
BYD3_k127_7524128_8 Polysaccharide biosynthesis protein - - - 0.0000000000000947 84.0
BYD3_k127_7524128_9 SLBB domain K01991 - - 0.0000000004127 70.0
BYD3_k127_7531663_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000006802 266.0
BYD3_k127_7531663_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000001828 254.0
BYD3_k127_7531663_2 tRNA processing K06864 - - 0.000000000000000000000000000000000000000000000000000000000000624 235.0
BYD3_k127_7531663_3 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000000000000000000000000000000000002203 154.0
BYD3_k127_7531663_4 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0000000000000000000000000000005845 128.0
BYD3_k127_7531663_5 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000002591 124.0
BYD3_k127_7531663_6 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000003073 85.0
BYD3_k127_7531663_8 - - - - 0.000952 47.0
BYD3_k127_7531827_0 Glycosyltransferase like family 2 K03606,K07011 - - 0.0000000000000000000000000000000000000000000000000000000001835 219.0
BYD3_k127_7531827_1 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000001759 121.0
BYD3_k127_7531827_2 Two component regulator propeller - - - 0.00000000000000003742 98.0
BYD3_k127_760293_0 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000001082 217.0
BYD3_k127_760293_1 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000001164 153.0
BYD3_k127_760293_2 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000003698 128.0
BYD3_k127_760293_3 ComF family K02242 - - 0.000000001377 66.0
BYD3_k127_7617192_0 Protein involved in cellulose biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000001046 247.0
BYD3_k127_7617192_1 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000000000000000002399 233.0
BYD3_k127_7617192_2 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000006943 216.0
BYD3_k127_7617192_3 Protein involved in cellulose biosynthesis - - - 0.00000000000000000000000001784 123.0
BYD3_k127_7617192_5 Belongs to the DegT DnrJ EryC1 family - - - 0.0000004516 59.0
BYD3_k127_7712896_0 Formiminotransferase-cyclodeaminase K00603,K01746,K13990 - 2.1.2.5,4.3.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 491.0
BYD3_k127_7712896_1 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004581 372.0
BYD3_k127_7712896_2 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002103 282.0
BYD3_k127_7712896_3 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000001097 232.0
BYD3_k127_7712896_4 Urocanase C-terminal domain K01712 - 4.2.1.49 0.0000000000000000000000000000000000000000000001898 168.0
BYD3_k127_7712896_5 Tetratricopeptide repeat - - - 0.0000000000000000000000009183 121.0
BYD3_k127_7712896_6 Tetratricopeptide repeats - - - 0.000000000008818 78.0
BYD3_k127_7712896_7 - - - - 0.000000000197 69.0
BYD3_k127_7727738_0 ABC transporter K06147,K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 571.0
BYD3_k127_7727738_1 ABC transporter, transmembrane K18889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 471.0
BYD3_k127_7727738_2 Inositol monophosphatase K01092 GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25 0.000000001735 65.0
BYD3_k127_7727738_3 Zn-ribbon protein, possibly nucleic acid-binding K07164 - - 0.0005346 44.0
BYD3_k127_7729017_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000003387 247.0
BYD3_k127_7729017_1 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000215 201.0
BYD3_k127_7729017_2 PFAM Uncharacterised protein family (UPF0153) - - - 0.00000006332 60.0
BYD3_k127_7743065_0 pilus assembly protein K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006508 271.0
BYD3_k127_7743065_1 Type II and III secretion system protein K02666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001625 274.0
BYD3_k127_7743065_10 PFAM Pilus assembly protein PilO K02664 - - 0.00000000000000002206 90.0
BYD3_k127_7743065_12 Pilus assembly protein PilX K02673 - - 0.00002464 57.0
BYD3_k127_7743065_13 Pilus assembly protein PilX - - - 0.00005129 55.0
BYD3_k127_7743065_2 PFAM aminotransferase, class I K00812,K10907 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000004765 206.0
BYD3_k127_7743065_3 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000001011 179.0
BYD3_k127_7743065_4 oligosaccharyl transferase activity - - - 0.00000000000000000000000000000000000000001006 178.0
BYD3_k127_7743065_5 Protein of unknown function (DUF2723) - - - 0.00000000000000000000000000000000000009056 161.0
BYD3_k127_7743065_6 Methyltransferase K08316 - 2.1.1.171 0.00000000000000000000000000000001488 141.0
BYD3_k127_7743065_7 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000003618 109.0
BYD3_k127_7743065_8 oligosaccharyl transferase activity - - - 0.00000000000000000002639 99.0
BYD3_k127_7743065_9 Fimbrial assembly protein (PilN) K02663 - - 0.000000000000000001653 93.0
BYD3_k127_7759835_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 503.0
BYD3_k127_7759835_1 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 352.0
BYD3_k127_7759835_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000003514 172.0
BYD3_k127_7759835_3 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000002159 148.0
BYD3_k127_7793801_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008056 441.0
BYD3_k127_7793801_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000002652 199.0
BYD3_k127_7793801_2 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000001404 181.0
BYD3_k127_7797172_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 489.0
BYD3_k127_7797172_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007619 291.0
BYD3_k127_7797172_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000007316 269.0
BYD3_k127_7797172_3 Bifunctional phosphoglucose phosphomannose isomerase K15916 - 5.3.1.8,5.3.1.9 0.00000000000000000000000000000000000000000000004176 195.0
BYD3_k127_7797172_4 PTS HPr component phosphorylation site K11189 - - 0.0000000000000000000000005824 106.0
BYD3_k127_7797172_5 Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IID K02796 - - 0.000000000000000000002026 105.0
BYD3_k127_7846439_0 helicase K03724 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.0 1264.0
BYD3_k127_7846439_1 Beta-eliminating lyase K01667 - 4.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000783 617.0
BYD3_k127_7846439_10 unfolded protein binding - - - 0.00000000000000003652 96.0
BYD3_k127_7846439_2 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 514.0
BYD3_k127_7846439_3 Di-haem oxidoreductase, putative peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 312.0
BYD3_k127_7846439_4 glyoxalase bleomycin resistance protein dioxygenase K07104 - 1.13.11.2 0.000000000000000000000000000000000000000000000000000000000000000000005615 239.0
BYD3_k127_7846439_5 Phosphodiester glycosidase - - - 0.000000000000000000000000000000000000000000000000000000003298 213.0
BYD3_k127_7846439_6 protein trimerization - - - 0.000000000000000000000000000000000005617 141.0
BYD3_k127_7846439_7 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07642 - 2.7.13.3 0.00000000000000000000000000000000002185 154.0
BYD3_k127_7846439_8 PFAM LmbE family protein - - - 0.000000000000000000000000000000000187 151.0
BYD3_k127_7846439_9 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000953 129.0
BYD3_k127_7857070_0 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 530.0
BYD3_k127_7857070_1 Domain of unknown function (DUF892) - - - 0.0000000000000000000000000000000000000000000002798 174.0
BYD3_k127_7857070_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000164 68.0
BYD3_k127_7857070_3 Evidence 4 Homologs of previously reported genes of - - - 0.00002294 51.0
BYD3_k127_7903094_0 N-terminal domain of Peptidase_S41 in eukaryotic IRBP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 322.0
BYD3_k127_7903094_1 ECF sigma factor K03088 GO:0001101,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042221,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000000000000003911 113.0
BYD3_k127_7955125_0 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.000000000000001038 89.0
BYD3_k127_7955125_1 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769,K03770 - 5.2.1.8 0.00004906 56.0
BYD3_k127_7962489_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 476.0
BYD3_k127_7962489_1 Protein of unknown function (DUF418) K07148 - - 0.000000000000000000000000000000000000003018 152.0
BYD3_k127_7962489_2 - - - - 0.0000000000002956 71.0
BYD3_k127_7976272_0 TPR repeat - - - 0.000000000000000000000000000000000000001272 157.0
BYD3_k127_7976272_1 Outer membrane lipoprotein K05807 - - 0.0000000000003792 75.0
BYD3_k127_8049057_0 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 1.631e-232 732.0
BYD3_k127_8070211_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006944 475.0
BYD3_k127_8070211_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 370.0
BYD3_k127_8070211_2 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 379.0
BYD3_k127_8070211_3 Transglycosylase SLT domain K08307,K12204 - - 0.00000000000000000000000000000000000000000000000000000000000000003947 243.0
BYD3_k127_8070211_4 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000001606 212.0
BYD3_k127_8070211_5 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000002034 218.0
BYD3_k127_8070211_6 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530,K05788 - - 0.0000000000000000000000005133 107.0
BYD3_k127_8074751_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 488.0
BYD3_k127_8074751_1 Diguanylate cyclase, GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005257 275.0
BYD3_k127_8074751_2 Domains GAF, HisKA, HATPase_c, GAF, HD-GYP-related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001101 276.0
BYD3_k127_8074751_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000002598 250.0
BYD3_k127_8074751_4 metal-dependent phosphohydrolase HD region - - - 0.000000000000000000000000000000000000000000000001631 199.0
BYD3_k127_8074751_5 His Kinase A (phospho-acceptor) domain - - - 0.000000000000000000000000000000000000000000000002164 199.0
BYD3_k127_8074751_6 PFAM response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000000000000000000000000005751 153.0
BYD3_k127_8074751_7 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.0004874 46.0
BYD3_k127_8074751_8 Inactive TPR repeat-containing thioredoxin K09527 GO:0003002,GO:0006950,GO:0006970,GO:0007154,GO:0007165,GO:0007275,GO:0007389,GO:0008150,GO:0009628,GO:0009719,GO:0009725,GO:0009733,GO:0009734,GO:0009741,GO:0009742,GO:0009755,GO:0009987,GO:0010033,GO:0010051,GO:0010305,GO:0014070,GO:0023052,GO:0032501,GO:0032502,GO:0032870,GO:0033993,GO:0042221,GO:0043401,GO:0048545,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070887,GO:0071310,GO:0071365,GO:0071367,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:1901700,GO:1901701 - 0.0006419 52.0
BYD3_k127_8086305_0 ERAP1-like C-terminal domain K01256,K01263 - 3.4.11.14,3.4.11.2 0.00000000001272 72.0
BYD3_k127_8086305_1 - - - - 0.00000000002318 78.0
BYD3_k127_8162777_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 420.0
BYD3_k127_8162777_1 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007627 343.0
BYD3_k127_8162777_2 efflux transmembrane transporter activity K15725 - - 0.00000000000000000000000000000000000000000000000000003619 203.0
BYD3_k127_8162777_3 Phosphodiester glycosidase - - - 0.0000000000000000000000000000000000000000000001681 175.0
BYD3_k127_8162777_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0000000000000000000000000000000003982 151.0
BYD3_k127_8162777_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000002472 113.0
BYD3_k127_8162777_6 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000001371 99.0
BYD3_k127_8162777_7 Belongs to the ompA family K03286 GO:0000746,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006950,GO:0006974,GO:0008150,GO:0009279,GO:0009597,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0015267,GO:0015288,GO:0016020,GO:0016021,GO:0016032,GO:0019058,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030260,GO:0030312,GO:0030313,GO:0031224,GO:0031975,GO:0032991,GO:0033554,GO:0034220,GO:0042802,GO:0043207,GO:0044403,GO:0044409,GO:0044419,GO:0044425,GO:0044462,GO:0044464,GO:0044764,GO:0046718,GO:0046930,GO:0050896,GO:0051179,GO:0051234,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051806,GO:0051828,GO:0055085,GO:0071944,GO:0098796 - 0.0001635 54.0
BYD3_k127_8178953_0 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000000000000000000000000000000003688 220.0
BYD3_k127_8178953_1 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000006367 164.0
BYD3_k127_8183195_0 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000931 394.0
BYD3_k127_8183195_1 Carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 310.0
BYD3_k127_8183195_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000335 285.0
BYD3_k127_8183195_3 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000005119 263.0
BYD3_k127_8183195_4 DinB family - - - 0.0000000000000000000000000000000000000000000000000000001719 198.0
BYD3_k127_8183195_5 AI-2E family transporter - - - 0.000000000000000000000000000000000000005429 162.0
BYD3_k127_8184088_0 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 310.0
BYD3_k127_8184088_1 major pilin protein fima - - - 0.000000000000000000000000000000000000000000000000000002188 203.0
BYD3_k127_8199421_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 2.731e-228 719.0
BYD3_k127_8199421_1 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 451.0
BYD3_k127_8199421_2 Coenzyme A transferase K01028 - 2.8.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 351.0
BYD3_k127_8199421_3 ArgK protein K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001916 268.0
BYD3_k127_8199421_4 B12 binding domain K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000004632 193.0
BYD3_k127_8199421_5 PFAM ATP corrinoid adenosyltransferase BtuR CobO CobP K19221 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000007509 192.0
BYD3_k127_8199421_6 coenzyme A transferase K01028 - 2.8.3.5 0.000000000007691 73.0
BYD3_k127_82067_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 496.0
BYD3_k127_82067_1 pfam psp1 - - - 0.000000000000000000000000000000000000000000000000000000000000008473 226.0
BYD3_k127_82067_2 hydrolase, TatD K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000004129 210.0
BYD3_k127_82067_3 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.00000000000000000000000000000000000000000000000000000005162 207.0
BYD3_k127_8248689_0 Peptidase family M1 domain K01992 - - 0.0 1055.0
BYD3_k127_8248689_1 (ABC) transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 294.0
BYD3_k127_8265493_0 Part of a membrane complex involved in electron transport K03615 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007133 442.0
BYD3_k127_8265493_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347,K03614 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 306.0
BYD3_k127_8265493_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000001654 169.0
BYD3_k127_8265493_3 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00169 GO:0003674,GO:0003824,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016491,GO:0050896,GO:0055114 1.2.7.1 0.00000000000000000000004975 115.0
BYD3_k127_8265493_4 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000001933 103.0
BYD3_k127_8265493_5 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.000002226 59.0
BYD3_k127_8275467_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001698 274.0
BYD3_k127_8275467_1 Bacterial regulatory protein, Fis family K07713 GO:0000156,GO:0000160,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0023052,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001829 274.0
BYD3_k127_8275467_2 Carbon-nitrogen hydrolase K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003064 274.0
BYD3_k127_8275467_3 AIR synthase related protein, C-terminal domain K01933 - 6.3.3.1 0.0000000000000000000000000000000000000005341 153.0
BYD3_k127_8319726_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 420.0
BYD3_k127_8319726_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 346.0
BYD3_k127_8319726_2 Ribosomal protein S21 K02970 - - 0.000000000000001066 78.0
BYD3_k127_8377280_0 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009394 384.0
BYD3_k127_8377280_1 beta' subunit K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 301.0
BYD3_k127_8377280_2 chromosome segregation K03497 - - 0.000000000000000000000000000000001348 141.0
BYD3_k127_8384200_0 Dioxygenase K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005444 278.0
BYD3_k127_8384200_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000004956 222.0
BYD3_k127_8384200_2 membrane - - - 0.00000000000000000000000000000000000000000000000000000005455 201.0
BYD3_k127_8396700_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 552.0
BYD3_k127_8396700_1 PFAM Type II secretion system protein E K02454,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 520.0
BYD3_k127_8396700_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005246 495.0
BYD3_k127_8396700_3 ABC-type transport system involved in lipoprotein release permease component K02004,K09808 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008104,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0034613,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0098796,GO:0098797,GO:1990778 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 333.0
BYD3_k127_8396700_4 Catalyzes the specific phosphorylation of arginine residues in proteins K19405 - 2.7.14.1 0.0000000000000000000000000000000000000000000000000000000000000000000001329 255.0
BYD3_k127_8396700_5 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051234,GO:0051641,GO:0055085,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0097159,GO:0097367,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1990778 - 0.0000000000000000000000000000000000000000000000000000000000001674 221.0
BYD3_k127_8396700_6 protein with conserved CXXC pairs K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 - 0.0000000000000000000000000000000000000000000007092 172.0
BYD3_k127_8423204_0 Glycosyl hydrolases family 2, TIM barrel domain K01190 - 3.2.1.23 4.592e-245 801.0
BYD3_k127_8423204_1 protoporphyrinogen oxidase activity K01854,K07011 - 5.4.99.9 2.544e-219 707.0
BYD3_k127_8423204_2 6-phospho-beta-galactosidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 425.0
BYD3_k127_8423204_3 Galactose-1-phosphate uridyl transferase, C-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 433.0
BYD3_k127_8423204_4 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 386.0
BYD3_k127_8423204_5 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 350.0
BYD3_k127_8525469_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007936 528.0
BYD3_k127_8525469_1 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244 - 1.4.1.1,4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 340.0
BYD3_k127_8525469_2 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 296.0
BYD3_k127_8525469_3 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000006735 235.0
BYD3_k127_8525469_4 B12 binding domain K22491 - - 0.000000000000000000000000000000000000000000006425 178.0
BYD3_k127_8525469_6 - - - - 0.000000000000000000005776 96.0
BYD3_k127_8525469_7 - - - - 0.000000000000000126 82.0
BYD3_k127_8525469_9 Pkd domain containing protein - - - 0.00000006086 66.0
BYD3_k127_8577898_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 GO:0003674,GO:0003824,GO:0004749,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 391.0
BYD3_k127_8577898_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000003718 185.0
BYD3_k127_8577898_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000002955 180.0
BYD3_k127_8619226_0 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 319.0
BYD3_k127_8619226_1 - - - - 0.000000000000000000000000000000000000000000000000000000009608 214.0
BYD3_k127_8619226_2 Calcineurin-like phosphoesterase - - - 0.000000000000000003771 99.0
BYD3_k127_8635228_0 Transglycosylase - - - 7.465e-194 640.0
BYD3_k127_8635228_1 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 492.0
BYD3_k127_8635228_2 Polysaccharide biosynthesis protein K17947 - 5.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005182 489.0
BYD3_k127_8635228_3 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000721 409.0
BYD3_k127_8635228_4 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000004033 188.0
BYD3_k127_8635228_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000074 117.0
BYD3_k127_8635228_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.0000000000000000000000002221 113.0
BYD3_k127_8635228_7 Male sterility protein K12454 - 5.1.3.10 0.0000000000000248 86.0
BYD3_k127_8652337_0 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000001485 246.0
BYD3_k127_8652337_1 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000000000000000000008622 160.0
BYD3_k127_8652337_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347,K03614 - 1.6.5.8 0.0000000002227 61.0
BYD3_k127_8734635_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003717 367.0
BYD3_k127_8734635_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000003981 196.0
BYD3_k127_8734635_2 response regulator receiver K07658,K07668 - - 0.0000000000000000000000000000000009809 134.0
BYD3_k127_8736901_0 Peptidase family M3 K01392 - 3.4.24.15 9.063e-202 653.0
BYD3_k127_8736901_1 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009245 595.0
BYD3_k127_8736901_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 534.0
BYD3_k127_8736901_3 Lipase maturation factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 469.0
BYD3_k127_8736901_4 Phosphate transporter family K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 424.0
BYD3_k127_8736901_5 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000002677 192.0
BYD3_k127_8736901_6 OsmC-like protein K04063 - - 0.0000000000000000000000000000000000000000000000001488 182.0
BYD3_k127_8736901_7 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000007938 161.0
BYD3_k127_8736901_8 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000005067 136.0
BYD3_k127_8763039_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 472.0
BYD3_k127_8763039_1 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 332.0
BYD3_k127_8763039_2 SpoIVB peptidase S55 K00973,K02414,K21449 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000001596 273.0
BYD3_k127_8763039_3 GGDEF domain - - - 0.000003042 59.0
BYD3_k127_8778422_0 Cys/Met metabolism PLP-dependent enzyme K00639 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 486.0
BYD3_k127_8778422_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000003689 171.0
BYD3_k127_8778422_2 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.000001612 50.0
BYD3_k127_8783373_0 Protein of unknown function (DUF2723) K16928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 392.0
BYD3_k127_8783373_1 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 334.0
BYD3_k127_8783373_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036 318.0
BYD3_k127_8783373_3 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001129 288.0
BYD3_k127_8783373_4 PFAM NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000001365 274.0
BYD3_k127_8783373_5 methyltransferase - - - 0.000000000000000000000000000000000000000000000000063 185.0
BYD3_k127_8783373_6 Glycosyl transferase family group 2 K07011 - - 0.00000000000000000000000000000000000000003616 172.0
BYD3_k127_8783373_7 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000001689 122.0
BYD3_k127_8783373_8 lysyltransferase activity K07027 - - 0.0000000000000000000000001625 123.0
BYD3_k127_8795553_0 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000003857 220.0
BYD3_k127_8795553_1 Belongs to the peptidase S8 family - - - 0.0000000000000001375 81.0
BYD3_k127_8795553_2 long-chain fatty acid transporting porin activity K06076 - - 0.00000000000005516 86.0
BYD3_k127_8796244_0 Sugar ABC transporter permease K10109,K15770,K15771 - - 4.841e-201 646.0
BYD3_k127_8796244_1 Binding-protein-dependent transport system inner membrane component K10110,K15772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003357 452.0
BYD3_k127_8809136_0 Oligoendopeptidase f - - - 5.809e-208 666.0
BYD3_k127_8809136_1 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009962 330.0
BYD3_k127_8809136_2 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 304.0
BYD3_k127_8809136_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006331 280.0
BYD3_k127_8809136_4 Sortase and related acyltransferases K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000000000000000001384 220.0
BYD3_k127_8809136_5 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000000000003202 169.0
BYD3_k127_8809136_6 ketosteroid isomerase - - - 0.000000000000000000000000001183 119.0
BYD3_k127_8809136_7 Cupin 2, conserved barrel domain protein - - - 0.000000001734 58.0
BYD3_k127_8852186_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 392.0
BYD3_k127_8852186_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008838 353.0
BYD3_k127_8852186_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000002625 276.0
BYD3_k127_8852186_3 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000105 280.0
BYD3_k127_8852186_4 Belongs to the MurCDEF family K01924 GO:0000166,GO:0000270,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0035639,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0046872,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.8 0.00000000000000000000000000000004039 130.0
BYD3_k127_8920437_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 1.335e-301 938.0
BYD3_k127_8920437_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005151 543.0
BYD3_k127_8920437_2 smart pdz dhr glgf K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009019 379.0
BYD3_k127_8920437_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 375.0
BYD3_k127_8920437_4 Alpha beta hydrolase fold protein - - - 0.0000000000000000000000000000000000000004105 162.0
BYD3_k127_8920437_5 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.0000000000000000000000000247 117.0
BYD3_k127_8920437_6 efflux transmembrane transporter activity K12340 - - 0.00000000001273 78.0
BYD3_k127_8940747_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 3.935e-292 919.0
BYD3_k127_8940747_1 asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 360.0
BYD3_k127_8940747_2 Glycosyl hydrolase family 57 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 334.0
BYD3_k127_8940747_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001382 278.0
BYD3_k127_8940747_4 Psort location CytoplasmicMembrane, score - - - 0.000000002333 64.0
BYD3_k127_8940747_5 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.00000004277 65.0
BYD3_k127_894659_0 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.00000000000000000000000007349 109.0
BYD3_k127_894659_1 Phosphatase - - - 0.0000000000000009496 91.0
BYD3_k127_8948118_0 Major facilitator Superfamily K08217 - - 0.00000000000000000000000000000000000000000000000000000000008592 222.0
BYD3_k127_8948118_1 Flavodoxin-like fold K00355 - 1.6.5.2 0.000000000000003748 76.0
BYD3_k127_8948118_2 Major facilitator Superfamily K08217 - - 0.00000000000001885 83.0
BYD3_k127_8948118_3 SMART regulatory protein, ArsR - - - 0.00000000004198 72.0
BYD3_k127_8948966_0 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007133 314.0
BYD3_k127_8948966_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000009142 220.0
BYD3_k127_8948966_2 PFAM thioesterase superfamily - - - 0.000000000000000000000000000000000000000000001442 169.0
BYD3_k127_8948966_3 protein with SCP PR1 domains - - - 0.000000000000000000000001666 111.0
BYD3_k127_8950802_0 Glycosyltransferase family 20 K16055 - 2.4.1.15,3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 466.0
BYD3_k127_8950802_1 Glycosyl transferases group 1 K13057 - 2.4.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006858 410.0
BYD3_k127_8950802_10 energy transducer activity K00700,K03832 - 2.4.1.18 0.000003084 59.0
BYD3_k127_8950802_11 ompA family - - - 0.000006866 58.0
BYD3_k127_8950802_12 Belongs to the glycosyl hydrolase 57 family - - - 0.00009331 53.0
BYD3_k127_8950802_2 CDP-alcohol phosphatidyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002002 239.0
BYD3_k127_8950802_3 Radical SAM superfamily K06871 - - 0.0000000000000000000000000000000000000000000006633 173.0
BYD3_k127_8950802_4 MotA TolQ ExbB proton channel family K03561 - - 0.00000000000000000000002484 108.0
BYD3_k127_8950802_5 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000009295 110.0
BYD3_k127_8950802_6 Biopolymer transport protein K03560 - - 0.00000000001114 70.0
BYD3_k127_8950802_7 Conserved TM helix - - - 0.000000001123 68.0
BYD3_k127_8950802_8 Tetratricopeptide repeat - - - 0.000000478 63.0
BYD3_k127_8950802_9 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000005936 57.0
BYD3_k127_8969189_0 Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 1.76e-225 727.0
BYD3_k127_8969189_1 alginic acid biosynthetic process K07218 - - 0.00000000000000000000000000000000000000000000000000000000000002603 244.0
BYD3_k127_8969189_2 ABC transporter K01990,K19340 - - 0.00000000000000000000000000000000000000000000000008775 202.0
BYD3_k127_8969189_3 lipoprotein involved in nitrous oxide reduction K19342 - - 0.000000000000000000000000000000000001389 147.0
BYD3_k127_8969189_4 NnrS protein K07234 - - 0.00000000000000000000000000000006043 144.0
BYD3_k127_8969189_5 Transcriptional regulator, Crp Fnr family K01420,K21564 - - 0.00000000000000000000000000003762 130.0
BYD3_k127_8969189_6 ABC-2 family transporter protein K01992,K19341 - - 0.0000000000000000000000000007585 127.0
BYD3_k127_8969189_7 Cytochrome c - - - 0.000000000000003752 87.0
BYD3_k127_8969189_8 lipoprotein involved in nitrous oxide reduction - - - 0.000000001278 66.0
BYD3_k127_8969189_9 Hemerythrin HHE cation binding domain - - - 0.00000002126 63.0
BYD3_k127_8979103_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006307 282.0
BYD3_k127_8979103_1 PFAM Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000001195 184.0
BYD3_k127_8979103_2 MafB19-like deaminase K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000000001512 181.0
BYD3_k127_8979103_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000009382 94.0
BYD3_k127_8979103_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000004509 92.0
BYD3_k127_8979103_5 Resolvase - - - 0.0000008183 57.0
BYD3_k127_8979103_6 Recombinase zinc beta ribbon domain K06400 - - 0.00005667 50.0
BYD3_k127_8979103_8 Putative bacterial lipoprotein (DUF799) - - - 0.0001991 51.0
BYD3_k127_8981419_1 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000001692 78.0
BYD3_k127_900742_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000001033 170.0
BYD3_k127_900742_1 Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily K03615 - - 0.00000000000000000000000000000000000002737 151.0
BYD3_k127_900742_2 Pyruvate flavodoxin ferredoxin oxidoreductase, thiamine diP-binding domain protein K00169 - 1.2.7.1 0.00000000000000000000000000000007653 144.0
BYD3_k127_900742_3 F420-non-reducing hydrogenase K03616 - - 0.0001715 54.0
BYD3_k127_900742_4 Divergent 4Fe-4S mono-cluster K05337 - - 0.0002689 46.0
BYD3_k127_9062818_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1161.0
BYD3_k127_9062818_1 COGs COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 353.0
BYD3_k127_9062818_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007784 311.0
BYD3_k127_9062818_3 lipoprotein transporter activity K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008425 323.0
BYD3_k127_9062818_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 304.0
BYD3_k127_9062818_5 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000001048 130.0
BYD3_k127_9062818_6 endonuclease activity K07451 - - 0.0000000000000000004605 97.0
BYD3_k127_9062818_7 outer membrane efflux protein - - - 0.0000000000473 73.0
BYD3_k127_922583_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 4.235e-205 661.0
BYD3_k127_922583_1 Ribonuclease E/G family K08301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 520.0
BYD3_k127_922583_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 382.0
BYD3_k127_922583_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006946 370.0
BYD3_k127_922583_4 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000001284 279.0
BYD3_k127_922583_5 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000004374 214.0
BYD3_k127_922583_6 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000005348 124.0
BYD3_k127_922583_7 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000001036 91.0
BYD3_k127_922583_8 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0006241 51.0
BYD3_k127_956456_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.103e-259 856.0
BYD3_k127_956456_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 429.0
BYD3_k127_956456_2 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004282 326.0
BYD3_k127_956456_3 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000002411 222.0
BYD3_k127_956456_4 Aerotolerance regulator N-terminal - - - 0.000000000000000000000000000002896 139.0
BYD3_k127_973396_0 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 349.0
BYD3_k127_973396_1 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000006413 237.0
BYD3_k127_973396_2 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000004865 166.0
BYD3_k127_973396_3 Glycosyl transferases group 1 - - - 0.000000006821 64.0