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Overview

ID MAG00123
Name BYD3_bin.36
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Blastocatellia
Order UBA7656
Family UBA7656
Genus DASTET01
Species DASTET01 sp035709445
Assembly information
Completeness (%) 93.9
Contamination (%) 2.41
GC content (%) 58.0
N50 (bp) 5,470
Genome size (bp) 5,398,610

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes4633

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1012473_0 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 321.0
BYD3_k127_1012473_1 NUDIX domain - - - 0.000000000001008 75.0
BYD3_k127_1025468_0 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 370.0
BYD3_k127_1025468_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000289 187.0
BYD3_k127_1025468_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000392 136.0
BYD3_k127_1025468_3 Putative zinc-finger - - - 0.0001576 49.0
BYD3_k127_1031345_0 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000008839 181.0
BYD3_k127_1031345_1 PFAM Polysaccharide deacetylase - - - 0.000000000000000000000000000000000112 141.0
BYD3_k127_1031345_2 Polysaccharide biosynthesis protein - - - 0.00005907 49.0
BYD3_k127_1036016_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000007508 187.0
BYD3_k127_1036016_1 HAD-hyrolase-like K07025 - - 0.000000000000000000000000000001218 130.0
BYD3_k127_1036016_2 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000002141 99.0
BYD3_k127_1055609_0 Multicopper oxidase K22348 - 1.16.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003957 495.0
BYD3_k127_1055609_1 Outer membrane efflux protein K15725 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004648 314.0
BYD3_k127_106661_0 methylmalonyl-CoA mutase C-terminal K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000004128 208.0
BYD3_k127_106661_1 N-Acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000007252 200.0
BYD3_k127_1092781_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 573.0
BYD3_k127_1095366_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000085 171.0
BYD3_k127_1095366_1 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000001421 160.0
BYD3_k127_1099248_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 3.303e-250 782.0
BYD3_k127_1099248_1 Acyclic terpene utilisation family protein AtuA - - - 1.738e-207 653.0
BYD3_k127_1099248_10 PFAM Iron sulphur-containing domain, CDGSH-type - - - 0.00000000000000000000000002366 109.0
BYD3_k127_1099248_2 Domain of unknown function (DUF4394) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 465.0
BYD3_k127_1099248_3 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 397.0
BYD3_k127_1099248_4 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000001575 267.0
BYD3_k127_1099248_5 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000003598 225.0
BYD3_k127_1099248_6 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000001717 200.0
BYD3_k127_1099248_7 - - - - 0.00000000000000000000000000000000000000001048 156.0
BYD3_k127_1099248_8 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000006414 161.0
BYD3_k127_1099248_9 Uncharacterized protein family UPF0016 - - - 0.00000000000000000000000001513 111.0
BYD3_k127_1101315_0 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 504.0
BYD3_k127_11026_0 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000006832 83.0
BYD3_k127_11026_1 lysine biosynthetic process via aminoadipic acid - - - 0.000003312 54.0
BYD3_k127_1110342_0 7TM-HD extracellular K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000843 432.0
BYD3_k127_1110342_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 301.0
BYD3_k127_1110342_2 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001146 241.0
BYD3_k127_1110342_3 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000001406 187.0
BYD3_k127_1110342_4 PFAM PhoH family protein K06217 - - 0.00000000000000000000000000000000003704 135.0
BYD3_k127_1110342_5 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000004738 110.0
BYD3_k127_1110342_6 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K01489,K07042 - 3.5.4.5 0.0000000000000000000000211 106.0
BYD3_k127_1117912_0 Trehalose utilisation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001461 268.0
BYD3_k127_1117912_1 Trehalose utilisation - - - 0.0000000000000000000000000000000000000000000000004306 188.0
BYD3_k127_1118046_0 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000975 491.0
BYD3_k127_1118046_1 Permease family K06901 GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006863,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015205,GO:0015207,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0015851,GO:0015853,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:0098655,GO:0098660,GO:0098662,GO:1902600,GO:1904823 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 443.0
BYD3_k127_1118046_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 432.0
BYD3_k127_1118046_3 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 386.0
BYD3_k127_1118046_4 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 349.0
BYD3_k127_1118046_5 Protein of unknown function (DUF2905) - - - 0.000000000000000000001137 96.0
BYD3_k127_1118046_6 AMP binding - - - 0.00000000000007685 77.0
BYD3_k127_1131345_0 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 446.0
BYD3_k127_1131345_1 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000003068 229.0
BYD3_k127_1131345_2 Forkhead associated domain - - - 0.0000000000000000003478 89.0
BYD3_k127_1134024_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 430.0
BYD3_k127_1134024_2 Belongs to the CinA family K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003986 361.0
BYD3_k127_1134024_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969,K03574 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18,3.6.1.55 0.000000000002556 77.0
BYD3_k127_1137767_0 aminoacyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 364.0
BYD3_k127_1137767_1 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000001394 239.0
BYD3_k127_1137767_2 Diguanylate cyclase, GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000007553 214.0
BYD3_k127_1137767_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000003639 175.0
BYD3_k127_1137767_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000001173 177.0
BYD3_k127_1139145_0 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.000000000000000000000000000000000000003728 159.0
BYD3_k127_1139145_1 Domain of unknown function (DUF4384) - - - 0.0000000000002803 79.0
BYD3_k127_1139145_2 Domain of unknown function (DUF4384) - - - 0.0000000002435 70.0
BYD3_k127_1156687_0 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 402.0
BYD3_k127_1156687_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000002399 217.0
BYD3_k127_1156687_2 response to copper ion K01187,K16915 - 3.2.1.20 0.0000000000000000000000000002006 123.0
BYD3_k127_1156687_3 Multicopper oxidase - - - 0.0001693 51.0
BYD3_k127_1158607_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003324 275.0
BYD3_k127_1158607_1 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000003307 186.0
BYD3_k127_1159382_0 domain protein - - - 4.811e-277 869.0
BYD3_k127_1159382_1 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001067 259.0
BYD3_k127_1161933_0 - - - - 0.0000000000000000001363 94.0
BYD3_k127_1161933_1 N-6 DNA Methylase - - - 0.000000000002061 78.0
BYD3_k127_116857_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1130.0
BYD3_k127_116857_1 ASPIC and UnbV - - - 5.891e-255 797.0
BYD3_k127_116857_10 D-glucuronyl C5-epimerase C-terminus - - - 0.000121 53.0
BYD3_k127_116857_11 Transglutaminase/protease-like homologues - - - 0.0006871 51.0
BYD3_k127_116857_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 594.0
BYD3_k127_116857_3 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007183 485.0
BYD3_k127_116857_4 bacterial-type flagellum-dependent cell motility - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 396.0
BYD3_k127_116857_5 Pyridoxal-phosphate dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 382.0
BYD3_k127_116857_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 323.0
BYD3_k127_116857_7 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003776 260.0
BYD3_k127_116857_8 Pfam Amidohydrolase - - - 0.0000000000000000000000000000000000000000004439 162.0
BYD3_k127_1174248_0 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000006469 211.0
BYD3_k127_1174248_1 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.00000000000000002173 82.0
BYD3_k127_1174248_2 Histidine triad (HIT) protein K02503 - - 0.0000000003727 60.0
BYD3_k127_1183190_0 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 391.0
BYD3_k127_1183190_1 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000002076 201.0
BYD3_k127_1183190_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000003427 164.0
BYD3_k127_1203896_0 PFAM sodium calcium exchanger membrane region K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009144 280.0
BYD3_k127_1203896_1 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002453 279.0
BYD3_k127_1203896_2 Bacteriocin-protection, YdeI or OmpD-Associated K06878 - - 0.0000000000000000000000000000000000000000001281 165.0
BYD3_k127_1203896_3 - - - - 0.00000000000000000000000004222 112.0
BYD3_k127_1205963_0 C-terminal, D2-small domain, of ClpB protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 406.0
BYD3_k127_1205963_1 Metallo-beta-lactamase superfamily K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006957 277.0
BYD3_k127_1205963_2 Permease - GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.0000000000000000000000000000000001148 147.0
BYD3_k127_1205963_3 Cellulose biosynthesis protein BcsQ K03496 - - 0.000000000000000000009067 98.0
BYD3_k127_1205963_4 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.00000000000005434 79.0
BYD3_k127_1210516_0 Aromatic amino acid lyase K01745 - 4.3.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 378.0
BYD3_k127_1212859_0 COGs COG0471 Di- and tricarboxylate transporter - - - 9.906e-207 659.0
BYD3_k127_1212859_1 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 428.0
BYD3_k127_1212859_2 Dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006799 294.0
BYD3_k127_1212859_3 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.000000000000000000000000000000000000000000000000000000000000000001026 236.0
BYD3_k127_1214377_0 ZIP Zinc transporter K07238,K11021,K16267 - - 0.0000000000000000000000000000000000000000000000000000000000004782 220.0
BYD3_k127_1214377_1 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000000003522 144.0
BYD3_k127_1214377_2 Methanol dehydrogenase K06872 - - 0.00000000000000001057 91.0
BYD3_k127_122875_0 PFAM DnaJ homologue, subfamily C, member 28, conserved domain - - - 0.000000000000000000002283 98.0
BYD3_k127_122875_1 - - - - 0.0005777 48.0
BYD3_k127_1230481_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000005176 144.0
BYD3_k127_1230481_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000002141 93.0
BYD3_k127_1233992_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000002271 83.0
BYD3_k127_1233992_1 cytochrome c K00405,K07245 - - 0.000000000001943 74.0
BYD3_k127_1236661_0 PFAM Type II secretion system protein E K02652 - - 4.415e-212 673.0
BYD3_k127_1236661_1 Type II secretion system (T2SS), protein F K02455,K02653 - - 0.00000000000000000000000000000000000000006523 160.0
BYD3_k127_1236661_2 Belongs to the GSP D family K02453 - - 0.00000000000000000000000000000000000001289 163.0
BYD3_k127_1238736_0 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 310.0
BYD3_k127_1238736_1 peptide deformylase activity K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000001642 225.0
BYD3_k127_1238736_2 Protein of unknown function (DUF1800) - - - 0.000000000000000000000003781 108.0
BYD3_k127_1238736_3 Protein of unknown function (DUF1800) - - - 0.00000000000001224 80.0
BYD3_k127_1240277_0 PFAM peptidase - - - 5.742e-206 653.0
BYD3_k127_1240277_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000004795 244.0
BYD3_k127_1240277_2 deoxyhypusine monooxygenase activity K05385 - - 0.000000000000000000000000000000000000000000787 172.0
BYD3_k127_1240277_3 peptidase S1 and S6, chymotrypsin Hap K01337 - 3.4.21.50 0.0000000000000000000000000000394 123.0
BYD3_k127_1240277_4 Metallo-peptidase family M12 - - - 0.00000000000000007174 89.0
BYD3_k127_1240277_5 NHL repeat - - - 0.0000002796 60.0
BYD3_k127_1240277_6 deoxyhypusine monooxygenase activity - - - 0.000000338 58.0
BYD3_k127_1240277_7 Trypsin-like serine protease K01337 - 3.4.21.50 0.0000122 50.0
BYD3_k127_1242324_0 protein trimerization K07114,K08309 - - 0.0000000000000000000000000008306 130.0
BYD3_k127_1242595_0 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006076 374.0
BYD3_k127_1242595_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 299.0
BYD3_k127_1242595_2 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000006614 250.0
BYD3_k127_1242595_3 Peptidase, M16 K07263 - - 0.0000000000000000000000000000000427 135.0
BYD3_k127_1242595_4 cAMP biosynthetic process - - - 0.00000934 48.0
BYD3_k127_1244463_0 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009377 352.0
BYD3_k127_1244463_1 PFAM regulatory protein TetR K13770 - - 0.0000000000000000000000000000000000000000000000000122 188.0
BYD3_k127_1244463_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.00001201 56.0
BYD3_k127_1244463_3 response regulator, receiver - - - 0.00002869 54.0
BYD3_k127_1250316_0 Ig-like domain from next to BRCA1 gene - - - 0.000000002582 70.0
BYD3_k127_1250316_1 Matrixin - - - 0.000002692 60.0
BYD3_k127_1250462_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001137 259.0
BYD3_k127_1251207_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 488.0
BYD3_k127_1251207_1 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.0000000000000000000002196 99.0
BYD3_k127_1251207_2 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000006251 76.0
BYD3_k127_1251605_0 TonB dependent receptor K16091 - - 3.123e-209 676.0
BYD3_k127_1251605_1 Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 333.0
BYD3_k127_1251605_3 Polysaccharide deacetylase - - - 0.0000000000000000000009085 107.0
BYD3_k127_1251605_4 zinc-ribbon domain - - - 0.00002397 49.0
BYD3_k127_1253361_0 Prolyl oligopeptidase family - - - 2.633e-233 742.0
BYD3_k127_1253361_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 589.0
BYD3_k127_1253361_10 Guanylyl transferase CofC like K14941 - 2.7.7.68 0.000000000000000000000000000008336 128.0
BYD3_k127_1253361_11 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000004015 66.0
BYD3_k127_1253361_12 Radical SAM K11781 - 2.5.1.77 0.00000004023 57.0
BYD3_k127_1253361_2 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 545.0
BYD3_k127_1253361_3 Elongator protein 3, MiaB family, Radical SAM K11779 - 2.5.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 448.0
BYD3_k127_1253361_4 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 330.0
BYD3_k127_1253361_5 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001162 287.0
BYD3_k127_1253361_6 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001643 278.0
BYD3_k127_1253361_7 oxidoreductase activity - - - 0.0000000000000000000000000000000000000004708 169.0
BYD3_k127_1253361_8 PFAM pyridoxamine 5'-phosphate oxidase-related - - - 0.00000000000000000000000000000000000006687 147.0
BYD3_k127_1253361_9 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000001085 150.0
BYD3_k127_1253467_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007752 285.0
BYD3_k127_1253467_1 Glycosyl transferase family 2 K16870 - 2.4.1.289 0.0000000000000000000000000000000000000000000000000000000000000008937 233.0
BYD3_k127_1253467_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000004931 75.0
BYD3_k127_1257684_0 Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 409.0
BYD3_k127_1257684_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000125 119.0
BYD3_k127_1269726_0 WD-40 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 528.0
BYD3_k127_1269726_1 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 501.0
BYD3_k127_1269726_2 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008327 343.0
BYD3_k127_1269726_3 Domain of unknown function (DUF4956) - - - 0.00000000014 73.0
BYD3_k127_1274633_0 COG2059 Chromate transport protein ChrA K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 455.0
BYD3_k127_1274633_1 Alpha-aspartyl dipeptidase-like K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.0000000000000000000001336 100.0
BYD3_k127_1274633_2 Chromate resistance exported protein - - - 0.00000000000134 71.0
BYD3_k127_1279509_0 ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005501 272.0
BYD3_k127_1279509_1 Forkhead associated domain - - - 0.00000000000000000000000000000000000002943 158.0
BYD3_k127_1279509_2 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000003101 98.0
BYD3_k127_128283_0 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000004412 212.0
BYD3_k127_128283_1 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000003389 123.0
BYD3_k127_128283_2 dTDP biosynthetic process K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000267 62.0
BYD3_k127_128509_0 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 420.0
BYD3_k127_128509_1 Multicopper oxidase - - - 0.0000000002481 61.0
BYD3_k127_1320772_0 transport - - - 0.000000000000000000000000000000003837 142.0
BYD3_k127_1325826_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07239,K07787,K15726 GO:0000041,GO:0003674,GO:0005215,GO:0005375,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0006873,GO:0006875,GO:0006878,GO:0006950,GO:0008150,GO:0008324,GO:0009636,GO:0009987,GO:0010035,GO:0010038,GO:0010272,GO:0010273,GO:0015075,GO:0015080,GO:0015318,GO:0015673,GO:0015679,GO:0016020,GO:0016021,GO:0019725,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0031224,GO:0034220,GO:0035434,GO:0042221,GO:0042592,GO:0043167,GO:0043169,GO:0044425,GO:0044464,GO:0046688,GO:0046872,GO:0046873,GO:0046914,GO:0046915,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0055065,GO:0055070,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0060003,GO:0061687,GO:0065007,GO:0065008,GO:0071944,GO:0097501,GO:0098655,GO:0098660,GO:0098662,GO:0098754,GO:0098771,GO:1902601,GO:1990169 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 527.0
BYD3_k127_1325826_1 His Kinase A (phosphoacceptor) domain K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 469.0
BYD3_k127_1325826_2 Protein conserved in bacteria K20274 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002348 303.0
BYD3_k127_1325826_3 Transcriptional regulator, LysR family - - - 0.00000000000000000000000000000000000000000000001734 182.0
BYD3_k127_1325826_4 COG1538 Outer membrane protein K15725 - - 0.00000000000000000000001051 116.0
BYD3_k127_1325826_5 COG0845 Membrane-fusion protein K15727 - - 0.0000000000000001484 93.0
BYD3_k127_1338247_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 556.0
BYD3_k127_1338247_1 Uncharacterised protein family UPF0047 - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000001443 96.0
BYD3_k127_1338247_3 nuclear chromosome segregation - - - 0.000001295 62.0
BYD3_k127_1342006_0 Protein of unknown function, DUF255 K06888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 458.0
BYD3_k127_1349081_0 transcriptional regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 319.0
BYD3_k127_1349081_1 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000000000000002725 179.0
BYD3_k127_1349081_2 phosphorelay signal transduction system - - - 0.000000000000000003707 98.0
BYD3_k127_1349081_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000003578 88.0
BYD3_k127_1349081_4 dnaJ homolog subfamily C member 25 K19371 - - 0.000000002186 70.0
BYD3_k127_135200_0 sulfate ABC transporter K02047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003734 257.0
BYD3_k127_135200_1 ATPase activity K02045 - 3.6.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000002517 243.0
BYD3_k127_135200_2 phosphate-selective porin O and P K07221 - - 0.000000000000000000000000000000000000000000000000000000000001415 231.0
BYD3_k127_1356938_0 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 340.0
BYD3_k127_1356938_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000007709 77.0
BYD3_k127_1359354_0 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001556 276.0
BYD3_k127_1359354_1 Represses a number of genes involved in the response to DNA damage (SOS response) K01356,K03503 - 3.4.21.88 0.0000000000000000000000000000000000000000000000002595 184.0
BYD3_k127_1359354_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage - - - 0.0000000000005499 76.0
BYD3_k127_1361049_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003674 347.0
BYD3_k127_1361049_1 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 310.0
BYD3_k127_1365152_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000711 75.0
BYD3_k127_1365152_1 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000002052 55.0
BYD3_k127_1367056_0 transferase activity, transferring glycosyl groups K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 376.0
BYD3_k127_1367056_1 xylanase chitin deacetylase - - - 0.000000000000000000000000000000000000000000000000001773 196.0
BYD3_k127_1367056_2 protein methyltransferase activity K00568,K02687 - 2.1.1.222,2.1.1.64 0.000000000000000000000001901 106.0
BYD3_k127_1367056_3 Polysaccharide deacetylase - - - 0.0000000000000000001106 99.0
BYD3_k127_1367056_4 FtsX-like permease family - - - 0.00000002535 55.0
BYD3_k127_1384007_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003842 348.0
BYD3_k127_1391579_0 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 368.0
BYD3_k127_1391579_1 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000001219 234.0
BYD3_k127_1391579_2 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000009626 135.0
BYD3_k127_139785_0 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000003341 131.0
BYD3_k127_1403785_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 547.0
BYD3_k127_1403785_1 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002677 241.0
BYD3_k127_1418108_0 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 384.0
BYD3_k127_1418108_1 - - - - 0.00000000000000000000000000000000000000003619 159.0
BYD3_k127_1418108_2 PFAM Nicotinamide mononucleotide transporter PnuC K03811 - - 0.0000000000000001536 87.0
BYD3_k127_1418242_0 TIGRFAM threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 359.0
BYD3_k127_1418242_1 ATPase activity - - - 0.000000000000000000000000000006431 133.0
BYD3_k127_1419311_0 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 GO:0000287,GO:0003674,GO:0003824,GO:0004016,GO:0004383,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006182,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007186,GO:0007187,GO:0007188,GO:0007189,GO:0008074,GO:0008150,GO:0008152,GO:0008179,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009975,GO:0009987,GO:0010033,GO:0014070,GO:0016020,GO:0016021,GO:0016829,GO:0016849,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019899,GO:0019932,GO:0019933,GO:0019935,GO:0023052,GO:0030145,GO:0030425,GO:0031224,GO:0031226,GO:0031683,GO:0032991,GO:0033993,GO:0034641,GO:0034654,GO:0035556,GO:0035690,GO:0036477,GO:0042221,GO:0042493,GO:0042995,GO:0043005,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044444,GO:0044445,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045121,GO:0046058,GO:0046068,GO:0046390,GO:0046483,GO:0046677,GO:0046872,GO:0046914,GO:0046982,GO:0046983,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052652,GO:0055086,GO:0061478,GO:0065007,GO:0070887,GO:0071236,GO:0071310,GO:0071396,GO:0071407,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0097305,GO:0097306,GO:0097447,GO:0097458,GO:0098589,GO:0098805,GO:0098857,GO:0120025,GO:0120038,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901654,GO:1901655,GO:1901700,GO:1901701,GO:1904321,GO:1904322 4.6.1.1 0.0000000000000003243 91.0
BYD3_k127_1419311_1 Sigma-54 interaction domain - - - 0.00000000005006 75.0
BYD3_k127_1425525_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000001412 196.0
BYD3_k127_1425525_1 Tfp pilus assembly protein FimV - - - 0.0000000000000005467 86.0
BYD3_k127_1429045_0 Glutamate-cysteine ligase family 2(GCS2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 488.0
BYD3_k127_1430594_0 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 1.726e-226 712.0
BYD3_k127_1430594_1 benzoyl-CoA reductase K04112 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000004479 267.0
BYD3_k127_1430594_2 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004587 261.0
BYD3_k127_1430594_3 NAD dependent epimerase/dehydratase family K07535 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007832 250.0
BYD3_k127_1430594_4 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004768 241.0
BYD3_k127_1430594_5 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.000000000000000000000000000000000000000000004127 174.0
BYD3_k127_1430594_6 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.0000007732 52.0
BYD3_k127_1430594_7 GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity K13669 GO:0000026,GO:0000030,GO:0003674,GO:0003824,GO:0004376,GO:0004377,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0043750,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0070085,GO:0071704,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.0000009784 61.0
BYD3_k127_144427_0 Putative Ig domain - - - 0.000000000000000000000000000000000000000000000005484 187.0
BYD3_k127_1445304_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000008138 194.0
BYD3_k127_1447162_0 Prolyl oligopeptidase K01322 - 3.4.21.26 0.00000000000000000000000000000000000000000000000000001425 198.0
BYD3_k127_1447162_1 - - - - 0.0000000000000000000000005668 111.0
BYD3_k127_1457203_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1084.0
BYD3_k127_1457203_1 COG0491 Zn-dependent hydrolases, including glyoxylases K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000004946 254.0
BYD3_k127_1457203_2 PFAM Protein kinase domain - - - 0.000000000000000000000000000000000000000000003717 171.0
BYD3_k127_1457203_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000002165 166.0
BYD3_k127_1457203_4 Periplasmic copper-binding protein (NosD) K10297 - - 0.00000000000000000000000000000000000003801 151.0
BYD3_k127_1457203_5 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000009675 93.0
BYD3_k127_1457203_6 Transposase K07494 - - 0.0000000000000267 77.0
BYD3_k127_145749_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005865 523.0
BYD3_k127_145749_1 Transcriptional regulator K07013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002074 277.0
BYD3_k127_145749_2 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004651 245.0
BYD3_k127_145749_3 - - - - 0.0002154 52.0
BYD3_k127_1494554_0 hydrolase, family 3 K05349 - 3.2.1.21 8.414e-264 821.0
BYD3_k127_1510155_0 Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000533 365.0
BYD3_k127_1513639_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006045 337.0
BYD3_k127_1513639_1 TrkA-C domain K03499 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000007921 181.0
BYD3_k127_1513639_2 diguanylate cyclase - - - 0.000000000000000000000000000000000000000002688 168.0
BYD3_k127_1513639_3 Putative NAD(P)-binding K03499 - - 0.0000000000000000000001336 111.0
BYD3_k127_1513639_4 Putative glutamine amidotransferase - - - 0.0000000000000000000007516 111.0
BYD3_k127_1513639_5 Sigma-70 region 2 K03088 - - 0.000000000000000000001004 98.0
BYD3_k127_1513639_6 cheY-homologous receiver domain - - - 0.000000000000000000001198 100.0
BYD3_k127_151997_0 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 GO:0000302,GO:0001101,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0016491,GO:0016667,GO:0016672,GO:0016675,GO:0019538,GO:0030091,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0043170,GO:0043546,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0048037,GO:0050662,GO:0050896,GO:0055114,GO:0071704,GO:0097159,GO:1901363,GO:1901530,GO:1901564,GO:1901700 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009499 415.0
BYD3_k127_151997_1 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.0000000000000000000000000000000000000000000000000000000002656 208.0
BYD3_k127_1535211_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1045.0
BYD3_k127_1535211_1 Type IV pilus assembly protein PilM; K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199 323.0
BYD3_k127_1535211_2 Belongs to the PEP-utilizing enzyme family K01006,K01007 - 2.7.9.1,2.7.9.2 0.00000000000000000000341 94.0
BYD3_k127_1535211_3 Pilus assembly protein, PilO K02664 - - 0.00009655 52.0
BYD3_k127_1535562_0 Response regulator receiver - - - 3.388e-207 653.0
BYD3_k127_1535562_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 409.0
BYD3_k127_1535562_2 PFAM ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 355.0
BYD3_k127_1543847_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000000000000000000001131 125.0
BYD3_k127_155919_0 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009507 327.0
BYD3_k127_155919_1 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000002512 232.0
BYD3_k127_1562514_0 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008007 329.0
BYD3_k127_1563141_0 C-terminal, D2-small domain, of ClpB protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001984 256.0
BYD3_k127_1563141_1 Stage II sporulation protein K06381 - - 0.0000000000000000000000000000000000003438 155.0
BYD3_k127_1563141_2 SNARE associated Golgi protein - - - 0.00000000000000000004929 98.0
BYD3_k127_1564535_0 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000002232 143.0
BYD3_k127_1564535_1 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000005172 135.0
BYD3_k127_1564535_2 domain, Protein - - - 0.000000000000008128 87.0
BYD3_k127_1564535_3 Protein of unknown function (DUF3108) - - - 0.00000000000001983 85.0
BYD3_k127_1567872_0 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000001567 154.0
BYD3_k127_1567872_1 M6 family metalloprotease domain protein - - - 0.0000003572 56.0
BYD3_k127_1589000_0 Phosphate transporter family K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 396.0
BYD3_k127_1589000_1 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000007679 205.0
BYD3_k127_1594980_0 PFAM PEGA domain - - - 0.000001359 60.0
BYD3_k127_1595696_0 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 435.0
BYD3_k127_161861_0 Psort location CytoplasmicMembrane, score - - - 0.00000000000000001934 94.0
BYD3_k127_1628664_0 Alginate export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 366.0
BYD3_k127_1628664_1 Protein conserved in bacteria - - - 0.0000000000000003142 79.0
BYD3_k127_1629555_0 Hydrogenase maturation protease K03605 - - 0.00000000000000000000000000000000000000000000000009552 182.0
BYD3_k127_1629555_1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA K04651 - - 0.00000000000000000000000368 102.0
BYD3_k127_1629555_2 spore germination K03605 - - 0.000000000000000001016 86.0
BYD3_k127_1629555_3 YceI-like domain - - - 0.00000000000001247 81.0
BYD3_k127_1634295_0 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007434 488.0
BYD3_k127_1651357_0 - - - - 0.0000000000000000000000000000000000000000000000002833 195.0
BYD3_k127_1651357_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD - - - 0.00000000000000000000003668 108.0
BYD3_k127_1651357_2 Response regulator, receiver K06147 - - 0.000000000000004533 79.0
BYD3_k127_1654560_0 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 294.0
BYD3_k127_1654560_1 ion binding. It is involved in the biological process described with proteolysis K07763,K07995,K07996,K07997,K08002,K08003 GO:0000003,GO:0000139,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0001525,GO:0001541,GO:0001558,GO:0001568,GO:0001655,GO:0001666,GO:0001704,GO:0001706,GO:0001763,GO:0001775,GO:0001822,GO:0001838,GO:0001935,GO:0001944,GO:0001952,GO:0001953,GO:0001958,GO:0002009,GO:0002165,GO:0002218,GO:0002252,GO:0002253,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002694,GO:0002696,GO:0003006,GO:0003007,GO:0003008,GO:0003143,GO:0003144,GO:0003313,GO:0003314,GO:0003315,GO:0003318,GO:0003319,GO:0003674,GO:0003824,GO:0004175,GO:0004177,GO:0004222,GO:0004252,GO:0005102,GO:0005178,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005794,GO:0005796,GO:0005802,GO:0005829,GO:0005856,GO:0005886,GO:0005887,GO:0006464,GO:0006508,GO:0006807,GO:0006810,GO:0006887,GO:0006928,GO:0006929,GO:0006935,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0006979,GO:0007154,GO:0007155,GO:0007162,GO:0007267,GO:0007275,GO:0007276,GO:0007292,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007413,GO:0007417,GO:0007419,GO:0007424,GO:0007426,GO:0007444,GO:0007492,GO:0007503,GO:0007505,GO:0007507,GO:0007548,GO:0007552,GO:0007560,GO:0007561,GO:0007600,GO:0007610,GO:0007631,GO:0008037,GO:0008038,GO:0008045,GO:0008047,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008236,GO:0008237,GO:0008238,GO:0008270,GO:0008283,GO:0008285,GO:0008347,GO:0008406,GO:0008584,GO:0008585,GO:0008593,GO:0009056,GO:0009266,GO:0009581,GO:0009582,GO:0009605,GO:0009611,GO:0009612,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009792,GO:0009886,GO:0009887,GO:0009888,GO:0009893,GO:0009897,GO:0009966,GO:0009968,GO:0009986,GO:0009987,GO:0010001,GO:0010033,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0010646,GO:0010648,GO:0010810,GO:0010812,GO:0010830,GO:0010831,GO:0010952,GO:0010954,GO:0012505,GO:0012506,GO:0014070,GO:0016020,GO:0016021,GO:0016043,GO:0016048,GO:0016192,GO:0016331,GO:0016477,GO:0016485,GO:0016504,GO:0016787,GO:0017171,GO:0019222,GO:0019233,GO:0019538,GO:0019827,GO:0019953,GO:0022008,GO:0022411,GO:0022414,GO:0022610,GO:0022617,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030111,GO:0030141,GO:0030154,GO:0030155,GO:0030162,GO:0030178,GO:0030182,GO:0030198,GO:0030234,GO:0030307,GO:0030323,GO:0030324,GO:0030334,GO:0030335,GO:0030425,GO:0030574,GO:0030659,GO:0030667,GO:0030728,GO:0031012,GO:0031090,GO:0031175,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031347,GO:0031349,GO:0031410,GO:0031638,GO:0031974,GO:0031982,GO:0031984,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032588,GO:0032879,GO:0032940,GO:0032963,GO:0032989,GO:0032990,GO:0034330,GO:0034769,GO:0035050,GO:0035148,GO:0035202,GO:0035239,GO:0035295,GO:0035579,GO:0035987,GO:0035988,GO:0036075,GO:0036211,GO:0036230,GO:0036293,GO:0036477,GO:0040008,GO:0040011,GO:0040012,GO:0040017,GO:0040036,GO:0040037,GO:0042060,GO:0042063,GO:0042119,GO:0042127,GO:0042221,GO:0042330,GO:0042470,GO:0042581,GO:0042756,GO:0042995,GO:0043005,GO:0043009,GO:0043062,GO:0043085,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0043615,GO:0043627,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044331,GO:0044352,GO:0044354,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044877,GO:0045055,GO:0045088,GO:0045089,GO:0045111,GO:0045137,GO:0045165,GO:0045168,GO:0045216,GO:0045296,GO:0045321,GO:0045577,GO:0045579,GO:0045595,GO:0045597,GO:0045619,GO:0045621,GO:0045746,GO:0045862,GO:0045927,GO:0046331,GO:0046528,GO:0046529,GO:0046545,GO:0046546,GO:0046660,GO:0046661,GO:0046872,GO:0046903,GO:0046914,GO:0048468,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048562,GO:0048563,GO:0048568,GO:0048569,GO:0048583,GO:0048584,GO:0048585,GO:0048598,GO:0048608,GO:0048609,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048701,GO:0048704,GO:0048705,GO:0048706,GO:0048707,GO:0048729,GO:0048731,GO:0048754,GO:0048770,GO:0048771,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050673,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050839,GO:0050864,GO:0050865,GO:0050867,GO:0050871,GO:0050877,GO:0050896,GO:0050906,GO:0050951,GO:0050961,GO:0050965,GO:0051094,GO:0051128,GO:0051129,GO:0051147,GO:0051149,GO:0051153,GO:0051155,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051249,GO:0051251,GO:0051270,GO:0051272,GO:0051336,GO:0051345,GO:0051604,GO:0051606,GO:0051674,GO:0051704,GO:0051893,GO:0051895,GO:0052547,GO:0060021,GO:0060022,GO:0060255,GO:0060322,GO:0060348,GO:0060349,GO:0060350,GO:0060429,GO:0060541,GO:0060562,GO:0060612,GO:0060828,GO:0060973,GO:0061134,GO:0061138,GO:0061448,GO:0061458,GO:0061564,GO:0062009,GO:0065007,GO:0065009,GO:0070006,GO:0070011,GO:0070013,GO:0070482,GO:0070613,GO:0071704,GO:0071711,GO:0071840,GO:0071944,GO:0072001,GO:0072091,GO:0072175,GO:0072358,GO:0072359,GO:0080090,GO:0080134,GO:0090090,GO:0090109,GO:0090287,GO:0090288,GO:0097094,GO:0097150,GO:0097156,GO:0097447,GO:0097458,GO:0097485,GO:0097708,GO:0098552,GO:0098588,GO:0098609,GO:0098727,GO:0098742,GO:0098772,GO:0098791,GO:0098805,GO:0099503,GO:0106030,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:1901201,GO:1901202,GO:1901564,GO:1901888,GO:1901889,GO:1902105,GO:1902107,GO:1903053,GO:1903054,GO:1903317,GO:1903319,GO:1903391,GO:1903392,GO:1903706,GO:1903708,GO:1904888,GO:1905521,GO:1905523,GO:1990834,GO:2000026,GO:2000145,GO:2000147,GO:2000647 3.4.24.80 0.0000004542 63.0
BYD3_k127_1666745_0 Molybdopterin oxidoreductase K07812,K08352 - 1.7.2.3,1.8.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 522.0
BYD3_k127_1666745_1 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 503.0
BYD3_k127_1666745_2 Cysteine dioxygenase type I K00456 - 1.13.11.20 0.000000000000000000000000004695 117.0
BYD3_k127_1666745_3 DedA family - - - 0.00000000000005811 79.0
BYD3_k127_1669650_0 C4-type zinc ribbon domain K07164 - - 0.00000000000000000003923 98.0
BYD3_k127_1674073_0 PFAM Peptidase M20 K12941 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008461 574.0
BYD3_k127_1674073_1 Protein of unknown function (DUF971) - - - 0.0000000000000006976 79.0
BYD3_k127_1682502_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000001093 151.0
BYD3_k127_1688474_0 phosphopantetheine binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 616.0
BYD3_k127_1688474_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001383 290.0
BYD3_k127_1688474_2 Methyltransferase domain - - - 0.00000000000000000000000002391 121.0
BYD3_k127_1688474_3 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000002743 72.0
BYD3_k127_1688474_4 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.00000000001257 74.0
BYD3_k127_1690804_0 Mur ligase middle domain K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 473.0
BYD3_k127_1690804_1 Protein of unknown function (DUF1232) - - - 0.000000000000001517 79.0
BYD3_k127_1698727_0 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 367.0
BYD3_k127_1698727_1 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005372 332.0
BYD3_k127_1698727_2 D-aminopeptidase K16203 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 318.0
BYD3_k127_1698727_3 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 308.0
BYD3_k127_1698727_4 cell division protein - - - 0.00005899 51.0
BYD3_k127_1701868_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.3.1.29,2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000034 440.0
BYD3_k127_1701868_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 368.0
BYD3_k127_1701914_0 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 481.0
BYD3_k127_1707641_0 PFAM aminotransferase, class I K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 404.0
BYD3_k127_1717795_0 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 422.0
BYD3_k127_1717850_0 acid phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 444.0
BYD3_k127_1723796_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 382.0
BYD3_k127_1723796_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 326.0
BYD3_k127_1723796_2 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000006342 231.0
BYD3_k127_1723796_3 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000002494 177.0
BYD3_k127_1723796_4 PFAM Cyclic nucleotide-binding K10914 - - 0.0000000000000000000000000000000006926 140.0
BYD3_k127_1723796_5 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000001049 133.0
BYD3_k127_1723796_6 Sigma-70 region 2 K03088 - - 0.0000000000000001012 90.0
BYD3_k127_1723796_7 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000184 76.0
BYD3_k127_17247_0 endonuclease III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 315.0
BYD3_k127_17247_1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain - - - 0.00000000000000000000000000000000000000000000000000000000000006014 222.0
BYD3_k127_17247_2 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000321 128.0
BYD3_k127_17247_3 - - - - 0.00009374 51.0
BYD3_k127_1732127_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000001592 243.0
BYD3_k127_1734668_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000003677 55.0
BYD3_k127_1745630_0 aldehyde oxidase and xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 6.184e-289 903.0
BYD3_k127_1745630_1 PFAM molybdopterin dehydrogenase, FAD-binding K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 366.0
BYD3_k127_1745630_2 2Fe-2S -binding K13483 - - 0.000000000000000000000000000000000000000000000000000000000000000003782 232.0
BYD3_k127_1745630_3 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000004355 122.0
BYD3_k127_1745630_4 PBS lyase HEAT domain protein repeat-containing protein - - - 0.00000008622 60.0
BYD3_k127_174684_0 Chromate transporter K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 292.0
BYD3_k127_174684_2 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins K03769,K07533 - 5.2.1.8 0.000000000000000000000000004053 122.0
BYD3_k127_174684_3 - - - - 0.00000000000000000000000006413 110.0
BYD3_k127_1766861_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 518.0
BYD3_k127_1766861_1 Peptidase, M20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 421.0
BYD3_k127_1766861_2 PaaX-like protein K02616 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001109 275.0
BYD3_k127_1766861_4 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family - - - 0.00000003256 57.0
BYD3_k127_1771355_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 1.854e-250 792.0
BYD3_k127_1771355_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000005693 171.0
BYD3_k127_1771355_2 outer membrane efflux protein K15725 - - 0.0000000114 63.0
BYD3_k127_177802_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 430.0
BYD3_k127_177802_1 Cytochrome c - - - 0.00000000000000000000000000000000000000000000004275 180.0
BYD3_k127_177802_2 Cytochrome c - - - 0.0000000000000000000000000000000000000000001184 161.0
BYD3_k127_1779630_0 site-specific DNA-methyltransferase (adenine-specific) activity K03427 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 527.0
BYD3_k127_1779630_1 L-asparaginase K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 361.0
BYD3_k127_1779630_2 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001028 289.0
BYD3_k127_1779630_3 DNA methylase K00571,K07319 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000002114 267.0
BYD3_k127_1783263_0 Tricorn protease homolog K08676 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 536.0
BYD3_k127_1783263_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005037 394.0
BYD3_k127_1786753_0 Amidohydrolase family - - - 0.0 1084.0
BYD3_k127_1786753_1 Proposed nucleic acid binding domain - - - 1.962e-305 968.0
BYD3_k127_1786753_2 ABC transporter K06020 - 3.6.3.25 4.281e-300 926.0
BYD3_k127_1786753_3 PQQ-like domain - - - 6.452e-206 650.0
BYD3_k127_1786753_4 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 441.0
BYD3_k127_1786753_5 PFAM Rieske 2Fe-2S domain protein K00479,K00499 - 1.14.15.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 406.0
BYD3_k127_1786753_6 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005856 360.0
BYD3_k127_1786753_7 PFAM glycosyl transferase family 9 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006181 260.0
BYD3_k127_1786753_8 ACR, YhhQ family COG1738 K09125 - - 0.0000000000000000000000000000000000000000000000000000000007302 206.0
BYD3_k127_1786753_9 pfkB family carbohydrate kinase K16370 - 2.7.1.11 0.000000002544 68.0
BYD3_k127_1790908_0 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 408.0
BYD3_k127_1790908_1 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006034 262.0
BYD3_k127_1790908_2 TPR repeat - - - 0.00000000002954 75.0
BYD3_k127_1792564_0 PFAM plasmid stabilization system K06218 - - 0.0000000000000003117 81.0
BYD3_k127_1792564_1 - - - - 0.0000000000009499 70.0
BYD3_k127_1792564_2 Belongs to the 'phage' integrase family - - - 0.0004512 44.0
BYD3_k127_1796643_0 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000001375 143.0
BYD3_k127_1796643_1 PFAM Abortive infection protein K07052 - - 0.000001347 53.0
BYD3_k127_1796643_2 Domain of unknown function (DUF4870) - - - 0.000008518 51.0
BYD3_k127_1801061_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 601.0
BYD3_k127_1801061_2 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000002186 59.0
BYD3_k127_1806004_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 3.376e-194 616.0
BYD3_k127_1806004_1 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 396.0
BYD3_k127_1806004_2 Evidence 4 Homologs of previously reported genes of K09700 - - 0.000000000000000000000000000000003255 134.0
BYD3_k127_1807928_0 O-Antigen ligase K02847 - - 0.0000000000000000000000000000000000000001283 168.0
BYD3_k127_1807928_1 Polysaccharide export protein K01991 - - 0.00000000000000000000000000000007645 138.0
BYD3_k127_1813328_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 509.0
BYD3_k127_1813328_1 Vault protein inter-alpha-trypsin domain K07114 - - 0.0000000000000000000000000000000000000000004143 162.0
BYD3_k127_1813328_2 Transposase IS200 like - - - 0.000000000000000000000000006027 116.0
BYD3_k127_1813438_0 Domain of unknown function (DUF4350) - - - 0.000000000000000000000003876 116.0
BYD3_k127_1821214_0 Glycosyl transferase 4-like - - - 0.00000000000000000000002159 109.0
BYD3_k127_1832441_0 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000002701 269.0
BYD3_k127_1832441_1 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000000000000000000000000000000000000000000000006608 237.0
BYD3_k127_1832441_2 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000002344 172.0
BYD3_k127_1832441_3 transferase activity, transferring amino-acyl groups - - - 0.000000000000000000000000000000000003391 148.0
BYD3_k127_1832441_4 Acetyltransferase (GNAT) domain - - - 0.0002569 51.0
BYD3_k127_1862625_0 NADH dehydrogenase (ubiquinone) activity K14089 - - 5.215e-253 790.0
BYD3_k127_1862625_1 Proton-conducting membrane transporter K12141 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0033554,GO:0044425,GO:0044464,GO:0050896,GO:0051716,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 452.0
BYD3_k127_1862625_2 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000309 151.0
BYD3_k127_1862625_3 MacB-like periplasmic core domain - - - 0.0000000000000000000001536 102.0
BYD3_k127_1863293_0 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000001522 258.0
BYD3_k127_1863293_1 Nucleotidyl transferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000006647 211.0
BYD3_k127_1863293_2 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.000000000000000000000000000000000000000001865 160.0
BYD3_k127_1863293_3 conserved protein, contains double-stranded beta-helix domain - - - 0.00000000000000000000000000000003967 129.0
BYD3_k127_1863293_4 Histidine kinase K02480,K07683 - 2.7.13.3 0.0000000000000000000001336 106.0
BYD3_k127_1863293_5 regulator - - - 0.0000000000000001841 86.0
BYD3_k127_1863293_6 Ribosomal-protein-alanine acetyltransferase K03789 GO:0003674,GO:0003824,GO:0004596,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031365,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.128 0.000003566 55.0
BYD3_k127_1869349_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000001911 245.0
BYD3_k127_1871680_0 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 524.0
BYD3_k127_1871680_1 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 451.0
BYD3_k127_1871680_2 ABC-2 family transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 307.0
BYD3_k127_1871680_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 311.0
BYD3_k127_1871680_4 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.00000000000000000000000000000000000000000000000000000003993 204.0
BYD3_k127_1871680_5 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000624 84.0
BYD3_k127_1882513_0 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000929 237.0
BYD3_k127_1882513_1 Belongs to the precorrin methyltransferase family K13542 - 2.1.1.107,4.2.1.75 0.000000000000000000000000001031 118.0
BYD3_k127_1882513_2 TIGRFAM VWFA-related Acidobacterial domain - - - 0.000000000000000000000004839 115.0
BYD3_k127_1882513_3 - - - - 0.0000001319 61.0
BYD3_k127_1887753_0 Carbamoyltransferase C-terminus K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 587.0
BYD3_k127_1887753_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000006362 240.0
BYD3_k127_1887753_10 Methyltransferase - - - 0.0000000001132 72.0
BYD3_k127_1887753_11 Glycosyl transferase family 2 - - - 0.00000008492 63.0
BYD3_k127_1887753_2 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000003738 175.0
BYD3_k127_1887753_3 N-acetyl-alpha-D-glucosaminyl L-malate synthase - - - 0.000000000000000000000000000000000000000001706 172.0
BYD3_k127_1887753_4 methyltransferase K16129 - - 0.000000000000000000000000000000001374 139.0
BYD3_k127_1887753_5 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000001036 135.0
BYD3_k127_1887753_6 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000001546 128.0
BYD3_k127_1887753_7 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000002658 127.0
BYD3_k127_1887753_8 PFAM glycosyl transferase family 2 - - - 0.000000000000000000000000003458 124.0
BYD3_k127_1887753_9 Protein of unknown function (DUF1698) - - - 0.000000000001288 78.0
BYD3_k127_190433_0 peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 405.0
BYD3_k127_190433_1 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.00008264 50.0
BYD3_k127_1911716_0 PFAM LmbE family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 316.0
BYD3_k127_1911716_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000002535 160.0
BYD3_k127_1912045_0 Permease, YjgP YjgQ - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009107 398.0
BYD3_k127_1912045_1 Subtilase family K17734 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005616 396.0
BYD3_k127_1912045_2 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.000000000000000000000000000000000000000000000000000000001163 207.0
BYD3_k127_1915134_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 576.0
BYD3_k127_1915134_1 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000006674 251.0
BYD3_k127_1915134_2 - - - - 0.000683 47.0
BYD3_k127_1915578_0 protein-disulfide reductase activity K04084,K06196 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 464.0
BYD3_k127_1915578_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 405.0
BYD3_k127_1915578_2 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.00000000000000000000000000000000000000000000000000000000001883 208.0
BYD3_k127_1915578_3 squalene-associated FAD-dependent desaturase K21677 - 1.17.8.1 0.0000000000000000000000000000000000000000000000000000000001119 215.0
BYD3_k127_1915578_4 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000002325 140.0
BYD3_k127_1915578_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.000000000000000000000000168 124.0
BYD3_k127_1915578_6 NosL - - - 0.000000000000002899 82.0
BYD3_k127_1916290_0 PFAM Glycine sarcosine betaine reductase component B subunits - - - 0.000000000000000000000000000000000000000842 156.0
BYD3_k127_1916290_1 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) K10672 - 1.21.4.2 0.000000000000000000575 89.0
BYD3_k127_1916290_2 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) K10672,K21579 - 1.21.4.2,1.21.4.4 0.000000000009057 67.0
BYD3_k127_1921474_0 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001722 285.0
BYD3_k127_1921474_1 Enoyl-CoA hydratase K07537 - 4.2.1.100 0.000000000000000000000000000000000000000000000000000000000000001982 226.0
BYD3_k127_1921474_2 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000001228 223.0
BYD3_k127_1927078_0 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002605 293.0
BYD3_k127_1927078_2 COG3678 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein K06006 - - 0.00000003359 62.0
BYD3_k127_193187_0 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01667 - 4.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005554 408.0
BYD3_k127_193187_1 spermidine synthase activity K00797 GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004583 437.0
BYD3_k127_193187_2 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000000009588 201.0
BYD3_k127_193187_3 OsmC-like protein - - - 0.000000000000000000000000000000000222 137.0
BYD3_k127_193187_4 amine dehydrogenase activity - - - 0.000000000000000000000000001617 121.0
BYD3_k127_193187_5 - - - - 0.000006559 58.0
BYD3_k127_193187_6 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00002539 58.0
BYD3_k127_1938915_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 355.0
BYD3_k127_1938915_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001152 251.0
BYD3_k127_1943865_0 Nickel-dependent hydrogenase K06281 - 1.12.99.6 0.0 1132.0
BYD3_k127_1943865_1 Initiates the rapid degradation of small, acid-soluble proteins during spore germination - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 348.0
BYD3_k127_1943865_2 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 334.0
BYD3_k127_1943865_3 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 283.0
BYD3_k127_1943865_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001619 259.0
BYD3_k127_1943865_5 iron-sulfur cluster assembly - - - 0.0000000000000000000000000000000000000001086 157.0
BYD3_k127_1943865_6 Hydrogenase maturation protease K03605 - - 0.000000000001619 75.0
BYD3_k127_1946988_0 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006794 418.0
BYD3_k127_1946988_1 Required for morphogenesis under gluconeogenic growth conditions - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 338.0
BYD3_k127_1946988_2 Tetratricopeptide repeat - - - 0.00000000005876 71.0
BYD3_k127_1952326_0 ATPase AAA-2 domain protein K03696 - - 1.112e-263 818.0
BYD3_k127_1958012_0 Cupin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 300.0
BYD3_k127_1958012_1 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000005959 140.0
BYD3_k127_1958012_2 - - - - 0.00000000000000000000000001452 115.0
BYD3_k127_1958012_3 Roadblock/LC7 domain - - - 0.00000000001775 69.0
BYD3_k127_1958012_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000271 53.0
BYD3_k127_1958422_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 498.0
BYD3_k127_1958422_1 Amidohydrolase family - - - 0.00000000000000000000000000002423 124.0
BYD3_k127_1962612_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000007499 159.0
BYD3_k127_1967377_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 516.0
BYD3_k127_1967377_1 Unusual protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009013 344.0
BYD3_k127_1972995_0 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007022 430.0
BYD3_k127_1972995_1 Prolyl oligopeptidase K01322 - 3.4.21.26 0.00000000000000005406 82.0
BYD3_k127_1972995_2 Tricorn protease homolog K08676 - - 0.0000000000007093 69.0
BYD3_k127_1989580_0 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 358.0
BYD3_k127_1989580_1 metal-binding protein (DUF2227) - - - 0.000000000000000000000000000000000001547 144.0
BYD3_k127_1989580_2 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000009148 111.0
BYD3_k127_1989580_3 23S rRNA-intervening sequence protein - - - 0.00000000000000000000002995 101.0
BYD3_k127_1990503_0 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000000000503 222.0
BYD3_k127_1990503_1 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000001465 64.0
BYD3_k127_1990576_0 Receptor family ligand binding region K01999 - - 0.0000000000000000002375 100.0
BYD3_k127_1995001_0 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 301.0
BYD3_k127_1995001_1 Removes 5-oxoproline from various penultimate amino acid residues except L-proline K01304 GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:1901564 3.4.19.3 0.000000000000000000000000000000000000000000000000000000000000002065 223.0
BYD3_k127_1995001_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000003806 220.0
BYD3_k127_1995001_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000002635 203.0
BYD3_k127_1995001_4 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000001609 176.0
BYD3_k127_2004512_0 Sugar (and other) transporter - - - 1.234e-214 677.0
BYD3_k127_2004512_1 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006195 461.0
BYD3_k127_2007746_0 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005616 397.0
BYD3_k127_2007746_1 PFAM Linocin_M18 bacteriocin protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 321.0
BYD3_k127_2007746_2 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000001157 86.0
BYD3_k127_2007746_3 Psort location Cytoplasmic, score K02340 - 2.7.7.7 0.0000000000001176 78.0
BYD3_k127_2012612_0 Belongs to the serpin family K13963 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 456.0
BYD3_k127_2012612_1 response regulator - - - 0.000000000000000000000000000000000000000000002794 169.0
BYD3_k127_2012612_2 Histidine kinase - - - 0.00000000000000000000003762 102.0
BYD3_k127_2012612_3 Conserved repeat domain - - - 0.0000000000000000001815 98.0
BYD3_k127_2012612_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000524 96.0
BYD3_k127_2012612_5 Putative phosphatase (DUF442) - - - 0.0000000000000009291 84.0
BYD3_k127_2012612_6 Two component regulator three Y - - - 0.00000000000001447 85.0
BYD3_k127_2012612_7 Bacterial protein of unknown function (DUF885) - - - 0.0000000000006818 69.0
BYD3_k127_2012612_8 Domain of unknown function (DUF5122) beta-propeller - - - 0.000003435 58.0
BYD3_k127_2013732_0 TIGRFAM amidase, hydantoinase carbamoylase family K06016 - 3.5.1.6,3.5.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005643 501.0
BYD3_k127_2013732_1 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 344.0
BYD3_k127_2013732_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001562 249.0
BYD3_k127_2013732_3 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001909 254.0
BYD3_k127_2013732_4 - - - - 0.000000000000000000000000000000000000000000000000000000005324 206.0
BYD3_k127_2013732_5 Putative lumazine-binding - - - 0.00000000000000000000000000000000000000000000000000000004642 198.0
BYD3_k127_2013732_6 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000001708 158.0
BYD3_k127_2013732_7 - K09004 - - 0.000000000000000000000000000000008187 135.0
BYD3_k127_2013732_8 ECF sigma factor - - - 0.0001765 46.0
BYD3_k127_2019870_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 546.0
BYD3_k127_2019870_1 HD domain - - - 0.00000000000000000000000000000000000000000000000000001697 205.0
BYD3_k127_2019870_2 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000003499 189.0
BYD3_k127_2019870_3 transcriptional - - - 0.000000000000000000003433 98.0
BYD3_k127_2019870_4 Belongs to the anti-sigma-factor antagonist family K06378 - - 0.00004089 51.0
BYD3_k127_2019870_5 DsrE/DsrF-like family K07235 - - 0.0001411 45.0
BYD3_k127_2021631_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 409.0
BYD3_k127_2022097_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008161 327.0
BYD3_k127_2022097_1 beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000002596 215.0
BYD3_k127_2023478_0 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000007695 243.0
BYD3_k127_2023478_1 - - - - 0.0002948 54.0
BYD3_k127_2024115_0 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 3.828e-277 862.0
BYD3_k127_2024115_1 cell adhesion - - - 0.000000000000002571 87.0
BYD3_k127_2025727_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003957 524.0
BYD3_k127_2028806_0 - - - - 0.00000000000001949 78.0
BYD3_k127_2028806_1 CheB methylesterase - - - 0.0000000000003999 70.0
BYD3_k127_2030881_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 9.554e-219 692.0
BYD3_k127_2030881_1 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 516.0
BYD3_k127_2034284_0 Protein of unknown function (DUF3616) - - - 0.000000000000000000001138 107.0
BYD3_k127_2038178_0 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 297.0
BYD3_k127_2038178_1 Glycosyltransferase like family K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000003889 246.0
BYD3_k127_2038178_2 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.000000000000001118 85.0
BYD3_k127_2044141_0 - - - - 0.00000000000000000000000000000000000000000007351 183.0
BYD3_k127_2054734_0 Methylase involved in ubiquinone menaquinone K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 295.0
BYD3_k127_2054734_1 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001362 250.0
BYD3_k127_2054734_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000003512 152.0
BYD3_k127_2054734_3 - - - - 0.00000000000001168 82.0
BYD3_k127_2065357_0 Belongs to the UbiD family K03182 - 4.1.1.98 2.716e-216 681.0
BYD3_k127_2065357_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 580.0
BYD3_k127_2065357_10 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005822 247.0
BYD3_k127_2065357_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000003333 247.0
BYD3_k127_2065357_12 Stage II sporulation protein M - - - 0.000000000000000000000000000000000000000000000000000000000000001333 229.0
BYD3_k127_2065357_13 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000005359 221.0
BYD3_k127_2065357_14 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000009586 216.0
BYD3_k127_2065357_15 DJ-1/PfpI family K05520 - 3.5.1.124 0.000000000000000000000000000000000000000000000000001607 188.0
BYD3_k127_2065357_16 Protein of unknown function (DUF3455) - - - 0.00000000000000000000004347 110.0
BYD3_k127_2065357_17 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000007741 101.0
BYD3_k127_2065357_2 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000788 473.0
BYD3_k127_2065357_3 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004361 423.0
BYD3_k127_2065357_4 Transcriptional regulator K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 405.0
BYD3_k127_2065357_5 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006672 390.0
BYD3_k127_2065357_6 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 332.0
BYD3_k127_2065357_7 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 329.0
BYD3_k127_2065357_8 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 323.0
BYD3_k127_2065357_9 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 312.0
BYD3_k127_2069071_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 2.797e-220 694.0
BYD3_k127_2069071_1 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000004275 229.0
BYD3_k127_2077384_0 Transposase K02557,K07484,K13924,K21471 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007945 633.0
BYD3_k127_2084733_0 catalase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002568 280.0
BYD3_k127_2084733_1 cAMP biosynthetic process - - - 0.0000000000000000000000000000000004365 140.0
BYD3_k127_2084733_2 Sigma-70 region 2 K03088 - - 0.000004031 55.0
BYD3_k127_2095523_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 1.58e-268 848.0
BYD3_k127_2095523_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 336.0
BYD3_k127_2095523_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000004661 146.0
BYD3_k127_2095523_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000003215 100.0
BYD3_k127_2101817_0 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000003889 211.0
BYD3_k127_2101817_1 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000000000000002657 198.0
BYD3_k127_2101817_2 galactose-6-phosphate isomerase activity K00761,K01808 - 2.4.2.9,5.3.1.6 0.000000000000000000000000000000000000000000008476 169.0
BYD3_k127_2101817_3 Protein of unknown function (DUF962) - - - 0.000000000000000000000000000000000000000001107 160.0
BYD3_k127_2106858_0 R3H domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000486 618.0
BYD3_k127_2106858_1 Pfam:N_methyl_2 - - - 0.00000000000000000002669 97.0
BYD3_k127_2106858_2 type II secretion system protein K - - - 0.00000000000000006659 95.0
BYD3_k127_2106858_3 Pfam:N_methyl_2 - - - 0.0000000000000002814 84.0
BYD3_k127_2106858_4 Cell motility and secretion Intracellular trafficking and secretion - - - 0.00000001887 58.0
BYD3_k127_2106858_5 Type IV Pilus-assembly protein W K02672 - - 0.000008254 58.0
BYD3_k127_2106858_6 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.00009255 51.0
BYD3_k127_2106858_7 Prokaryotic N-terminal methylation motif K02671 - - 0.0009022 49.0
BYD3_k127_2108712_0 major pilin protein fima - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008802 434.0
BYD3_k127_2108712_1 Transcription factor zinc-finger K09981 - - 0.00000000001355 68.0
BYD3_k127_2115193_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 308.0
BYD3_k127_2115193_1 Putative glucoamylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 294.0
BYD3_k127_2119897_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000009687 235.0
BYD3_k127_2119897_1 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K01259 - 3.4.11.5 0.00000000000000000000000000000000000003673 156.0
BYD3_k127_2119897_2 CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000009582 115.0
BYD3_k127_2119897_3 snoRNA binding - - - 0.000000000417 65.0
BYD3_k127_2124768_0 Peptidase S46 - - - 5.43e-223 711.0
BYD3_k127_2124768_1 N-terminal domain of (some) glycogen debranching enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 574.0
BYD3_k127_2124768_2 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 564.0
BYD3_k127_2124768_3 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 382.0
BYD3_k127_2124768_4 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002909 284.0
BYD3_k127_2124768_5 Prolyl oligopeptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006778 274.0
BYD3_k127_2124768_6 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000001978 223.0
BYD3_k127_2124768_7 Membrane - - - 0.000000000000000000000000000000000000405 145.0
BYD3_k127_2124768_8 Dodecin K09165 - - 0.00000000001978 67.0
BYD3_k127_2124768_9 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.0004719 48.0
BYD3_k127_2125811_0 PFAM amine oxidase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000966 376.0
BYD3_k127_2125811_1 Phytoene dehydrogenase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 367.0
BYD3_k127_2125811_2 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000006577 220.0
BYD3_k127_2125811_3 PFAM glycosyl transferase family 2 K14597 - - 0.00000000000000000000000000000000000000000000000000000000001143 223.0
BYD3_k127_2125811_4 Belongs to the FPP GGPP synthase family K00795,K02523,K13789 GO:0003674,GO:0003824,GO:0004161,GO:0004311,GO:0004337,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009536,GO:0009842,GO:0009987,GO:0016114,GO:0016740,GO:0016765,GO:0019637,GO:0033383,GO:0033384,GO:0033385,GO:0033386,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045337,GO:0045338,GO:0071704,GO:0090407,GO:1901576 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.0000000000000000000000000000000000000000000002235 179.0
BYD3_k127_2125811_5 Phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000001285 117.0
BYD3_k127_2125811_6 Carotenoid biosynthesis protein - - - 0.000000000000000000003671 104.0
BYD3_k127_2125811_7 alpha/beta hydrolase fold - - - 0.00000000005888 72.0
BYD3_k127_2132569_0 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000001521 161.0
BYD3_k127_2148186_0 Aldehyde oxidase and xanthine dehydrogenase a b hammerhead K03520,K11177 - 1.17.1.4,1.2.5.3 0.0 1318.0
BYD3_k127_2148186_1 Associated with various cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 383.0
BYD3_k127_2148186_2 XdhC Rossmann domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003232 255.0
BYD3_k127_2148186_3 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000008657 172.0
BYD3_k127_2148186_4 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.000000000000000000000000000000000000002229 153.0
BYD3_k127_2148186_5 VWA domain containing CoxE-like protein K07161 - - 0.0000000381 61.0
BYD3_k127_2151686_0 PFAM acyl-CoA dehydrogenase domain protein K00255,K11731 - 1.3.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 421.0
BYD3_k127_2151686_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 416.0
BYD3_k127_2151686_2 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 348.0
BYD3_k127_2151686_3 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 312.0
BYD3_k127_2151686_4 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000001074 236.0
BYD3_k127_2151686_5 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - - 0.0000000000000000000000000000000000000000000000000009201 200.0
BYD3_k127_2151686_6 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000009527 177.0
BYD3_k127_2151686_7 Belongs to the thiolase family - - - 0.00000000000000000000000000000000000149 140.0
BYD3_k127_2151686_8 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 GO:0005575,GO:0005576 1.3.3.11 0.000003667 57.0
BYD3_k127_2180015_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 2.413e-211 669.0
BYD3_k127_2180015_1 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 346.0
BYD3_k127_2180015_2 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000001974 270.0
BYD3_k127_2180015_3 - - - - 0.000005756 52.0
BYD3_k127_2185526_0 Tricorn protease PDZ domain K08676 - - 1.465e-228 722.0
BYD3_k127_2192691_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 488.0
BYD3_k127_2192691_1 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009074 317.0
BYD3_k127_2192691_2 Rhomboid family K19225 - 3.4.21.105 0.00000000000000000000000000000000000000003089 168.0
BYD3_k127_2192691_3 PspA/IM30 family K03969 - - 0.000000000000000000000000000000000000003729 155.0
BYD3_k127_2192691_4 PFAM glycosyl transferase family 9 - - - 0.0000001002 63.0
BYD3_k127_2203598_0 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 318.0
BYD3_k127_2203598_1 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 304.0
BYD3_k127_2203598_2 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000000000000173 206.0
BYD3_k127_2203598_3 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000002165 178.0
BYD3_k127_2204224_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 304.0
BYD3_k127_2204224_1 Glycosyl transferases group 1 K21001 - - 0.00000000000000000002734 94.0
BYD3_k127_2211317_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 356.0
BYD3_k127_221185_0 Deacetylases, including yeast histone deacetylase and acetoin utilization protein K11418 - 3.5.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008 331.0
BYD3_k127_221185_1 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000000000000509 237.0
BYD3_k127_221185_2 PFAM Homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000002852 178.0
BYD3_k127_221185_3 Thioesterase superfamily K10806 - - 0.000000000000000000000000000002501 124.0
BYD3_k127_221185_4 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000001044 113.0
BYD3_k127_221185_5 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000008961 113.0
BYD3_k127_2213030_0 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 7.107e-268 844.0
BYD3_k127_2213030_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007654 277.0
BYD3_k127_2213030_2 metallopeptidase activity K06212,K06402 GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016021,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0031224,GO:0031226,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 - 0.0000000000000000000000000000000000000000000000000000000000000000000006409 242.0
BYD3_k127_2213030_3 Mrr N-terminal domain K07448 - - 0.000007246 56.0
BYD3_k127_2214275_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.938e-276 862.0
BYD3_k127_2214275_1 Methyltransferase - - - 0.00000000000000000000000000000000000000000000001435 175.0
BYD3_k127_2215524_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1037.0
BYD3_k127_2215524_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 3.75e-322 1024.0
BYD3_k127_2215524_2 Sir2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 327.0
BYD3_k127_2215524_3 COG2366 Protein related to penicillin acylase K07116 - 3.5.1.97 0.0000000000000000000000000000000000000000000000000000002079 206.0
BYD3_k127_2215524_4 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.0000000000000000000000000000000000000000000000000001192 189.0
BYD3_k127_2216648_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07644 - 2.7.13.3 0.000000003201 64.0
BYD3_k127_2216648_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000001183 61.0
BYD3_k127_2219404_0 Amidohydrolase family K01464 - 3.5.2.2 8.116e-213 669.0
BYD3_k127_2219404_1 permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 2.145e-195 620.0
BYD3_k127_2219404_2 COGs COG0160 4-aminobutyrate aminotransferase and related aminotransferase K00823,K07250 - 2.6.1.19,2.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 533.0
BYD3_k127_2219404_3 hydrolase of the alpha beta superfamily K07017 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000142 283.0
BYD3_k127_2219404_4 DinB superfamily - - - 0.000000000000000000000000000000000000000003273 161.0
BYD3_k127_2219404_5 NUDIX domain - - - 0.00000000000000000000000135 110.0
BYD3_k127_2219404_6 HEAT repeat - - - 0.0000000005824 68.0
BYD3_k127_2219404_7 Belongs to the peptidase M10A family K07761,K07999 GO:0001101,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009753,GO:0010033,GO:0010035,GO:0010038,GO:0016020,GO:0016787,GO:0019538,GO:0031224,GO:0031225,GO:0032502,GO:0040007,GO:0042221,GO:0043170,GO:0044238,GO:0044425,GO:0044464,GO:0046686,GO:0048519,GO:0048580,GO:0048583,GO:0048589,GO:0048831,GO:0050789,GO:0050793,GO:0050896,GO:0051093,GO:0051239,GO:0051241,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080186,GO:0140096,GO:1900055,GO:1900056,GO:1901564,GO:1901700,GO:1905622,GO:2000024,GO:2000026,GO:2000028,GO:2000241 - 0.0008214 52.0
BYD3_k127_2238774_0 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005275 351.0
BYD3_k127_2238774_1 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000002686 99.0
BYD3_k127_2239692_0 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 303.0
BYD3_k127_2239692_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007785 291.0
BYD3_k127_2239692_2 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000002209 185.0
BYD3_k127_2239692_3 outer membrane lipoprotein carrier protein LolA K03634 - - 0.00000000000000000000000000000000000000001404 162.0
BYD3_k127_2239692_4 5'-nucleotidase - - - 0.00000000000000000000000000000000000000009251 166.0
BYD3_k127_2239692_5 KR domain - - - 0.00000000000000000000004163 103.0
BYD3_k127_2239692_6 Protein of unknown function (DUF721) - - - 0.000008922 53.0
BYD3_k127_2242946_0 Trehalose utilisation K09992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000137 274.0
BYD3_k127_2242946_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000004931 254.0
BYD3_k127_2242946_3 Homoserine dehydrogenase, NAD binding domain - - - 0.00006289 46.0
BYD3_k127_2244993_0 Phage protein D K06905 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 312.0
BYD3_k127_2244993_1 Rhs element vgr protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005469 272.0
BYD3_k127_2244993_2 PFAM LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004426 249.0
BYD3_k127_2244993_3 homolog of phage Mu protein gp47 - - - 0.00000000000000000000000000000000000000000000000000000000000001967 247.0
BYD3_k127_2244993_4 Gene 25-like lysozyme K06903 - - 0.00000000000000000000000000000000000000000000000000004573 189.0
BYD3_k127_2244993_5 PAAR motif - - - 0.0000000000000000000000000000000000000000004994 159.0
BYD3_k127_2247700_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000001906 117.0
BYD3_k127_2253918_0 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 354.0
BYD3_k127_2253918_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000007334 172.0
BYD3_k127_2253918_2 FAD binding domain - - - 0.00000000000000000000000000000000003066 145.0
BYD3_k127_2254018_0 Mate efflux family protein K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 516.0
BYD3_k127_2254018_1 glutamate--cysteine ligase - - - 0.00000000000000000000000000000000000000000000000000000003546 202.0
BYD3_k127_2254018_2 - K03686 - - 0.000000003988 61.0
BYD3_k127_2254018_3 Glycosyl hydrolase family 26 - - - 0.0000249 54.0
BYD3_k127_2261279_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000001929 228.0
BYD3_k127_2261279_1 hemolysin - - - 0.00000000000000000000000000000000000000000000000000000000000006038 226.0
BYD3_k127_2261279_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000001383 200.0
BYD3_k127_2261279_3 Yhs domain-containing protein - - - 0.000000000000000000000000000000000000000000002929 171.0
BYD3_k127_2261652_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 GO:0000287,GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0008976,GO:0009267,GO:0009405,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0015968,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019538,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0036293,GO:0040007,GO:0042594,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044464,GO:0046777,GO:0046872,GO:0050896,GO:0051704,GO:0051716,GO:0070482,GO:0071496,GO:0071704,GO:0071944,GO:1901564 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 576.0
BYD3_k127_2261652_1 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000000000002515 227.0
BYD3_k127_2261652_2 Probable molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000001134 181.0
BYD3_k127_2261652_3 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531 3.1.4.58 0.0000000000000000000000000000000000000000000008953 172.0
BYD3_k127_226310_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 487.0
BYD3_k127_2264189_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000002873 265.0
BYD3_k127_2264189_1 Biotin-requiring enzyme - - - 0.0000000000000000000004035 102.0
BYD3_k127_2264276_0 IgA Peptidase M64 - - - 1.078e-209 663.0
BYD3_k127_2264276_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000001463 132.0
BYD3_k127_2264276_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000029 121.0
BYD3_k127_2264325_0 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000000000000000166 147.0
BYD3_k127_2264325_1 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000008827 111.0
BYD3_k127_2264325_2 Belongs to the GSP D family K02666 - - 0.00000018 63.0
BYD3_k127_2264325_3 Pilus assembly protein K02662 - - 0.0000003751 61.0
BYD3_k127_2265703_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 412.0
BYD3_k127_2265703_1 nuclear chromosome segregation - - - 0.0000000000000000000000008028 119.0
BYD3_k127_2265703_2 Transglycosylase SLT domain K08309 - - 0.0000000001755 71.0
BYD3_k127_228094_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008552 561.0
BYD3_k127_228094_1 DNA-templated transcription, initiation K03088 - - 0.000000006388 61.0
BYD3_k127_228094_2 Glycosyl hydrolases family 43 - - - 0.00000003408 57.0
BYD3_k127_2285115_0 gluconolactonase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008101 485.0
BYD3_k127_2285115_1 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002823 281.0
BYD3_k127_2285115_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000623 259.0
BYD3_k127_2285115_3 helix_turn_helix, Lux Regulon K02282,K07689 - - 0.000000000000000000000000000000000000000000000000000000000000000000251 235.0
BYD3_k127_2285115_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000001339 220.0
BYD3_k127_2285115_5 belongs to the thioredoxin family K03671,K03672 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000004754 213.0
BYD3_k127_2285115_6 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000004663 221.0
BYD3_k127_2287877_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.00000000000000000000000000000000000000000000000000000000004817 216.0
BYD3_k127_2287877_1 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000009341 99.0
BYD3_k127_2287877_2 ribosomal large subunit export from nucleus - - - 0.0000000000000001071 86.0
BYD3_k127_2295331_0 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 314.0
BYD3_k127_2295331_1 acetyltransferase - - - 0.000000000000000000000000000000000001244 142.0
BYD3_k127_2296953_0 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002982 542.0
BYD3_k127_2296953_1 Belongs to the ALAD family K01698 GO:0000287,GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 440.0
BYD3_k127_2296953_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006856 394.0
BYD3_k127_2296953_3 Amidohydrolase family K12960,K20810 - 3.5.4.28,3.5.4.31,3.5.4.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 360.0
BYD3_k127_2301618_0 Two component transcriptional regulator, winged helix family K07658,K07668 - - 0.0000000000000000000000000000000000000000000000000000000000000003376 230.0
BYD3_k127_2301618_1 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000226 234.0
BYD3_k127_2301618_2 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000002231 124.0
BYD3_k127_2307720_0 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 346.0
BYD3_k127_2315337_0 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 401.0
BYD3_k127_2315337_1 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000004976 175.0
BYD3_k127_2324397_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 372.0
BYD3_k127_2324397_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 334.0
BYD3_k127_2324397_2 Probable transposase K07496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 329.0
BYD3_k127_2324397_3 COG1078 HD superfamily phosphohydrolases K06885 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 320.0
BYD3_k127_2324397_4 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000144 275.0
BYD3_k127_2324397_5 Thiol-disulfide oxidoreductase - - - 0.0000000000000000000000000000000000000000000006728 170.0
BYD3_k127_2324397_6 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000004854 158.0
BYD3_k127_2324397_7 Belongs to the Fur family K09825 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000004226 118.0
BYD3_k127_2324397_9 Serine threonine protein kinase - - - 0.0000003222 63.0
BYD3_k127_2329044_0 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000001054 134.0
BYD3_k127_2333507_0 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000002817 191.0
BYD3_k127_2333507_1 Conserved hypothetical protein 95 - - - 0.0000000000000000000000000000000000000004457 155.0
BYD3_k127_2341788_0 Psort location CytoplasmicMembrane, score - - - 0.000000000000001567 84.0
BYD3_k127_2349001_0 - - - - 0.000000000000000000003563 100.0
BYD3_k127_2349001_1 - K05594 - - 0.00000000000001097 79.0
BYD3_k127_2349001_2 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000002506 64.0
BYD3_k127_2350803_0 amine dehydrogenase activity - - - 0.00000004121 65.0
BYD3_k127_2370776_0 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 300.0
BYD3_k127_2376925_0 Carboxypeptidase regulatory-like domain - - - 2.165e-308 980.0
BYD3_k127_2376925_1 peptidyl-tyrosine sulfation - - - 2.814e-227 719.0
BYD3_k127_2376925_2 Trehalase K01194 - 3.2.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 517.0
BYD3_k127_2376925_3 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 516.0
BYD3_k127_2376925_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000001954 211.0
BYD3_k127_2376925_5 PFAM glycoside hydrolase, family 37 K01194 - 3.2.1.28 0.000000000000000000000000000000009162 133.0
BYD3_k127_2376925_6 PFAM Tetratricopeptide repeat - - - 0.0000002637 54.0
BYD3_k127_2377312_0 CHASE3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 547.0
BYD3_k127_2377312_1 sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000002443 83.0
BYD3_k127_2383897_0 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 605.0
BYD3_k127_2383897_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000003962 61.0
BYD3_k127_2386970_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009199 601.0
BYD3_k127_2386970_1 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 457.0
BYD3_k127_2386970_4 cyclic nucleotide-binding K01420,K10914 - - 0.00000000000349 71.0
BYD3_k127_2388527_0 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000002747 195.0
BYD3_k127_2422547_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 302.0
BYD3_k127_2422547_1 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein - - - 0.0000000000000000000000000000000000001852 160.0
BYD3_k127_2422547_2 polysaccharide biosynthetic process - - - 0.00000000000000000000002447 115.0
BYD3_k127_2422547_3 Tripartite tricarboxylate transporter TctB family - - - 0.0004185 44.0
BYD3_k127_2422764_0 O-methyltransferase activity - GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 9.851e-216 693.0
BYD3_k127_2422764_1 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000842 120.0
BYD3_k127_2422764_2 Glycosyltransferase family 87 - - - 0.000000000000000000000009932 114.0
BYD3_k127_2424055_0 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431 - 3.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 326.0
BYD3_k127_2424055_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000002186 63.0
BYD3_k127_2425028_0 Flotillin K07192 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 362.0
BYD3_k127_2425028_1 RNA polymerase sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000003246 195.0
BYD3_k127_2425028_2 Putative zinc-finger - - - 0.0000000000000000000000000000000000000000000000000001346 199.0
BYD3_k127_2425028_3 cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000002632 161.0
BYD3_k127_2425028_4 Membrane protein implicated in regulation of membrane protease activity - - - 0.00003951 53.0
BYD3_k127_2431890_0 glycosyl transferase group 1 K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 414.0
BYD3_k127_2431890_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 362.0
BYD3_k127_2431890_2 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 356.0
BYD3_k127_2431890_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000963 349.0
BYD3_k127_2431890_4 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 338.0
BYD3_k127_2431890_5 oligoendopeptidase F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006064 323.0
BYD3_k127_2431890_6 GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000982 104.0
BYD3_k127_2431890_7 PFAM peptidase M16 domain protein K07263 - - 0.000000006744 64.0
BYD3_k127_2432772_0 beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 323.0
BYD3_k127_2432772_1 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000009829 192.0
BYD3_k127_2432772_2 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000002096 165.0
BYD3_k127_2433935_0 Protein of unknown function (DUF1573) - - - 0.00000009954 62.0
BYD3_k127_2433935_1 BON domain - - - 0.00001203 49.0
BYD3_k127_2435383_0 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000003239 115.0
BYD3_k127_2435383_1 - - - - 0.000000000000000006496 89.0
BYD3_k127_2435606_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 7.466e-312 975.0
BYD3_k127_2435606_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000005842 221.0
BYD3_k127_2435606_2 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.0000000000000000000002562 97.0
BYD3_k127_2435606_3 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000025 48.0
BYD3_k127_2452510_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 424.0
BYD3_k127_2452510_1 IstB-like ATP binding protein K02315 - - 0.0000000000000000000000000000000000000000000000000000000000000000004177 236.0
BYD3_k127_2452510_2 four-way junction helicase activity K03550 GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.00000000000000000000000000000000000000000000000004354 189.0
BYD3_k127_2452510_3 AAA domain K01090 - 3.1.3.16 0.00000000000000000000000000000000000002074 150.0
BYD3_k127_2452510_4 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.0000000000000000000002232 109.0
BYD3_k127_2452510_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000004979 105.0
BYD3_k127_2453219_0 efflux transmembrane transporter activity K02004 - - 7.04e-201 654.0
BYD3_k127_2453219_1 PFAM Collagen-binding surface protein Cna-like, B-type domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 332.0
BYD3_k127_2453219_2 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000075 314.0
BYD3_k127_2453219_3 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000003386 248.0
BYD3_k127_2453219_4 glycerophosphoryl diester phosphodiesterase K01113,K01126 - 3.1.3.1,3.1.4.46 0.00000000000000000000000000000000000000000000000000004747 199.0
BYD3_k127_2453219_5 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000003163 180.0
BYD3_k127_2453219_6 Domains in Na-Ca exchangers and integrin-beta4 K01406 - 3.4.24.40 0.00000000000000000000000000000000329 151.0
BYD3_k127_2453219_7 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000007851 80.0
BYD3_k127_2453219_8 bacterial-type flagellum-dependent cell motility - - - 0.000000001048 71.0
BYD3_k127_2453219_9 FG-GAP repeat - - - 0.000000009955 70.0
BYD3_k127_2484651_0 Replicative DNA helicase K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 297.0
BYD3_k127_2484651_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001339 283.0
BYD3_k127_2498750_0 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008696 459.0
BYD3_k127_2498750_1 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000000000000000000000048 167.0
BYD3_k127_2501776_0 Glycosyl hydrolases family 16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007572 370.0
BYD3_k127_2501776_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004501 298.0
BYD3_k127_2501776_2 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.0000000000000000000000000000000000000000000000000000005579 203.0
BYD3_k127_2501776_3 amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000003535 182.0
BYD3_k127_2501776_4 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000001917 138.0
BYD3_k127_2501776_5 Belongs to the Dps family K04047 - - 0.00000000000000000000000002192 109.0
BYD3_k127_2503520_0 Cold shock protein K03704 - - 0.000000000000000000000004144 102.0
BYD3_k127_2503520_1 domain, Protein - - - 0.0001065 50.0
BYD3_k127_2513237_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 420.0
BYD3_k127_2513237_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000004129 175.0
BYD3_k127_2513237_2 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000002029 148.0
BYD3_k127_2513237_3 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000006919 118.0
BYD3_k127_2513237_4 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000007377 106.0
BYD3_k127_2529711_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00256 - 1.3.99.16 1.587e-273 860.0
BYD3_k127_2529711_1 Protein of unknown function (DUF3500) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 434.0
BYD3_k127_2529711_2 Cation transport regulator - - - 0.00000000000000000000000000000000000000000000000000000000000001555 219.0
BYD3_k127_2529711_3 [2Fe-2S] binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000478 214.0
BYD3_k127_2529711_4 CBS domain containing protein K03699 - - 0.00000000000000000000000000007826 117.0
BYD3_k127_2529711_5 bacterial OsmY and nodulation domain - - - 0.0000000000000000000002414 110.0
BYD3_k127_2579117_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007714 478.0
BYD3_k127_2579117_1 SpoIID LytB domain protein K06381 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 436.0
BYD3_k127_2579117_2 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004768 349.0
BYD3_k127_2579117_3 Domain of unknown function (DUF4922) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003405 250.0
BYD3_k127_2579117_4 Plasmid segregation protein ParM K18640 - - 0.00000005568 64.0
BYD3_k127_258126_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 392.0
BYD3_k127_258126_1 Chromate transporter K07240 - - 0.000000000000000000000000000000000000000000000009144 173.0
BYD3_k127_2588663_0 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 552.0
BYD3_k127_2589107_0 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006503 440.0
BYD3_k127_2596224_0 efflux transmembrane transporter activity K02004 - - 2.375e-218 702.0
BYD3_k127_2630527_0 COGs COG1253 Hemolysins and related protein containing CBS domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006949 336.0
BYD3_k127_2630527_1 response regulator, receiver K13069,K18967 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0052621 2.7.7.65 0.0000000000000000000000000000000000397 146.0
BYD3_k127_2630527_2 Diacylglycerol kinase catalytic domain - - - 0.000000000000000000000000003097 119.0
BYD3_k127_2634424_0 Carboxypeptidase regulatory-like domain - - - 6.089e-264 849.0
BYD3_k127_2634424_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 630.0
BYD3_k127_2634424_2 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 508.0
BYD3_k127_2634424_3 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007091 381.0
BYD3_k127_2634424_4 Predicted membrane protein (DUF2339) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001175 280.0
BYD3_k127_2634424_5 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000006295 167.0
BYD3_k127_2634424_6 - - - - 0.00000000000000000000000000001916 122.0
BYD3_k127_2634424_7 TPR repeat - - - 0.000000000000001174 88.0
BYD3_k127_2638106_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 303.0
BYD3_k127_2638657_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 491.0
BYD3_k127_2638657_1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.0000000000000000000004509 102.0
BYD3_k127_2638657_2 GTP-binding protein TypA K06207 - - 0.000001686 51.0
BYD3_k127_2656294_0 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004393 323.0
BYD3_k127_265800_0 Transcriptional regulator K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 387.0
BYD3_k127_265800_1 Kelch motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006858 311.0
BYD3_k127_265800_2 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0008150,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.0000000000000000000000000000002149 125.0
BYD3_k127_265800_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000003888 119.0
BYD3_k127_265800_4 Uncharacterised protein family (UPF0182) K09118 - - 0.000000000747 64.0
BYD3_k127_2662220_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009116 408.0
BYD3_k127_2662348_0 Lipopolysaccharide-assembly - - - 0.00000000000000000000002538 106.0
BYD3_k127_2662348_1 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.000000008682 65.0
BYD3_k127_2664547_0 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 539.0
BYD3_k127_2689504_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.000000000000000000000003774 103.0
BYD3_k127_2689504_1 Peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000000001912 107.0
BYD3_k127_2689504_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0002762 46.0
BYD3_k127_2695628_0 WD40 domain protein beta Propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005412 255.0
BYD3_k127_2695628_1 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000137 251.0
BYD3_k127_2695628_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000003003 251.0
BYD3_k127_2711955_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 548.0
BYD3_k127_2711955_1 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000001106 106.0
BYD3_k127_2714391_0 Hydrolases of the alpha beta superfamily K06889 - - 0.00000000276 69.0
BYD3_k127_2714391_1 Serine aminopeptidase, S33 K06889 - - 0.000000006412 68.0
BYD3_k127_2715403_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 364.0
BYD3_k127_2715403_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007219 331.0
BYD3_k127_2719018_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 346.0
BYD3_k127_2719018_1 Carbon-nitrogen hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 301.0
BYD3_k127_2719018_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0001119 53.0
BYD3_k127_2719018_2 Transglutaminase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 316.0
BYD3_k127_2719018_3 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 296.0
BYD3_k127_2719018_4 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002179 272.0
BYD3_k127_2719018_5 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000647 182.0
BYD3_k127_2719018_6 Protein of unknown function (DUF1203) - - - 0.0000000000000000000000000000000000000000000000002646 180.0
BYD3_k127_2719018_7 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000006042 173.0
BYD3_k127_2719018_8 beta-lactamase K01286 - 3.4.16.4 0.00000000000000005111 93.0
BYD3_k127_2719018_9 Beta-lactamase - - - 0.00000000001213 71.0
BYD3_k127_2721634_0 undecaprenyl-diphosphatase activity K06153 GO:0006950,GO:0008150,GO:0050896,GO:0051409 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000001345 237.0
BYD3_k127_2721634_1 PBS lyase HEAT-like repeat - - - 0.000000000000000000000000001446 130.0
BYD3_k127_2721634_2 sequence-specific DNA binding - - - 0.000001692 56.0
BYD3_k127_2732592_0 AbgT putative transporter family K12942 - - 6.304e-220 692.0
BYD3_k127_2732592_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 558.0
BYD3_k127_2732592_2 Arylsulfatase a K01133 - 3.1.6.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 342.0
BYD3_k127_2742926_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 1.446e-277 880.0
BYD3_k127_2742926_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850,K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000814 362.0
BYD3_k127_2742926_2 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001603 261.0
BYD3_k127_2742926_3 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000000004672 119.0
BYD3_k127_2742926_4 Universal bacterial protein YeaZ K14742 - - 0.00000000000000000002602 100.0
BYD3_k127_2742926_5 Glycosyl transferases group 1 - - - 0.0000000000000000002804 93.0
BYD3_k127_2755722_0 Pyrimidine nucleoside phosphorylase C-terminal domain K00756,K00758 GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009032,GO:0016740,GO:0016757,GO:0016758,GO:0016763,GO:0044424,GO:0044444,GO:0044464 2.4.2.2,2.4.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 466.0
BYD3_k127_2755722_1 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 377.0
BYD3_k127_2755722_2 Asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 359.0
BYD3_k127_2755722_3 Large family of predicted nucleotide-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000001217 212.0
BYD3_k127_2755722_4 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000001766 213.0
BYD3_k127_2755722_5 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000002059 210.0
BYD3_k127_2759822_0 metal-dependent phosphohydrolase HD region - - - 0.000000000000000000000000000000000000000000000000000004422 210.0
BYD3_k127_2759822_1 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.00000000000000000000000003064 109.0
BYD3_k127_2759822_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767 - 5.2.1.8 0.00000000000001066 76.0
BYD3_k127_2759822_3 PFAM Ethanolamine utilisation protein EutN carboxysome K04028 - - 0.000000000001033 71.0
BYD3_k127_2772264_0 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 369.0
BYD3_k127_2772264_1 Putative integral membrane protein (DUF2391) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 336.0
BYD3_k127_2772264_2 multisubunit Na H antiporter MnhE subunit K05569 - - 0.000000000000000000000000000000000000000000000000000000000175 207.0
BYD3_k127_2772264_3 Proton-conducting membrane transporter K05568 - - 0.0000000000000000000000000000000000000000000000006544 178.0
BYD3_k127_2772264_4 TIGRFAM monovalent cation proton antiporter, MnhG PhaG subunit K05571 - - 0.000000000000000000000000000000000006491 141.0
BYD3_k127_2772264_5 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000002839 111.0
BYD3_k127_2772264_6 Multiple resistance and pH regulation protein F (MrpF / PhaF) K05570 - - 0.00000000000000000004927 93.0
BYD3_k127_2787300_0 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 631.0
BYD3_k127_2787300_1 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 300.0
BYD3_k127_2787300_2 TAP-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000003682 233.0
BYD3_k127_2794737_0 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 380.0
BYD3_k127_2794737_1 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000004419 280.0
BYD3_k127_2794737_2 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000000000000001026 218.0
BYD3_k127_2794737_3 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000007299 208.0
BYD3_k127_2794737_4 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000006293 131.0
BYD3_k127_2794737_5 - - - - 0.00000000000000000000000466 105.0
BYD3_k127_2795861_0 Fibronectin type 3 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004703 479.0
BYD3_k127_2795861_1 - - - - 0.00000004686 63.0
BYD3_k127_2805456_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 428.0
BYD3_k127_2805456_1 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003108 273.0
BYD3_k127_2805456_2 PFAM DAHP synthetase I K03856,K04516 - 2.5.1.54,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000001707 249.0
BYD3_k127_2805456_3 PFAM Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000006334 213.0
BYD3_k127_2805797_0 Transposase K07487 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006052 567.0
BYD3_k127_2811176_0 WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007718 262.0
BYD3_k127_2813191_0 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.2.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 411.0
BYD3_k127_2813191_1 with different specificities (related to short-chain alcohol K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 298.0
BYD3_k127_2813191_2 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000006542 147.0
BYD3_k127_281685_0 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005402 331.0
BYD3_k127_281685_1 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K02003,K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000111 268.0
BYD3_k127_2819899_0 Aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 516.0
BYD3_k127_2819899_1 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000007209 191.0
BYD3_k127_2836758_0 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 531.0
BYD3_k127_2836758_1 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000007543 231.0
BYD3_k127_2841502_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 490.0
BYD3_k127_2841502_1 MobA-like NTP transferase domain K00966 GO:0002164,GO:0002376,GO:0002520,GO:0003674,GO:0003824,GO:0004475,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006464,GO:0006486,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008905,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009226,GO:0009298,GO:0009791,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019538,GO:0019673,GO:0030097,GO:0030154,GO:0032501,GO:0032502,GO:0034641,GO:0034645,GO:0034654,GO:0035166,GO:0035167,GO:0036211,GO:0042692,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0048468,GO:0048513,GO:0048534,GO:0048542,GO:0048569,GO:0048731,GO:0048732,GO:0048747,GO:0048856,GO:0048869,GO:0051146,GO:0055001,GO:0055002,GO:0055086,GO:0061061,GO:0070085,GO:0070568,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.13 0.00000000000002799 73.0
BYD3_k127_2851703_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005675 581.0
BYD3_k127_2851703_1 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000000005607 205.0
BYD3_k127_285425_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000005837 182.0
BYD3_k127_285425_1 LacY proton/sugar symporter - - - 0.0000000000000000000000000000000000000000000001344 184.0
BYD3_k127_285425_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000542 146.0
BYD3_k127_285425_3 Prolyl oligopeptidase family - - - 0.000000000000000000000000000002384 132.0
BYD3_k127_2858965_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 2.071e-316 994.0
BYD3_k127_2858965_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005744 320.0
BYD3_k127_2858965_2 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 298.0
BYD3_k127_2858965_3 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000001714 191.0
BYD3_k127_2863499_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 472.0
BYD3_k127_2863499_1 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 361.0
BYD3_k127_2863499_2 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 329.0
BYD3_k127_2869717_0 efflux transmembrane transporter activity - - - 5.063e-251 798.0
BYD3_k127_2869717_1 Prolyl oligopeptidase family K06889 - - 0.0000000000000000000000000000000000000000809 163.0
BYD3_k127_2869717_2 4Fe-4S single cluster domain - - - 0.00000000000000008761 80.0
BYD3_k127_2879284_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008205 304.0
BYD3_k127_2879284_1 PFAM Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000001378 220.0
BYD3_k127_2879284_2 PFAM ResB family protein K07399 - - 0.000000000000000000000000000000000000000000739 175.0
BYD3_k127_2879284_3 - - - - 0.0000000000000000000000000000000006771 151.0
BYD3_k127_2879646_0 Penicillin amidase K07116 - 3.5.1.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003049 279.0
BYD3_k127_2880459_0 efflux transmembrane transporter activity K02004 - - 2.491e-218 704.0
BYD3_k127_2880459_1 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 1.047e-211 683.0
BYD3_k127_2882062_0 Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system K10441,K10545 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005508 568.0
BYD3_k127_2882062_1 D-xylose transmembrane transport K10543 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005975,GO:0005996,GO:0006810,GO:0008150,GO:0008152,GO:0008643,GO:0015749,GO:0015750,GO:0015753,GO:0019321,GO:0030246,GO:0030288,GO:0030313,GO:0031975,GO:0034219,GO:0036094,GO:0042597,GO:0042732,GO:0044238,GO:0044281,GO:0044464,GO:0048029,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 408.0
BYD3_k127_2882062_2 carbohydrate transport K10544 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 401.0
BYD3_k127_2890100_0 SNF2 family N-terminal domain - - - 0.0 1071.0
BYD3_k127_2890100_1 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 4.938e-223 706.0
BYD3_k127_2890100_2 Transglycosylase SLT domain K08309 - - 0.0000000000000000000001906 106.0
BYD3_k127_2890100_3 peptidyl-tyrosine sulfation - - - 0.0001393 44.0
BYD3_k127_2890499_0 Transcriptional regulator K03641 - - 0.000000000000000000000000000000000000000000000005828 189.0
BYD3_k127_2893201_0 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007132 286.0
BYD3_k127_2893201_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K07516 - 1.1.1.35 0.000000000000000000000003263 104.0
BYD3_k127_2894781_0 Cyclomaltodextrinase, N-terminal K21575 - 3.2.1.135 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 623.0
BYD3_k127_2894781_1 TPR repeat-containing protein - - - 0.00000004765 63.0
BYD3_k127_2903178_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 397.0
BYD3_k127_2903178_1 PFAM YdjC family protein K03478 - 3.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009085 306.0
BYD3_k127_2903178_2 Cys/Met metabolism PLP-dependent enzyme K01739,K01760,K01761 - 2.5.1.48,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000006665 153.0
BYD3_k127_2913823_0 - - - - 0.0000000000000000000000000000000000000000000000000000005579 203.0
BYD3_k127_2913823_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000002085 73.0
BYD3_k127_2921212_0 PFAM Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000008825 236.0
BYD3_k127_2921212_1 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.00000000000000000000000000000000000000000000000000000000000001582 223.0
BYD3_k127_2921212_2 PFAM gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000009448 205.0
BYD3_k127_2921212_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000002991 86.0
BYD3_k127_2927163_0 Malate synthase K01638 - 2.3.3.9 3.716e-223 703.0
BYD3_k127_2927163_1 Phosphoenolpyruvate phosphomutase K01637 - 4.1.3.1 6.351e-206 648.0
BYD3_k127_2927163_10 ornithine cyclodeaminase activity K01750,K19244 - 1.4.1.1,4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 327.0
BYD3_k127_2927163_11 Belongs to the phosphoenolpyruvate carboxykinase (ATP) family K01610 - 4.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 308.0
BYD3_k127_2927163_12 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001504 265.0
BYD3_k127_2927163_13 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000002132 225.0
BYD3_k127_2927163_14 Transcriptional regulator IclR - - - 0.00000000000000000000000000000000000000000000000000000001187 207.0
BYD3_k127_2927163_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000004951 177.0
BYD3_k127_2927163_16 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000008899 171.0
BYD3_k127_2927163_17 protein possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000000000000001101 164.0
BYD3_k127_2927163_18 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000002097 151.0
BYD3_k127_2927163_19 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000001872 146.0
BYD3_k127_2927163_2 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 2.24e-199 636.0
BYD3_k127_2927163_20 von Willebrand factor, type A - - - 0.00000000000000000000000000000000007058 147.0
BYD3_k127_2927163_21 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.0000000000000000000000004475 111.0
BYD3_k127_2927163_22 Putative peptidoglycan binding domain - - - 0.00000000001401 74.0
BYD3_k127_2927163_23 Belongs to the 5'-nucleotidase family - - - 0.000000001399 70.0
BYD3_k127_2927163_24 Protein of unknown function (DUF1579) - - - 0.0000002025 60.0
BYD3_k127_2927163_3 Hydantoinaseoxoprolinase domain protein K01473 - 3.5.2.14 2.203e-196 632.0
BYD3_k127_2927163_4 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008734 584.0
BYD3_k127_2927163_5 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0052855,GO:0052856,GO:0052857 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 417.0
BYD3_k127_2927163_6 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 404.0
BYD3_k127_2927163_7 DNA topoisomerase VI subunit A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000965 348.0
BYD3_k127_2927163_8 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 344.0
BYD3_k127_2927163_9 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009432 329.0
BYD3_k127_293794_0 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004652 441.0
BYD3_k127_293794_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000001575 148.0
BYD3_k127_2942011_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007871 528.0
BYD3_k127_2942011_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 349.0
BYD3_k127_2942011_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 331.0
BYD3_k127_2942011_3 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001643 246.0
BYD3_k127_2942011_4 Belongs to the SEDS family K03588 - - 0.000000000000000000001639 100.0
BYD3_k127_2942011_5 Cell division protein FtsQ K03589 - - 0.0000004936 61.0
BYD3_k127_2967762_0 thiamine diphosphate biosynthetic process K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 370.0
BYD3_k127_2967762_1 PFAM peptidase S16 lon domain protein K07157 - - 0.00000000000000000000000004059 117.0
BYD3_k127_2967762_2 - - - - 0.0000000000000001812 89.0
BYD3_k127_2969377_0 heat shock protein 70 K04043,K04044 - - 9.356e-215 683.0
BYD3_k127_2969377_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008337 431.0
BYD3_k127_2969377_2 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000001286 223.0
BYD3_k127_2969377_3 PFAM heat shock protein DnaJ K04082 - - 0.0000000000000000000000000000000000000000000000000000007795 199.0
BYD3_k127_2969377_4 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.0000000000000000000000000000000000004155 145.0
BYD3_k127_2969377_5 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000005787 133.0
BYD3_k127_2969377_6 FeS assembly protein IscX - - - 0.000000000000000000000000003203 111.0
BYD3_k127_2969377_7 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000001294 68.0
BYD3_k127_2969377_8 FeS cluster assembly scaffold protein NifU K04488 - - 0.000000001843 59.0
BYD3_k127_2990436_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000818 175.0
BYD3_k127_2990436_1 - - - - 0.000000000000000000000000000000000004536 141.0
BYD3_k127_3001865_0 Prolyl oligopeptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 532.0
BYD3_k127_3001865_1 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009324 516.0
BYD3_k127_3001865_2 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007385 469.0
BYD3_k127_3001865_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009592 374.0
BYD3_k127_3001865_4 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000001146 244.0
BYD3_k127_3001865_5 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000006976 50.0
BYD3_k127_3004216_0 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 444.0
BYD3_k127_3004216_1 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006171 377.0
BYD3_k127_3004216_2 PFAM ABC transporter related K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 333.0
BYD3_k127_3004216_3 COG1682 ABC-type polysaccharide polyol phosphate export systems, permease component K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006657 290.0
BYD3_k127_3004216_4 Subtilase family - - - 0.0000000000000000000008392 111.0
BYD3_k127_3004970_0 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 1.535e-223 701.0
BYD3_k127_3004970_1 Acetyltransferase (GNAT) domain K03827 - - 0.00000000000000000000000000000000000000000000000000000004088 199.0
BYD3_k127_3004970_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000004648 131.0
BYD3_k127_3004970_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000009554 127.0
BYD3_k127_301315_0 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000002973 184.0
BYD3_k127_3032525_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1158.0
BYD3_k127_3041307_0 efflux transmembrane transporter activity - - - 1.524e-226 728.0
BYD3_k127_304433_0 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000001767 143.0
BYD3_k127_304433_1 Major Facilitator Superfamily - - - 0.000001621 58.0
BYD3_k127_3045302_0 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000008616 96.0
BYD3_k127_3062194_0 - - - - 0.000000003361 68.0
BYD3_k127_3062194_1 TIGRFAM TonB K03832 - - 0.00002006 56.0
BYD3_k127_3062194_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00008326 45.0
BYD3_k127_3070991_0 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003346 334.0
BYD3_k127_3070991_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002568 287.0
BYD3_k127_3085681_0 Protein involved in outer membrane biogenesis K07289 - - 0.000003684 59.0
BYD3_k127_3085681_1 AsmA-like C-terminal region K07289 - - 0.00002621 56.0
BYD3_k127_3088591_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00322 - 1.6.1.1 4.826e-233 727.0
BYD3_k127_3088591_1 ROK family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009495 325.0
BYD3_k127_3088591_2 PFAM phospholipid glycerol acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000004238 245.0
BYD3_k127_3088591_3 von Willebrand factor (vWF) type A domain K02448 - - 0.00000000000000000000000000009549 117.0
BYD3_k127_3095730_0 Tetratricopeptide repeats K12132 - 2.7.11.1 4.934e-200 653.0
BYD3_k127_3095730_1 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 617.0
BYD3_k127_3095730_2 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 599.0
BYD3_k127_3095730_3 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000000002776 199.0
BYD3_k127_3095730_4 Lactonase, 7-bladed beta-propeller - - - 0.00000000000000000005422 98.0
BYD3_k127_3101396_0 Sigma factor PP2C-like phosphatases K07315,K07680 - 2.7.13.3,3.1.3.3 1.886e-211 686.0
BYD3_k127_3101396_1 Trehalose utilisation K08685 - 1.4.9.1 0.00000000000000000000000000000000000000000000000000000000001122 214.0
BYD3_k127_3101396_2 PFAM multi antimicrobial extrusion protein - - - 0.000003549 49.0
BYD3_k127_310186_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 3.633e-300 935.0
BYD3_k127_310186_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 439.0
BYD3_k127_310186_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003733 260.0
BYD3_k127_310186_3 Subtilase family - - - 0.000000000000000000000000000000000000006899 158.0
BYD3_k127_310186_4 Fibronectin type 3 domain - - - 0.0000000000000000000000000000000000001566 157.0
BYD3_k127_3104635_0 Acyl-CoA dehydrogenase, C-terminal domain K00248,K09478 - 1.3.8.1,1.3.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 573.0
BYD3_k127_3104635_1 Domain of unknown function (DUF4162) K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 352.0
BYD3_k127_3104635_2 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002919 286.0
BYD3_k127_3106555_0 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005099 305.0
BYD3_k127_3106555_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 319.0
BYD3_k127_3116850_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 321.0
BYD3_k127_3116850_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004012 278.0
BYD3_k127_3116850_2 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003083 274.0
BYD3_k127_3116850_3 Pkd domain containing protein K12567 - 2.7.11.1 0.000000000000000000000000000000000000005051 169.0
BYD3_k127_3116850_4 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000298 153.0
BYD3_k127_3116850_5 ketosteroid isomerase - - - 0.000000000000000000000000000000001201 141.0
BYD3_k127_3116850_6 Tetratricopeptide repeat - - - 0.000000000000002894 85.0
BYD3_k127_3116850_7 Tetratricopeptide repeat - - - 0.00000000000001815 87.0
BYD3_k127_3116850_8 6-phosphogluconolactonase activity - - - 0.0000004613 64.0
BYD3_k127_3120994_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 2.284e-274 857.0
BYD3_k127_3120994_1 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 598.0
BYD3_k127_3120994_2 serine threonine protein kinase afsK - - - 0.00000009682 56.0
BYD3_k127_3125093_0 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000009584 129.0
BYD3_k127_3137600_0 H( )-stimulated, divalent metal cation uptake system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 311.0
BYD3_k127_3137600_1 Periplasmic binding protein domain K10543 - - 0.00000005841 56.0
BYD3_k127_3137746_0 Heparinase II/III N-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000001502 246.0
BYD3_k127_3156334_0 ATPases associated with a variety of cellular activities K05847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 335.0
BYD3_k127_3156334_1 transmembrane transporter activity K08225 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007364 344.0
BYD3_k127_3156334_2 glutamate--cysteine ligase K01919 - 6.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000191 288.0
BYD3_k127_3156334_3 Histidine-specific methyltransferase, SAM-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000002707 241.0
BYD3_k127_3156334_4 Aerotolerance regulator BatC - - - 0.0004832 49.0
BYD3_k127_3156688_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005162 297.0
BYD3_k127_3156688_1 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000002817 226.0
BYD3_k127_3156688_2 ankyrin repeat protein - - - 0.00000000000000000000000000000002353 132.0
BYD3_k127_3156688_3 methyltransferase activity K15256 - - 0.0000000000000000000000000004068 124.0
BYD3_k127_3156688_4 PFAM sulfatase - - - 0.0000000000000000001148 92.0
BYD3_k127_3156688_5 PFAM sulfatase - - - 0.000000002824 57.0
BYD3_k127_3169075_0 ThiC-associated domain K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 8.59e-313 968.0
BYD3_k127_3169075_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006175 324.0
BYD3_k127_3169075_2 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000001011 241.0
BYD3_k127_3173159_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 569.0
BYD3_k127_3173159_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008566 361.0
BYD3_k127_3173159_2 DNA-templated transcription, initiation K02405 - - 0.00000000000000000000000000000000000000000000000000000000000209 213.0
BYD3_k127_3173159_3 PFAM OsmC family protein K04063 - - 0.00000000000000000000000000000000000000000000000000000000105 203.0
BYD3_k127_3173159_4 peptidyl-tyrosine sulfation - - - 0.000000000000000000003776 101.0
BYD3_k127_3173159_5 ChrR Cupin-like domain - - - 0.00000000000000005506 85.0
BYD3_k127_3173159_6 response regulator, receiver - - - 0.000000000001202 73.0
BYD3_k127_3173159_7 DNA-templated transcription, initiation K03088 - - 0.00002946 51.0
BYD3_k127_3175756_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 517.0
BYD3_k127_3175756_1 Thioesterase superfamily K07107 - - 0.0000000000000000000006033 101.0
BYD3_k127_3178796_0 Aldehyde dehydrogenase family K22445 - 1.2.99.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 422.0
BYD3_k127_3178796_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 361.0
BYD3_k127_3178796_2 Carboxypeptidase regulatory-like domain - - - 0.000000001775 61.0
BYD3_k127_3206213_0 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 338.0
BYD3_k127_3206213_1 COG0694 Thioredoxin-like proteins and domains - - - 0.000000000000000000000000006658 111.0
BYD3_k127_3206213_2 Serine aminopeptidase, S33 - - - 0.00000000000006017 78.0
BYD3_k127_3217619_0 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001306 281.0
BYD3_k127_3217619_1 amino acid peptide transporter K03305 - - 0.0000000001699 62.0
BYD3_k127_3217692_0 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 350.0
BYD3_k127_3217692_1 converts alpha-aldose to the beta-anomer - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008176 292.0
BYD3_k127_3217692_2 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family K16048 - - 0.000000000000000000000000000000000000000000005669 169.0
BYD3_k127_3217692_3 RDD family - - - 0.000000000000000000000000000000000000000000311 168.0
BYD3_k127_3217692_4 Trypsin - - - 0.00000000001156 76.0
BYD3_k127_3217692_5 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000539 43.0
BYD3_k127_3222688_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 578.0
BYD3_k127_3222688_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000002127 257.0
BYD3_k127_3222688_2 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000009997 210.0
BYD3_k127_3222688_3 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000008676 129.0
BYD3_k127_3222688_4 Chorismate mutase type II K03856,K04092,K04093,K04516,K13853 - 2.5.1.54,5.4.99.5 0.00000000000000000000001238 105.0
BYD3_k127_3227063_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000774 488.0
BYD3_k127_3232082_0 Berberine and berberine like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009446 484.0
BYD3_k127_3232082_1 Protein of unknown function (DUF962) - - - 0.0000000000000000000000000000000000000000002736 159.0
BYD3_k127_3232082_2 - - - - 0.0000000000000000000000000000000000000001607 154.0
BYD3_k127_3232082_3 - - - - 0.0000000000000000001298 98.0
BYD3_k127_3232527_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 379.0
BYD3_k127_3232527_1 cAMP biosynthetic process - - - 0.000000000000000001214 89.0
BYD3_k127_3236197_0 Dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 414.0
BYD3_k127_3236197_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008452 280.0
BYD3_k127_3236197_2 addiction module antidote protein, CC2985 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006365 256.0
BYD3_k127_3236197_3 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000007469 204.0
BYD3_k127_32482_0 DNA polymerase beta thumb K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 332.0
BYD3_k127_3250193_0 Chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000962 223.0
BYD3_k127_3250193_1 - - - - 0.00000000000000000000002047 103.0
BYD3_k127_3250193_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000004629 80.0
BYD3_k127_3250193_3 Amidohydrolase family - - - 0.0000000008363 60.0
BYD3_k127_3268602_0 Ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 402.0
BYD3_k127_3268602_1 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 342.0
BYD3_k127_3268602_2 peptidase S9 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004794 262.0
BYD3_k127_3273395_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 299.0
BYD3_k127_3273395_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000001285 173.0
BYD3_k127_329353_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 5.735e-196 623.0
BYD3_k127_329353_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 568.0
BYD3_k127_329353_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000005916 184.0
BYD3_k127_329353_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000001367 108.0
BYD3_k127_329353_4 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0043021,GO:0043022,GO:0043023,GO:0043086,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0098772 - 0.000003426 52.0
BYD3_k127_3293710_0 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 463.0
BYD3_k127_3293710_1 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000937 448.0
BYD3_k127_3293710_2 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 366.0
BYD3_k127_3293710_3 ATPase involved in replication control, Cdc46 Mcm family K10726 - - 0.00000000000000000000000001195 126.0
BYD3_k127_3305761_0 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000004881 181.0
BYD3_k127_3305761_1 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.000000000000000000000000000000000002207 145.0
BYD3_k127_3310442_0 PFAM PrkA AAA domain K07180 - - 1.738e-302 938.0
BYD3_k127_3310442_1 SpoVR like protein K06415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 557.0
BYD3_k127_3310442_2 Vault protein inter-alpha-trypsin domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 503.0
BYD3_k127_3310442_3 Belongs to the UPF0229 family K09786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 469.0
BYD3_k127_3310442_4 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 457.0
BYD3_k127_3310442_5 Lanthionine synthetase C-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 348.0
BYD3_k127_3310442_6 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0030312,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000005009 213.0
BYD3_k127_3310442_7 peptidyl-tyrosine sulfation - - - 0.00000002475 67.0
BYD3_k127_3311677_0 AMP-binding enzyme K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 431.0
BYD3_k127_3311677_1 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.000000000000000000000000000000000000000000000000000000000000000000000000004688 256.0
BYD3_k127_3311677_2 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.000000000000000000000000000000000000000000000000000000000000002064 229.0
BYD3_k127_3311677_3 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.000000000000000000000000000000000000000000000000000000000002389 214.0
BYD3_k127_3311677_4 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000002253 91.0
BYD3_k127_3311677_5 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000006176 86.0
BYD3_k127_3311677_6 AhpC/TSA antioxidant enzyme - - - 0.0000005519 57.0
BYD3_k127_3311677_7 PFAM AhpC TSA family - - - 0.0001344 46.0
BYD3_k127_3315849_0 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 320.0
BYD3_k127_3315849_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000001092 222.0
BYD3_k127_3318078_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 428.0
BYD3_k127_3318078_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.0000000000000000000000000000000000000000000001659 183.0
BYD3_k127_3323802_0 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 390.0
BYD3_k127_3323802_1 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000003091 234.0
BYD3_k127_3323802_2 COGs COG1432 conserved - - - 0.0000000000000000000000000000000000000000000000000000000000002333 218.0
BYD3_k127_3323802_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.0000000000000000000000000000000000002092 148.0
BYD3_k127_3323802_4 Cation transport ATPase K17686 - 3.6.3.54 0.0000000002376 66.0
BYD3_k127_332523_0 AcrB/AcrD/AcrF family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 570.0
BYD3_k127_332523_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005335 332.0
BYD3_k127_332523_2 Imidazoleglycerol-phosphate dehydratase K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000001407 243.0
BYD3_k127_332523_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000007932 235.0
BYD3_k127_332523_4 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001284 242.0
BYD3_k127_332523_5 Protein of unknown function (DUF2892) - - - 0.0000000000000000005264 89.0
BYD3_k127_332523_6 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000001428 70.0
BYD3_k127_3330992_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000006548 154.0
BYD3_k127_3330992_1 Short-chain dehydrogenase reductase sdr - - - 0.0007555 45.0
BYD3_k127_3336714_0 choline dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 496.0
BYD3_k127_3336714_1 Threonine dehydratase K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008883 450.0
BYD3_k127_3336714_2 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 406.0
BYD3_k127_3336714_3 pyridoxamine 5'-phosphate K07005 - - 0.00000000000000000000000000000000000000000000000000122 196.0
BYD3_k127_3336714_4 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000002609 161.0
BYD3_k127_3336714_5 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000008872 155.0
BYD3_k127_3336714_6 Transcriptional regulator - - - 0.000000000000000000000000009098 114.0
BYD3_k127_3350134_0 (ABC) transporter K06147,K18890 - - 1.148e-202 648.0
BYD3_k127_3350134_1 ABC transporter, transmembrane K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 582.0
BYD3_k127_3350134_2 Peptidase, M28 family - - - 0.0000000001983 63.0
BYD3_k127_3358111_0 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000557 554.0
BYD3_k127_3358111_1 Trehalose utilisation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009922 427.0
BYD3_k127_3358111_2 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002472 266.0
BYD3_k127_3358111_3 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 GO:0003674,GO:0003824,GO:0004462,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016151,GO:0016829,GO:0016846,GO:0019243,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042182,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046872,GO:0046914,GO:0051186,GO:0051596,GO:0061727,GO:0071704,GO:1901564,GO:1901575,GO:1901615 4.4.1.5 0.0004549 51.0
BYD3_k127_3360180_0 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000002028 189.0
BYD3_k127_3360180_1 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000001524 128.0
BYD3_k127_3363515_0 Subtilase family K14645 GO:0005575,GO:0005576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006199 278.0
BYD3_k127_3363515_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000001615 192.0
BYD3_k127_3363515_2 IrrE N-terminal-like domain K07110 - - 0.00000000001424 68.0
BYD3_k127_3365047_0 Domain of unknown function (DUF5117) - - - 3.391e-256 817.0
BYD3_k127_3365047_1 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000003013 220.0
BYD3_k127_3365047_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000002492 214.0
BYD3_k127_3374401_0 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 419.0
BYD3_k127_3374401_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 417.0
BYD3_k127_3374401_2 Glucose / Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006241 369.0
BYD3_k127_3374401_3 transcriptional regulator K21900 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 306.0
BYD3_k127_3374401_4 Glycosyl transferase family 41 K09667 GO:0000003,GO:0000123,GO:0000785,GO:0000791,GO:0001678,GO:0001932,GO:0001933,GO:0001934,GO:0002119,GO:0002164,GO:0002237,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0005488,GO:0005515,GO:0005543,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0006040,GO:0006041,GO:0006047,GO:0006048,GO:0006073,GO:0006091,GO:0006109,GO:0006110,GO:0006111,GO:0006112,GO:0006139,GO:0006140,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006470,GO:0006473,GO:0006475,GO:0006479,GO:0006486,GO:0006493,GO:0006508,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007444,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0007626,GO:0008080,GO:0008134,GO:0008150,GO:0008152,GO:0008194,GO:0008213,GO:0008219,GO:0008289,GO:0008361,GO:0008375,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009226,GO:0009605,GO:0009607,GO:0009617,GO:0009636,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009791,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010638,GO:0010646,GO:0010675,GO:0010799,GO:0010801,GO:0010876,GO:0010906,GO:0010941,GO:0012501,GO:0012505,GO:0015980,GO:0016020,GO:0016043,GO:0016262,GO:0016311,GO:0016407,GO:0016410,GO:0016485,GO:0016569,GO:0016570,GO:0016571,GO:0016573,GO:0016579,GO:0016740,GO:0016746,GO:0016747,GO:0016757,GO:0016758,GO:0016787,GO:0016788,GO:0016791,GO:0018022,GO:0018023,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019725,GO:0019904,GO:0019915,GO:0022607,GO:0023051,GO:0023052,GO:0030141,GO:0030162,GO:0030246,GO:0030808,GO:0030811,GO:0030900,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031667,GO:0031974,GO:0031981,GO:0031982,GO:0032259,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032387,GO:0032434,GO:0032435,GO:0032496,GO:0032501,GO:0032502,GO:0032535,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032922,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033135,GO:0033137,GO:0033157,GO:0033218,GO:0033500,GO:0033993,GO:0034284,GO:0034641,GO:0034645,GO:0034654,GO:0034968,GO:0035020,GO:0035091,GO:0035220,GO:0035295,GO:0035556,GO:0036094,GO:0036211,GO:0036477,GO:0040024,GO:0042176,GO:0042177,GO:0042221,GO:0042277,GO:0042325,GO:0042326,GO:0042327,GO:0042578,GO:0042588,GO:0042592,GO:0042593,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043255,GO:0043412,GO:0043413,GO:0043414,GO:0043434,GO:0043467,GO:0043470,GO:0043543,GO:0043933,GO:0043967,GO:0043981,GO:0043982,GO:0043984,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044271,GO:0044281,GO:0044297,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045475,GO:0045793,GO:0045861,GO:0045862,GO:0045893,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0046349,GO:0046483,GO:0046578,GO:0046626,GO:0048015,GO:0048017,GO:0048029,GO:0048311,GO:0048312,GO:0048471,GO:0048511,GO:0048512,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051056,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051193,GO:0051196,GO:0051223,GO:0051224,GO:0051235,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051276,GO:0051291,GO:0051568,GO:0051604,GO:0051640,GO:0051641,GO:0051646,GO:0051704,GO:0051707,GO:0051716,GO:0055082,GO:0055086,GO:0055114,GO:0060255,GO:0060322,GO:0060341,GO:0060429,GO:0060548,GO:0061085,GO:0061087,GO:0061136,GO:0062012,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070085,GO:0070201,GO:0070206,GO:0070207,GO:0070208,GO:0070646,GO:0070647,GO:0070887,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071375,GO:0071396,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0080182,GO:0090066,GO:0090087,GO:0090313,GO:0090315,GO:0090317,GO:0097237,GO:0097363,GO:0097458,GO:0097708,GO:0099503,GO:0120025,GO:0140096,GO:1900037,GO:1900038,GO:1900076,GO:1900180,GO:1900182,GO:1900371,GO:1900542,GO:1901071,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901799,GO:1901981,GO:1902275,GO:1902493,GO:1902494,GO:1902531,GO:1902680,GO:1903050,GO:1903051,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1903426,GO:1903428,GO:1903506,GO:1903508,GO:1903533,GO:1903578,GO:1903827,GO:1903828,GO:1903829,GO:1904950,GO:1905269,GO:1905475,GO:1905476,GO:1990234,GO:2000058,GO:2000059,GO:2000112,GO:2000377,GO:2000379,GO:2001141,GO:2001169,GO:2001252 2.4.1.255 0.0000000000000000000000000000000000000000004463 176.0
BYD3_k127_3374401_5 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000001874 127.0
BYD3_k127_3375750_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000001088 173.0
BYD3_k127_3375750_1 PFAM Single-stranded nucleic acid binding R3H K06346 - - 0.0000000000000000000000008892 109.0
BYD3_k127_3381411_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 375.0
BYD3_k127_3381411_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003592 372.0
BYD3_k127_3387013_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007187 554.0
BYD3_k127_3387013_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007514 309.0
BYD3_k127_3387013_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001802 280.0
BYD3_k127_3387013_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 - - 0.0000000000003674 77.0
BYD3_k127_3396404_0 MacB-like periplasmic core domain - - - 7.196e-231 738.0
BYD3_k127_3396404_1 Belongs to the DNA glycosylase MPG family K03652 GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 0.00000000000000000000000000000000000002247 150.0
BYD3_k127_3404117_0 Phage tail tape measure protein TP901 - - - 0.0003691 51.0
BYD3_k127_3423627_0 Glycosyl hydrolases family 15 - - - 3.655e-259 811.0
BYD3_k127_3423627_1 PFAM peptidase M2, peptidyl-dipeptidase A K01283 - 3.4.15.1 5.833e-242 760.0
BYD3_k127_3423627_2 chlorophyll binding - - - 0.000000000000000000000000000000000000000000000000000000000000005513 229.0
BYD3_k127_3423627_3 CHRD domain - - - 0.0000000000000000000000000000000000001104 147.0
BYD3_k127_3423627_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000001838 115.0
BYD3_k127_3423627_5 Plasmid stabilization - - - 0.000000000000000000000002427 104.0
BYD3_k127_34259_0 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000000000000000000000000000000000000004983 215.0
BYD3_k127_34259_1 Outer membrane efflux protein K12340 - - 0.0000004287 53.0
BYD3_k127_3436724_0 Glycosyltransferases, probably involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000005 251.0
BYD3_k127_3436724_1 Glycosyl transferases group 1 K12994 - 2.4.1.349 0.000000000000000000000000000000000000000000000000001433 193.0
BYD3_k127_3436724_2 PFAM ABC transporter related K09691 - - 0.00000000000000000000003576 102.0
BYD3_k127_3447860_0 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 354.0
BYD3_k127_3448525_0 AcrB/AcrD/AcrF family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000002572 244.0
BYD3_k127_3459141_0 serine-type peptidase activity - - - 9.414e-298 931.0
BYD3_k127_3459141_1 Dehydrogenase K00030,K00052 - 1.1.1.41,1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006879 267.0
BYD3_k127_3459141_2 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009016 272.0
BYD3_k127_3459141_3 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.00000000000000000000000000000000000000000000000000009489 189.0
BYD3_k127_3459141_4 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000193 187.0
BYD3_k127_3459141_5 PFAM 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000001505 144.0
BYD3_k127_3465214_0 ASPIC and UnbV - - - 1.439e-195 627.0
BYD3_k127_3465214_1 glutamine-fructose-6-phosphate transaminase (isomerizing) activity K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 407.0
BYD3_k127_3465214_2 Putative carbohydrate binding domain K12373 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 386.0
BYD3_k127_3465214_3 TPR repeat - - - 0.00000000000000001834 95.0
BYD3_k127_3469131_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 6.32e-231 732.0
BYD3_k127_3469131_1 HlyD family secretion protein K02005 - - 0.0000000000000000000000009243 106.0
BYD3_k127_347640_0 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 586.0
BYD3_k127_347640_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000003363 242.0
BYD3_k127_347640_2 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000001049 175.0
BYD3_k127_347640_3 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000002979 160.0
BYD3_k127_3478218_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000009442 220.0
BYD3_k127_3478218_1 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000064 196.0
BYD3_k127_3478218_2 N-Acetylmuramoyl-L-alanine amidase K11066,K12287 - 3.5.1.28 0.000000000000000000000000000000000000000001912 169.0
BYD3_k127_3478218_3 PilZ domain K02676 - - 0.000003341 55.0
BYD3_k127_348661_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 405.0
BYD3_k127_348661_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000661 160.0
BYD3_k127_348661_2 Peptidase family M50 K11749 - - 0.0000000000000000000000000000000000003245 143.0
BYD3_k127_348661_3 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.0000000000000000000006567 100.0
BYD3_k127_3500466_0 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003184 267.0
BYD3_k127_3500466_1 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0000027,GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000001236 218.0
BYD3_k127_3500466_2 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000000006469 194.0
BYD3_k127_3500466_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000005833 158.0
BYD3_k127_3500466_4 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000003085 131.0
BYD3_k127_3500466_5 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000002524 102.0
BYD3_k127_3500466_6 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000001683 65.0
BYD3_k127_3500466_7 Ribosomal L29 protein K02904 - - 0.0000000001685 66.0
BYD3_k127_3504737_0 ATPase involved in DNA repair K03546 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005618 390.0
BYD3_k127_3512074_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000641 208.0
BYD3_k127_3513467_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.393e-216 694.0
BYD3_k127_3513467_1 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000000001931 183.0
BYD3_k127_3513467_2 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000589 96.0
BYD3_k127_3513467_3 Tetratricopeptide repeat - - - 0.000000000003472 76.0
BYD3_k127_3513467_4 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.000000000003812 74.0
BYD3_k127_351506_0 exonuclease K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005486 503.0
BYD3_k127_351506_1 TIGRFAM oligopeptide dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031,K02032,K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 401.0
BYD3_k127_351506_2 RNA polymerase sigma-54 factor K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004677 391.0
BYD3_k127_351506_3 ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 318.0
BYD3_k127_351506_4 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007772 305.0
BYD3_k127_351506_5 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07644 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000009593 261.0
BYD3_k127_351506_6 PTS system fructose IIA component K02793,K02794,K02821 - 2.7.1.191,2.7.1.194 0.0000000000000000000000000000000000404 138.0
BYD3_k127_351506_7 regulation of translation K05808,K05809 GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006417,GO:0006446,GO:0006448,GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0045947,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.0000000000000000000000008694 110.0
BYD3_k127_351506_8 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K09774 - - 0.0000000000000000000001835 114.0
BYD3_k127_351960_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850,K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 430.0
BYD3_k127_351960_1 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 407.0
BYD3_k127_351960_2 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000003719 201.0
BYD3_k127_351960_3 Bacterial SH3 domain - - - 0.00000000000000000000000002955 112.0
BYD3_k127_3519933_0 DEAD-like helicases superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 520.0
BYD3_k127_3519933_1 Protein of unknown function (DUF790) K09744 - - 0.00000000000000000004354 94.0
BYD3_k127_3523376_0 Penicillin-binding protein, transpeptidase domain protein K05364 - - 0.0000000000000000000000012 117.0
BYD3_k127_3523376_1 FHA domain - GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 - 0.00000006416 63.0
BYD3_k127_3548131_0 Peptidase family M1 domain - - - 1.781e-240 758.0
BYD3_k127_3548131_1 Belongs to the enoyl-CoA hydratase isomerase family K07516 - 1.1.1.35 3.034e-229 730.0
BYD3_k127_3548131_10 Domain of unknown function (DUF4252) - - - 0.000000000476 63.0
BYD3_k127_3548131_2 Belongs to the thiolase family K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007419 463.0
BYD3_k127_3548131_3 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006313 334.0
BYD3_k127_3548131_4 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 323.0
BYD3_k127_3548131_5 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 319.0
BYD3_k127_3548131_6 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000009215 153.0
BYD3_k127_3548131_7 ErfK YbiS YcfS YnhG family protein - - - 0.0000000000000000000000000000000003655 141.0
BYD3_k127_3548131_8 von Willebrand factor, type A - - - 0.000000000000000000000001978 119.0
BYD3_k127_3548131_9 - - - - 0.0000000000000000004023 102.0
BYD3_k127_3565172_0 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000003028 205.0
BYD3_k127_3565172_1 Psort location Cytoplasmic, score K00760 - 2.4.2.8 0.00000000000000000000000000000000003067 145.0
BYD3_k127_3567673_0 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000005432 127.0
BYD3_k127_3567673_1 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K04488 - - 0.0000000000000009189 80.0
BYD3_k127_3571552_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 455.0
BYD3_k127_3571552_1 PFAM Bacterial regulatory proteins, luxR family K03556 - - 0.000000001112 67.0
BYD3_k127_3608167_0 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 574.0
BYD3_k127_3608167_1 Hydrolase - - - 0.0000000000000000000000001641 111.0
BYD3_k127_3608239_0 membrane transporter protein K07090 - - 0.00000001424 59.0
BYD3_k127_3611621_0 Putative glutamine amidotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005594 294.0
BYD3_k127_3612_0 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000002145 96.0
BYD3_k127_361734_0 Carboxyl transferase domain K01969,K13778 - 6.4.1.4,6.4.1.5 8.125e-214 679.0
BYD3_k127_361734_1 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961,K01965,K01968 - 6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 573.0
BYD3_k127_361734_2 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 513.0
BYD3_k127_361734_3 Acyl-CoA dehydrogenase, C-terminal domain K11731 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 503.0
BYD3_k127_361734_4 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 410.0
BYD3_k127_361734_5 Pfam Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 354.0
BYD3_k127_361734_6 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005961 277.0
BYD3_k127_361734_7 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004996 255.0
BYD3_k127_361734_8 Bacterial regulatory proteins, tetR family K16137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001038 250.0
BYD3_k127_361734_9 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000002883 229.0
BYD3_k127_3618095_0 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000003279 170.0
BYD3_k127_3618095_1 - - - - 0.000000000000000000000000008336 111.0
BYD3_k127_3618095_2 - - - - 0.00000000000000000002015 94.0
BYD3_k127_3624452_0 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001947 277.0
BYD3_k127_3624452_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004694 265.0
BYD3_k127_3625255_0 glycyl-tRNA aminoacylation K01880 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009345,GO:0009987,GO:0010467,GO:0016070,GO:0016594,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042165,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000613 537.0
BYD3_k127_3625255_1 glucose sorbosone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 404.0
BYD3_k127_3625255_2 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 367.0
BYD3_k127_3625255_3 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 365.0
BYD3_k127_3625255_4 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000003649 215.0
BYD3_k127_3625255_5 Acid phosphatase homologues - - - 0.0000000000000000000000000001311 124.0
BYD3_k127_3625255_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000004585 63.0
BYD3_k127_3625255_7 PFAM FeoA family protein K04758 - - 0.000000005287 59.0
BYD3_k127_3669088_0 DNA repair exonuclease K03547 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 296.0
BYD3_k127_3669088_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000001021 143.0
BYD3_k127_3670319_0 Peptidase S46 - - - 3.473e-234 747.0
BYD3_k127_3670319_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1.364e-203 651.0
BYD3_k127_3670319_10 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001734 282.0
BYD3_k127_3670319_11 PFAM Aldose 1-epimerase K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000001196 190.0
BYD3_k127_3670319_12 Domain of unknown function (DUF4142) - - - 0.00000000000000000000000000000000004719 145.0
BYD3_k127_3670319_13 - - - - 0.0000000000000000000000000000000004633 137.0
BYD3_k127_3670319_14 DinB family - - - 0.000000000000000000000000002976 117.0
BYD3_k127_3670319_2 Penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005076 625.0
BYD3_k127_3670319_3 PFAM helix-turn-helix domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007957 358.0
BYD3_k127_3670319_4 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006548 318.0
BYD3_k127_3670319_5 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006999 314.0
BYD3_k127_3670319_6 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008075 319.0
BYD3_k127_3670319_7 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 303.0
BYD3_k127_3670319_8 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 298.0
BYD3_k127_3670319_9 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002738 280.0
BYD3_k127_3673287_0 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.000000000000000000000000004171 115.0
BYD3_k127_3688315_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1374.0
BYD3_k127_3688315_1 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008198 548.0
BYD3_k127_3688315_2 Transketolase, pyrimidine binding domain K00167 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005805 475.0
BYD3_k127_3688315_3 e3 binding domain K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 407.0
BYD3_k127_3688315_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 331.0
BYD3_k127_3688315_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006754 325.0
BYD3_k127_3688315_6 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 289.0
BYD3_k127_3688315_7 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000009096 231.0
BYD3_k127_3688315_8 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00363,K05710 - 1.7.1.15 0.00000000000000000000000000007617 123.0
BYD3_k127_3688315_9 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000002292 58.0
BYD3_k127_368927_0 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 591.0
BYD3_k127_368927_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000134 255.0
BYD3_k127_368927_2 membrane protein, TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000002676 225.0
BYD3_k127_368927_3 - - - - 0.0000000000007774 81.0
BYD3_k127_3692339_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840,K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 509.0
BYD3_k127_3692339_1 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004651 289.0
BYD3_k127_3692339_2 PFAM CobN magnesium chelatase K02230 - 6.6.1.2 0.00001937 57.0
BYD3_k127_3692450_0 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002436 295.0
BYD3_k127_3692450_1 - - - - 0.000005261 52.0
BYD3_k127_3718045_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007974 514.0
BYD3_k127_3718045_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 332.0
BYD3_k127_3718045_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000004963 167.0
BYD3_k127_3718045_5 helix_turn_helix, Lux Regulon - - - 0.0001422 45.0
BYD3_k127_3731574_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004997 308.0
BYD3_k127_3732464_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000002905 154.0
BYD3_k127_3732464_1 Predicted membrane protein (DUF2318) - - - 0.00000000000000000000000000000006261 131.0
BYD3_k127_3749532_0 SMART Elongator protein 3 MiaB NifB - - - 2.525e-234 757.0
BYD3_k127_3749532_1 cell shape determining protein MreB K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 525.0
BYD3_k127_3749532_2 Ribonuclease, Rne Rng family K08301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 529.0
BYD3_k127_3749532_3 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007965 435.0
BYD3_k127_3749532_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002794 316.0
BYD3_k127_3749532_5 Peptidase M61 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001643 298.0
BYD3_k127_3749532_6 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000001628 240.0
BYD3_k127_3749532_7 diguanylate cyclase - - - 0.00000000000000000000000000000000000000002173 160.0
BYD3_k127_3749532_8 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000123 152.0
BYD3_k127_3749532_9 shape-determining protein MreD K03571 - - 0.0000000001836 68.0
BYD3_k127_3760195_0 Carboxypeptidase regulatory-like domain - - - 2.48e-229 725.0
BYD3_k127_3760206_0 slime layer polysaccharide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007791 463.0
BYD3_k127_3760206_1 Male sterility protein K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008225 337.0
BYD3_k127_3760206_2 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 0.000000000000000000000001097 117.0
BYD3_k127_3760206_3 AMP-binding enzyme K01897 - 6.2.1.3 0.0000000000000000006915 96.0
BYD3_k127_3760206_4 haloacid dehalogenase-like hydrolase - - - 0.000000000000000783 92.0
BYD3_k127_3761368_0 extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001278 278.0
BYD3_k127_3761368_1 hydrolase, family 3 K01207 - 3.2.1.52 0.000000000000000000000000000000174 131.0
BYD3_k127_3762919_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 447.0
BYD3_k127_3762919_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000001164 169.0
BYD3_k127_3762919_2 Glycosyl transferase family 2 - - - 0.00000000000000000000000000002096 128.0
BYD3_k127_3774375_0 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 591.0
BYD3_k127_3774375_1 UDP-N-acetylglucosamine 2-epimerase K08068,K18429 - 3.2.1.183,3.2.1.184 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 556.0
BYD3_k127_3774375_10 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000002959 117.0
BYD3_k127_3774375_11 Sulfotransferase domain - - - 0.00000000000000001216 94.0
BYD3_k127_3774375_2 PFAM oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 499.0
BYD3_k127_3774375_3 COG1682 ABC-type polysaccharide polyol phosphate export systems, permease component K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004811 437.0
BYD3_k127_3774375_4 NeuB family K01654 - 2.5.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 421.0
BYD3_k127_3774375_5 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 358.0
BYD3_k127_3774375_6 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 330.0
BYD3_k127_3774375_7 CMP-N-acetylneuraminic acid synthetase K00983 - 2.7.7.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000007128 265.0
BYD3_k127_3774375_8 Sulfotransferase family - - - 0.0000000000000000000000000000000000000000000000000008718 195.0
BYD3_k127_3774375_9 N-acetylglucosaminylinositol deacetylase activity - - - 0.0000000000000000000000000000000000003346 153.0
BYD3_k127_3785808_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1059.0
BYD3_k127_3785808_1 N-Acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000002643 190.0
BYD3_k127_3806712_0 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 341.0
BYD3_k127_3806712_1 aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000001018 253.0
BYD3_k127_3806712_2 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000407 159.0
BYD3_k127_3806712_3 Putative transmembrane protein (PGPGW) - - - 0.00000000000002406 76.0
BYD3_k127_3810970_0 type II secretion system protein E K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 547.0
BYD3_k127_3810970_1 AAA domain K02282 - - 0.000000000000000000000000000000000000000254 164.0
BYD3_k127_3810970_2 Type II secretion system (T2SS), protein F K12510 - - 0.000000000000000000000000000000000000001239 156.0
BYD3_k127_3812706_0 Alpha beta superfamily - - - 0.000000000000000000003336 101.0
BYD3_k127_3819254_0 Belongs to the FGGY kinase family K00851 - 2.7.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 482.0
BYD3_k127_3819254_1 Predicted membrane protein (DUF2339) - - - 0.0000000000000000000007524 106.0
BYD3_k127_3819254_2 nuclear chromosome segregation - - - 0.0002329 50.0
BYD3_k127_3820397_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000134 260.0
BYD3_k127_3820397_1 Protein of unknown function (DUF1572) - - - 0.00000000000000000000002959 106.0
BYD3_k127_3820397_2 Tetratricopeptide repeat - - - 0.00000000000002434 85.0
BYD3_k127_3820397_3 SMART Transport-associated and nodulation - - - 0.00007461 51.0
BYD3_k127_3820397_4 outer membrane autotransporter barrel domain protein - - - 0.0003575 48.0
BYD3_k127_3823078_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.049e-267 844.0
BYD3_k127_3823078_1 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000007294 156.0
BYD3_k127_3823078_2 metal cluster binding - - - 0.0000000000000000000000000000000000000002263 157.0
BYD3_k127_3823078_3 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000001126 149.0
BYD3_k127_3823078_4 HAD-hyrolase-like - - - 0.000000000000000000000000000000000006296 138.0
BYD3_k127_3823078_5 serine-type peptidase activity K08676 - - 0.000000000000000000007461 95.0
BYD3_k127_3829019_0 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003367 284.0
BYD3_k127_3829019_1 Belongs to the phosphoglycerate kinase family K00927,K01803 - 2.7.2.3,5.3.1.1 0.000000000000000000000000000006561 119.0
BYD3_k127_3829019_2 Preprotein translocase SecG subunit K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000008379 67.0
BYD3_k127_3829019_3 Belongs to the 'phage' integrase family - - - 0.000000000211 70.0
BYD3_k127_3838264_0 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006403 318.0
BYD3_k127_3838264_1 Putative modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005903 321.0
BYD3_k127_383988_0 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001436 237.0
BYD3_k127_383988_1 Belongs to the SEDS family K03588 GO:0002682,GO:0002684,GO:0008150,GO:0009605,GO:0009607,GO:0009987,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051301,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0075136 - 0.00000000000000000000000000000000000003554 162.0
BYD3_k127_383988_2 PFAM von Willebrand factor type A K07114 - - 0.000000000000005751 85.0
BYD3_k127_383988_3 Penicillin-binding Protein K05364 - - 0.0000000000001704 74.0
BYD3_k127_3855881_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009335 595.0
BYD3_k127_3860820_0 - - - - 0.00000000000000000000000000000000000000000001159 181.0
BYD3_k127_3860820_1 Methylase involved in ubiquinone menaquinone K07755 - 2.1.1.137 0.0000000000000000000000002949 107.0
BYD3_k127_3873457_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000003986 252.0
BYD3_k127_3873457_1 Low affinity iron permease - - - 0.00000000000000000000000000000000000000004775 157.0
BYD3_k127_3873457_2 deoxyhypusine monooxygenase activity K18912 - 1.14.99.50 0.00000000000000000000000000000000000000009255 173.0
BYD3_k127_3873457_3 YceI-like domain - - - 0.0000000000000000000000000000000000292 142.0
BYD3_k127_3873457_4 amine dehydrogenase activity - - - 0.0000000000000000001361 102.0
BYD3_k127_3873457_5 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.000000152 55.0
BYD3_k127_3878726_0 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000863 447.0
BYD3_k127_3878726_1 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005605 286.0
BYD3_k127_3878726_2 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000001816 200.0
BYD3_k127_3879784_0 Sodium:solute symporter family - - - 0.00000000000000000000000000000000000000000000000000007749 195.0
BYD3_k127_3879784_1 general secretion pathway protein K10927 - - 0.000001227 59.0
BYD3_k127_3887519_0 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 475.0
BYD3_k127_3887872_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 434.0
BYD3_k127_3887872_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000001693 190.0
BYD3_k127_3887872_2 ErfK ybiS ycfS ynhG family protein K16291 - - 0.00000000000001654 86.0
BYD3_k127_3889594_0 Amidohydrolase family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 292.0
BYD3_k127_3889594_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000009509 216.0
BYD3_k127_3889594_2 - - - - 0.0000000000000000000000000000000000000000000000000000000008189 214.0
BYD3_k127_3889594_5 Protein of unknown function (DUF971) - - - 0.000000001982 64.0
BYD3_k127_3889662_0 Polymorphic membrane protein, Chlamydia - - - 0.000000000000000000000001315 119.0
BYD3_k127_3889662_1 Metallo-peptidase family M12 - - - 0.000000000000004509 77.0
BYD3_k127_3895264_0 MoaE protein K21142 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000000000006658 216.0
BYD3_k127_3895264_1 SMART Mov34 MPN PAD-1 family protein - - - 0.000000000000000001244 88.0
BYD3_k127_3895905_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 455.0
BYD3_k127_3905687_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1322.0
BYD3_k127_3905687_1 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 555.0
BYD3_k127_3905687_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 488.0
BYD3_k127_3905687_3 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000001256 214.0
BYD3_k127_3905687_4 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000001686 197.0
BYD3_k127_3905687_5 PFAM AhpC TSA family - - - 0.00000001079 58.0
BYD3_k127_3905687_6 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000109 57.0
BYD3_k127_3913016_0 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K03520 - 1.2.5.3 0.0 1027.0
BYD3_k127_3913016_1 xanthine dehydrogenase activity - - - 2.916e-229 732.0
BYD3_k127_3913016_10 - - - - 0.000000000001105 77.0
BYD3_k127_3913016_12 DnaJ molecular chaperone homology domain K05516 - - 0.00003185 56.0
BYD3_k127_3913016_2 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004969 496.0
BYD3_k127_3913016_3 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009841 477.0
BYD3_k127_3913016_4 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001763 282.0
BYD3_k127_3913016_5 CO dehydrogenase flavoprotein C-terminal domain K13479 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000007952 234.0
BYD3_k127_3913016_6 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000222 209.0
BYD3_k127_3913016_7 heme binding K03791 - - 0.00000000000000000000000000000000001183 144.0
BYD3_k127_3913016_8 cAMP biosynthetic process - - - 0.00000000000000000001644 95.0
BYD3_k127_3913016_9 Tn3 transposase DDE domain - - - 0.0000000000000004151 85.0
BYD3_k127_3913316_0 Bacillithiol biosynthesis BshC K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 356.0
BYD3_k127_3913316_1 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 341.0
BYD3_k127_3913316_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007985 332.0
BYD3_k127_3913316_3 Belongs to the DapA family K01714,K22397 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005975,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0019520,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046395,GO:0047440,GO:0071704,GO:0072329,GO:1901575 4.1.2.28,4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000001646 263.0
BYD3_k127_3913316_4 membrane protein, TerC K05794 - - 0.0000000000000000000000000000000000000000000000000009052 186.0
BYD3_k127_3921724_0 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004119 556.0
BYD3_k127_3921724_1 PHP domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 418.0
BYD3_k127_3921724_2 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 366.0
BYD3_k127_3921724_3 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000001643 109.0
BYD3_k127_3924556_0 Trehalose utilisation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 415.0
BYD3_k127_3924556_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000002138 189.0
BYD3_k127_3924556_2 Tetratricopeptide repeat - - - 0.000000000008519 74.0
BYD3_k127_3924556_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000001597 66.0
BYD3_k127_3924556_4 - - - - 0.000001698 59.0
BYD3_k127_3924556_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0006154 51.0
BYD3_k127_3928430_0 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000001709 68.0
BYD3_k127_3928430_1 TIGRFAM TIGR02453 family protein - - - 0.00003617 53.0
BYD3_k127_3931758_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000001205 241.0
BYD3_k127_3931758_1 Ribonuclease HII K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000003917 185.0
BYD3_k127_3931758_2 Tetratricopeptide repeat - - - 0.000000000000002147 80.0
BYD3_k127_3931758_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000005094 74.0
BYD3_k127_3944857_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 304.0
BYD3_k127_3953653_0 virulence factor MVIN family protein K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 495.0
BYD3_k127_3953653_1 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008498 366.0
BYD3_k127_3953653_2 HlyD family secretion protein K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 305.0
BYD3_k127_4001652_0 Bacterial extracellular solute-binding protein K02064 - - 0.0000000000000000000000000000000000000000000000000000000000000000001667 233.0
BYD3_k127_4001652_1 PFAM Thiamin pyrophosphokinase, catalytic region K00949 - 2.7.6.2 0.0000000000000000000000000000000001716 138.0
BYD3_k127_400971_0 PFAM LemA family protein K03744 - - 0.000000000000000000000000000000000000000000000000000000000008434 216.0
BYD3_k127_400971_1 Prolyl oligopeptidase family - - - 0.00000005622 57.0
BYD3_k127_4022259_0 Associated with various cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008616 392.0
BYD3_k127_4022259_1 MobA-Related Protein K07141 - 2.7.7.76 0.00000000000004329 74.0
BYD3_k127_4022259_2 von Willebrand factor, type A K07161 - - 0.0000000000002963 77.0
BYD3_k127_4025020_0 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 312.0
BYD3_k127_4025020_1 PFAM Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 299.0
BYD3_k127_4028920_0 Sh3 type 3 domain protein - - - 0.00003552 55.0
BYD3_k127_4036449_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006067 381.0
BYD3_k127_4036449_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009273 324.0
BYD3_k127_4036449_2 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000004765 206.0
BYD3_k127_4036449_3 Ca2 -binding protein (EF-Hand superfamily - - - 0.0006388 50.0
BYD3_k127_4059908_0 PFAM NHL repeat - - - 7.231e-199 639.0
BYD3_k127_4059908_1 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000008985 198.0
BYD3_k127_4059908_2 AntiSigma factor - - - 0.00000000000000000000000000000000000000001281 164.0
BYD3_k127_4059908_3 - - - - 0.00000000000000000000000000000000004182 138.0
BYD3_k127_4065668_0 Oxidoreductase molybdopterin binding domain K00387,K07147 - 1.8.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000009058 257.0
BYD3_k127_4066633_0 Peptidase family M23 K21472 - - 0.0000000000000000000000000000000000000000000000002913 184.0
BYD3_k127_4066633_1 PFAM PhoH family protein K06217 - - 0.000006327 51.0
BYD3_k127_4070008_0 efflux transmembrane transporter activity K02004 - - 5.607e-234 749.0
BYD3_k127_4070008_1 MacB-like periplasmic core domain - - - 1.638e-218 704.0
BYD3_k127_4079216_0 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 1.946e-219 691.0
BYD3_k127_4079216_1 Tetratricopeptide repeat - - - 0.000000000000000000113 104.0
BYD3_k127_4079430_0 TIGRFAM anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006149 595.0
BYD3_k127_4079430_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000002378 237.0
BYD3_k127_4079430_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000005773 203.0
BYD3_k127_4079430_3 - - - - 0.00000000000000000000000000000000000000000000000000001866 200.0
BYD3_k127_4079430_4 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000702 99.0
BYD3_k127_4080776_0 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004447 250.0
BYD3_k127_4080776_1 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000003923 235.0
BYD3_k127_4080776_2 Abc transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000002382 209.0
BYD3_k127_4087085_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 451.0
BYD3_k127_4087085_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000004471 239.0
BYD3_k127_4087085_2 Domain of unknown function (DUF4331) - - - 0.0000000000000000000000000000001881 138.0
BYD3_k127_4089652_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 431.0
BYD3_k127_4089652_1 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000000000000006638 114.0
BYD3_k127_4089652_2 ABC-type multidrug transport system ATPase component - - - 0.00000000000003891 86.0
BYD3_k127_4089652_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000004794 68.0
BYD3_k127_409054_0 PDZ domain (Also known as DHR or GLGF) K08372 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009289 317.0
BYD3_k127_409054_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003182 259.0
BYD3_k127_409054_2 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000000000000038 122.0
BYD3_k127_4091240_0 Response regulator receiver K03413 - - 0.0000000000000000000000476 102.0
BYD3_k127_4091240_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000002514 101.0
BYD3_k127_4102257_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 371.0
BYD3_k127_4102257_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004418 318.0
BYD3_k127_4102257_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006236 298.0
BYD3_k127_4103534_0 ABC-type spermidine putrescine transport system, permease component II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000624 250.0
BYD3_k127_4105062_0 symporter activity K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007727 391.0
BYD3_k127_4105062_1 Cys/Met metabolism PLP-dependent enzyme K01739,K01760,K01761 - 2.5.1.48,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007719 323.0
BYD3_k127_4105062_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 316.0
BYD3_k127_4105287_0 nuclease activity - - - 0.0000000000000000000000000000000001062 137.0
BYD3_k127_4105287_1 toxin-antitoxin pair type II binding - - - 0.0000000000002911 72.0
BYD3_k127_4115251_0 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001146 265.0
BYD3_k127_4115251_1 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.0000000000000000000000000000000000000005245 162.0
BYD3_k127_4115251_2 PFAM Protein kinase domain K12132 - 2.7.11.1 0.000001984 53.0
BYD3_k127_411866_0 Domain of unknown function DUF87 K06915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 565.0
BYD3_k127_411866_1 Amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 499.0
BYD3_k127_411866_2 Amidohydrolase family K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000005329 206.0
BYD3_k127_411866_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000006572 202.0
BYD3_k127_411866_4 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000171 139.0
BYD3_k127_411866_5 histone H2A K63-linked ubiquitination - - - 0.0000000002786 70.0
BYD3_k127_4120461_0 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 497.0
BYD3_k127_4120461_1 DNA polymerase K02335 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 451.0
BYD3_k127_4120461_11 SNARE associated Golgi protein - - - 0.0001211 45.0
BYD3_k127_4120461_12 Anti-sigma-K factor rskA - - - 0.0001312 53.0
BYD3_k127_4120461_2 PFAM response regulator receiver K07665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 298.0
BYD3_k127_4120461_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009655 296.0
BYD3_k127_4120461_4 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 295.0
BYD3_k127_4120461_5 PFAM Cupin 2, conserved barrel - - - 0.000000000000000000000003961 107.0
BYD3_k127_4120461_6 Belongs to the peptidase S8 family K12287 - - 0.0000000000000000000003141 113.0
BYD3_k127_4120461_7 glycosyl transferase family 2 K20444 - - 0.0000000286 63.0
BYD3_k127_4120461_8 - - - - 0.0000001767 58.0
BYD3_k127_4120461_9 Rhodanese Homology Domain - - - 0.0000006494 56.0
BYD3_k127_4126449_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 4.498e-293 912.0
BYD3_k127_4126449_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 2.349e-209 655.0
BYD3_k127_4130655_0 PFAM UDP-galactopyranose mutase, C-terminal K01854 - 5.4.99.9 5.551e-205 642.0
BYD3_k127_4130655_1 6-phospho-beta-galactosidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006081 519.0
BYD3_k127_4130655_2 PFAM UDP-galactopyranose mutase K01854 - 5.4.99.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000084 515.0
BYD3_k127_4130655_3 Zinc dependent phospholipase C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 493.0
BYD3_k127_4130655_4 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 443.0
BYD3_k127_4130655_5 Phospholipase D Transphosphatidylase K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005658 410.0
BYD3_k127_4135942_0 Pyridine nucleotide-disulphide oxidoreductase K03885,K10716 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 615.0
BYD3_k127_4135942_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000374 166.0
BYD3_k127_4136036_0 argininosuccinate lyase K01755,K14681 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 349.0
BYD3_k127_4140382_0 Belongs to the ompA family - - - 0.000000000000000000000000000001046 134.0
BYD3_k127_4140382_1 DNA-templated transcription, initiation K03088 - - 0.00000001974 58.0
BYD3_k127_4141288_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 428.0
BYD3_k127_4141288_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 379.0
BYD3_k127_4141288_2 HlyD family secretion protein - - - 0.00000000000000000000000000000000000000000000001802 187.0
BYD3_k127_4141288_3 TonB dependent receptor - - - 0.000000000000000000000000000000000000000004268 163.0
BYD3_k127_4141288_4 HlyD family secretion protein K02005 - - 0.000000000000000000000000000000000000009001 160.0
BYD3_k127_414215_0 PQQ-like domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000001613 248.0
BYD3_k127_414215_1 FHA domain protein - - - 0.0000000000006378 79.0
BYD3_k127_414215_2 RDD family - - - 0.000000000001523 77.0
BYD3_k127_4152232_0 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 399.0
BYD3_k127_4152232_1 SCO1/SenC K07152 - - 0.00000000000000000000000000000000000000000000000002204 183.0
BYD3_k127_4152232_2 SCO1/SenC K07152,K08976 - - 0.0000000000000000006188 91.0
BYD3_k127_4152232_3 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.0000000000008099 79.0
BYD3_k127_4152232_4 Periplasmic binding protein - - - 0.000000007581 59.0
BYD3_k127_415568_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 1.674e-208 656.0
BYD3_k127_415568_1 PFAM adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004159 361.0
BYD3_k127_415568_2 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008943 356.0
BYD3_k127_415568_3 hydrolase activity, hydrolyzing O-glycosyl compounds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000479 278.0
BYD3_k127_415568_4 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000004798 244.0
BYD3_k127_415568_5 Fibronectin type 3 domain K01179,K06882 - 3.2.1.4 0.00000000001328 76.0
BYD3_k127_4156147_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 464.0
BYD3_k127_4156147_1 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000001217 256.0
BYD3_k127_4171929_0 Bacterial transcriptional activator domain K03556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009511 307.0
BYD3_k127_4171929_1 COG2909 ATP-dependent transcriptional regulator K03556 - - 0.000000000000000000000000000000000004429 159.0
BYD3_k127_4174399_0 Flavin containing amine oxidoreductase K01854 - 5.4.99.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 572.0
BYD3_k127_4174399_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001046 273.0
BYD3_k127_4174399_10 Gram-negative bacterial TonB protein C-terminal - - - 0.00001219 57.0
BYD3_k127_4174399_2 - K14340 - - 0.00000000000000000000000000000000000000000000000000000001695 213.0
BYD3_k127_4174399_3 Evidence 4 Homologs of previously reported genes of K21440 - - 0.00000000000000000000000000000000000001991 156.0
BYD3_k127_4174399_4 pilus organization K02674,K07004 - - 0.0000000000000000000000000002616 134.0
BYD3_k127_4174399_5 amine dehydrogenase activity K03496,K05592 - 3.6.4.13 0.0000000000000000000000000018 132.0
BYD3_k127_4174399_6 Peptidase family M23 - - - 0.0000000000000000000001446 115.0
BYD3_k127_4174399_7 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.000000000004981 74.0
BYD3_k127_4174399_8 Conserved repeat domain K01179 - 3.2.1.4 0.00000000001714 68.0
BYD3_k127_4174399_9 N-acetylmuramoyl-L-alanine amidase - - - 0.0000000003904 74.0
BYD3_k127_4174670_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 2.303e-288 904.0
BYD3_k127_4174670_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000002145 205.0
BYD3_k127_4206491_0 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 449.0
BYD3_k127_4206491_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 373.0
BYD3_k127_4206491_2 sugar phosphate isomerase involved in capsule formation K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000005593 210.0
BYD3_k127_4206491_3 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000009774 215.0
BYD3_k127_4206491_4 Belongs to the BI1 family K06890,K19416 - - 0.00000000000000000000000000000000001757 146.0
BYD3_k127_4206491_5 Elongation factor SelB, winged helix K03833 - - 0.00000000000000000000000000000000524 135.0
BYD3_k127_4206491_6 Tetratricopeptide repeat - - - 0.0000000001016 71.0
BYD3_k127_4206491_7 YceI-like domain - - - 0.000000007128 65.0
BYD3_k127_4206491_8 Outer membrane lipoprotein-sorting protein - - - 0.00001325 57.0
BYD3_k127_421295_0 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 379.0
BYD3_k127_421295_1 Acyl-transferase K00655 - 2.3.1.51 0.000000000000000000000000000000000003058 142.0
BYD3_k127_421295_2 DinB family - - - 0.0000000000000000000000000000005324 130.0
BYD3_k127_4216256_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000005637 229.0
BYD3_k127_4216256_1 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000004839 229.0
BYD3_k127_4216256_2 YtkA-like - - - 0.000000000004064 72.0
BYD3_k127_4219011_0 PFAM nitrogen-fixing NifU domain protein - - - 0.00000000000000000000000000001127 126.0
BYD3_k127_4219011_1 Transcriptional regulator - - - 0.000000000000000443 83.0
BYD3_k127_4229459_0 PFAM Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 556.0
BYD3_k127_4229459_1 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 300.0
BYD3_k127_4229459_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000006331 136.0
BYD3_k127_4229459_3 cyclic nucleotide binding K01420,K03321,K21563 - - 0.0000000000000000007959 95.0
BYD3_k127_4229459_4 glycosyl transferase - - - 0.00004848 55.0
BYD3_k127_424193_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 405.0
BYD3_k127_424193_1 Alpha/beta hydrolase family K22318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 352.0
BYD3_k127_424193_2 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000003725 216.0
BYD3_k127_424193_3 Isochorismatase family K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000000000001518 198.0
BYD3_k127_424193_4 CoA binding domain K06929 - - 0.00000000000000000000000000000000000000000297 159.0
BYD3_k127_424193_5 Amino-transferase class IV K00826 - 2.6.1.42 0.0000000000000000000000000000000000000005134 159.0
BYD3_k127_424193_6 PFAM thioesterase superfamily K07107 - - 0.000000000000000000000000000000000000001905 154.0
BYD3_k127_424193_7 Membrane - - - 0.000000000000000000000000005263 115.0
BYD3_k127_4242313_0 C-terminal, D2-small domain, of ClpB protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001051 228.0
BYD3_k127_4242313_1 peptidase activity, acting on L-amino acid peptides K14647,K20276,K21449 - - 0.000000000000000000000000000000000000000000000000000003953 214.0
BYD3_k127_4242313_2 PFAM 3D domain-containing protein - - - 0.00002569 47.0
BYD3_k127_424622_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 611.0
BYD3_k127_424622_1 protein methyltransferase activity K00568,K02687 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000006632 250.0
BYD3_k127_424622_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000001545 233.0
BYD3_k127_424622_3 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000175 107.0
BYD3_k127_424622_4 Protein of unknown function (DUF1565) - - - 0.0001082 55.0
BYD3_k127_4248267_0 Tricorn protease homolog - - - 0.0 1408.0
BYD3_k127_4248267_1 Bacterial PH domain K08981 - - 0.000000000000000000000000000000000000000000000000000002495 196.0
BYD3_k127_4248267_2 PFAM Phage derived protein Gp49-like (DUF891) - - - 0.00000000000000000000000000000000000000000000002681 171.0
BYD3_k127_4248267_3 Bacterial PH domain K08981 - - 0.000000000000000000000000000000000000000000008528 171.0
BYD3_k127_4248267_4 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000003636 122.0
BYD3_k127_4248267_5 Helix-turn-helix domain - - - 0.000000000000000000000000009627 112.0
BYD3_k127_4248267_6 Helix-turn-helix K21498 - - 0.00000000000000000000001347 104.0
BYD3_k127_4254020_0 Belongs to the peptidase S8 family K08651,K14645 - 3.4.21.66 0.0 1395.0
BYD3_k127_4254020_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000006755 121.0
BYD3_k127_4254020_2 PFAM Uncharacterised protein family UPF0157 - - - 0.0000000001269 64.0
BYD3_k127_4254128_0 Sortilin, neurotensin receptor 3, - - - 0.0 1438.0
BYD3_k127_4254128_1 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006987 347.0
BYD3_k127_4254128_10 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0007422 51.0
BYD3_k127_4254128_2 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004526 338.0
BYD3_k127_4254128_3 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000005809 213.0
BYD3_k127_4254128_4 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.0000000000000000000000000000000000000000000000000000009492 196.0
BYD3_k127_4254128_5 Metallo-peptidase family M12 - - - 0.000000000000000000000000000000002304 145.0
BYD3_k127_4254128_6 TonB dependent receptor K16087 - - 0.0000000000000000000000000000003924 143.0
BYD3_k127_4254128_7 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000001642 93.0
BYD3_k127_4254128_9 Putative zinc-finger - - - 0.0003758 51.0
BYD3_k127_4264227_0 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 333.0
BYD3_k127_4264227_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006383 254.0
BYD3_k127_4264227_3 GYD domain - - - 0.000000000000005557 78.0
BYD3_k127_4264227_4 Amidohydrolase family - - - 0.00000000005372 66.0
BYD3_k127_4266463_0 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000004352 119.0
BYD3_k127_4270792_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 593.0
BYD3_k127_4270792_1 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006852 368.0
BYD3_k127_4270792_10 Regulates arginine biosynthesis genes K03402 - - 0.000000000000004737 81.0
BYD3_k127_4270792_11 TIGRFAM TonB K03832 - - 0.00000000000001975 87.0
BYD3_k127_4270792_12 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.0000000000006545 75.0
BYD3_k127_4270792_2 Belongs to the ATCase OTCase family K00611,K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3,2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008898 336.0
BYD3_k127_4270792_3 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 313.0
BYD3_k127_4270792_4 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 322.0
BYD3_k127_4270792_5 Mo-molybdopterin cofactor biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000179 281.0
BYD3_k127_4270792_6 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001387 274.0
BYD3_k127_4270792_7 Belongs to the NAGSA dehydrogenase family. Type 1 subfamily K00145,K05829 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000007243 273.0
BYD3_k127_4270792_8 Subtilase family - - - 0.0000000000000000003168 92.0
BYD3_k127_4270792_9 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000001027 87.0
BYD3_k127_4273793_0 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 332.0
BYD3_k127_4273793_1 Domain of Unknown function (DUF542) K07322 - - 0.000000000000000000000009243 104.0
BYD3_k127_4277863_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169,K03737 - 1.2.7.1 0.0 1154.0
BYD3_k127_4277863_1 cyclic nucleotide-binding K01420,K10914 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 326.0
BYD3_k127_4277863_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 305.0
BYD3_k127_4277863_3 Sigma-70 region 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002205 300.0
BYD3_k127_4277863_4 Evidence 4 Homologs of previously reported genes of K21440 - - 0.0000000000000002596 85.0
BYD3_k127_4289360_0 NeuB family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000006473 213.0
BYD3_k127_4289360_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000001806 161.0
BYD3_k127_4289360_2 oligosaccharyl transferase activity K19003,K20327 - 2.4.1.336 0.00000000000000000000000000000000000002324 162.0
BYD3_k127_4291273_0 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 338.0
BYD3_k127_430647_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 1.743e-231 732.0
BYD3_k127_430647_1 hyperosmotic response K04065 - - 0.000001515 57.0
BYD3_k127_430647_2 D-alanyl-D-alanine carboxypeptidase K07260 - 3.4.17.14 0.0001213 53.0
BYD3_k127_4308361_0 Aminotransferase class-V K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 566.0
BYD3_k127_4308361_1 amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007157 503.0
BYD3_k127_4308361_2 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004751 340.0
BYD3_k127_4308361_3 Amidohydrolase K03392,K22213 - 4.1.1.45,4.1.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000002049 269.0
BYD3_k127_4308361_4 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000000000001191 209.0
BYD3_k127_4316285_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000002084 181.0
BYD3_k127_4322450_0 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000000000000000007509 216.0
BYD3_k127_4322450_1 PFAM peptidase S49 K04773 - - 0.000000000000000000000000000000000000000000000000003949 188.0
BYD3_k127_4322450_2 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000003081 190.0
BYD3_k127_4322450_3 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000005687 133.0
BYD3_k127_4327276_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 338.0
BYD3_k127_4339705_0 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000639 610.0
BYD3_k127_4347864_0 Heat shock 70 kDa protein K04043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 491.0
BYD3_k127_4347864_1 PFAM Organic solvent tolerance protein K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001285 284.0
BYD3_k127_4347864_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000001383 258.0
BYD3_k127_4347864_3 PFAM Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000004195 183.0
BYD3_k127_4347864_4 Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner K03687 - - 0.0000000000000000000000000000000005794 139.0
BYD3_k127_4347886_0 Carboxyl transferase domain - - - 3.973e-233 732.0
BYD3_k127_4347886_1 cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001017 282.0
BYD3_k127_4350426_0 transport - - - 1.934e-211 689.0
BYD3_k127_4350426_1 two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 296.0
BYD3_k127_4350426_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008495 278.0
BYD3_k127_4350426_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000002881 166.0
BYD3_k127_4350426_4 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000001939 138.0
BYD3_k127_4350426_5 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000002798 128.0
BYD3_k127_4350426_6 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000000000000000008908 119.0
BYD3_k127_4350426_7 Competence protein - - - 0.0000000000000000000000008658 114.0
BYD3_k127_4350426_8 Carboxypeptidase regulatory-like domain - - - 0.00000000001197 68.0
BYD3_k127_4352538_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 438.0
BYD3_k127_4352538_1 Transcriptional regulator K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008517 409.0
BYD3_k127_4352538_10 ketosteroid isomerase - - - 0.00000000000000000000000003967 113.0
BYD3_k127_4352538_11 protocatechuate 3,4-dioxygenase activity - - - 0.000000000000000000000002779 107.0
BYD3_k127_4352538_12 - - - - 0.00000001096 61.0
BYD3_k127_4352538_13 Belongs to the glutathione peroxidase family K00432 GO:0003674,GO:0003824,GO:0004601,GO:0004602,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009628,GO:0009636,GO:0009651,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016209,GO:0016491,GO:0016684,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0046686,GO:0048046,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071944,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.9 0.0000003273 61.0
BYD3_k127_4352538_2 cytochrome p450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 370.0
BYD3_k127_4352538_3 dTDP biosynthetic process K00560,K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.1.1.45,2.7.4.9,4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 326.0
BYD3_k127_4352538_4 dTDP biosynthetic process K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.9,4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006194 275.0
BYD3_k127_4352538_5 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases K00320 - 1.5.98.2 0.000000000000000000000000000000000000000000000000000000000000000000000000009134 263.0
BYD3_k127_4352538_6 Family of unknown function (DUF1028) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004815 254.0
BYD3_k127_4352538_7 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000000000000000000000271 191.0
BYD3_k127_4352538_8 TAP-like protein - - - 0.00000000000000000000000000000002791 136.0
BYD3_k127_4352538_9 ketosteroid isomerase - - - 0.00000000000000000000000000003117 122.0
BYD3_k127_435717_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 424.0
BYD3_k127_4366867_0 Protein of unknown function (DUF2723) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003096 273.0
BYD3_k127_4366867_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000001024 129.0
BYD3_k127_4366867_2 - - - - 0.00000000000000000000000000008245 126.0
BYD3_k127_438995_0 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.0 1127.0
BYD3_k127_438995_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.00000000000000000000000000001453 128.0
BYD3_k127_438995_2 PFAM Uncharacterised protein family (UPF0153) - - - 0.000752 48.0
BYD3_k127_439367_0 serine-type peptidase activity - - - 0.0 1244.0
BYD3_k127_439367_1 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0000000000000000000000000000000000008356 145.0
BYD3_k127_439367_2 - - - - 0.00000000003087 70.0
BYD3_k127_439367_3 Protein of unknown function (DUF1579) - - - 0.0000107 54.0
BYD3_k127_4398944_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 531.0
BYD3_k127_4401372_0 Ethanolamine ammonia lyase large subunit (EutB) K03735 - 4.3.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 431.0
BYD3_k127_4401372_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000039 159.0
BYD3_k127_4401372_2 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000005093 163.0
BYD3_k127_4401372_3 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000004887 123.0
BYD3_k127_4411281_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 595.0
BYD3_k127_4411281_1 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006356 370.0
BYD3_k127_4411281_2 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 323.0
BYD3_k127_4413770_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004735 319.0
BYD3_k127_4413770_1 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000003327 149.0
BYD3_k127_4418124_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 380.0
BYD3_k127_4418124_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758 366.0
BYD3_k127_4418124_2 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000000003057 160.0
BYD3_k127_4418124_3 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000005465 138.0
BYD3_k127_4418124_4 MacB-like periplasmic core domain - - - 0.0000000000000000000000005625 107.0
BYD3_k127_4420392_0 Domain of unknown function (DUF4118) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005837 342.0
BYD3_k127_4420392_1 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007108 323.0
BYD3_k127_4420392_2 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.0000000000000000000000000000000000000102 151.0
BYD3_k127_4420392_3 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0002699 44.0
BYD3_k127_4421459_0 aminopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 450.0
BYD3_k127_4421459_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000001329 250.0
BYD3_k127_4421459_2 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000001311 213.0
BYD3_k127_4421459_3 PBS lyase HEAT-like repeat - - - 0.00000000000000000000000005378 123.0
BYD3_k127_4421459_4 von Willebrand factor, type A - - - 0.00000000000000000000003829 111.0
BYD3_k127_4421459_5 diguanylate cyclase - - - 0.0000000000008865 76.0
BYD3_k127_4423344_0 HTH domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001068 280.0
BYD3_k127_4423344_1 Bacterial DNA-binding protein K03530 - - 0.000000000000000000000000003361 114.0
BYD3_k127_4423344_2 NUDIX domain K08310 - 3.6.1.67 0.0000000000000000000000006492 109.0
BYD3_k127_4424669_0 Male sterility protein K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 439.0
BYD3_k127_4424669_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 411.0
BYD3_k127_4424669_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 374.0
BYD3_k127_4424669_3 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 301.0
BYD3_k127_4424669_4 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 290.0
BYD3_k127_4424669_5 Predicted integral membrane protein (DUF2270) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002125 274.0
BYD3_k127_4424669_6 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000005443 239.0
BYD3_k127_4424669_7 - - - - 0.00000000000001353 81.0
BYD3_k127_4424669_8 CHRD domain - - - 0.000003825 58.0
BYD3_k127_4425858_0 Planctomycete cytochrome C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 382.0
BYD3_k127_4435682_0 Tricorn protease PDZ domain K08676 - - 0.0 1362.0
BYD3_k127_4435682_1 carboxylic acid catabolic process K02549 GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.2.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 383.0
BYD3_k127_4435682_2 Domain of unknown function (DUF4252) - - - 0.00000000003768 68.0
BYD3_k127_4435682_3 Helix-turn-helix domain, rpiR family - - - 0.00000002037 66.0
BYD3_k127_4442632_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 563.0
BYD3_k127_4442632_1 TIGRFAM Threonine synthase K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 426.0
BYD3_k127_4442632_2 Alcohol dehydrogenase GroES-like domain K13953,K18382 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 380.0
BYD3_k127_4442632_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409,K03070 GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 339.0
BYD3_k127_4442632_4 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000008015 231.0
BYD3_k127_4442632_5 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000005754 201.0
BYD3_k127_4442632_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000001905 171.0
BYD3_k127_4442632_7 Domain of unknown function (DUF4112) - - - 0.00000000000000000000000001519 117.0
BYD3_k127_4446339_0 PFAM peptidase K16922 - - 0.0000000000000000000000000000000000000000000000007952 199.0
BYD3_k127_4446339_1 PAS domain - - - 0.000000000000000005008 85.0
BYD3_k127_4451791_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 522.0
BYD3_k127_4451791_1 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000001021 174.0
BYD3_k127_4451791_2 Forkhead associated domain - - - 0.00000000007678 66.0
BYD3_k127_4453277_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000016 153.0
BYD3_k127_4453277_1 - - - - 0.0003037 48.0
BYD3_k127_4453450_0 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005103 565.0
BYD3_k127_4454654_0 PFAM AMP-dependent synthetase and ligase K00666 - - 3.455e-221 698.0
BYD3_k127_4454654_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 1.773e-215 679.0
BYD3_k127_4454654_2 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit K01768,K07315 - 3.1.3.3,4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008512 319.0
BYD3_k127_4454654_3 Belongs to the peptidase S8 family K17734 - - 0.0000000000000000000000000000001631 134.0
BYD3_k127_4454654_4 RNA-binding protein containing a PIN domain K06962 - - 0.000000000000000000000000000004183 124.0
BYD3_k127_4454654_5 nucleotide catabolic process - - - 0.00000000000000000000000009574 121.0
BYD3_k127_4454654_6 iron ion homeostasis - - - 0.000000000000002396 88.0
BYD3_k127_4454654_7 iron ion homeostasis - - - 0.00000000003474 76.0
BYD3_k127_446334_0 COGs COG1132 ABC-type multidrug transport system ATPase and permease components K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 613.0
BYD3_k127_446334_1 Amidohydrolase family K01465,K06015 - 3.5.1.81,3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 516.0
BYD3_k127_446334_2 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007745 501.0
BYD3_k127_446334_3 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431 - 3.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 432.0
BYD3_k127_446334_4 - - - - 0.000000000000000000000000000000000000000001829 166.0
BYD3_k127_446334_5 Cytochrome c554 and c-prime - - - 0.00000000000001055 85.0
BYD3_k127_4471840_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.145e-254 794.0
BYD3_k127_4471840_1 serine-type peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 539.0
BYD3_k127_4471840_2 Phosphate acetyl/butaryl transferase K00625 GO:0006082,GO:0006083,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016053,GO:0016999,GO:0017000,GO:0017144,GO:0019413,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 357.0
BYD3_k127_4471840_3 Eco57I restriction-modification methylase K07317 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 299.0
BYD3_k127_4471840_4 O-methyltransferase K00588 - 2.1.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007696 285.0
BYD3_k127_4471840_5 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000005194 202.0
BYD3_k127_4471840_6 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000000008391 153.0
BYD3_k127_4472610_0 serine threonine protein kinase K12132 - 2.7.11.1 1.87e-216 704.0
BYD3_k127_4472610_1 Protein of unknown function (DUF969) - - - 0.00000000000000000000000000000000000000000000000000001048 198.0
BYD3_k127_4472610_2 Protein of unknown function (DUF979) - - - 0.0000000000000000000000000009526 118.0
BYD3_k127_4480436_0 Ornithine cyclodeaminase/mu-crystallin family K21721 - 1.5.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 337.0
BYD3_k127_4480436_1 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004937 290.0
BYD3_k127_4480436_2 Belongs to the peptidase S51 family K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.0000000000000000000000000000000000000000000000000000000000000002357 224.0
BYD3_k127_4491576_0 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008586 394.0
BYD3_k127_4491576_1 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000002553 137.0
BYD3_k127_4491576_2 - - - - 0.00001359 48.0
BYD3_k127_4494412_0 COG0644 Dehydrogenases (flavoproteins) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 424.0
BYD3_k127_4494412_1 COG0635 Coproporphyrinogen III oxidase and related Fe-S - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 391.0
BYD3_k127_4506221_0 Belongs to the aldehyde dehydrogenase family K00140,K22187 - 1.2.1.18,1.2.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 435.0
BYD3_k127_4508293_0 Ketoacyl-synthetase C-terminal extension - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006919 408.0
BYD3_k127_4509427_0 Serine threonine protein kinase K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000002345 230.0
BYD3_k127_4514965_0 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000308 456.0
BYD3_k127_4514965_1 agmatine deiminase activity K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008187 433.0
BYD3_k127_4514965_2 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 342.0
BYD3_k127_4514965_3 Ion transport protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 333.0
BYD3_k127_4514965_4 PFAM intradiol ring-cleavage dioxygenase K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 313.0
BYD3_k127_4514965_5 Trehalose utilisation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008338 302.0
BYD3_k127_4514965_6 Dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000005649 223.0
BYD3_k127_4514965_7 Domain of unknown function (4846) - - - 0.0000000000000000000000000000000000000000000000000000001571 206.0
BYD3_k127_4514965_8 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000009682 184.0
BYD3_k127_4514965_9 Ftsk_gamma K03466 - - 0.00000008807 61.0
BYD3_k127_451628_0 Sodium:solute symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006491 325.0
BYD3_k127_451628_1 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007859 301.0
BYD3_k127_4521549_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.17e-309 971.0
BYD3_k127_4521549_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009102 510.0
BYD3_k127_4521549_2 Outer membrane lipoprotein - - - 0.00007723 49.0
BYD3_k127_4524534_0 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000008932 175.0
BYD3_k127_4539665_0 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 315.0
BYD3_k127_4544469_0 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000000000000001557 85.0
BYD3_k127_4545650_0 Transcriptional regulator - - - 0.000000000000000000000000792 110.0
BYD3_k127_4545650_1 - - - - 0.00000000000005859 76.0
BYD3_k127_4545758_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 381.0
BYD3_k127_45470_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000106 175.0
BYD3_k127_4547937_0 Radical SAM superfamily K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 497.0
BYD3_k127_4547937_1 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 400.0
BYD3_k127_4547937_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005136 386.0
BYD3_k127_4547937_3 PFAM D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000000000000000002988 103.0
BYD3_k127_4556234_0 PBS lyase HEAT-like repeat - - - 0.000000000000000000000000000000006486 138.0
BYD3_k127_4556234_1 TOBE domain K02017 - 3.6.3.29 0.0000000000007907 70.0
BYD3_k127_4556234_2 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000002877 68.0
BYD3_k127_4562992_0 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 389.0
BYD3_k127_4562992_1 efflux transmembrane transporter activity - - - 0.000000001053 61.0
BYD3_k127_4563413_0 Cyclomaltodextrinase, N-terminal K21575 - 3.2.1.135 3.195e-230 728.0
BYD3_k127_4563413_1 MFS/sugar transport protein - - - 0.0000000000001187 71.0
BYD3_k127_4563713_0 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 385.0
BYD3_k127_4563713_1 PFAM Glycosyl transferase family 2 K10012 - 2.4.2.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004798 296.0
BYD3_k127_4563713_2 Belongs to the glycosyltransferase 26 family K05946,K13660 - 2.4.1.187 0.0000000000000000000000000000000000000000000000000000000000001004 231.0
BYD3_k127_4574118_0 High-affinity nickel-transport protein K08970 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 342.0
BYD3_k127_4574118_1 PFAM Nickel cobalt transporter, high-affinity - - - 0.00000000000000000000000000000000000000000000001586 179.0
BYD3_k127_4576591_0 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 314.0
BYD3_k127_4576591_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006299 308.0
BYD3_k127_4586889_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000002967 177.0
BYD3_k127_4586889_1 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000008408 182.0
BYD3_k127_4587358_0 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004226 613.0
BYD3_k127_4587358_1 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 539.0
BYD3_k127_4587358_2 LytB protein K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 416.0
BYD3_k127_4587358_3 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 332.0
BYD3_k127_4587358_4 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 318.0
BYD3_k127_4587358_5 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000001349 215.0
BYD3_k127_4587358_6 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000002078 164.0
BYD3_k127_4587358_7 Bacterial regulatory proteins, tetR family K09017 - - 0.00000000000000000000000000000000000000009182 158.0
BYD3_k127_4587358_8 - - - - 0.000000000000000000000000000000000000007628 162.0
BYD3_k127_4590034_0 NurA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 329.0
BYD3_k127_4590034_1 Aromatic amino acid lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000004116 182.0
BYD3_k127_4590034_2 Purine catabolism regulatory protein-like family K09684 - - 0.0000000000000000000000000000000000000000000000006219 190.0
BYD3_k127_4590034_3 - - - - 0.00000000000000000000000000000000000007287 149.0
BYD3_k127_4590034_4 EamA-like transporter family - - - 0.00000000000000000000000000005755 128.0
BYD3_k127_4590034_5 TIGRFAM ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.000000000000000000001091 102.0
BYD3_k127_4590034_6 transcriptional regulator K06211 GO:0000166,GO:0000287,GO:0000309,GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005524,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009268,GO:0009435,GO:0009628,GO:0009987,GO:0010035,GO:0010038,GO:0010446,GO:0016043,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0022607,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043565,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0046872,GO:0050896,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051716,GO:0055086,GO:0065003,GO:0070566,GO:0070887,GO:0071241,GO:0071248,GO:0071704,GO:0071840,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990837 2.7.1.22,2.7.7.1 0.0005125 48.0
BYD3_k127_4591717_0 Outer membrane protein (OmpH-like) K06142 - - 0.000000000265 70.0
BYD3_k127_4591717_1 Outer membrane protein (OmpH-like) K06142 - - 0.000000001245 67.0
BYD3_k127_4591717_2 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.00000004154 61.0
BYD3_k127_4596958_0 Tricorn protease PDZ domain K08676 - - 1.174e-255 825.0
BYD3_k127_4596958_1 Putative ATP-dependent DNA helicase recG C-terminal - - - 0.000000000006093 75.0
BYD3_k127_4596958_2 oxidoreductase activity - - - 0.0003504 44.0
BYD3_k127_4609362_0 response regulator K10943 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 392.0
BYD3_k127_4609362_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000002179 177.0
BYD3_k127_462800_0 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 1.956e-239 749.0
BYD3_k127_462800_1 glutamine synthetase K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000521 574.0
BYD3_k127_462800_2 PFAM Type II secretion system F domain K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006883 426.0
BYD3_k127_463594_0 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000131 167.0
BYD3_k127_4648603_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11779,K11784 - 1.21.98.1,2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009541 301.0
BYD3_k127_4648603_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008893 274.0
BYD3_k127_4648603_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000001616 190.0
BYD3_k127_4649999_0 Phage tail sheath C-terminal domain K06907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006141 545.0
BYD3_k127_4649999_1 phage tail region protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001885 235.0
BYD3_k127_4649999_2 PFAM T4-like virus tail tube protein gp19 - - - 0.000000000000000000000000000000000000000000000000001034 186.0
BYD3_k127_4649999_3 - - - - 0.000000000000000000000000000000000000000000000001172 177.0
BYD3_k127_4649999_4 - - - - 0.00000000000000000000001303 102.0
BYD3_k127_4665783_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003347 414.0
BYD3_k127_4665783_1 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000000000000000000000000000000007351 169.0
BYD3_k127_4665783_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000001476 64.0
BYD3_k127_4665783_4 Anaphase-promoting complex, cyclosome, subunit 3 - - - 0.00004194 54.0
BYD3_k127_4668008_0 GTP-binding protein TypA K06207 - - 2.997e-267 833.0
BYD3_k127_4668008_1 Belongs to the amidase family K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 298.0
BYD3_k127_4668869_0 Thioredoxin-like - - - 0.0000000000000000000000000000000000000003279 163.0
BYD3_k127_4671901_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 603.0
BYD3_k127_4671901_1 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000007954 254.0
BYD3_k127_4679722_0 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000000000000000000000000000000000000000173 220.0
BYD3_k127_4679722_1 Protein of unknown function (DUF1800) - - - 0.0000000000000009384 81.0
BYD3_k127_4690515_0 Dehydrogenase K00114,K17760,K22473 - 1.1.2.8,1.1.5.5,1.1.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000009176 269.0
BYD3_k127_4690515_1 heat shock protein binding K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004803 264.0
BYD3_k127_4701608_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000001131 164.0
BYD3_k127_4701608_1 Putative zinc-finger - - - 0.00002396 52.0
BYD3_k127_4708851_0 HEAT repeats - - - 0.0007019 51.0
BYD3_k127_4710105_0 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000001616 211.0
BYD3_k127_4710105_1 PFAM glycine cleavage H-protein - - - 0.00000000000000000005728 96.0
BYD3_k127_4710105_2 fatty acid desaturase - - - 0.0000000000000000001375 101.0
BYD3_k127_4710105_3 HNH nucleases - - - 0.0000000000000002369 81.0
BYD3_k127_4710105_5 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.0000000002941 66.0
BYD3_k127_4711934_0 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K17763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004687 251.0
BYD3_k127_4711934_1 Serine/threonine phosphatases, family 2C, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000006163 229.0
BYD3_k127_4711934_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000001007 200.0
BYD3_k127_4711934_3 Histidine kinase-like ATPase domain K17752 - 2.7.11.1 0.000000000000000000000000000000000000001092 151.0
BYD3_k127_4711934_4 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K17762 - - 0.00000000000000000000000000000000007425 138.0
BYD3_k127_4711934_5 Universal stress protein family - - - 0.000000003016 68.0
BYD3_k127_4711934_6 Belongs to the UPF0337 (CsbD) family - - - 0.0002224 46.0
BYD3_k127_4714196_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 525.0
BYD3_k127_4714196_1 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008907 312.0
BYD3_k127_4714196_2 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.000000000000000000000000000000000000001155 161.0
BYD3_k127_4714196_3 von Willebrand factor, type A K07114 - - 0.00000000000000000000003578 111.0
BYD3_k127_4714196_4 Trm112p-like protein K09791 - - 0.000000000000000000013 92.0
BYD3_k127_4717490_0 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000000000000000000000000000000000000000000000000000000001059 246.0
BYD3_k127_4717490_1 pathogenesis K01179,K07004 - 3.2.1.4 0.0000000000000000000000000000000000000001094 176.0
BYD3_k127_4717490_2 amino acid activation for nonribosomal peptide biosynthetic process K03641,K20276 - - 0.0000000000000000000000000000000000009482 163.0
BYD3_k127_4717490_3 Caspase domain - - - 0.00000000000000000000000000002212 134.0
BYD3_k127_4717490_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000533 87.0
BYD3_k127_4717490_5 oxidoreductase activity K02396 - - 0.000000005715 70.0
BYD3_k127_4717490_6 Protein conserved in bacteria K20276 - - 0.00003043 56.0
BYD3_k127_4725940_0 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000069 224.0
BYD3_k127_4725940_1 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.000000000000000000000000000000000000000000005155 169.0
BYD3_k127_4725940_2 Protein of unknown function (DUF3341) - - - 0.0000000000000000000000000000000000003293 141.0
BYD3_k127_4730332_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003591 274.0
BYD3_k127_4730332_1 Protein of unknown function (DUF1800) - - - 0.00000000000000000001952 98.0
BYD3_k127_4733441_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 3.248e-242 761.0
BYD3_k127_4733441_1 PFAM Peptidase M16 inactive domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 319.0
BYD3_k127_4733441_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00001681 48.0
BYD3_k127_4735914_0 Vault protein inter-alpha-trypsin domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 294.0
BYD3_k127_4735914_1 - K19693 - - 0.000000000000000000000000000000000000000000000000000000001404 224.0
BYD3_k127_4735914_2 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000004053 159.0
BYD3_k127_4740816_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 329.0
BYD3_k127_4740816_1 ferrous iron binding K06990,K09141,K15755 - - 0.0000000000004666 72.0
BYD3_k127_4744135_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 518.0
BYD3_k127_4744135_1 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006212 505.0
BYD3_k127_4744135_2 D12 class N6 adenine-specific DNA methyltransferase K07318 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 332.0
BYD3_k127_4744135_3 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000801 266.0
BYD3_k127_4744135_4 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000005156 210.0
BYD3_k127_474524_0 Glycosyl hydrolase family 9 - - - 0.0000000000000000000000000000000000000000189 166.0
BYD3_k127_474919_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 296.0
BYD3_k127_474919_1 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006808 243.0
BYD3_k127_474919_2 - - - - 0.00000000000000000000000000000000000000000000848 170.0
BYD3_k127_4759553_0 photosystem II stabilization - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001327 262.0
BYD3_k127_4759553_1 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000002647 207.0
BYD3_k127_4759553_2 Hemerythrin hhe cation binding - - - 0.0000000000000000000000000000000000002158 146.0
BYD3_k127_4760959_0 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 332.0
BYD3_k127_4760959_1 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001491 253.0
BYD3_k127_4760959_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000008475 210.0
BYD3_k127_4761187_0 Phosphoglucose isomerase K01810,K13810 - 2.2.1.2,5.3.1.9 0.0 1041.0
BYD3_k127_4761187_1 Belongs to the transketolase family K00615 - 2.2.1.1 6.896e-317 984.0
BYD3_k127_4761187_2 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000001934 243.0
BYD3_k127_4761187_3 Sulfatase-modifying factor enzyme 1 K18912 - 1.14.99.50 0.0000000000000000000000000000000000129 156.0
BYD3_k127_4761187_4 Hydrolase - - - 0.0000000000004009 74.0
BYD3_k127_4761187_5 PFAM Forkhead-associated protein - - - 0.00000358 57.0
BYD3_k127_4785639_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 589.0
BYD3_k127_4786280_0 Peptidase, M16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000196 278.0
BYD3_k127_4789096_0 Belongs to the glycosyl hydrolase 57 family K06044 - 5.4.99.15 6.22e-321 1001.0
BYD3_k127_4789096_1 Maltooligosyl trehalose synthase K06044 - 5.4.99.15 7.14e-321 1007.0
BYD3_k127_4790712_0 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 515.0
BYD3_k127_4794228_0 ABC transporter permease K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000003176 246.0
BYD3_k127_4820800_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 361.0
BYD3_k127_4820800_1 Dihydroorotate dehydrogenase K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 354.0
BYD3_k127_4820800_2 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000366 245.0
BYD3_k127_4820800_3 Oxidoreductase NAD-binding domain K02823 - - 0.0000000000000000000000000000000000000000000000149 181.0
BYD3_k127_4820800_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000599 181.0
BYD3_k127_4820800_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000001708 149.0
BYD3_k127_4820800_6 GAF domain-containing protein K08968 - 1.8.4.14 0.00000000000000000000000000000000001198 140.0
BYD3_k127_4820800_7 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine - - - 0.000000000000000000000000000000001692 138.0
BYD3_k127_4820800_8 LysM domain - - - 0.0000000000000000000000008071 110.0
BYD3_k127_4820800_9 Polymer-forming cytoskeletal - - - 0.000000000000000004195 91.0
BYD3_k127_4823493_0 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000005238 138.0
BYD3_k127_4826444_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 501.0
BYD3_k127_4826444_1 COGs COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM CutM homologs K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 298.0
BYD3_k127_4829889_0 beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000001069 205.0
BYD3_k127_4829889_1 - - - - 0.0000000000000000000000004531 110.0
BYD3_k127_4833917_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009902 348.0
BYD3_k127_4833917_1 PFAM Endonuclease Exonuclease phosphatase K07004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001482 263.0
BYD3_k127_4833917_2 YceI-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000002852 233.0
BYD3_k127_4833917_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000000001659 198.0
BYD3_k127_4833917_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000002316 180.0
BYD3_k127_4833917_5 general secretion pathway protein G K02456 - - 0.000009347 56.0
BYD3_k127_4838062_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003543 512.0
BYD3_k127_4838062_1 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 327.0
BYD3_k127_4838062_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000002062 89.0
BYD3_k127_4838062_11 Ribosomal protein L30 K02907 - - 0.00000000000000002416 85.0
BYD3_k127_4838062_12 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000005589 76.0
BYD3_k127_4838062_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000001043 225.0
BYD3_k127_4838062_3 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000006917 220.0
BYD3_k127_4838062_4 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000007955 222.0
BYD3_k127_4838062_5 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000001773 190.0
BYD3_k127_4838062_6 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000000002629 181.0
BYD3_k127_4838062_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000002211 177.0
BYD3_k127_4838062_8 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000214 170.0
BYD3_k127_4838062_9 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000000003389 151.0
BYD3_k127_4841625_0 Belongs to the peptidase S1C family - - - 0.00000000000003243 85.0
BYD3_k127_484247_0 desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 363.0
BYD3_k127_484247_1 PFAM ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000001519 239.0
BYD3_k127_4845035_0 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 330.0
BYD3_k127_4845035_1 N-acetylglucosaminylinositol deacetylase activity K01463 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004444 254.0
BYD3_k127_4845035_2 SpoU rRNA Methylase family K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000000000000007272 193.0
BYD3_k127_4845035_3 C-terminal domain of histone - - - 0.0000000000000000000000000000000000000000004262 164.0
BYD3_k127_4845035_4 NUDIX domain K03574 - 3.6.1.55 0.000000000000000000000000000000000000000002744 160.0
BYD3_k127_4845035_5 Rossmann-like domain - - - 0.00000000000000000000000000000000000002922 154.0
BYD3_k127_4845035_6 - - - - 0.00000000000000000000000009263 108.0
BYD3_k127_4845035_7 PFAM Pentapeptide repeats (8 copies) - - - 0.00000000001058 76.0
BYD3_k127_4853249_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1046.0
BYD3_k127_4853249_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 1.48e-227 711.0
BYD3_k127_4853249_2 oxidoreductase activity K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006773 314.0
BYD3_k127_4853249_3 extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001497 288.0
BYD3_k127_4853249_4 cytochrome c nitrite reductase K15876 - - 0.0000000000000000000000000000000000000000000000000000000000000007221 222.0
BYD3_k127_4853249_5 - - - - 0.00000000000000000000000000000000000000000000000000002568 192.0
BYD3_k127_4853249_6 Phosphoribosyl transferase domain K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000006989 188.0
BYD3_k127_4853249_7 polysaccharide lyase family 8 K01727 GO:0005575,GO:0005576 4.2.2.1 0.000003012 59.0
BYD3_k127_4856142_0 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000002333 81.0
BYD3_k127_4856142_1 Lysylphosphatidylglycerol synthase TM region - - - 0.00009573 49.0
BYD3_k127_4861619_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000001441 197.0
BYD3_k127_4861619_1 phosphatidylethanolamine metabolic process K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000004001 183.0
BYD3_k127_4861619_2 HD domain - - - 0.00000000000000000000000000000427 138.0
BYD3_k127_4861619_3 Histidine kinase - - - 0.00000000000000006648 85.0
BYD3_k127_4862533_0 protein containing a ferredoxin-like domain K18929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002789 274.0
BYD3_k127_4862533_1 LUD domain K00782 - - 0.000000000000000000000000001842 122.0
BYD3_k127_4862533_2 COG5285 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.0000000000009902 70.0
BYD3_k127_4865665_0 sequence-specific DNA binding K07110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000067 244.0
BYD3_k127_4870970_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001233 264.0
BYD3_k127_4870970_1 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000001079 187.0
BYD3_k127_4870970_2 - - - - 0.0000000000000001947 94.0
BYD3_k127_4886773_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 607.0
BYD3_k127_4886773_1 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008782 296.0
BYD3_k127_4886773_2 pfkB family carbohydrate kinase K18478 - 2.7.1.184 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002159 286.0
BYD3_k127_4886773_3 Belongs to the ompA family - - - 0.0000000000000000000000004412 113.0
BYD3_k127_4886773_4 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0006046 45.0
BYD3_k127_488812_0 Curli production assembly/transport component CsgG - - - 0.000000001462 64.0
BYD3_k127_4893966_0 4fe-4S ferredoxin, iron-sulfur binding domain protein K00384,K21567 - 1.18.1.2,1.19.1.1,1.8.1.9 0.0000000000000000000000000000000000000000001455 178.0
BYD3_k127_4897395_0 Homoserine dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 296.0
BYD3_k127_4897395_1 Xylose isomerase-like TIM barrel K06606 - 5.3.99.11 0.000000000000000000000000000000000000000000000000000000009599 209.0
BYD3_k127_4898156_0 thiolester hydrolase activity K07000 - - 0.00000000000000000000000000000000000005945 151.0
BYD3_k127_4899242_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000003274 176.0
BYD3_k127_4899242_1 Putative zinc-finger - - - 0.0001062 51.0
BYD3_k127_4904859_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 0.0000000000000000000000000000000000000000000000000000007561 197.0
BYD3_k127_4916134_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 424.0
BYD3_k127_4916134_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000002844 263.0
BYD3_k127_4917490_0 DNA-K related protein - - - 1.469e-242 780.0
BYD3_k127_4917490_1 MreB/Mbl protein - - - 5.469e-230 731.0
BYD3_k127_4917490_10 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 0.000000000001342 78.0
BYD3_k127_4917490_2 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006568 381.0
BYD3_k127_4917490_3 nodulation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004496 267.0
BYD3_k127_4917490_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002946 262.0
BYD3_k127_4917490_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001615 235.0
BYD3_k127_4917490_6 Diacylglycerol kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000005196 232.0
BYD3_k127_4917490_7 Domain of unknown function (DUF2760) - - - 0.000000000000000000000000000000000000005067 154.0
BYD3_k127_4917490_8 MacB-like periplasmic core domain - - - 0.000000000000000000000000002706 119.0
BYD3_k127_4917490_9 Universal stress protein family - - - 0.000000000000001017 88.0
BYD3_k127_4927042_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000002542 57.0
BYD3_k127_4935713_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 453.0
BYD3_k127_4938926_0 Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006763 314.0
BYD3_k127_4938926_1 Aerotolerance regulator N-terminal - - - 0.00005682 53.0
BYD3_k127_4948918_0 efflux transmembrane transporter activity K02004 - - 8.892e-211 682.0
BYD3_k127_4948918_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 546.0
BYD3_k127_4948918_2 PFAM CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006484 396.0
BYD3_k127_4948918_3 imidazolonepropionase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001374 267.0
BYD3_k127_4950977_0 Belongs to the LarC family K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 356.0
BYD3_k127_4950977_1 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000001297 234.0
BYD3_k127_4950977_2 GTP cyclohydrolase I K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000006733 167.0
BYD3_k127_4956811_0 bacteriocin biosynthesis docking scaffold, SagD family K09136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 492.0
BYD3_k127_4960097_0 Cysteine-rich domain K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003989 271.0
BYD3_k127_4960097_1 LUD domain K18929 - - 0.000000000000000000000000000000000000000000000000003489 188.0
BYD3_k127_4960097_2 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.000000000000000001863 88.0
BYD3_k127_4960777_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007068 539.0
BYD3_k127_4960777_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 503.0
BYD3_k127_4960777_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 403.0
BYD3_k127_4960777_3 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000002618 226.0
BYD3_k127_4960777_4 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000001481 179.0
BYD3_k127_4960777_5 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000000005447 142.0
BYD3_k127_4960777_6 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000005333 148.0
BYD3_k127_4960777_7 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000001101 76.0
BYD3_k127_4970677_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05996,K07752 - 3.4.17.18,3.4.17.22 0.000000000000000000000000000000000000000000000000006098 207.0
BYD3_k127_4970677_1 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000001466 112.0
BYD3_k127_4970677_2 Tetratricopeptide repeat - - - 0.000000000000009629 87.0
BYD3_k127_4970677_3 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000585 72.0
BYD3_k127_4970677_4 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000003789 74.0
BYD3_k127_4970677_5 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000001894 69.0
BYD3_k127_4974188_0 Periplasmic or secreted lipoprotein - - - 0.0000000001571 72.0
BYD3_k127_4974188_1 - - - - 0.0003127 52.0
BYD3_k127_4982144_0 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001142 265.0
BYD3_k127_4982144_1 PFAM transferase hexapeptide repeat containing protein K00966 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000001574 237.0
BYD3_k127_4983181_0 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000003348 141.0
BYD3_k127_4983181_1 Domain of unknown function (DUF4652) - - - 0.0001286 52.0
BYD3_k127_4987520_0 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004053 573.0
BYD3_k127_4987520_1 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.0000000000000000000000000000904 119.0
BYD3_k127_4987520_2 succinyl-diaminopimelate desuccinylase activity - - - 0.0000000000000000000000000005952 113.0
BYD3_k127_4987520_3 Bacterial protein of unknown function (DUF937) - - - 0.000000000000001781 79.0
BYD3_k127_4988609_0 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 400.0
BYD3_k127_4988609_1 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639,K00652 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0016874,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 331.0
BYD3_k127_4988609_2 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001079 248.0
BYD3_k127_4988609_3 ankyrin 3, node of Ranvier (ankyrin G) - - - 0.00000000000000000000000000000000000008827 153.0
BYD3_k127_498900_0 Domain of unknown function (DUF5117) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 559.0
BYD3_k127_498900_1 - - - - 0.0000000003052 68.0
BYD3_k127_4989280_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 324.0
BYD3_k127_4989280_1 Thiamine pyrophosphate enzyme, central domain K01576 - 4.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000002832 281.0
BYD3_k127_4989280_2 Cytochrome c - - - 0.00000002263 65.0
BYD3_k127_4989280_3 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.00000009464 64.0
BYD3_k127_4993040_0 benzoyl-CoA reductase K04113 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 302.0
BYD3_k127_4993040_1 BadF/BadG/BcrA/BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002225 276.0
BYD3_k127_4993040_2 PFAM BadF BadG BcrA BcrD ATPase family - - - 0.000000000000000000000000000000000000000000000000002358 192.0
BYD3_k127_4993040_3 2-hydroxyglutaryl-CoA dehydratase, D-component K04112,K20904 - 1.3.7.8,4.2.1.167 0.000000000003701 69.0
BYD3_k127_5006003_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858 367.0
BYD3_k127_5006003_1 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000003207 190.0
BYD3_k127_5011599_0 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000005733 278.0
BYD3_k127_5012074_0 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000000000000000000000000001503 143.0
BYD3_k127_5015914_0 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000001088 199.0
BYD3_k127_5015914_1 Transposase DDE domain - - - 0.000000002985 57.0
BYD3_k127_5015914_2 Transposase DDE domain - - - 0.000000005973 57.0
BYD3_k127_5018467_0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007657 276.0
BYD3_k127_5018467_1 Selenoprotein B, glycine betaine sarcosine D-proline reductase family K10672 - 1.21.4.2 0.000000000000000000000000000000000000000000000000000000000000000007229 231.0
BYD3_k127_5018467_2 Glycine reductase complex selenoprotein A - - - 0.0000000000000000000000000000009147 124.0
BYD3_k127_5018467_3 Glycine reductase complex selenoprotein A K10670 - 1.21.4.2,1.21.4.3,1.21.4.4 0.000000004152 58.0
BYD3_k127_5024365_0 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003096 243.0
BYD3_k127_5024365_1 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000004802 230.0
BYD3_k127_5024365_2 Belongs to the dCTP deaminase family K01494 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006244,GO:0006253,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008829,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009166,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0015949,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046065,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.5.4.13 0.000000000000000000000000000000000000000000000002239 179.0
BYD3_k127_5024365_3 Belongs to the P-Pant transferase superfamily K06133 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008897,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0019752,GO:0019878,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000002247 113.0
BYD3_k127_5038384_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 419.0
BYD3_k127_5041869_0 Metalloenzyme superfamily K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 479.0
BYD3_k127_5041869_1 Serine aminopeptidase, S33 K07019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 316.0
BYD3_k127_5041869_2 Inositol monophosphatase K01082,K01092 GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 294.0
BYD3_k127_5041869_3 PFAM DNA methylase, adenine-specific - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001392 275.0
BYD3_k127_5041869_4 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000129 223.0
BYD3_k127_5041869_5 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000003757 131.0
BYD3_k127_5041869_6 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.000000000000000000000005519 109.0
BYD3_k127_5041869_7 - - - - 0.000004197 58.0
BYD3_k127_5055855_0 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004935 374.0
BYD3_k127_5055855_1 RNase_H superfamily K07502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 319.0
BYD3_k127_5055855_2 palmitoyl-(protein) hydrolase activity K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005381 281.0
BYD3_k127_5055855_3 PhoQ Sensor - - - 0.00000000000000000000000000000000000000006747 168.0
BYD3_k127_5055855_4 Amidohydrolase family K06015 - 3.5.1.81 0.000000000000000006816 88.0
BYD3_k127_5068577_0 Imidazolonepropionase and related - - - 2.131e-205 649.0
BYD3_k127_5072617_0 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007137 279.0
BYD3_k127_5072617_1 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000003308 256.0
BYD3_k127_5072617_2 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000000002061 222.0
BYD3_k127_5072617_3 Protein of unknown function (DUF454) K09790 - - 0.000000000000000000000000000000000002938 141.0
BYD3_k127_5072617_4 cell redox homeostasis K02199 - - 0.00000000000000000000000001288 116.0
BYD3_k127_5072617_5 cyclic nucleotide binding K01420,K03321,K21563 - - 0.0000000000000006872 86.0
BYD3_k127_5072617_6 Type IV pilus biogenesis stability protein PilW - - - 0.0000005471 52.0
BYD3_k127_5072887_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001182 280.0
BYD3_k127_5072887_1 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000000004535 220.0
BYD3_k127_5072887_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.000001464 51.0
BYD3_k127_5076331_0 Glycosyltransferase family 28 N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007755 468.0
BYD3_k127_5076331_1 OmpA family K02557,K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009639 464.0
BYD3_k127_5076331_2 transcription factor binding K02584,K12146,K12266,K15836,K21009 GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001150,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0042802,GO:0043170,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 310.0
BYD3_k127_5076331_3 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000007157 169.0
BYD3_k127_5076331_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000003717 114.0
BYD3_k127_5076331_5 Domain of unknown function (DUF4136) - - - 0.000000000000000000000001344 111.0
BYD3_k127_5076331_6 TIGRFAM Small GTP-binding protein K06883 - - 0.000000000000003561 76.0
BYD3_k127_5076331_7 Domain of unknown function (DUF4136) - - - 0.0000000000001075 79.0
BYD3_k127_5077109_0 TIGRFAM molybdenum cofactor synthesis K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004293 291.0
BYD3_k127_5077109_1 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000006677 183.0
BYD3_k127_5077109_2 PFAM MCP methyltransferase, CheR-type K00575 - 2.1.1.80 0.000000000000000000000000000000001119 138.0
BYD3_k127_5077109_3 cell redox homeostasis K00384 - 1.8.1.9 0.00000000000003626 76.0
BYD3_k127_5077109_4 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00002444 57.0
BYD3_k127_5079449_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 570.0
BYD3_k127_5079449_1 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000000449 117.0
BYD3_k127_5079449_2 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000005158 108.0
BYD3_k127_5085035_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 506.0
BYD3_k127_5085035_1 von Willebrand factor, type A - - - 0.000000000000000000000000000000002062 142.0
BYD3_k127_5100_0 PFAM Bacterial protein of K07093 - - 5.701e-314 976.0
BYD3_k127_5100_1 COG3540 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 415.0
BYD3_k127_5100_10 - - - - 0.0000000003583 70.0
BYD3_k127_5100_2 PFAM Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008765 355.0
BYD3_k127_5100_3 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000258 288.0
BYD3_k127_5100_4 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000002079 165.0
BYD3_k127_5100_5 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000009012 155.0
BYD3_k127_5100_6 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.0000000000000000000000000009255 120.0
BYD3_k127_5100_7 Transcriptional regulator - - - 0.0000000000000002613 84.0
BYD3_k127_5100_8 COG3540 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.00000000000007158 74.0
BYD3_k127_5100_9 cAMP biosynthetic process - - - 0.000000000001843 68.0
BYD3_k127_5105872_0 cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 341.0
BYD3_k127_5105872_1 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000001427 229.0
BYD3_k127_5105872_2 - - - - 0.0000000000000000000000000000000000000001654 158.0
BYD3_k127_5107385_0 MaoC like domain K14449,K18290 - 4.2.1.148,4.2.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 366.0
BYD3_k127_5107385_1 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000002344 172.0
BYD3_k127_5107385_2 Belongs to the HpcH HpaI aldolase family K01644,K08691 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006107,GO:0008150,GO:0008152,GO:0009987,GO:0015977,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0043167,GO:0043169,GO:0043427,GO:0043436,GO:0043648,GO:0044237,GO:0044281,GO:0046872,GO:0047777,GO:0050083,GO:0071704 4.1.3.24,4.1.3.25,4.1.3.34 0.0000000000000000000000000000000000006293 153.0
BYD3_k127_5111929_0 WYL domain - - - 0.00000000000000000000000000000000000000000000000000001966 196.0
BYD3_k127_5118929_0 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 415.0
BYD3_k127_5118929_1 XdhC and CoxI family K07402 - - 0.000000000000000000002655 101.0
BYD3_k127_5120019_0 phosphatase activity - - - 8.274e-210 667.0
BYD3_k127_5120019_1 PFAM phosphoesterase, PA-phosphatase related - - - 0.00000000000000000000000000000000000000000004806 169.0
BYD3_k127_5120019_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000001721 146.0
BYD3_k127_5120019_3 AMP binding - - - 0.0000000000000000004214 98.0
BYD3_k127_5120019_4 Universal stress protein family - - - 0.000000000000000001874 96.0
BYD3_k127_5120019_5 pyruvate kinase activity K00873 - 2.7.1.40 0.000009275 52.0
BYD3_k127_5122484_0 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 394.0
BYD3_k127_5122484_1 3-dehydroquinate dehydratase activity K00014,K03785,K13832 GO:0000166,GO:0003674,GO:0003824,GO:0003855,GO:0004764,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009712,GO:0009713,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018958,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0042537,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046189,GO:0046278,GO:0046279,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901615,GO:1901617 1.1.1.25,4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 338.0
BYD3_k127_5122484_2 peroxiredoxin activity - - - 0.0000000000003774 72.0
BYD3_k127_5126608_0 Thiolase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 436.0
BYD3_k127_5126608_1 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 397.0
BYD3_k127_5126608_2 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001403 267.0
BYD3_k127_5126608_3 AMP-binding enzyme C-terminal domain K02182 - 6.2.1.48 0.000000000000000000000000000000000000000000000000000000000000008822 228.0
BYD3_k127_5126608_4 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.00000000000000000000000000000000000000000003436 164.0
BYD3_k127_5126608_5 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000001336 99.0
BYD3_k127_5126608_6 Alpha Beta K06889 - - 0.00000005293 65.0
BYD3_k127_5126608_7 Prolyl oligopeptidase - - - 0.0000003717 63.0
BYD3_k127_5126608_8 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.000001144 61.0
BYD3_k127_5150831_0 Belongs to the CarB family K01955 GO:0000050,GO:0000166,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016597,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 563.0
BYD3_k127_5175197_0 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 406.0
BYD3_k127_5175725_0 Phosphate acyltransferases K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000001262 248.0
BYD3_k127_5175725_1 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000005144 117.0
BYD3_k127_5175725_2 Diacylglycerol kinase catalytic domain (presumed) - - - 0.00000004651 57.0
BYD3_k127_5175725_3 nuclear chromosome segregation - - - 0.00000193 57.0
BYD3_k127_5179377_0 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 424.0
BYD3_k127_5179377_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 297.0
BYD3_k127_5179377_2 PFAM peptidase K01438 - 3.5.1.16 0.00000000000000000000000000000008691 128.0
BYD3_k127_5181014_0 PFAM PP-loop domain protein K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000568 265.0
BYD3_k127_5181014_1 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000001032 197.0
BYD3_k127_518181_0 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000003851 60.0
BYD3_k127_518181_1 Bacterial membrane protein, YfhO - - - 0.00005236 53.0
BYD3_k127_5192642_0 Glutamate synthase K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008015 412.0
BYD3_k127_5192642_1 cyclic nucleotide-binding K01420,K10914 - - 0.000000000000000000000000000000000000000000000000000000000217 209.0
BYD3_k127_5192642_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000004101 106.0
BYD3_k127_5208408_0 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 597.0
BYD3_k127_5208408_1 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003515 280.0
BYD3_k127_5208408_2 pfam abc1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002296 240.0
BYD3_k127_5208408_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000003217 221.0
BYD3_k127_5208408_4 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788,K14153 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3,2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000006531 176.0
BYD3_k127_5208408_5 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000001052 145.0
BYD3_k127_5208408_6 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000002231 124.0
BYD3_k127_5208408_7 B12 binding domain - - - 0.000000000000000000000000001837 123.0
BYD3_k127_5208408_8 IMG reference gene - - - 0.000000003017 67.0
BYD3_k127_520994_0 von Willebrand factor (vWF) type A domain K02448 - - 0.00000000000000000000000000000000000000003375 166.0
BYD3_k127_5218819_0 PFAM Circadian clock protein KaiC central region K08482 - - 8.063e-245 764.0
BYD3_k127_5218819_1 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 604.0
BYD3_k127_5218819_2 COGs COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 462.0
BYD3_k127_5218819_3 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 428.0
BYD3_k127_5218819_4 Belongs to the ABC transporter superfamily K02010,K10112 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 363.0
BYD3_k127_5218819_5 glycerophosphodiester transmembrane transport K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009358 316.0
BYD3_k127_5218819_6 transmembrane transport K02025,K15771 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005646 283.0
BYD3_k127_5218819_7 endonuclease III K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008273 269.0
BYD3_k127_5218819_8 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004495 240.0
BYD3_k127_5218819_9 KaiB K08481 - - 0.0000000000000000000000000141 110.0
BYD3_k127_5223383_0 Urocanase Rossmann-like domain K01712 - 4.2.1.49 0.0000000000000000000000000000001954 123.0
BYD3_k127_5223383_1 - - - - 0.00000000002553 76.0
BYD3_k127_5224124_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 4.722e-234 737.0
BYD3_k127_5224124_1 - - - - 0.00000000000000000000000000000000000000000001906 170.0
BYD3_k127_5224124_2 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000001138 149.0
BYD3_k127_5224124_3 Iron-containing redox enzyme K06137 - 1.3.3.11 0.00000003429 63.0
BYD3_k127_5224124_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000003709 61.0
BYD3_k127_5224124_5 ATP synthase I chain - - - 0.0005125 49.0
BYD3_k127_5230908_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008155 616.0
BYD3_k127_5230908_1 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002026 304.0
BYD3_k127_5230908_2 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000003523 193.0
BYD3_k127_5230908_3 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.00000000000000000000000000000000000000001662 162.0
BYD3_k127_5235480_0 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008854 494.0
BYD3_k127_5235480_1 Thiamine pyrophosphate enzyme, central domain K01576 - 4.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 314.0
BYD3_k127_5235480_2 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 305.0
BYD3_k127_5235480_3 GYD domain - - - 0.000000000000008436 77.0
BYD3_k127_5235480_4 Helix-hairpin-helix motif K02237 - - 0.00000000008949 70.0
BYD3_k127_5235480_5 thiolester hydrolase activity K00627,K06889 - 2.3.1.12 0.0000000007309 72.0
BYD3_k127_5235480_6 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.0000000007859 65.0
BYD3_k127_5235480_7 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases K01303 - 3.4.19.1 0.000004541 59.0
BYD3_k127_5236850_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000799 491.0
BYD3_k127_5241761_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 479.0
BYD3_k127_5241761_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 450.0
BYD3_k127_5241761_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002648 277.0
BYD3_k127_5241761_3 PFAM CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000008389 229.0
BYD3_k127_5241761_4 transferase activity, transferring glycosyl groups K00720 - 2.4.1.80 0.0000000000000000000000000000000000000000000000000000000000009038 225.0
BYD3_k127_5241761_5 Preprotein translocase, YajC K03210 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000001147 101.0
BYD3_k127_5247864_0 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000001878 244.0
BYD3_k127_5253200_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.675e-230 722.0
BYD3_k127_5253200_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 297.0
BYD3_k127_5253200_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000001019 119.0
BYD3_k127_5253200_3 VanZ like family - - - 0.00000000000000000000006374 104.0
BYD3_k127_5253200_4 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000003799 67.0
BYD3_k127_5253200_5 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000038 56.0
BYD3_k127_5255125_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 421.0
BYD3_k127_5255125_1 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000274 278.0
BYD3_k127_5255125_2 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.00000000000000000000000000000000000000000000000000000000006778 216.0
BYD3_k127_5255125_3 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000000000003803 188.0
BYD3_k127_5255125_4 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000001675 145.0
BYD3_k127_5255125_5 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000134 140.0
BYD3_k127_5255125_6 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000006972 104.0
BYD3_k127_5255125_7 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000002048 78.0
BYD3_k127_5255125_8 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000009752 75.0
BYD3_k127_5265253_0 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008692 446.0
BYD3_k127_5265253_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004051 278.0
BYD3_k127_5265253_2 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002127 268.0
BYD3_k127_5265253_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000137 199.0
BYD3_k127_5265253_4 haloacid dehalogenase-like hydrolase K06019 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.1 0.0000000000000000000000000000000000000000009 164.0
BYD3_k127_5265253_5 methylamine metabolic process K15977 - - 0.0000000000001886 79.0
BYD3_k127_5265350_0 Elongation factor G, domain IV K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 498.0
BYD3_k127_5265350_1 Metalloenzyme superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000005551 235.0
BYD3_k127_5268917_0 Fumarase C C-terminus K01744 - 4.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 542.0
BYD3_k127_5268917_1 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00334,K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 441.0
BYD3_k127_5268917_2 formate dehydrogenase (NAD+) activity K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008039 419.0
BYD3_k127_5268917_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000001029 153.0
BYD3_k127_5268917_4 4Fe-4S dicluster domain K05524 - - 0.00000000000000000000000000000000000002809 145.0
BYD3_k127_5270975_0 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 314.0
BYD3_k127_5270975_1 - - - - 0.00001254 55.0
BYD3_k127_5275534_0 Methyltransferase domain K00598 - 2.1.1.144 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 329.0
BYD3_k127_5275534_1 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01667 - 4.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 302.0
BYD3_k127_5275534_2 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000002632 178.0
BYD3_k127_5304763_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000009412 263.0
BYD3_k127_5304763_1 surface antigen variable number - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002371 275.0
BYD3_k127_5304763_2 protein secretion K09800 - - 0.0000000000000000000000000000000000000000000000000000000006398 222.0
BYD3_k127_5304763_3 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.0000001419 63.0
BYD3_k127_5306309_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000005218 146.0
BYD3_k127_5306309_1 protein related to capsule biosynthesis enzymes K07154 - 2.7.11.1 0.00000000000000000000000000000000001064 137.0
BYD3_k127_5309115_0 Bacterial membrane protein YfhO - - - 0.00000000000000000004343 104.0
BYD3_k127_5309115_1 Polysaccharide biosynthesis protein - - - 0.00000000000103 78.0
BYD3_k127_5312201_0 TIGRFAM polyphosphate nucleotide phosphotransferase, PPK2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 329.0
BYD3_k127_5312201_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000153 209.0
BYD3_k127_5312201_2 Protein of unknown function (DUF1460) - - - 0.00000000000000000000004002 108.0
BYD3_k127_5319609_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 423.0
BYD3_k127_5319609_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 416.0
BYD3_k127_5320446_0 Photosynthesis system II assembly factor YCF48 - - - 0.0000000000000000000000000000000006312 145.0
BYD3_k127_5320446_1 Gram-negative bacterial TonB protein C-terminal - - - 0.0000004417 61.0
BYD3_k127_532972_0 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000555 251.0
BYD3_k127_5332434_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008133 399.0
BYD3_k127_5332434_1 phosphoesterase, PA-phosphatase related - - - 0.000000000000000000000000000000000001133 148.0
BYD3_k127_5332434_2 antibiotic catabolic process - - - 0.00000000000000000012 102.0
BYD3_k127_5332434_4 PFAM TonB-dependent Receptor Plug - - - 0.000008922 53.0
BYD3_k127_5335362_0 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 475.0
BYD3_k127_5335362_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000003831 252.0
BYD3_k127_5335362_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000002241 134.0
BYD3_k127_5335362_3 Ankyrin repeats (many copies) K06867,K21440 - - 0.000000000004777 76.0
BYD3_k127_5335362_4 - - - - 0.00001723 51.0
BYD3_k127_5335362_5 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00009637 49.0
BYD3_k127_5340969_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 359.0
BYD3_k127_5340969_1 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006058 324.0
BYD3_k127_5340969_2 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000001596 162.0
BYD3_k127_5340969_3 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000000008475 126.0
BYD3_k127_5340969_4 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000001085 89.0
BYD3_k127_5346123_0 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000001316 236.0
BYD3_k127_5346123_1 - - - - 0.0000000000000000000000000000000000001082 148.0
BYD3_k127_5346123_2 Lysin motif - - - 0.0000000000000000000000000000000000003777 146.0
BYD3_k127_5346123_3 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000001185 93.0
BYD3_k127_5350042_0 rRNA processing K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 0.00000000000000000000000000000000000000000000000000000003267 204.0
BYD3_k127_5350042_1 COG1596 Periplasmic protein involved in polysaccharide export K20988 - - 0.000000000009522 69.0
BYD3_k127_5353408_0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 1.417e-202 646.0
BYD3_k127_5353408_1 Tetratricopeptide repeat - - - 0.000000001959 66.0
BYD3_k127_5353487_0 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 563.0
BYD3_k127_5353487_1 protein kinase related protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 391.0
BYD3_k127_5353487_2 Iron-containing alcohol dehydrogenase K00001,K13954 - 1.1.1.1 0.0000000000000000000000000000000000004049 143.0
BYD3_k127_5359165_0 Transcriptional regulator - - - 4.563e-270 839.0
BYD3_k127_5359165_1 RNA-directed DNA polymerase (Reverse transcriptase) K00986 - 2.7.7.49 8.095e-200 634.0
BYD3_k127_5359165_2 Proposed nucleic acid binding domain - - - 0.000000000000000462 79.0
BYD3_k127_5366471_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001425 270.0
BYD3_k127_5366471_1 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000001345 134.0
BYD3_k127_5389388_0 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000002658 268.0
BYD3_k127_5389388_1 PFAM Rhomboid family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002587 252.0
BYD3_k127_5389388_2 ATPase activity K01990 - - 0.0000000000000000003958 89.0
BYD3_k127_5403003_0 glutamine synthetase K01915 - 6.3.1.2 2.38e-203 643.0
BYD3_k127_5403003_2 Domain of unknown function (DUF4442) K02614 - - 0.000000000000000000000000000248 119.0
BYD3_k127_5403003_3 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K07443 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0005488,GO:0005515,GO:0019899,GO:0097159,GO:1901363 2.1.1.63 0.0000000000000000000000006064 111.0
BYD3_k127_5403003_4 DinB family - - - 0.000000000000000005592 89.0
BYD3_k127_5407855_0 Bacterial transcriptional activator domain - - - 0.00000003556 66.0
BYD3_k127_5407855_1 PFAM Bacterial transcriptional activator domain - - - 0.0002224 46.0
BYD3_k127_5408228_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003193 344.0
BYD3_k127_5408228_1 reductase K00059 - 1.1.1.100 0.000000000000001264 78.0
BYD3_k127_5408228_2 CBS domain - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006950,GO:0006970,GO:0008150,GO:0009628,GO:0009651,GO:0009987,GO:0019725,GO:0042592,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0050897,GO:0065007,GO:0065008 - 0.00007303 52.0
BYD3_k127_5413498_0 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004554 299.0
BYD3_k127_5413498_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001505 283.0
BYD3_k127_5413498_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000007071 234.0
BYD3_k127_5413498_3 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000001358 190.0
BYD3_k127_5413498_4 peptidyl-tyrosine sulfation - - - 0.000006509 56.0
BYD3_k127_5415154_0 NPCBM-associated, NEW3 domain of alpha-galactosidase - - - 0.0000000000000005031 92.0
BYD3_k127_5432499_0 Belongs to the MlaE permease family K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005595 256.0
BYD3_k127_5432499_1 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008131 245.0
BYD3_k127_5432499_2 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000006643 226.0
BYD3_k127_5432499_3 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000000000000000000000000000005083 148.0
BYD3_k127_5459654_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 4.108e-311 963.0
BYD3_k127_5459654_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 465.0
BYD3_k127_5459654_2 translation release factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000754 244.0
BYD3_k127_5459654_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000007818 99.0
BYD3_k127_54599_0 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000006754 163.0
BYD3_k127_54599_1 PFAM TPR repeat-containing protein - - - 0.0000001339 60.0
BYD3_k127_5462130_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 543.0
BYD3_k127_5469202_0 Sodium:dicarboxylate symporter family K03309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 401.0
BYD3_k127_5469202_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007179 314.0
BYD3_k127_5469202_2 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000007387 209.0
BYD3_k127_5469202_3 histidine kinase A domain protein - - - 0.00000000000000000002558 96.0
BYD3_k127_5474293_0 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 365.0
BYD3_k127_5474293_1 BON domain - - - 0.00000000000000000000000000000000000000000000001252 177.0
BYD3_k127_5474293_2 glycolate biosynthetic process K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000004111 164.0
BYD3_k127_5474293_3 Membrane-bound dehydrogenase domain protein - - - 0.0000000004128 67.0
BYD3_k127_5474293_4 helix_turn_helix multiple antibiotic resistance protein K06075 - - 0.000003599 55.0
BYD3_k127_5478006_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006062 509.0
BYD3_k127_5478006_1 beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 330.0
BYD3_k127_5478006_2 SCO1/SenC K07152,K08976 - - 0.00000000000000000000000000000000000000000000000000000000000000000004824 238.0
BYD3_k127_5478006_3 SCO1/SenC K07152,K08976 - - 0.00000000000000000000000000000000000000000000000000000000009522 212.0
BYD3_k127_5478006_4 DoxX - - - 0.000000000000000001522 86.0
BYD3_k127_5479749_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007034 578.0
BYD3_k127_5479749_1 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000002796 244.0
BYD3_k127_5479749_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000004052 187.0
BYD3_k127_5479749_3 Protein of unknown function (DUF2470) K07226 - - 0.00000000000000002226 86.0
BYD3_k127_5479749_4 Acylphosphatase K01512 GO:0003674,GO:0003824,GO:0003998,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0016787,GO:0016817,GO:0016818,GO:0050896 3.6.1.7 0.0000000000000001079 83.0
BYD3_k127_5479749_5 - - - - 0.00000000006204 63.0
BYD3_k127_5479749_6 - - - - 0.00001123 50.0
BYD3_k127_5483556_0 thiolester hydrolase activity K06889 - - 0.000000000000000000000269 102.0
BYD3_k127_5483556_1 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000003165 74.0
BYD3_k127_5484010_0 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000000000000000000000000000003863 180.0
BYD3_k127_5484010_1 -O-antigen K18814 - - 0.00000000000000000000008373 115.0
BYD3_k127_5484010_2 Domain of unknown function DUF11 - - - 0.00000001167 68.0
BYD3_k127_5484010_3 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000001301 51.0
BYD3_k127_5487379_0 deaminated base DNA N-glycosylase activity K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033958,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000995 282.0
BYD3_k127_5487379_1 Alpha/beta hydrolase family - - - 0.000000000000000606 86.0
BYD3_k127_5490301_0 methyltransferase activity K00574,K12240,K18534,K19620,K20444 - 2.1.1.295,2.1.1.79 0.0000000000000000000000000000000000000000000000000005666 186.0
BYD3_k127_5490301_1 Uncharacterised nucleotidyltransferase - - - 0.0000004905 61.0
BYD3_k127_5490301_2 -O-antigen - - - 0.000004166 59.0
BYD3_k127_5505199_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 360.0
BYD3_k127_5505199_1 Short-chain dehydrogenase reductase sdr - - - 0.0000000000000000000000001996 111.0
BYD3_k127_5507961_0 AIR synthase related protein, C-terminal domain K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007421 293.0
BYD3_k127_5507961_1 DinB superfamily - - - 0.000000000000000000000000000000000000422 145.0
BYD3_k127_5516041_0 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 606.0
BYD3_k127_5549207_0 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000002737 205.0
BYD3_k127_5558281_0 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 334.0
BYD3_k127_5558281_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000002788 236.0
BYD3_k127_5558281_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000004709 209.0
BYD3_k127_5558281_3 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000001698 213.0
BYD3_k127_5558281_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000000000000004437 194.0
BYD3_k127_5558281_5 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000003533 134.0
BYD3_k127_5558281_6 Histidine kinase - - - 0.0000000005631 73.0
BYD3_k127_5558281_7 Two component signalling adaptor domain K03408 - - 0.0000003197 60.0
BYD3_k127_5567455_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.277e-203 662.0
BYD3_k127_5567455_2 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 290.0
BYD3_k127_5567455_3 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001454 261.0
BYD3_k127_5567715_0 Secretion system protein K12276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 537.0
BYD3_k127_5567715_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007075 315.0
BYD3_k127_5567715_2 Lysin motif K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006833 277.0
BYD3_k127_5567715_3 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000004139 153.0
BYD3_k127_5567715_4 Cell shape determining protein MreB Mrl K03569 - - 0.0000000002832 65.0
BYD3_k127_5573129_0 PFAM gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 394.0
BYD3_k127_5573129_1 peptidase dimerisation domain K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000005191 224.0
BYD3_k127_5573129_2 Thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.0000000000000000000000000000000000000000000000000000003149 199.0
BYD3_k127_5573129_3 photosynthesis - - - 0.000000000000000000000000000000000000000000000000000005217 196.0
BYD3_k127_5586443_0 TIGRFAM conserved repeat domain protein - - - 0.00000000000000000000000000000000000000000000000000000003074 213.0
BYD3_k127_5586443_1 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000006583 115.0
BYD3_k127_55871_0 nitrite transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 459.0
BYD3_k127_55871_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008695 301.0
BYD3_k127_5591340_0 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 292.0
BYD3_k127_5591340_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003765 248.0
BYD3_k127_5591340_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000006989 211.0
BYD3_k127_5591340_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000001297 155.0
BYD3_k127_5598541_0 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 478.0
BYD3_k127_5598541_1 ATPases associated with a variety of cellular activities K10823,K10824 - 3.6.3.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 446.0
BYD3_k127_5598541_2 Belongs to the ABC transporter superfamily K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 428.0
BYD3_k127_5598541_3 'ABC-type dipeptide oligopeptide nickel transport K02034,K15582 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 360.0
BYD3_k127_5598541_4 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K15581 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 302.0
BYD3_k127_5598541_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000002594 230.0
BYD3_k127_5598541_6 Cation transport regulator - - - 0.000000000000000000000000000000001374 135.0
BYD3_k127_5598541_7 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.000000000000000000004927 101.0
BYD3_k127_5598541_8 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000004977 82.0
BYD3_k127_5603023_0 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000001523 216.0
BYD3_k127_560441_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004375 532.0
BYD3_k127_560441_1 belongs to the PRA-CH family K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000006464 147.0
BYD3_k127_5608454_0 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 352.0
BYD3_k127_5608454_1 Biotin-lipoyl like K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003717 258.0
BYD3_k127_5610502_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000968 283.0
BYD3_k127_5614576_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000005153 245.0
BYD3_k127_5614576_1 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000000000001223 226.0
BYD3_k127_5614576_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000000000000000000000000000000000000003581 175.0
BYD3_k127_5614576_3 TolA C-terminal K03646 - - 0.00004242 55.0
BYD3_k127_5619875_0 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 400.0
BYD3_k127_5619875_1 ArgK protein K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 342.0
BYD3_k127_5619875_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002504 277.0
BYD3_k127_5619875_3 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003577 237.0
BYD3_k127_5619875_4 pfkB family carbohydrate kinase K00852,K00856 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004001,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005975,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019200,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032552,GO:0032553,GO:0032554,GO:0032555,GO:0032559,GO:0032560,GO:0032561,GO:0032567,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046390,GO:0046483,GO:0046835,GO:0046872,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.15,2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000001735 237.0
BYD3_k127_5619875_5 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.00000000000000000000000000000004389 140.0
BYD3_k127_5619875_6 COG0346 Lactoylglutathione lyase and related lyases K05606 - 5.1.99.1 0.000000000000000000000000003279 112.0
BYD3_k127_5619875_7 Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000003663 67.0
BYD3_k127_5619875_8 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0001618 50.0
BYD3_k127_5635792_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004791 272.0
BYD3_k127_5635792_1 Dihydrodipicolinate reductase, C-terminus K00215 - 1.17.1.8 0.00000000000000000000000000000000006252 138.0
BYD3_k127_56562_0 Male sterility protein K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000003254 210.0
BYD3_k127_56562_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000001715 201.0
BYD3_k127_56562_2 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000001383 134.0
BYD3_k127_5662182_0 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000004396 265.0
BYD3_k127_5662182_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000009147 124.0
BYD3_k127_5673706_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008184 387.0
BYD3_k127_5673706_1 PQQ-like domain K17760 - 1.1.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009725 341.0
BYD3_k127_5673706_2 domain protein K01637,K20276 - 4.1.3.1 0.000000000000003787 85.0
BYD3_k127_5673706_3 Helix-turn-helix domain - - - 0.0005464 46.0
BYD3_k127_5682890_0 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 330.0
BYD3_k127_5689474_0 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005382 242.0
BYD3_k127_5695048_0 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008654,GO:0009029,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0046401,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.7.1.130 0.0000000000000000000000000000000000000000000000000000007749 204.0
BYD3_k127_5701855_0 Polysaccharide biosynthesis protein K02851 - 2.7.8.33,2.7.8.35 3.496e-207 660.0
BYD3_k127_5701855_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 499.0
BYD3_k127_5701855_10 tRNA processing K06864 - - 0.0000001343 59.0
BYD3_k127_5701855_2 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 410.0
BYD3_k127_5701855_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005168 379.0
BYD3_k127_5701855_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000463 207.0
BYD3_k127_5701855_5 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000001099 145.0
BYD3_k127_5701855_6 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000003263 129.0
BYD3_k127_5701855_7 Putative phosphatase (DUF442) - - - 0.0000000000000000000386 98.0
BYD3_k127_5701855_8 - - - - 0.000000000000000003131 95.0
BYD3_k127_5701855_9 Ribosomal protein L35 K02916 - - 0.000000000000000004262 85.0
BYD3_k127_5704605_0 Tryptophan halogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000837 344.0
BYD3_k127_5704605_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000002463 228.0
BYD3_k127_5704605_2 Coenzyme A transferase - - - 0.00000000000000004798 87.0
BYD3_k127_5707374_0 Protein of unknown function (DUF2847) - - - 0.000000000000000000000000001804 116.0
BYD3_k127_5707374_1 TIGRFAM VWFA-related Acidobacterial domain - - - 0.000000000000000000002898 109.0
BYD3_k127_5707374_2 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.00000000000007297 83.0
BYD3_k127_5707538_0 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003121 271.0
BYD3_k127_5707538_1 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000009392 83.0
BYD3_k127_5710457_0 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008703 413.0
BYD3_k127_5713947_0 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.0000000000000000000000001388 120.0
BYD3_k127_5714350_0 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 350.0
BYD3_k127_5714350_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000004227 114.0
BYD3_k127_572085_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 4.316e-266 829.0
BYD3_k127_572085_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K04105,K04110 - 6.2.1.25,6.2.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 558.0
BYD3_k127_572085_10 PFAM PBS lyase - - - 0.0001674 47.0
BYD3_k127_572085_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 336.0
BYD3_k127_572085_3 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000012 215.0
BYD3_k127_572085_4 ROK family - - - 0.0000000000000000000000000000000000000000000000000000000005797 214.0
BYD3_k127_572085_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000001378 209.0
BYD3_k127_572085_6 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000005959 166.0
BYD3_k127_572085_7 Thioesterase-like superfamily K01075 - 3.1.2.23 0.00000000000000000000001378 106.0
BYD3_k127_572085_8 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000198 100.0
BYD3_k127_572085_9 - - - - 0.0000002049 61.0
BYD3_k127_5738711_0 Elongator protein 3, MiaB family, Radical SAM K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 310.0
BYD3_k127_5738711_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000008507 163.0
BYD3_k127_5746751_0 Sodium:sulfate symporter transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 541.0
BYD3_k127_5746751_1 Ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002801 252.0
BYD3_k127_5754681_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007425 397.0
BYD3_k127_5754681_1 xylose isomerase activity K01805 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009045,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046365,GO:0071704,GO:1901575 5.3.1.5 0.000000001233 61.0
BYD3_k127_5773800_0 Bacterial PH domain - - - 0.0000000000392 66.0
BYD3_k127_5773800_1 - - - - 0.000009741 57.0
BYD3_k127_5774767_0 Belongs to the ClpA ClpB family K03696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 486.0
BYD3_k127_5774767_1 Chaperone - - - 0.000000000000000008402 94.0
BYD3_k127_5796420_0 carboxylic ester hydrolase activity K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 443.0
BYD3_k127_5796420_1 PFAM Helix-turn-helix, type 11 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 374.0
BYD3_k127_5796420_2 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 361.0
BYD3_k127_5796420_3 Divergent 4Fe-4S mono-cluster - - - 0.0000000000000000000000000000000000000000000000000000001203 198.0
BYD3_k127_5802534_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000263 237.0
BYD3_k127_5802534_1 Peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000000001681 184.0
BYD3_k127_5802534_2 Putative glutamine amidotransferase - - - 0.0000002356 53.0
BYD3_k127_5805213_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 618.0
BYD3_k127_5805213_1 Heparinase II/III-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 333.0
BYD3_k127_5810244_0 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004087 268.0
BYD3_k127_5810244_1 thiolester hydrolase activity K06889 - - 0.000000001809 69.0
BYD3_k127_5816099_0 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 434.0
BYD3_k127_5816251_0 cAMP biosynthetic process - - - 0.0000000000000000000000000000003531 131.0
BYD3_k127_5816251_1 dTDP biosynthetic process K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000000003439 80.0
BYD3_k127_5816251_2 transcriptional regulator, SARP family - - - 0.00001663 51.0
BYD3_k127_5853805_0 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009937 502.0
BYD3_k127_5853805_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005544 481.0
BYD3_k127_5853805_2 - K07484 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 349.0
BYD3_k127_5853805_3 Protein of unknown function (DUF1385) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001052 256.0
BYD3_k127_5853805_4 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000009001 231.0
BYD3_k127_5853805_5 50S ribosomal protein L31 K02909 - - 0.00000000000000000000000002607 109.0
BYD3_k127_5874243_0 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 340.0
BYD3_k127_5874243_1 xanthine dehydrogenase activity K04108 - 1.3.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005277 272.0
BYD3_k127_5874243_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.000000000002002 70.0
BYD3_k127_5874243_3 PFAM CHAD domain containing protein - - - 0.0000271 53.0
BYD3_k127_5876764_0 NapC/NirT cytochrome c family, N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 526.0
BYD3_k127_5876764_1 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 494.0
BYD3_k127_5876764_10 Beta/Gamma crystallin - - - 0.0000001009 59.0
BYD3_k127_5876764_2 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009696 467.0
BYD3_k127_5876764_3 TipAS antibiotic-recognition domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003007 231.0
BYD3_k127_5876764_4 Prolyl 4-hydroxylase alpha subunit homologues. - - - 0.00000000000000000000000000000000000000004272 161.0
BYD3_k127_5876764_5 membrane - - - 0.0000000000000000000000000000000000007328 144.0
BYD3_k127_5876764_6 Metallo-peptidase family M12 - - - 0.00000000000000000000000000008852 134.0
BYD3_k127_5876764_7 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000001495 130.0
BYD3_k127_5876764_8 hemerythrin HHE cation binding domain - - - 0.000000000000000000000001486 111.0
BYD3_k127_5876764_9 YwiC-like protein - - - 0.0000000000000000004047 97.0
BYD3_k127_587963_0 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 480.0
BYD3_k127_587963_1 acetyl-coa acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 410.0
BYD3_k127_587963_2 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002598 276.0
BYD3_k127_587963_3 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000004807 203.0
BYD3_k127_587963_4 Belongs to the thiolase family - - - 0.00000000000000000000000000000000000000000000000000000001506 206.0
BYD3_k127_587963_5 amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000664 196.0
BYD3_k127_587963_6 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000002251 168.0
BYD3_k127_587963_7 nucleic-acid-binding protein containing a Zn-ribbon - - - 0.0000000000000000000000000000000001689 137.0
BYD3_k127_587963_8 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0000002029 61.0
BYD3_k127_587963_9 Putative regulatory protein - - - 0.00009527 48.0
BYD3_k127_5882439_0 Belongs to the PEP-utilizing enzyme family K01006,K01007 - 2.7.9.1,2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 439.0
BYD3_k127_5883363_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 604.0
BYD3_k127_5883363_1 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000001362 220.0
BYD3_k127_5883363_2 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000004099 102.0
BYD3_k127_5888420_0 peptidase S9B dipeptidylpeptidase IV domain protein K01278 - 3.4.14.5 5.276e-319 996.0
BYD3_k127_5888420_1 PFAM Aminotransferase class I and II K05825 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 328.0
BYD3_k127_5888420_2 Amino acid transporter K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006954 308.0
BYD3_k127_5888420_3 carboxylic acid catabolic process - - - 0.00000000000000000000000000000000000000000000000000006166 197.0
BYD3_k127_5888420_5 PQQ-like domain - - - 0.000000000000000000000000000004116 134.0
BYD3_k127_5888420_6 Alginate export - - - 0.00004621 50.0
BYD3_k127_5889433_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005612 563.0
BYD3_k127_5889433_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 397.0
BYD3_k127_5889433_2 hyperosmotic response - - - 0.00000000007863 70.0
BYD3_k127_5889641_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 293.0
BYD3_k127_5889641_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431 - 3.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008958 284.0
BYD3_k127_5889641_2 Thioesterase superfamily - - - 0.000000000000000000000000000000004035 133.0
BYD3_k127_5889641_3 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000001384 87.0
BYD3_k127_5905411_0 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 484.0
BYD3_k127_5905411_1 Ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000003572 155.0
BYD3_k127_5911632_0 5TM C-terminal transporter carbon starvation CstA K06200 - - 3.783e-223 705.0
BYD3_k127_5911632_1 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000002605 264.0
BYD3_k127_5911632_2 TIGRFAM MazG family protein K02428,K02499,K04765 - 3.6.1.66,3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000006172 261.0
BYD3_k127_5912316_0 Elongation factor SelB winged helix 3 K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 458.0
BYD3_k127_5912316_1 amine oxidase K00276 - 1.4.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007652 413.0
BYD3_k127_5912316_2 thiolester hydrolase activity K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002812 249.0
BYD3_k127_5912316_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000002188 177.0
BYD3_k127_5912500_0 Uncharacterised protein family (UPF0182) K09118 - - 0.0000000000000000000000000000000000000000000000000002176 201.0
BYD3_k127_5924955_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 392.0
BYD3_k127_5924955_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 351.0
BYD3_k127_5924955_2 plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000000003674 136.0
BYD3_k127_5924955_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000001873 124.0
BYD3_k127_5925069_0 Serine Threonine protein kinase - - - 0.0 1131.0
BYD3_k127_5925069_1 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009773 463.0
BYD3_k127_5925069_10 Protein of unknown function (DUF3616) - - - 0.0000000000000000000000000000883 128.0
BYD3_k127_5925069_11 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000003202 111.0
BYD3_k127_5925069_12 - - - - 0.000000000000000000512 90.0
BYD3_k127_5925069_13 Anti-sigma factor K07167 - - 0.00000000001332 75.0
BYD3_k127_5925069_2 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 413.0
BYD3_k127_5925069_3 transcription factor binding K15836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007132 436.0
BYD3_k127_5925069_4 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 392.0
BYD3_k127_5925069_5 Transcriptional regulatory protein, C terminal K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003961 273.0
BYD3_k127_5925069_6 protein histidine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002285 280.0
BYD3_k127_5925069_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000001324 192.0
BYD3_k127_5925069_8 protein possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000000000000000000006241 175.0
BYD3_k127_5925069_9 DNA-templated transcription, initiation K03088 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0010468,GO:0010565,GO:0016020,GO:0019216,GO:0019217,GO:0019222,GO:0030312,GO:0031323,GO:0044464,GO:0050789,GO:0050794,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090 - 0.00000000000000000000000000000000000000000001071 169.0
BYD3_k127_5926432_0 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 439.0
BYD3_k127_5926432_1 Cys/Met metabolism PLP-dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 377.0
BYD3_k127_5926432_2 Transketolase, pyrimidine binding domain K00167 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000156 280.0
BYD3_k127_5926432_3 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000006529 252.0
BYD3_k127_5931603_0 Amidohydrolase family - - - 5.204e-196 627.0
BYD3_k127_5931603_1 Zn peptidase - - - 0.00000000000000000000000000000000000000000000000000000000003048 227.0
BYD3_k127_5931603_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000002488 224.0
BYD3_k127_5931603_3 cell septum assembly - - - 0.00000000000000000000000000000000006433 146.0
BYD3_k127_5936224_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 4.486e-321 1022.0
BYD3_k127_5936224_1 protein histidine kinase activity K11383 - 2.7.13.3 0.0000000000000000000000000000000001483 143.0
BYD3_k127_5936224_2 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000005111 131.0
BYD3_k127_5936224_3 SurA N-terminal domain K03769 - 5.2.1.8 0.00000000000000000001565 103.0
BYD3_k127_5936224_4 oxidoreductase activity K12511 - - 0.00000000000001045 85.0
BYD3_k127_5937162_0 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000002908 242.0
BYD3_k127_5937162_1 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000006599 158.0
BYD3_k127_5955821_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 457.0
BYD3_k127_5955821_1 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 411.0
BYD3_k127_5955821_10 Methyltransferase domain - - - 0.0000000000000000000000005058 106.0
BYD3_k127_5955821_2 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 407.0
BYD3_k127_5955821_3 acyl-CoA dehydrogenase activity K00248,K00253 - 1.3.8.1,1.3.8.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009248 357.0
BYD3_k127_5955821_4 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 358.0
BYD3_k127_5955821_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003949 353.0
BYD3_k127_5955821_6 Metallo-peptidase family M12 - - - 0.0000000000000000000000000000000006644 144.0
BYD3_k127_5955821_7 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.000000000000000000000000000003156 120.0
BYD3_k127_5955821_8 Methyltransferase domain - - - 0.00000000000000000000000000001643 124.0
BYD3_k127_5955821_9 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000002035 122.0
BYD3_k127_5956074_0 PFAM Prolyl oligopeptidase family - - - 6.331e-251 784.0
BYD3_k127_5977798_0 efflux transmembrane transporter activity K02004 - - 4.094e-225 723.0
BYD3_k127_5977798_1 Y_Y_Y domain - - - 0.000000004619 57.0
BYD3_k127_5984813_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 421.0
BYD3_k127_5984813_1 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 301.0
BYD3_k127_5984813_2 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000003865 239.0
BYD3_k127_5984813_3 Aerotolerance regulator N-terminal - - - 0.000000000000000000000000000000000000000000000000000005464 209.0
BYD3_k127_5984813_4 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000001339 172.0
BYD3_k127_5990399_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 2.937e-226 710.0
BYD3_k127_5990399_1 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001172 271.0
BYD3_k127_5990399_2 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000003953 208.0
BYD3_k127_5997831_0 Aspartyl protease - - - 0.000000000001477 80.0
BYD3_k127_6000155_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 496.0
BYD3_k127_6000155_1 RmlD substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 407.0
BYD3_k127_6000155_2 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 314.0
BYD3_k127_6000155_4 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000002384 179.0
BYD3_k127_6000155_5 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000007638 98.0
BYD3_k127_6004842_0 radical SAM domain protein - - - 7.121e-288 895.0
BYD3_k127_6004842_1 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 463.0
BYD3_k127_6004842_2 Belongs to the PdxA family K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000001001 205.0
BYD3_k127_6012138_0 Photosynthesis system II assembly factor YCF48 - - - 0.00000000000000000000000000000001095 139.0
BYD3_k127_6012138_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000002471 141.0
BYD3_k127_6048761_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 387.0
BYD3_k127_6048761_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 317.0
BYD3_k127_6048761_2 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000001118 147.0
BYD3_k127_6048761_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000247 138.0
BYD3_k127_6048761_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000008577 125.0
BYD3_k127_6058602_0 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005581 454.0
BYD3_k127_6058602_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 304.0
BYD3_k127_6058602_2 - - - - 0.0000000007627 69.0
BYD3_k127_6059481_0 Succinyl-CoA ligase like flavodoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 362.0
BYD3_k127_6059481_1 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - - - 0.0000000000000000000000000000000000000000000004326 169.0
BYD3_k127_6059481_2 F420H(2)-dependent quinone reductase - - - 0.00000000000002073 79.0
BYD3_k127_6059481_3 TM2 domain - - - 0.00004046 47.0
BYD3_k127_6069010_0 Prolyl oligopeptidase K01322 - 3.4.21.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006015 610.0
BYD3_k127_6069010_1 glutamate carboxypeptidase K01301 - 3.4.17.21 0.00000000000000000000000000004603 120.0
BYD3_k127_6070540_0 Glycosyl transferases group 1 - - - 0.00000000000000000001878 106.0
BYD3_k127_6070540_1 CHAT domain - - - 0.0000004757 61.0
BYD3_k127_6077827_0 Major Facilitator Superfamily K03535 - - 0.00000000000000000000000000000000000000000000000000000000000000003827 239.0
BYD3_k127_6077827_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000003888 203.0
BYD3_k127_6077827_2 Stress responsive A/B Barrel Domain - - - 0.00000162 55.0
BYD3_k127_6077827_3 peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.0004295 47.0
BYD3_k127_6079493_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 3.366e-202 653.0
BYD3_k127_6079493_1 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006984 430.0
BYD3_k127_6079493_2 PFAM oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 383.0
BYD3_k127_6079493_3 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02052,K11072 - 3.6.3.30,3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 367.0
BYD3_k127_6079493_4 transferase hexapeptide K13018 - 2.3.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000612 276.0
BYD3_k127_6079493_5 PFAM binding-protein-dependent transport systems inner membrane component K11071 - - 0.000000000000000000000000000000000000000000000000000002161 196.0
BYD3_k127_6079493_6 domain protein K02238 - - 0.000000000000000000000000000000000000000000000000001541 193.0
BYD3_k127_6079493_7 Belongs to the ArsC family K00537 - 1.20.4.1 0.000000000000000000000000000000000001644 141.0
BYD3_k127_6079493_8 Protein of unknown function (DUF3006) - - - 0.0000001147 57.0
BYD3_k127_6079493_9 integral membrane protein - - - 0.0000006388 61.0
BYD3_k127_608320_0 serine-type peptidase activity K01303,K12132 - 2.7.11.1,3.4.19.1 5e-324 1015.0
BYD3_k127_608320_1 Carboxypeptidase regulatory-like domain - - - 5.316e-203 646.0
BYD3_k127_608320_2 Zn-dependent dipeptidase, microsomal dipeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 524.0
BYD3_k127_608320_3 COG0208 Ribonucleotide reductase, beta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001308 273.0
BYD3_k127_608320_4 N-Acetylmuramoyl-L-alanine amidase K01207,K01447,K11066,K21574 - 3.2.1.3,3.2.1.52,3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000001546 264.0
BYD3_k127_6087771_0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 598.0
BYD3_k127_6087771_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000001195 222.0
BYD3_k127_6089306_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 493.0
BYD3_k127_6089306_1 AAA ATPase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004792 464.0
BYD3_k127_6089306_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 437.0
BYD3_k127_6089306_3 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 396.0
BYD3_k127_6089306_4 SpoIVB peptidase S55 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 389.0
BYD3_k127_6089306_5 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 317.0
BYD3_k127_6089306_6 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 302.0
BYD3_k127_6089306_7 Ribosomal RNA methyltransferase (FmrO) K18845 - 2.1.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 287.0
BYD3_k127_6089306_8 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000008094 175.0
BYD3_k127_6089306_9 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000114 119.0
BYD3_k127_6092988_0 helicase superfamily c-terminal domain - - - 0.000000000000000000000000000000000000000000001472 181.0
BYD3_k127_6105585_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000001336 260.0
BYD3_k127_6105585_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000002632 234.0
BYD3_k127_6105585_2 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.0000000000000000000000009568 116.0
BYD3_k127_6105585_3 domain, Protein - - - 0.00000000000000002218 85.0
BYD3_k127_6111076_0 Belongs to the peptidase M16 family K07263 - - 3.366e-236 744.0
BYD3_k127_6111076_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 395.0
BYD3_k127_6111076_2 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000005198 100.0
BYD3_k127_6115600_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005744 296.0
BYD3_k127_612911_0 PFAM sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005565 300.0
BYD3_k127_6132349_0 efflux transmembrane transporter activity K02004 - - 4.497e-239 763.0
BYD3_k127_6132349_1 Aldo/keto reductase family K00002 - 1.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 361.0
BYD3_k127_6132349_2 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000001723 194.0
BYD3_k127_6134823_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 5.505e-261 811.0
BYD3_k127_6134823_1 nitrite transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006456 363.0
BYD3_k127_6134823_2 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 324.0
BYD3_k127_6134823_3 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.000000000000000000000000000000000000000000000000000000002559 209.0
BYD3_k127_6134823_4 - - - - 0.0000000000000000000137 93.0
BYD3_k127_6138895_0 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000000003873 157.0
BYD3_k127_6138895_1 Tetratricopeptide repeat protein - - - 0.000005733 56.0
BYD3_k127_6139203_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000006864 151.0
BYD3_k127_6139203_1 Tetratricopeptide repeat - - - 0.00000000000001264 80.0
BYD3_k127_6143530_0 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 315.0
BYD3_k127_6143530_1 PFAM glycosyl transferase group 1 - - - 0.000000000000000002126 88.0
BYD3_k127_6153055_0 Fibronectin type 3 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 442.0
BYD3_k127_6153055_1 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006963 423.0
BYD3_k127_6153055_2 Tetratricopeptide repeat - - - 0.00002392 56.0
BYD3_k127_6164625_0 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008756 392.0
BYD3_k127_6167061_0 beta-glucosidase activity K05350 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009069 418.0
BYD3_k127_6167061_1 Glycosyl hydrolases family 43 - - - 0.000000000000000000000000000000000000000000000000000004409 204.0
BYD3_k127_6168401_0 Creatinine amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 448.0
BYD3_k127_6168401_1 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 419.0
BYD3_k127_6168401_2 PFAM Na dependent nucleoside transporter K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009165 372.0
BYD3_k127_6168401_3 TonB-dependent Receptor Plug Domain K02014,K16092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009864 327.0
BYD3_k127_6168401_4 ThiJ PfpI - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 302.0
BYD3_k127_6168401_5 Putative peptidoglycan binding domain - - - 0.00008575 52.0
BYD3_k127_6176977_0 AMP-dependent synthetase and ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 516.0
BYD3_k127_6176977_1 PFAM gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 493.0
BYD3_k127_6176977_2 Ketopantoate reductase PanE/ApbA C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000982 369.0
BYD3_k127_6176977_3 Di-haem oxidoreductase, putative peroxidase K01201 - 3.2.1.45 0.00000000000000000000000000000000000000000000006028 187.0
BYD3_k127_6176977_4 belongs to the aldehyde dehydrogenase family K00294,K22187 - 1.2.1.88 0.0000000000004469 69.0
BYD3_k127_6176977_5 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.0000004997 61.0
BYD3_k127_6186904_0 BlaR1 peptidase M56 - - - 0.0000000000000000000000000000000000000003044 168.0
BYD3_k127_6190329_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 493.0
BYD3_k127_6190329_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.000000000000000000000000000000000000000004478 157.0
BYD3_k127_6192545_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000008858 221.0
BYD3_k127_6192545_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000008497 134.0
BYD3_k127_6193892_0 Dienelactone hydrolase family - - - 0.0 1198.0
BYD3_k127_6193892_1 His Kinase A (phosphoacceptor) domain K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 544.0
BYD3_k127_6193892_2 cobalamin binding K01647,K18997,K22491 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000001725 249.0
BYD3_k127_6193892_3 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000007794 241.0
BYD3_k127_6193892_4 Lipocalin / cytosolic fatty-acid binding protein family K03098 - - 0.000000000000000000000000000000000000000000000000000000000000006577 220.0
BYD3_k127_6193892_5 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.00000000000000000000000000000000000000000000000000000006979 199.0
BYD3_k127_6193892_6 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000004011 151.0
BYD3_k127_6193892_7 Thermophilic metalloprotease (M29) - - - 0.00000000000000000000000000000000002834 151.0
BYD3_k127_6193892_8 AAA ATPase domain - - - 0.0002687 53.0
BYD3_k127_6197075_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 440.0
BYD3_k127_619935_0 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 8.329e-195 618.0
BYD3_k127_619935_1 ROK family K00886 - 2.7.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006867 273.0
BYD3_k127_619935_2 6-phosphogluconolactonase K01057 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009987,GO:0016787,GO:0016788,GO:0017057,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0052689,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000003868 269.0
BYD3_k127_6203986_0 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006428 581.0
BYD3_k127_6203986_1 heat shock protein binding - - - 0.00000004575 65.0
BYD3_k127_6203986_2 Cytochrome c7 and related cytochrome c - - - 0.0000002301 62.0
BYD3_k127_6207394_0 anaphase-promoting complex-dependent catabolic process - - - 0.0000000000000000000000000000000000000000000000003722 180.0
BYD3_k127_6207394_1 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000008321 134.0
BYD3_k127_6207394_2 pfam abc1 - - - 0.000000000000000000000002096 108.0
BYD3_k127_6210680_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 488.0
BYD3_k127_6210680_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 395.0
BYD3_k127_6210680_2 Fibronectin-binding protein - - - 0.000000000000000000000000000000000000000000008181 183.0
BYD3_k127_6210680_3 STAS domain K04749 - - 0.00000000000000000000000000000000000000001438 155.0
BYD3_k127_6210680_4 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000363 132.0
BYD3_k127_6210680_5 Caspase domain - - - 0.00000000000000000000000000004368 135.0
BYD3_k127_6210680_6 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.000000000000000000000000003485 116.0
BYD3_k127_6210680_7 Tricorn protease homolog - - - 0.00000000000000001461 94.0
BYD3_k127_6210680_8 Tetratricopeptide repeat - - - 0.000000002142 71.0
BYD3_k127_6210680_9 RDD family - - - 0.00000001018 67.0
BYD3_k127_6214055_0 RmlD substrate binding domain K01784,K02473,K03274,K08678 - 4.1.1.35,5.1.3.2,5.1.3.20,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 371.0
BYD3_k127_6214055_1 Carbamoyltransferase C-terminus K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 367.0
BYD3_k127_6215068_0 Cys/Met metabolism PLP-dependent enzyme K01758 - 4.4.1.1 0.0000000000000000000000000000000000000000000000000006307 186.0
BYD3_k127_6215068_1 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000000000007939 118.0
BYD3_k127_6215068_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000115 60.0
BYD3_k127_621947_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006746 424.0
BYD3_k127_621947_1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000001109 61.0
BYD3_k127_6224095_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 313.0
BYD3_k127_6224095_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 297.0
BYD3_k127_6229108_0 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 335.0
BYD3_k127_6229108_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000004474 232.0
BYD3_k127_6229108_2 lipoprotein localization to outer membrane K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000002302 239.0
BYD3_k127_6229108_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000008716 151.0
BYD3_k127_6229108_4 AI-2E family transporter - - - 0.000000000000000000000000000000000004614 153.0
BYD3_k127_6229108_5 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.000000000000000000000007155 116.0
BYD3_k127_6229108_6 - - - - 0.0000000000000000000003986 106.0
BYD3_k127_6229440_0 Leucyl-tRNA synthetase, Domain 2 K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 3.547e-219 698.0
BYD3_k127_6239141_0 peroxiredoxin activity K03564 - 1.11.1.15 0.000000000000000000000000000000000000000002489 162.0
BYD3_k127_6239141_1 alcohol oxidase K00108 - 1.1.99.1 0.0000000006789 68.0
BYD3_k127_6258255_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004975 258.0
BYD3_k127_6258255_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000003275 196.0
BYD3_k127_6258255_2 Uracil-DNA glycosylase K21929 GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.000000000000000000000000000000000000000000000000002111 188.0
BYD3_k127_6258255_3 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000000000000000006105 142.0
BYD3_k127_6258255_4 tetratricopeptide repeat - - - 0.00014 53.0
BYD3_k127_6259829_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 6.385e-202 653.0
BYD3_k127_6259829_1 Domain of unknown function (DUF4178) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 468.0
BYD3_k127_6259829_2 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K00797,K01611 - 2.5.1.16,4.1.1.50 0.000000000000000000000000000000000002828 141.0
BYD3_k127_6259829_3 Endoribonuclease L-PSP K09022 GO:0003674,GO:0003824,GO:0016787,GO:0019239 3.5.99.10 0.000000000000000000000000000000000325 137.0
BYD3_k127_626389_0 enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000002406 229.0
BYD3_k127_626389_1 pathogenesis K02417,K02519 - - 0.00000003424 64.0
BYD3_k127_626389_2 formate dehydrogenase K03620 - - 0.00001324 51.0
BYD3_k127_6275370_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000193 289.0
BYD3_k127_6275370_1 Amidohydrolase family - - - 0.0000000000000000000000000000000001599 133.0
BYD3_k127_6277959_0 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 445.0
BYD3_k127_6277959_1 Modulates RecA activity K03565 - - 0.00000000004596 70.0
BYD3_k127_6277959_2 Domain of unknown function (DUF4388) - - - 0.0003873 51.0
BYD3_k127_6277959_3 PilZ domain - - - 0.0005168 51.0
BYD3_k127_6294859_0 Cytochrome C and Quinol oxidase polypeptide I K15408 - 1.9.3.1 0.0 1346.0
BYD3_k127_6294859_1 PFAM Alcohol dehydrogenase - - - 3.813e-214 668.0
BYD3_k127_6294859_2 Zinc-binding dehydrogenase K00008,K00148,K18369 - 1.1.1.14,1.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 587.0
BYD3_k127_6294859_3 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004877 440.0
BYD3_k127_6294859_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 407.0
BYD3_k127_6294859_5 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008379 340.0
BYD3_k127_6294859_6 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) K02351 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007471 258.0
BYD3_k127_6294859_7 - - - - 0.00000000000000000000000000000000000000000000004317 172.0
BYD3_k127_6294859_8 Phosphoribosyl transferase domain K07100 - - 0.00000000000861 66.0
BYD3_k127_6294859_9 Peptidase, M28 - - - 0.00005963 48.0
BYD3_k127_6295298_0 Proton-conducting membrane transporter K12137,K15828 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 9.754e-195 616.0
BYD3_k127_6295298_1 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 284.0
BYD3_k127_6296195_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 4.377e-252 786.0
BYD3_k127_6296195_1 Deoxyhypusine synthase K00809 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008612,GO:0009058,GO:0009987,GO:0010467,GO:0016740,GO:0016765,GO:0018193,GO:0018205,GO:0019538,GO:0034038,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 332.0
BYD3_k127_6296195_2 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000000004975 212.0
BYD3_k127_6296195_3 Peroxisomal sarcosine oxidase K00306 GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006084,GO:0006139,GO:0006163,GO:0006520,GO:0006553,GO:0006554,GO:0006605,GO:0006625,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008115,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009066,GO:0009068,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0015031,GO:0015833,GO:0016043,GO:0016054,GO:0016491,GO:0016645,GO:0016647,GO:0017144,GO:0019474,GO:0019477,GO:0019637,GO:0019693,GO:0019752,GO:0031907,GO:0031974,GO:0033036,GO:0033365,GO:0033514,GO:0033865,GO:0033875,GO:0034032,GO:0034613,GO:0034641,GO:0035383,GO:0042579,GO:0042737,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046395,GO:0046440,GO:0046483,GO:0046907,GO:0050031,GO:0051179,GO:0051186,GO:0051234,GO:0051641,GO:0051649,GO:0055086,GO:0055114,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072521,GO:0072594,GO:0072662,GO:0072663,GO:1901135,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.5.3.1,1.5.3.7 0.0000000000000000000000000000000000000000000000000000006358 209.0
BYD3_k127_6296195_4 membrane K07058 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000003482 61.0
BYD3_k127_6299884_0 Probable molybdopterin binding domain K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000002195 225.0
BYD3_k127_6299884_1 Belongs to the eIF-2B alpha beta delta subunits family K03680 - - 0.0000000000000000000000000000000000004274 151.0
BYD3_k127_6300677_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007054 316.0
BYD3_k127_6300677_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009184 307.0
BYD3_k127_6300736_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007997 284.0
BYD3_k127_6315355_0 AMP-binding enzyme C-terminal domain K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005691 501.0
BYD3_k127_6315374_0 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 359.0
BYD3_k127_6315374_1 BlaR1 peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 329.0
BYD3_k127_6315374_2 DNA-templated transcription, initiation - - - 0.000000000000000000000000000000000000000000000001334 181.0
BYD3_k127_6315374_3 Penicillinase repressor - - - 0.000000000000000000000000000000000000000000000005965 175.0
BYD3_k127_6315374_4 Haem-binding domain - - - 0.0000000000000000000000000000000000000001059 155.0
BYD3_k127_6315374_5 HEAT repeat - - - 0.0000000000000000000000000000001279 138.0
BYD3_k127_6317705_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 8.15e-321 994.0
BYD3_k127_6317705_1 Osmosensitive K channel His kinase sensor K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 483.0
BYD3_k127_6317705_2 protein histidine kinase activity K11383 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 423.0
BYD3_k127_6317705_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007841 291.0
BYD3_k127_6317705_4 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 - 3.6.3.12 0.00000000000000000000000000000000000000000000000000000000000000001032 229.0
BYD3_k127_6317705_5 Transcriptional regulatory protein, C terminal K07667 - - 0.0000000000000000000000000000000000000000000001283 173.0
BYD3_k127_632013_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 385.0
BYD3_k127_632013_1 Domain of unknown function (DUF3488) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 314.0
BYD3_k127_632013_2 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000709 235.0
BYD3_k127_632013_3 Putative cyclase K07130 - 3.5.1.9 0.000000000000000000000000000000000000000000000000000000005471 205.0
BYD3_k127_632013_4 PFAM KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.0000000000000000000000000009526 121.0
BYD3_k127_6320323_0 PFAM CobN Magnesium Chelatase K02230,K03403 - 6.6.1.1,6.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 554.0
BYD3_k127_6320323_1 PFAM CobN Magnesium Chelatase K02230,K03403 - 6.6.1.1,6.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 531.0
BYD3_k127_6320323_2 introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX K03404 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 408.0
BYD3_k127_6320323_3 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.000000000000000000000000000000000000000000000000000318 189.0
BYD3_k127_6321366_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000001737 228.0
BYD3_k127_6331262_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 1.73e-243 764.0
BYD3_k127_6331262_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 333.0
BYD3_k127_6331262_2 PFAM Phosphoribosyl transferase domain K07100 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006552 265.0
BYD3_k127_6331262_3 carboxymethylenebutenolidase activity K01061,K07100 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000001152 198.0
BYD3_k127_6331262_4 ribosomal large subunit export from nucleus - - - 0.0000000000000000000000000002204 121.0
BYD3_k127_6331262_5 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000668 76.0
BYD3_k127_6331262_6 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000006351 53.0
BYD3_k127_6336424_0 beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007202 520.0
BYD3_k127_63403_0 Pyridoxal-dependent decarboxylase conserved domain K01593,K01634 - 4.1.1.105,4.1.1.28,4.1.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 557.0
BYD3_k127_63403_1 neurotransmitter:sodium symporter activity K03308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 518.0
BYD3_k127_63403_2 C-terminus of AA_permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004402 445.0
BYD3_k127_63403_3 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11779,K11784 - 1.21.98.1,2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062 372.0
BYD3_k127_63403_5 Universal stress protein family - - - 0.00000000000000000000000000000001571 138.0
BYD3_k127_6340386_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 4.609e-207 653.0
BYD3_k127_6340386_1 Cation transport protein K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007712 363.0
BYD3_k127_6340386_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 289.0
BYD3_k127_6340386_3 PFAM TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000005417 186.0
BYD3_k127_6349385_0 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000003536 158.0
BYD3_k127_6349385_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000006033 97.0
BYD3_k127_6349385_2 self proteolysis - - - 0.000000000000000345 86.0
BYD3_k127_6353422_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006963 479.0
BYD3_k127_6353422_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 346.0
BYD3_k127_6353422_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000001267 181.0
BYD3_k127_6353422_3 palmitoyl-(protein) hydrolase activity K06999 - - 0.000000000000000000000000001718 120.0
BYD3_k127_6353422_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000003855 105.0
BYD3_k127_635897_0 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005818 319.0
BYD3_k127_635897_1 HypF finger K04656 - - 0.0000000000005222 69.0
BYD3_k127_635897_2 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000007796 57.0
BYD3_k127_6388496_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 421.0
BYD3_k127_6388496_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 347.0
BYD3_k127_6388496_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004243 278.0
BYD3_k127_6388496_3 PFAM response regulator receiver K02483,K07658,K07668 - - 0.000000000000000000000000000000000000000000000000000000000000000004195 234.0
BYD3_k127_6388496_4 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000538 177.0
BYD3_k127_6391929_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 379.0
BYD3_k127_6391929_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 346.0
BYD3_k127_6391929_10 Metallo-peptidase family M12 - - - 0.00000000000000000121 91.0
BYD3_k127_6391929_11 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000002306 66.0
BYD3_k127_6391929_12 PFAM von Willebrand factor type A - - - 0.00004016 55.0
BYD3_k127_6391929_13 FG-GAP repeat - - - 0.0005654 52.0
BYD3_k127_6391929_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 316.0
BYD3_k127_6391929_3 Lycopene cyclase protein K10960,K21401 - 1.3.1.111,1.3.1.83,1.3.99.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 320.0
BYD3_k127_6391929_4 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000003044 216.0
BYD3_k127_6391929_5 Sulfatase K01133 - 3.1.6.6 0.00000000000000000000000000000000000000000005262 183.0
BYD3_k127_6391929_6 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000005498 130.0
BYD3_k127_6391929_7 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000000000000000004012 125.0
BYD3_k127_6391929_8 - - - - 0.000000000000000000000000005466 117.0
BYD3_k127_6391929_9 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000005262 112.0
BYD3_k127_6392837_0 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075,K15780 - 2.4.2.8,6.3.4.19 0.00000000000000000000000000000000000000000000000000000004948 215.0
BYD3_k127_6392837_1 PFAM peptidase M15B and M15C DD-carboxypeptidase VanY endolysin - - - 0.00000000000000000000000000001073 130.0
BYD3_k127_6395294_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000006545 216.0
BYD3_k127_6401383_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007664 451.0
BYD3_k127_6401383_1 lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008698 302.0
BYD3_k127_6401383_2 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002603 281.0
BYD3_k127_6401383_3 SMART phosphoesterase PHP domain protein K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002887 276.0
BYD3_k127_6401383_4 ErfK YbiS YcfS YnhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005379 253.0
BYD3_k127_6401383_5 Mannose-6-phosphate isomerase K01809 - 5.3.1.8 0.000000000000000000000000000000000000000006134 158.0
BYD3_k127_6403297_0 Male sterility protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 504.0
BYD3_k127_6403297_1 Glycosyl transferase 4-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000204 297.0
BYD3_k127_6403297_2 Lamin Tail Domain K07004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002496 253.0
BYD3_k127_6403297_3 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000004593 253.0
BYD3_k127_640482_0 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004573 320.0
BYD3_k127_640482_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 304.0
BYD3_k127_640482_2 PFAM Branched-chain amino acid transport system permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 299.0
BYD3_k127_640482_3 Cytidine monophosphokinase K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000005877 261.0
BYD3_k127_640482_4 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.00000000000000000000000000000000000000000000516 167.0
BYD3_k127_6404865_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000003911 80.0
BYD3_k127_6405994_0 MFS/sugar transport protein K16211 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 547.0
BYD3_k127_6405994_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 475.0
BYD3_k127_6405994_2 Glycogen debranching enzyme, glucanotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 356.0
BYD3_k127_6405994_3 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 307.0
BYD3_k127_6406002_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 407.0
BYD3_k127_6406002_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000007846 207.0
BYD3_k127_6406002_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000001559 189.0
BYD3_k127_6406002_3 Cysteine-rich secretory protein family - - - 0.000000000000000000000000005609 117.0
BYD3_k127_6406002_4 Cysteine-rich secretory protein family - - - 0.000000000000000000000003413 111.0
BYD3_k127_6407984_0 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 440.0
BYD3_k127_6412915_0 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 390.0
BYD3_k127_6430272_0 DNA replication proofreading K02336,K06877 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009219 438.0
BYD3_k127_6430272_1 - - - - 0.0000000000000166 76.0
BYD3_k127_6433902_0 Zinc carboxypeptidase - - - 0.0 1102.0
BYD3_k127_6433902_1 Dienelactone hydrolase family - - - 1.487e-269 844.0
BYD3_k127_6433902_2 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 287.0
BYD3_k127_6444219_0 serine-type peptidase activity K01303 - 3.4.19.1 1.05e-210 666.0
BYD3_k127_6444255_0 Cytochrome c - - - 6.954e-232 739.0
BYD3_k127_6444255_1 Polysaccharide lyase family 4, domain II - - - 0.0000000000000000000000000000000000000000000000000000000000007675 220.0
BYD3_k127_6444255_2 heme a metabolic process K02259,K03110 - - 0.000000000000000000000000000000000000002875 159.0
BYD3_k127_6444255_3 Protoheme IX farnesyltransferase K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.0003014 47.0
BYD3_k127_6452385_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007807 436.0
BYD3_k127_6452385_1 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000001421 263.0
BYD3_k127_6452385_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000003449 225.0
BYD3_k127_6452385_3 Amidohydrolase K07045 - - 0.0000000000000001093 88.0
BYD3_k127_6452385_4 Domain of unknown function (DUF1844) - - - 0.000000003071 65.0
BYD3_k127_646960_0 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 578.0
BYD3_k127_646960_1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 504.0
BYD3_k127_646960_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 501.0
BYD3_k127_646960_3 - K00262 - 1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009138 471.0
BYD3_k127_646960_4 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000001831 168.0
BYD3_k127_646960_5 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.00000000000000000000000002767 108.0
BYD3_k127_646960_6 GtrA-like protein - - - 0.00000000000000000002375 99.0
BYD3_k127_6471262_0 ATPase involved in DNA repair - - - 1.924e-270 867.0
BYD3_k127_6471262_1 ribosome binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 542.0
BYD3_k127_6471964_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 367.0
BYD3_k127_6471964_1 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000008088 180.0
BYD3_k127_6471964_2 - - - - 0.0000000000000000000001677 104.0
BYD3_k127_6473268_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 1.201e-201 643.0
BYD3_k127_6473268_1 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000000000000000001877 248.0
BYD3_k127_6473268_2 BMC - - - 0.0000000000000000000000000000000004524 132.0
BYD3_k127_6473268_3 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028,K08697 - - 0.000000000000000000000000003337 112.0
BYD3_k127_6479197_0 PFAM magnesium chelatase K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 451.0
BYD3_k127_6479197_1 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000003892 241.0
BYD3_k127_6479197_2 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000001872 138.0
BYD3_k127_6479197_3 Hep Hag repeat protein K21449 - - 0.0000000000000000000004413 111.0
BYD3_k127_6484976_0 Amino acid permease - - - 3.958e-248 788.0
BYD3_k127_6484976_1 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008498 297.0
BYD3_k127_6484976_2 AIR carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003867 291.0
BYD3_k127_6484976_3 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000003627 146.0
BYD3_k127_6484976_4 CBS domain - - - 0.0000000004175 64.0
BYD3_k127_6492662_0 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000003416 253.0
BYD3_k127_6492662_1 - - - - 0.0000000000000003027 84.0
BYD3_k127_6496074_0 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 539.0
BYD3_k127_6502715_0 asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000002207 265.0
BYD3_k127_6502715_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000001193 203.0
BYD3_k127_6502715_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) - - - 0.00000000000000000000000000000000000000000000006028 187.0
BYD3_k127_6502715_3 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) - - - 0.0000000000000000000000000000003648 139.0
BYD3_k127_6502715_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000004555 136.0
BYD3_k127_6502715_5 Glycosyltransferase like family 2 - - - 0.0000000005472 70.0
BYD3_k127_6503450_0 ASPIC and UnbV - - - 1.886e-210 665.0
BYD3_k127_6503450_1 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 0.0000000000000000000000000000000000000006566 157.0
BYD3_k127_6512022_0 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 332.0
BYD3_k127_6512022_1 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.000000000000000000000001474 119.0
BYD3_k127_6512022_2 Putative modulator of DNA gyrase - - - 0.000000000008635 67.0
BYD3_k127_653052_0 cytochrome p450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 444.0
BYD3_k127_653052_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 364.0
BYD3_k127_653052_2 COGs COG4299 conserved - - - 0.0000000000000000000000000000000000000000000000001463 182.0
BYD3_k127_653052_3 Recombinase zinc beta ribbon domain - - - 0.0002699 44.0
BYD3_k127_6538938_0 Prolyl oligopeptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009546 405.0
BYD3_k127_6538938_1 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009569 276.0
BYD3_k127_6553227_0 phage tail tape measure protein - - - 7.995e-253 829.0
BYD3_k127_6553258_0 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008057 427.0
BYD3_k127_6553258_1 Penicillin amidase K01434 - 3.5.1.11 0.000006755 55.0
BYD3_k127_6553258_2 TIGRFAM DNA protecting protein DprA K04096 - - 0.00005495 48.0
BYD3_k127_6554968_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 595.0
BYD3_k127_6554968_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 457.0
BYD3_k127_6554968_2 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004068 342.0
BYD3_k127_6554968_3 Alternative locus ID - - - 0.00000000000000000000000000000000000000000000000000002043 199.0
BYD3_k127_6554968_4 DNA-templated transcription, initiation K02405 - - 0.0000000000000000000000000000000000000000000000000001931 191.0
BYD3_k127_6554968_5 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000001994 137.0
BYD3_k127_6554968_6 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000001395 101.0
BYD3_k127_6554968_7 cAMP biosynthetic process - - - 0.000000000121 64.0
BYD3_k127_6564705_0 Peptidase family S58 K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 509.0
BYD3_k127_6564705_1 Vault protein inter-alpha-trypsin domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 378.0
BYD3_k127_6564705_2 bacterial-type flagellum-dependent cell motility - - - 0.00000000000000000004994 92.0
BYD3_k127_6564705_3 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000003784 103.0
BYD3_k127_6564705_4 Protein of unknown function (DUF3592) - - - 0.00000000001349 73.0
BYD3_k127_6573498_0 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 389.0
BYD3_k127_6573498_1 Aminotransferase class I and II K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 312.0
BYD3_k127_6573498_2 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000009806 220.0
BYD3_k127_6573498_3 Belongs to the alpha-IPM synthase homocitrate synthase family K10977 - 2.3.3.14 0.00000000000000000000000001935 113.0
BYD3_k127_6577512_0 Phosphate acyltransferases K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 586.0
BYD3_k127_6577512_1 Belongs to the ompA family - - - 0.00000008343 59.0
BYD3_k127_6582632_0 Chaperone - - - 0.0000000000000000002742 98.0
BYD3_k127_6582632_1 cellulase activity - - - 0.000000003553 70.0
BYD3_k127_6590003_0 Belongs to the carbamoyltransferase HypF family K04656 - - 6.214e-254 803.0
BYD3_k127_6590003_1 hydrogenase expression formation protein HypD K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000189 256.0
BYD3_k127_6590003_2 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000003716 234.0
BYD3_k127_6590003_3 HupF/HypC family K04653 - - 0.00000000000000000000000604 105.0
BYD3_k127_6595620_0 collagen metabolic process K08677 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 366.0
BYD3_k127_6595620_1 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008885 248.0
BYD3_k127_6595620_2 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 0.000000000000000000000003225 102.0
BYD3_k127_6597511_0 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005925 458.0
BYD3_k127_6621052_0 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 0.000000000000000000000000000000000000003553 149.0
BYD3_k127_6621052_1 bacterial (prokaryotic) histone like domain K03530 - - 0.00000000000000000000000000000000002883 136.0
BYD3_k127_6621052_2 glycosyl transferase family - - - 0.000000000000005707 88.0
BYD3_k127_6621052_3 Peptidase M50 - - - 0.000683 47.0
BYD3_k127_6627316_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000006542 230.0
BYD3_k127_6627316_1 Tetratricopeptide repeats - - - 0.0000000000000000005528 102.0
BYD3_k127_6627316_2 pathogenesis - - - 0.0003156 53.0
BYD3_k127_6632998_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000001979 222.0
BYD3_k127_6632998_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000000000894 205.0
BYD3_k127_6637739_0 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007098 545.0
BYD3_k127_6637739_1 FRG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 358.0
BYD3_k127_6637739_2 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004762 289.0
BYD3_k127_6637739_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004763 280.0
BYD3_k127_6637739_4 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000007704 242.0
BYD3_k127_6637739_5 Aerotolerance regulator N-terminal - - - 0.0000006073 56.0
BYD3_k127_6645488_0 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0000000000000000000000000000000000000000000000001047 186.0
BYD3_k127_6645488_1 GMC oxidoreductase - - - 0.000000000000004249 87.0
BYD3_k127_6645488_2 Haem-degrading - - - 0.000000007697 63.0
BYD3_k127_6651439_0 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000004863 197.0
BYD3_k127_6651439_1 methyltransferase activity - - - 0.00000003289 55.0
BYD3_k127_6671551_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 346.0
BYD3_k127_6671551_1 Histidine kinase K02668,K07708 - 2.7.13.3 0.0000000000000000000000000000000004702 148.0
BYD3_k127_6671551_2 - - - - 0.0000000000000000000004776 100.0
BYD3_k127_6677044_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003611 325.0
BYD3_k127_6677044_1 PFAM Glycosyl transferase family 2 K16557 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000001216 267.0
BYD3_k127_6677044_2 Bacterial sugar transferase - - - 0.00000000000000000000004873 111.0
BYD3_k127_6679274_0 PFAM oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 567.0
BYD3_k127_6679274_1 dehydrogenases and related proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005776 526.0
BYD3_k127_6679274_10 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000004137 246.0
BYD3_k127_6679274_11 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000006701 173.0
BYD3_k127_6679274_12 thiolester hydrolase activity K06889 - - 0.0000000000000000000000000000000000000000001145 172.0
BYD3_k127_6679274_13 - - - - 0.00000000000000000000000000000000001209 136.0
BYD3_k127_6679274_14 Belongs to the enoyl-CoA hydratase isomerase family K01692,K13238 - 4.2.1.17,5.3.3.8 0.00000000000000000000000000000000001346 145.0
BYD3_k127_6679274_15 Phosphotransferase enzyme family - - - 0.000000000000000007109 91.0
BYD3_k127_6679274_16 periplasmic or secreted lipoprotein - - - 0.00000000003518 73.0
BYD3_k127_6679274_2 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005744 441.0
BYD3_k127_6679274_3 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 424.0
BYD3_k127_6679274_4 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 390.0
BYD3_k127_6679274_5 Class II aldolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 374.0
BYD3_k127_6679274_6 myo-inosose-2 dehydratase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000082 362.0
BYD3_k127_6679274_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 355.0
BYD3_k127_6679274_8 Short-chain dehydrogenase reductase sdr K00046 - 1.1.1.69 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 331.0
BYD3_k127_6679274_9 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 317.0
BYD3_k127_6681114_0 efflux transmembrane transporter activity - - - 1.587e-216 698.0
BYD3_k127_6681114_1 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 395.0
BYD3_k127_6681114_2 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 372.0
BYD3_k127_6681114_3 transcription factor binding K02584,K11914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006856 328.0
BYD3_k127_6681114_5 L-seryl-tRNASec selenium transferase activity K01042 - 2.9.1.1 0.000000000000001515 87.0
BYD3_k127_6687398_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 393.0
BYD3_k127_6687398_1 phosphorelay signal transduction system K02488,K04757 - 2.7.11.1,2.7.7.65 0.0000000000000000000001484 106.0
BYD3_k127_6687398_2 - - - - 0.000000000005262 75.0
BYD3_k127_6696166_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004175 319.0
BYD3_k127_6696166_1 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000007057 229.0
BYD3_k127_6705609_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 1.57e-213 672.0
BYD3_k127_6705609_1 succinyl-diaminopimelate desuccinylase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004051 455.0
BYD3_k127_6705609_2 tail specific protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009955 342.0
BYD3_k127_6717318_0 peptidase S9B dipeptidylpeptidase IV domain protein K01278 - 3.4.14.5 6.217e-206 664.0
BYD3_k127_6717318_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009999 494.0
BYD3_k127_6719809_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009158 367.0
BYD3_k127_6719809_1 Belongs to the K00958,K13811 - 2.7.1.25,2.7.7.4 0.0000000000005005 71.0
BYD3_k127_6724305_0 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 342.0
BYD3_k127_6724305_1 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000006383 113.0
BYD3_k127_6724305_2 Membrane - - - 0.000000807 61.0
BYD3_k127_6736214_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 443.0
BYD3_k127_6736214_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 309.0
BYD3_k127_6741344_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0 1203.0
BYD3_k127_6741344_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960,K20810 - 3.5.4.28,3.5.4.31,3.5.4.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 355.0
BYD3_k127_6741344_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 301.0
BYD3_k127_6741344_3 WD40 repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000047 274.0
BYD3_k127_6741344_4 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000002589 117.0
BYD3_k127_6747311_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 - 3.6.3.12 1.788e-248 779.0
BYD3_k127_6768914_0 belongs to the sigma-70 factor family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 397.0
BYD3_k127_6768914_1 YCII-related domain - - - 0.0000000000000000000003512 100.0
BYD3_k127_6773949_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0 1037.0
BYD3_k127_6773949_1 Protein of unknown function (DUF3089) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 453.0
BYD3_k127_6773949_2 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 334.0
BYD3_k127_6773949_3 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000001057 231.0
BYD3_k127_6773949_4 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000002045 173.0
BYD3_k127_6779669_0 proline dipeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 507.0
BYD3_k127_678064_0 Homoserine dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 375.0
BYD3_k127_678064_1 Major facilitator superfamily - - - 0.000000000009293 74.0
BYD3_k127_6787176_0 Associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 396.0
BYD3_k127_6787176_1 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005804 252.0
BYD3_k127_6787176_2 protein (some members contain a von Willebrand factor type A (vWA) domain - - - 0.00000000000000000000000000000001607 130.0
BYD3_k127_6787176_3 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.00000000000000000000001482 113.0
BYD3_k127_6787176_4 DinB superfamily - - - 0.00000000000000009558 87.0
BYD3_k127_6787176_5 DNA recombination - - - 0.0008613 52.0
BYD3_k127_681785_0 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 455.0
BYD3_k127_681785_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007035 432.0
BYD3_k127_681785_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000943 283.0
BYD3_k127_681785_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000005823 88.0
BYD3_k127_681785_4 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic - - - 0.0005617 48.0
BYD3_k127_6827215_0 Subtilase family K17734 - - 0.000000000000000000000000000000000000000000000002022 184.0
BYD3_k127_6835672_0 PFAM acyl-CoA dehydrogenase domain protein K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 368.0
BYD3_k127_6835672_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006797 356.0
BYD3_k127_6835672_2 ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000807 231.0
BYD3_k127_6835672_3 PFAM CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000006024 189.0
BYD3_k127_6835672_4 phosphorelay signal transduction system - - - 0.0000000000000001633 85.0
BYD3_k127_6840283_0 cellulose binding - - - 0.0 1030.0
BYD3_k127_6844601_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 457.0
BYD3_k127_6844601_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 394.0
BYD3_k127_6844601_2 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000132 219.0
BYD3_k127_6844601_3 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000000000000000000000000000000000008175 212.0
BYD3_k127_6844601_4 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.00000000000000000000000000000000000000000000000004798 186.0
BYD3_k127_6844601_5 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000007675 54.0
BYD3_k127_6848760_0 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000553 219.0
BYD3_k127_6848760_1 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000002444 173.0
BYD3_k127_685055_0 Kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000003114 172.0
BYD3_k127_685055_1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000009583 61.0
BYD3_k127_6851972_0 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.000000000000000000000000000000000008987 143.0
BYD3_k127_6851972_1 GMC oxidoreductase - - - 0.00000000000000000000006232 111.0
BYD3_k127_6851972_2 PFAM Prolyl oligopeptidase family - - - 0.0002307 53.0
BYD3_k127_6851972_3 PFAM Prolyl oligopeptidase family - - - 0.0009289 51.0
BYD3_k127_6864220_0 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002386 255.0
BYD3_k127_6864220_1 PFAM Tetratricopeptide repeat - - - 0.0001109 46.0
BYD3_k127_6866654_0 beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006931 346.0
BYD3_k127_6866654_1 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006707 280.0
BYD3_k127_6866654_2 Belongs to the UPF0502 family K09915 - - 0.0000000000000000000000000000000000000000000000000000000000000000289 229.0
BYD3_k127_6866654_3 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000458 127.0
BYD3_k127_6866654_4 - - - - 0.000000000000000000000000004146 117.0
BYD3_k127_687599_0 acetaldehyde dehydrogenase (acetylating) K00132,K13922,K15515,K18119 - 1.2.1.10,1.2.1.76,1.2.1.81,1.2.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 327.0
BYD3_k127_687599_1 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002265 287.0
BYD3_k127_687599_2 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007961 261.0
BYD3_k127_687599_3 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000001451 184.0
BYD3_k127_687599_4 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000001284 152.0
BYD3_k127_6878674_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008329 541.0
BYD3_k127_6878674_1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002239 235.0
BYD3_k127_6878674_2 Thioesterase domain - - - 0.00000000000000000000000000000000000000000000000000000000000005548 223.0
BYD3_k127_6878674_3 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000000000000000000000000000275 213.0
BYD3_k127_6878674_4 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000001983 155.0
BYD3_k127_6878674_5 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.00000000000000000001107 100.0
BYD3_k127_6878674_6 AAA domain K02282 - - 0.00001815 49.0
BYD3_k127_6900309_0 involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 371.0
BYD3_k127_6900309_1 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000005277 194.0
BYD3_k127_6900309_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000004794 94.0
BYD3_k127_690133_0 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 2.077e-218 694.0
BYD3_k127_690133_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 481.0
BYD3_k127_690133_2 Phosphoglycerate kinase K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 397.0
BYD3_k127_690133_3 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.000003636 59.0
BYD3_k127_690133_4 transcriptional regulator, SARP family - - - 0.0000121 57.0
BYD3_k127_6901867_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1176.0
BYD3_k127_6901867_1 PFAM NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 320.0
BYD3_k127_6901867_2 PFAM phospholipase Carboxylesterase - - - 0.0000000000000000000000000000000000000000000000000000000002864 211.0
BYD3_k127_6901867_3 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000000000000003938 106.0
BYD3_k127_6901867_4 Concanavalin A-like lectin/glucanases superfamily - - - 0.000000000000000007596 94.0
BYD3_k127_6901867_5 cAMP biosynthetic process - - - 0.0000000000000009716 85.0
BYD3_k127_6901867_6 DDE superfamily endonuclease - - - 0.0000000000001393 75.0
BYD3_k127_6901867_7 Adenylate cyclase - - - 0.00001795 48.0
BYD3_k127_6904227_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 499.0
BYD3_k127_6908552_0 Binding-protein-dependent transport system inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 405.0
BYD3_k127_6908552_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 402.0
BYD3_k127_6908552_2 COG0226 ABC-type phosphate transport system periplasmic K02040 - - 0.000000000000000000000000000000000000000000008458 165.0
BYD3_k127_6908552_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000003625 96.0
BYD3_k127_6909043_0 Protoporphyrinogen oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008879 249.0
BYD3_k127_6909043_1 methyltransferase K05928 - 2.1.1.95 0.00000000000000000000000000000000000000000001872 171.0
BYD3_k127_6911908_0 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000321 93.0
BYD3_k127_6916314_0 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008472 417.0
BYD3_k127_6916314_1 Thioesterase-like superfamily - - - 0.00000000000000000000000000000001203 131.0
BYD3_k127_691743_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002151 273.0
BYD3_k127_691743_1 ATP-independent chaperone mediated protein folding - - - 0.00000000000000000000000000000000000001352 151.0
BYD3_k127_691743_2 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000002298 158.0
BYD3_k127_691743_3 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000002238 51.0
BYD3_k127_6919865_0 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 512.0
BYD3_k127_6919865_1 histone H2A K63-linked ubiquitination K03220 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 485.0
BYD3_k127_6919865_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 312.0
BYD3_k127_6919865_3 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 303.0
BYD3_k127_6919865_4 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001332 274.0
BYD3_k127_6919865_5 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005542 278.0
BYD3_k127_6919865_6 C-terminal domain of CHU protein family - - - 0.000003036 59.0
BYD3_k127_6921302_0 Phosphotriesterase K07048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 560.0
BYD3_k127_6921302_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000542 314.0
BYD3_k127_6922034_0 peptidase S9 prolyl oligopeptidase active site K01303 - 3.4.19.1 2e-323 1000.0
BYD3_k127_6922034_1 Phage integrase, N-terminal SAM-like domain K03733,K04763 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 295.0
BYD3_k127_6928397_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006142 603.0
BYD3_k127_6928397_1 nodulation K00612 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 512.0
BYD3_k127_6928397_2 Polysaccharide biosynthesis protein K17947 - 5.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 443.0
BYD3_k127_6928397_3 methyltransferase activity K00574,K12240,K18534,K19620,K20444 - 2.1.1.295,2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 321.0
BYD3_k127_6928397_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001551 266.0
BYD3_k127_6928397_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000005704 198.0
BYD3_k127_6928397_6 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000008566 83.0
BYD3_k127_692919_0 PFAM Glycosyl hydrolases family 31 K01187 - 3.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000852 428.0
BYD3_k127_6935732_0 serine-type peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004924 421.0
BYD3_k127_6950598_0 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 427.0
BYD3_k127_6950598_1 Sodium:sulfate symporter transmembrane region - - - 0.000000000000000000117 88.0
BYD3_k127_695688_0 Elongation factor G, domain IV K02355 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 338.0
BYD3_k127_695688_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 296.0
BYD3_k127_695688_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 293.0
BYD3_k127_6961723_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 397.0
BYD3_k127_6961723_1 - - - - 0.000000000000000000000000000000006962 140.0
BYD3_k127_6962572_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00002653 56.0
BYD3_k127_6964133_0 ergosterol biosynthetic process K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000007094 259.0
BYD3_k127_6964133_1 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000002911 255.0
BYD3_k127_6964133_2 CarD-like/TRCF domain K07736 - - 0.000000000000000000000004617 107.0
BYD3_k127_6964133_3 Flavin containing amine oxidoreductase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000006098 102.0
BYD3_k127_6966467_0 Glycosyl hydrolase family 57 K16149 - 2.4.1.18 5.072e-211 667.0
BYD3_k127_6966467_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000006091 193.0
BYD3_k127_6966467_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000001102 163.0
BYD3_k127_6966467_3 Domain of unknown function (DUF4252) - - - 0.00000000000000000000000000000000003309 141.0
BYD3_k127_6966467_4 positive regulation of translation, ncRNA-mediated K03666 GO:0003674,GO:0003676,GO:0003677,GO:0003681,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016246,GO:0016441,GO:0016458,GO:0017148,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030423,GO:0031047,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032268,GO:0032269,GO:0032270,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0035194,GO:0040029,GO:0040033,GO:0043170,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045974,GO:0045975,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:2000112,GO:2000113 - 0.0000000000000000000000801 101.0
BYD3_k127_6966467_5 ATPase activity K02045 - 3.6.3.25 0.0000000000008464 74.0
BYD3_k127_6966467_6 - - - - 0.00000000004156 71.0
BYD3_k127_6966467_7 Domain of unknown function (DUF4912) K09942 - - 0.0001392 53.0
BYD3_k127_6972608_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 2.256e-276 857.0
BYD3_k127_6972608_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 395.0
BYD3_k127_6972608_2 signal sequence binding K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 314.0
BYD3_k127_6972608_3 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001111 261.0
BYD3_k127_6972608_4 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000009191 240.0
BYD3_k127_6972608_5 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000138 201.0
BYD3_k127_6972608_6 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.00000000000000000000004315 101.0
BYD3_k127_6972608_7 - - - - 0.0000004134 59.0
BYD3_k127_6976574_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 518.0
BYD3_k127_6976574_1 SMART Tetratricopeptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 481.0
BYD3_k127_6977280_0 class II (D K K01893 - 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 600.0
BYD3_k127_6977280_1 RQC K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 497.0
BYD3_k127_6977280_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 433.0
BYD3_k127_6977280_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 407.0
BYD3_k127_6977280_4 aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 383.0
BYD3_k127_6977280_5 Arginase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 364.0
BYD3_k127_6977280_6 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000003608 203.0
BYD3_k127_6977280_7 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.000000000000000000000000000000004636 131.0
BYD3_k127_6997807_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 588.0
BYD3_k127_6997807_1 Trypsin K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000587 301.0
BYD3_k127_6997807_2 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000001973 211.0
BYD3_k127_700380_0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000005184 202.0
BYD3_k127_700380_1 response regulator receiver - - - 0.0000000000000000000000000000000000000000000004869 187.0
BYD3_k127_700918_0 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 351.0
BYD3_k127_700918_1 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000004473 239.0
BYD3_k127_700918_2 Sigma-54 interaction domain K02481 - - 0.00000000000000000000000000000000000000000001415 168.0
BYD3_k127_700918_3 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000006305 147.0
BYD3_k127_700918_4 Outer membrane lipoprotein - - - 0.00000000000000000000000001875 119.0
BYD3_k127_7009426_0 PhoQ Sensor - - - 0.000000000000000000000000000000000000007619 168.0
BYD3_k127_701437_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0 1240.0
BYD3_k127_701437_1 peroxiredoxin activity - - - 7.007e-298 924.0
BYD3_k127_701437_2 electron transport chain K00347,K03614,K21163 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009787 370.0
BYD3_k127_701437_3 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000007834 168.0
BYD3_k127_701437_4 - - - - 0.00000000000000000000000000000000000000005843 154.0
BYD3_k127_701437_5 hydroperoxide reductase activity K01607 - 4.1.1.44 0.000000000000000000000000000000006455 129.0
BYD3_k127_701437_7 pfam yhs - - - 0.0000000003406 62.0
BYD3_k127_701437_8 protein kinase activity - - - 0.00000009073 61.0
BYD3_k127_701437_9 Peptidase dimerisation domain K12941 - - 0.00003284 48.0
BYD3_k127_7017489_0 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000001132 193.0
BYD3_k127_7017489_1 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000001954 66.0
BYD3_k127_7020616_0 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000008758 192.0
BYD3_k127_702319_0 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035870,GO:0036220,GO:0036222,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046983,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000002839 183.0
BYD3_k127_702319_1 Carboxypeptidase regulatory-like domain - - - 0.0000002066 64.0
BYD3_k127_7030316_0 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000003163 260.0
BYD3_k127_7030316_1 Sigma-54 interaction domain K07714 - - 0.0000000000000000000000000000000000000001559 154.0
BYD3_k127_7033043_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 549.0
BYD3_k127_7033043_1 PFAM glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000004815 262.0
BYD3_k127_7033043_2 RmlD substrate binding domain - - - 0.0001409 46.0
BYD3_k127_7037629_0 Two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 352.0
BYD3_k127_7038436_0 peptidyl-tyrosine sulfation - - - 0.00000005759 63.0
BYD3_k127_7047174_0 Bacterial extracellular solute-binding protein K02048 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 384.0
BYD3_k127_7047174_1 ATPase activity K02045 - 3.6.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 295.0
BYD3_k127_7047174_2 TIGRFAM sulfate ABC transporter K02046 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001105 272.0
BYD3_k127_7047174_3 Transcriptional regulator - - - 0.000000000000000000000000000000003941 133.0
BYD3_k127_7051501_0 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 302.0
BYD3_k127_7051501_1 Alpha/beta hydrolase family K06889 - - 0.0000004771 55.0
BYD3_k127_7060852_0 Polysulphide reductase, NrfD K00185 - - 3.965e-215 677.0
BYD3_k127_7060852_1 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 551.0
BYD3_k127_7060852_2 Major Facilitator Superfamily K02575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 412.0
BYD3_k127_7060852_3 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 326.0
BYD3_k127_7060852_4 cytochrome c - - - 0.000000000000000000000000000000000000000000000006669 177.0
BYD3_k127_7060852_5 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000009906 168.0
BYD3_k127_7065180_0 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000001314 135.0
BYD3_k127_7065180_1 transcriptional regulator containing an HTH domain and an K03655 - 3.6.4.12 0.0000000000000000000000001616 113.0
BYD3_k127_7070874_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 423.0
BYD3_k127_7070874_2 Domain of unknown function (DUF4126) - - - 0.0000000000000000003432 89.0
BYD3_k127_7071868_0 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 320.0
BYD3_k127_7071868_1 FemAB family - - - 0.00000007545 65.0
BYD3_k127_7080603_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005443 416.0
BYD3_k127_7080603_1 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000003246 253.0
BYD3_k127_7080603_2 aminopeptidase activity - - - 0.00000000003497 67.0
BYD3_k127_7085366_0 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000003374 146.0
BYD3_k127_7100254_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 463.0
BYD3_k127_7105744_0 cytochrome c peroxidase K00428 - 1.11.1.5 4.006e-237 760.0
BYD3_k127_7105744_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 546.0
BYD3_k127_7105744_2 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004648 283.0
BYD3_k127_7105744_3 Major intrinsic protein K02440 - - 0.000000000000000000000000000000000000000000000000000000001613 211.0
BYD3_k127_7105744_4 Domain of unknown function (DUF4081) K06976 - - 0.0000000000000000000008936 106.0
BYD3_k127_7110728_0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 391.0
BYD3_k127_7110728_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009784 278.0
BYD3_k127_7110728_2 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000794 229.0
BYD3_k127_7132199_0 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 549.0
BYD3_k127_7132199_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000002861 216.0
BYD3_k127_7132199_2 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000000000000000000000000000000000000000002444 213.0
BYD3_k127_7132199_3 DUF167 K09131 - - 0.0000000000000000000005678 98.0
BYD3_k127_7132199_4 YGGT family K02221 - - 0.00001416 54.0
BYD3_k127_7132554_0 Belongs to the GPI family K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033554,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042802,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0070887,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 1.076e-292 906.0
BYD3_k127_7132554_1 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000008284 183.0
BYD3_k127_7132554_2 Protein of unknown function (DUF983) - - - 0.0000000000000000305 86.0
BYD3_k127_7140903_0 TIGRFAM RHS repeat-associated core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 560.0
BYD3_k127_7140903_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 456.0
BYD3_k127_7140903_10 Helix-turn-helix domain - - - 0.0008791 47.0
BYD3_k127_7140903_2 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001532 267.0
BYD3_k127_7140903_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000003165 236.0
BYD3_k127_7140903_4 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000000000007495 182.0
BYD3_k127_7140903_5 Belongs to the TPP enzyme family K01637 - 4.1.3.1 0.000000000000000000000000000000002075 145.0
BYD3_k127_7140903_6 Adenylate cyclase - - - 0.000000000000000000000000000001392 136.0
BYD3_k127_7140903_7 phosphocarrier protein HPr K11189 - - 0.00000000000000004227 84.0
BYD3_k127_7140903_8 Protein of unknown function (DUF433) - - - 0.0000002514 55.0
BYD3_k127_7142006_0 Protein of unknown function (DUF979) - - - 0.000000000000000000000000000000000000000000003177 169.0
BYD3_k127_7142006_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000004201 123.0
BYD3_k127_7142006_2 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000001556 113.0
BYD3_k127_7145675_0 enterobactin catabolic process K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006228 272.0
BYD3_k127_7145675_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000003542 223.0
BYD3_k127_7145675_2 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III C terminal K01641 - 2.3.3.10 0.000000000000000000000000000000000001138 141.0
BYD3_k127_7154443_0 arylsulfatase A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 296.0
BYD3_k127_7154443_1 arylsulfatase A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001358 251.0
BYD3_k127_7154464_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 518.0
BYD3_k127_7155310_0 positive regulation of MDA-5 signaling pathway K16726 GO:0000785,GO:0001568,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0001817,GO:0001819,GO:0001944,GO:0001955,GO:0002376,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002831,GO:0002833,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005694,GO:0005737,GO:0006275,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007005,GO:0007010,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007346,GO:0007399,GO:0007423,GO:0007492,GO:0008150,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009887,GO:0009888,GO:0009889,GO:0009892,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010506,GO:0010507,GO:0010556,GO:0010564,GO:0010639,GO:0010646,GO:0010647,GO:0010821,GO:0010823,GO:0010927,GO:0010941,GO:0012505,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0019730,GO:0019899,GO:0019900,GO:0019901,GO:0021700,GO:0022008,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030036,GO:0030154,GO:0030182,GO:0030239,GO:0031032,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031430,GO:0031672,GO:0031674,GO:0031965,GO:0031967,GO:0031975,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032989,GO:0033043,GO:0039531,GO:0039533,GO:0039535,GO:0040011,GO:0042692,GO:0042742,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043122,GO:0043123,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043292,GO:0043900,GO:0043902,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0045087,GO:0045088,GO:0045089,GO:0045214,GO:0045595,GO:0045596,GO:0045787,GO:0045931,GO:0046530,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048592,GO:0048646,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050688,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051093,GO:0051128,GO:0051129,GO:0051146,GO:0051147,GO:0051148,GO:0051150,GO:0051151,GO:0051171,GO:0051239,GO:0051240,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0055001,GO:0055002,GO:0060255,GO:0060361,GO:0060548,GO:0061061,GO:0065007,GO:0070925,GO:0071695,GO:0071840,GO:0072358,GO:0072359,GO:0080090,GO:0080134,GO:0090068,GO:0090596,GO:0097435,GO:0098542,GO:0099080,GO:0099081,GO:0099512,GO:1900087,GO:1900245,GO:1900246,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902531,GO:1902533,GO:1902806,GO:1902808,GO:1903146,GO:1903147,GO:2000045,GO:2000112 - 0.00000000000000000000000000001819 126.0
BYD3_k127_7155310_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000001777 124.0
BYD3_k127_7155310_2 integral membrane protein - - - 0.0002462 50.0
BYD3_k127_7155310_3 - - - - 0.0004084 48.0
BYD3_k127_7168974_0 Wzt C-terminal domain K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004141 348.0
BYD3_k127_7176846_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 340.0
BYD3_k127_7176846_2 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.0000000000000000000000000103 113.0
BYD3_k127_7176846_3 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000002146 109.0
BYD3_k127_7176846_4 DNA binding domain with preference for A/T rich regions - - - 0.00000000000000005653 87.0
BYD3_k127_7176846_5 Helix-hairpin-helix motif K02237 - - 0.000000000003039 75.0
BYD3_k127_7176846_6 - - - - 0.000000000006984 68.0
BYD3_k127_718609_0 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000005934 85.0
BYD3_k127_718609_1 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0001969 52.0
BYD3_k127_7187775_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 5.477e-242 758.0
BYD3_k127_7187775_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.464e-216 677.0
BYD3_k127_7187775_2 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000007476 195.0
BYD3_k127_7188446_0 ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007119 353.0
BYD3_k127_7188446_1 Protein of unknown function (DUF4255) - - - 0.0000000000000000000000000000000000003117 147.0
BYD3_k127_7188446_3 - - - - 0.0006036 50.0
BYD3_k127_7191713_0 - - - - 0.000000000000000000000000000000000000000000000003743 183.0
BYD3_k127_7191713_1 Peptidase family C25 - - - 0.00000000000000000000000001645 118.0
BYD3_k127_7192787_0 Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 579.0
BYD3_k127_71936_0 Iron/zinc purple acid phosphatase-like protein C - - - 0.0000000000000000000000000000000000000000000000000000000000004468 233.0
BYD3_k127_71936_1 Cellulose-binding domain K01183,K21606 - 3.2.1.14,3.2.1.202 0.00002588 57.0
BYD3_k127_7197323_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004144 476.0
BYD3_k127_7199351_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.088e-216 707.0
BYD3_k127_7199351_1 Pfam Dienelactone hydrolase family K07100 - - 0.000003126 53.0
BYD3_k127_7220767_0 Arsenical pump-driving ATPase K01551 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 387.0
BYD3_k127_7220767_1 CHASE3 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 379.0
BYD3_k127_7220767_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008943 362.0
BYD3_k127_7220767_3 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure - - - 0.0000000000000000000000000000003169 124.0
BYD3_k127_7220767_4 Gas vesicle synthesis protein GvpL/GvpF - - - 0.000000000000000000000000000002511 132.0
BYD3_k127_7220767_5 Gas vesicle - - - 0.000000000000000000000000000007136 123.0
BYD3_k127_7220767_6 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth - - - 0.000000000000000000000000007075 114.0
BYD3_k127_7220767_7 Gas vesicle synthesis protein GvpL/GvpF - - - 0.0000000000000000002659 97.0
BYD3_k127_7220767_8 Gas vesicle - - - 0.000003529 51.0
BYD3_k127_7227397_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 6.855e-301 938.0
BYD3_k127_7227397_1 PFAM SAICAR synthetase K01923,K13713 - 6.3.2.6,6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 403.0
BYD3_k127_7227397_2 Ribonuclease, BN K07058 - - 0.00000000000000000000000000000000000000000343 162.0
BYD3_k127_7227397_3 Bacterial regulatory protein, Fis family - - - 0.000000000002947 69.0
BYD3_k127_7227397_4 PFAM Colicin V production protein K03558 - - 0.000000003289 65.0
BYD3_k127_722792_0 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 310.0
BYD3_k127_7231269_0 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006831 442.0
BYD3_k127_7246260_0 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005061 295.0
BYD3_k127_7246260_1 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000526 184.0
BYD3_k127_7246792_0 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000005066 148.0
BYD3_k127_7246792_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000006421 139.0
BYD3_k127_7246792_2 PFAM glycosyl transferase family 9 K02841 - - 0.0000000000000000000000000000001536 132.0
BYD3_k127_7246792_3 Protein of unknown function (DUF3108) - - - 0.00000000000000001937 92.0
BYD3_k127_7254117_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 1.535e-198 630.0
BYD3_k127_7254117_1 HELICc2 K03722 - 3.6.4.12 3.127e-195 628.0
BYD3_k127_7254117_10 Mut7-C RNAse domain K00525 - 1.17.4.1 0.0000168 47.0
BYD3_k127_7254117_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008337 569.0
BYD3_k127_7254117_3 NAD(P)-binding Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 544.0
BYD3_k127_7254117_4 Zn-dependent peptidases K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004879 475.0
BYD3_k127_7254117_5 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 458.0
BYD3_k127_7254117_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 417.0
BYD3_k127_7254117_7 Domain of Unknown Function (DUF350) - - - 0.00000000000000003622 87.0
BYD3_k127_7254117_8 protein conserved in bacteria K15539 - - 0.00000000000007287 81.0
BYD3_k127_7254117_9 SdpI/YhfL protein family - - - 0.000000000007474 76.0
BYD3_k127_7254273_0 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 5.563e-235 750.0
BYD3_k127_7254273_1 (ABC) transporter K06147,K06148 - - 4.842e-220 701.0
BYD3_k127_7254273_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000007578 235.0
BYD3_k127_7254273_11 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000000000000000000000000000000000000000005428 220.0
BYD3_k127_7254273_12 - - - - 0.00000000000000000000000000000000000000000000002397 175.0
BYD3_k127_7254273_13 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000661 160.0
BYD3_k127_7254273_14 Zn peptidase K21686 - - 0.00000000000000000000000000002483 126.0
BYD3_k127_7254273_15 - - - - 0.00000000000000000000001699 107.0
BYD3_k127_7254273_16 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03320 - - 0.00000000000000000000003184 104.0
BYD3_k127_7254273_17 Putative regulatory protein - - - 0.000000000000000000001282 97.0
BYD3_k127_7254273_18 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000001231 89.0
BYD3_k127_7254273_19 Tetratricopeptide repeat - - - 0.00000000000000474 87.0
BYD3_k127_7254273_2 Peptidase family M28 - - - 7.821e-198 636.0
BYD3_k127_7254273_20 PFAM Dual specificity protein phosphatase - - - 0.000000002243 65.0
BYD3_k127_7254273_21 Rad52 22 double-strand break repair protein - GO:0001101,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009269,GO:0009314,GO:0009414,GO:0009415,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0010035,GO:0010212,GO:0010332,GO:0031668,GO:0033554,GO:0034641,GO:0042221,GO:0042631,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0070887,GO:0071214,GO:0071229,GO:0071462,GO:0071465,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0090304,GO:0104004,GO:1901360,GO:1901700,GO:1901701 - 0.0000001193 63.0
BYD3_k127_7254273_22 Cro/C1-type HTH DNA-binding domain - - - 0.0004454 49.0
BYD3_k127_7254273_3 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 429.0
BYD3_k127_7254273_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 429.0
BYD3_k127_7254273_5 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000841 382.0
BYD3_k127_7254273_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 323.0
BYD3_k127_7254273_7 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 323.0
BYD3_k127_7254273_8 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004401 268.0
BYD3_k127_7254273_9 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000008383 249.0
BYD3_k127_7255038_0 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 469.0
BYD3_k127_7255038_1 Trypsin-like serine protease - - - 0.000000000000000000000000000000000000000000001454 172.0
BYD3_k127_7255038_2 Pilus assembly protein PilX - - - 0.00000000004645 68.0
BYD3_k127_7264720_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1031.0
BYD3_k127_7264720_1 efflux transmembrane transporter activity - - - 2.605e-217 700.0
BYD3_k127_7264720_2 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008715 371.0
BYD3_k127_7264720_3 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000001205 122.0
BYD3_k127_7264720_5 general stress protein - - - 0.0000004773 57.0
BYD3_k127_7266857_0 Helix-hairpin-helix domain K02347 - - 0.0000000000000000000000000000000000001587 152.0
BYD3_k127_7273194_0 peptidyl-tyrosine sulfation - - - 0.0000000000000008503 87.0
BYD3_k127_7302132_0 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007413 404.0
BYD3_k127_7302132_1 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000001405 251.0
BYD3_k127_7302132_2 Probable zinc-ribbon domain - - - 0.000000001752 59.0
BYD3_k127_7302132_3 TPR repeat - - - 0.000008083 57.0
BYD3_k127_7310047_0 PFAM Forkhead-associated protein - - - 0.000000000000000104 91.0
BYD3_k127_7317141_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006061 514.0
BYD3_k127_7317141_1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 424.0
BYD3_k127_7317141_2 guanyl-nucleotide exchange factor activity K06978,K12287,K21105 - 3.1.1.102 0.0000000000000000000000000000000003543 154.0
BYD3_k127_7317141_3 domain, Protein K07004 - - 0.000000000000000000000000000000003217 151.0
BYD3_k127_7317141_4 Extracellular nuclease K07004 - - 0.00000000000000000000000000000002216 148.0
BYD3_k127_7317231_0 Pyrrolo-quinoline quinone - - - 3.111e-229 727.0
BYD3_k127_7317231_1 4'-phosphopantetheinyl transferase superfamily K00997,K06133 - 2.7.8.7 0.00000000000000000000000000000000000836 139.0
BYD3_k127_731927_0 aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 473.0
BYD3_k127_7323698_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003924 507.0
BYD3_k127_7323698_1 PFAM peptidase M48 Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 312.0
BYD3_k127_7332824_0 SMART PDZ DHR GLGF domain protein - - - 0.000000000000000000000000000000000000000000000000000000000008499 219.0
BYD3_k127_7332824_1 Tricorn protease homolog K03797,K08676 - 3.4.21.102 0.0000000000000000000000000000000000000000000006791 169.0
BYD3_k127_7342757_0 Cytochrome c K08685 - 1.4.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 457.0
BYD3_k127_7342757_1 Trehalose utilisation K08685 - 1.4.9.1 0.00000000000000000000000000000000000000000000000000000000000000000005926 241.0
BYD3_k127_7342757_2 Trehalose utilisation - - - 0.000000000000000000000000000000000000000000000000000000002811 204.0
BYD3_k127_7342757_3 Beta-lactamase - - - 0.000000000000001759 90.0
BYD3_k127_73521_0 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 539.0
BYD3_k127_7353786_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 424.0
BYD3_k127_7353786_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 422.0
BYD3_k127_7353786_2 Hsp70 protein K04043 - - 0.0000000000000007068 82.0
BYD3_k127_7354056_0 HlyD family secretion protein K02005 - - 0.00000000000000000000000000000000000000000000000000000000000004681 221.0
BYD3_k127_7354056_1 - - - - 0.000000000000000000000000000000000000000000000002337 181.0
BYD3_k127_735707_0 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 410.0
BYD3_k127_735707_1 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000149 123.0
BYD3_k127_7364623_0 M61 glycyl aminopeptidase - - - 0.00000000000000000000000000000000000001543 155.0
BYD3_k127_7364623_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000001552 59.0
BYD3_k127_736539_0 PFAM ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006201 278.0
BYD3_k127_736539_1 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000057 222.0
BYD3_k127_736539_2 - - - - 0.00000000000002518 75.0
BYD3_k127_7369056_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 548.0
BYD3_k127_7369056_1 Cys/Met metabolism PLP-dependent enzyme K10907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006532 538.0
BYD3_k127_7369056_2 Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000003472 220.0
BYD3_k127_7369056_3 Transcriptional regulator K13643 - - 0.0000000000000000000000000000000001364 139.0
BYD3_k127_7369056_4 hmm pf07719 - - - 0.0000000000001891 81.0
BYD3_k127_7372819_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 419.0
BYD3_k127_7372819_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002521 283.0
BYD3_k127_7372819_2 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000009923 223.0
BYD3_k127_7372819_3 COG0635 Coproporphyrinogen III oxidase and related Fe-S - - - 0.000000000000000000000000000000000000000003728 158.0
BYD3_k127_7372819_4 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431 - 3.5.1.6 0.000000000000000000000000000000000001808 138.0
BYD3_k127_7382953_0 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 318.0
BYD3_k127_7382953_1 Protein of unknown function (DUF1800) - - - 0.0000000000000000001237 97.0
BYD3_k127_7382953_2 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000001063 74.0
BYD3_k127_7384221_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 1.315e-194 616.0
BYD3_k127_7385880_0 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002206 282.0
BYD3_k127_7385880_1 COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components K02034 - - 0.00000001941 61.0
BYD3_k127_7388877_0 Voltage gated chloride channel - - - 0.000000000000000000000000000000000002312 145.0
BYD3_k127_7388877_1 SMART Transport-associated and nodulation region - - - 0.00000000000003027 83.0
BYD3_k127_7401543_0 ATPase family associated with various cellular activities (AAA) - - - 3.43e-246 769.0
BYD3_k127_7401543_1 NADH oxidase - - - 4.447e-210 662.0
BYD3_k127_7401543_2 oxidoreductase activity - - - 3.975e-208 662.0
BYD3_k127_7401543_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 455.0
BYD3_k127_7401543_4 Sugar (and other) transporter K08178 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 428.0
BYD3_k127_7401543_5 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 388.0
BYD3_k127_7401543_6 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 354.0
BYD3_k127_7401543_7 Dehydrogenase E1 component K00161,K00166,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000001084 244.0
BYD3_k127_7401543_8 - - - - 0.00000000000000000000000000000000000000000000000000005158 202.0
BYD3_k127_7401543_9 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000005375 181.0
BYD3_k127_740507_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009231 396.0
BYD3_k127_740507_1 Acetolactate synthase K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000182 249.0
BYD3_k127_740507_2 N-terminal half of MaoC dehydratase - - - 0.0000000000000000000000000000000000000004625 153.0
BYD3_k127_740507_3 Protein of unknown function (DUF2889) - - - 0.000000009875 63.0
BYD3_k127_7406281_0 Radical SAM - - - 0.0 1134.0
BYD3_k127_7406281_1 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 439.0
BYD3_k127_7406813_0 Glucose dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 602.0
BYD3_k127_7406813_1 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000006094 154.0
BYD3_k127_7406813_2 Tetratricopeptide repeat domain 25 - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006996,GO:0007275,GO:0007368,GO:0007389,GO:0007423,GO:0007507,GO:0008150,GO:0009653,GO:0009790,GO:0009799,GO:0009855,GO:0009887,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0032474,GO:0032501,GO:0032502,GO:0042471,GO:0042472,GO:0043583,GO:0044085,GO:0044424,GO:0044464,GO:0044782,GO:0048513,GO:0048562,GO:0048568,GO:0048598,GO:0048731,GO:0048839,GO:0048840,GO:0048856,GO:0060271,GO:0061371,GO:0070925,GO:0071840,GO:0072359,GO:0090596,GO:0120031,GO:0120036 - 0.000002807 51.0
BYD3_k127_7406813_3 SPTR Tetratricopeptide TPR_2 repeat protein - - - 0.000003978 51.0
BYD3_k127_740760_0 AMMECR1 K06990,K09141 - - 0.00000000000000000000000000000000000000000000001476 176.0
BYD3_k127_740760_1 Extradiol ring-cleavage dioxygenase, class III K06990,K09141 - - 0.0000000000000000000000000000000000000000005382 164.0
BYD3_k127_740760_2 site-specific DNA-methyltransferase (adenine-specific) activity - - - 0.00000000000000000000000000000000005174 149.0
BYD3_k127_7415245_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 435.0
BYD3_k127_7415245_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004398 305.0
BYD3_k127_7415245_2 periplasmic or secreted lipoprotein - - - 0.000000000000000000000001988 106.0
BYD3_k127_7415245_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000001628 65.0
BYD3_k127_7418353_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 379.0
BYD3_k127_7425590_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 1.45e-203 645.0
BYD3_k127_7425590_1 Argininosuccinate lyase C-terminal K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000004686 177.0
BYD3_k127_7425590_2 cellulose binding - - - 0.00000000000000000000000001164 117.0
BYD3_k127_7431561_0 VWA domain containing CoxE-like protein K07161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005799 308.0
BYD3_k127_7431561_1 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000008093 209.0
BYD3_k127_7431561_2 SUF system FeS assembly protein, NifU family K04488 - - 0.0000000000000000000000000004315 117.0
BYD3_k127_7431561_3 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000007518 74.0
BYD3_k127_7436925_0 RimK-like ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 529.0
BYD3_k127_7436925_1 Fungal family of unknown function (DUF1776) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 378.0
BYD3_k127_7436925_2 metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003929 275.0
BYD3_k127_7436925_3 - - - - 0.000000000000000003476 94.0
BYD3_k127_7436925_4 - - - - 0.000001563 54.0
BYD3_k127_745284_0 efflux transmembrane transporter activity K02004 - - 9.359e-241 768.0
BYD3_k127_745284_1 efflux transmembrane transporter activity K02004 - - 7.383e-234 748.0
BYD3_k127_745284_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000599 401.0
BYD3_k127_745284_3 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 302.0
BYD3_k127_745284_4 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002215 256.0
BYD3_k127_7454782_0 efflux transmembrane transporter activity - - - 4.073e-225 723.0
BYD3_k127_7454782_1 efflux transmembrane transporter activity - - - 0.00000000008004 63.0
BYD3_k127_7457386_0 Ceramidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001166 248.0
BYD3_k127_7457386_1 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000322 69.0
BYD3_k127_7457386_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000214 55.0
BYD3_k127_7458834_0 Bacterial protein of unknown function (DUF885) - - - 3.492e-194 619.0
BYD3_k127_7458834_1 response to heat K03695,K03696,K03697,K03798 - - 0.00000000000000000000000000000000000000000000000000009471 197.0
BYD3_k127_7461141_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 314.0
BYD3_k127_7461141_1 oxidoreductase activity - - - 0.0000007452 50.0
BYD3_k127_7467453_0 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 372.0
BYD3_k127_7467453_1 COG1541 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003542 284.0
BYD3_k127_7467453_2 - - - - 0.00000000000000000000000000000000000000000000000000000003398 215.0
BYD3_k127_7469170_0 ADP-glyceromanno-heptose 6-epimerase activity K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000082 262.0
BYD3_k127_7469170_1 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000001903 244.0
BYD3_k127_7474831_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008829 530.0
BYD3_k127_7476692_0 3-isopropylmalate dehydratase activity K01681,K01703,K01704,K17749 - 4.2.1.3,4.2.1.33,4.2.1.35 3.811e-211 672.0
BYD3_k127_7488805_0 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000002215 193.0
BYD3_k127_7488805_1 TPR Domain containing protein K12600 - - 0.0000000000000000000001153 113.0
BYD3_k127_7492784_0 Methyltransferase domain - - - 0.000000000000000000004257 102.0
BYD3_k127_7492784_1 Winged helix DNA-binding domain - - - 0.00000000000000000002492 102.0
BYD3_k127_7492784_2 uses NADH to detoxify nitric oxide (NO), protecting several 4Fe-4S NO-sensitive enzymes. Has at least 2 reductase partners, only one of which (NorW, flavorubredoxin reductase) has been identified. NO probably binds to the di-iron center - GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0043446,GO:0043448,GO:0044237,GO:0044248,GO:0071704,GO:1901575 - 0.00002261 55.0
BYD3_k127_7492784_3 - - - - 0.00005279 54.0
BYD3_k127_7497070_0 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007669 332.0
BYD3_k127_7497070_1 COGs COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008789 243.0
BYD3_k127_7497070_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000003833 134.0
BYD3_k127_7497070_3 Pentapeptide repeat protein - - - 0.0000000000007641 74.0
BYD3_k127_7497070_4 - - - - 0.0005064 46.0
BYD3_k127_750090_0 Aminoglycoside phosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009582 383.0
BYD3_k127_750090_1 PFAM Ornithine cyclodeaminase mu-crystallin K01750,K19244 - 1.4.1.1,4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000005855 257.0
BYD3_k127_750090_2 Family of unknown function (DUF1028) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002659 248.0
BYD3_k127_750090_3 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000001285 225.0
BYD3_k127_750090_4 Histidine kinase-like ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000001643 211.0
BYD3_k127_750090_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000001134 186.0
BYD3_k127_750090_6 Phosphoglycerate mutase - - - 0.000000000000000000000001667 112.0
BYD3_k127_750090_8 blue (type 1) copper K00368 - 1.7.2.1 0.0000000000002085 79.0
BYD3_k127_750090_9 PFAM blue (type 1) copper domain protein - - - 0.000000000001389 75.0
BYD3_k127_75072_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004372 295.0
BYD3_k127_75072_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000009315 171.0
BYD3_k127_75072_2 MerR HTH family regulatory protein K13640 - - 0.00000000000000000000000000000000004762 138.0
BYD3_k127_7514027_0 AMP-binding enzyme K00666 - - 1.428e-220 694.0
BYD3_k127_7514027_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000008055 66.0
BYD3_k127_7515869_0 Domain of unknown function (DUF4129) - - - 0.0000003046 62.0
BYD3_k127_7517769_0 Tricorn protease C1 domain K08676 - - 1.404e-251 794.0
BYD3_k127_7561042_0 Amino acid adenylation domain - - - 4.477e-238 768.0
BYD3_k127_7561042_1 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 537.0
BYD3_k127_7561042_2 AAA domain K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000006046 231.0
BYD3_k127_7561042_3 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000005399 169.0
BYD3_k127_7561042_4 Winged helix-turn helix - - - 0.0000000000000000000000000000000000000006592 153.0
BYD3_k127_7561042_5 Heparinase II/III N-terminus - - - 0.000000000000000000000000000009934 127.0
BYD3_k127_7561042_6 pfam yhs - - - 0.000000002986 61.0
BYD3_k127_7582564_0 Belongs to the aldehyde dehydrogenase family K22187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 484.0
BYD3_k127_7582564_1 Domain of unknown function DUF108 K06989 - 1.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000001888 246.0
BYD3_k127_7590918_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000002783 180.0
BYD3_k127_7594454_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000003067 248.0
BYD3_k127_7594454_1 Transcriptional regulator - - - 0.0000000000006524 72.0
BYD3_k127_7595417_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 4.765e-300 937.0
BYD3_k127_7595417_1 Inorganic H+ pyrophosphatase K15987 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003869 501.0
BYD3_k127_7604761_0 Molybdopterin oxidoreductase Fe4S4 domain K00370 - 1.7.5.1 0.0 1793.0
BYD3_k127_7604761_1 nitrate reductase beta subunit K00371 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009898,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0031235,GO:0032991,GO:0033554,GO:0042126,GO:0043436,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0048037,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204,GO:2001057 1.7.5.1 1.508e-227 714.0
BYD3_k127_7604761_2 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 341.0
BYD3_k127_7604761_3 nitrate reductase activity K00370,K00374,K02575 GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006950,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009628,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0036293,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0046906,GO:0048037,GO:0050896,GO:0055114,GO:0070469,GO:0070470,GO:0070482,GO:0071944,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000001333 218.0
BYD3_k127_7604761_4 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000009968 198.0
BYD3_k127_7604761_5 Cytochrome c - - - 0.000000000000000000000000000000000000000001444 168.0
BYD3_k127_7604761_6 Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - 0.0000000000000000000000000000000002119 138.0
BYD3_k127_7604761_7 Transcriptional regulator - - - 0.0000000000000000000001121 102.0
BYD3_k127_7604761_8 chaperone-mediated protein complex assembly K00373,K17052 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016530,GO:0022607,GO:0034622,GO:0042126,GO:0042128,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0051131,GO:0065003,GO:0071704,GO:0071840,GO:0071941,GO:0140104,GO:2001057 - 0.00000000000000000000426 100.0
BYD3_k127_7604761_9 helix_turn_helix, Lux Regulon - - - 0.000000001123 68.0
BYD3_k127_7609904_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001566 259.0
BYD3_k127_7612331_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 6.931e-257 797.0
BYD3_k127_7612331_1 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 0.000000000000000000000000000000000000000000000000001212 202.0
BYD3_k127_7612331_2 NAD-dependent epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000001066 109.0
BYD3_k127_7614507_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 3.452e-245 776.0
BYD3_k127_7614507_1 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000001232 236.0
BYD3_k127_7614507_2 - - - - 0.00000000000000000000000000000000000000000000000002947 185.0
BYD3_k127_7614507_3 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000002976 172.0
BYD3_k127_7614507_4 ABC-type multidrug transport system, ATPase component K01990 - - 0.00000000000000000000000000000000000000000001398 176.0
BYD3_k127_7614507_5 Metallo-peptidase family M12 - - - 0.00000000000000000000000000000001926 140.0
BYD3_k127_7614507_6 Thioredoxin - - - 0.000000000000000001917 95.0
BYD3_k127_7614507_8 sequence-specific DNA binding - - - 0.0006667 44.0
BYD3_k127_7616079_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 360.0
BYD3_k127_7616079_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 331.0
BYD3_k127_7619705_0 Belongs to the carbamoyltransferase HypF family K04656 - - 1.666e-300 942.0
BYD3_k127_7619705_1 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000001493 136.0
BYD3_k127_7619705_2 carbon dioxide binding K04653 - - 0.00000000000000000000003837 103.0
BYD3_k127_7634497_0 ASPIC and UnbV - - - 3.727e-234 734.0
BYD3_k127_7634497_1 PFAM carbohydrate kinase K00854 - 2.7.1.17 5.726e-223 701.0
BYD3_k127_7634497_2 ASPIC and UnbV - - - 3.389e-202 672.0
BYD3_k127_7634497_3 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 452.0
BYD3_k127_7634497_4 addiction module antidote protein, CC2985 family - - - 0.000000000000000000000000000000000000000000000303 184.0
BYD3_k127_7635378_0 -O-antigen K18814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005494 291.0
BYD3_k127_7635378_1 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000003299 136.0
BYD3_k127_7635378_2 transferase activity, transferring glycosyl groups K01912 - 6.2.1.30 0.000000000000000000000000004716 118.0
BYD3_k127_7635378_3 Glycosyl transferase - - - 0.000000000000000000000002368 107.0
BYD3_k127_7635378_4 polysaccharide deacetylase - - - 0.000000000000000000001295 108.0
BYD3_k127_7655950_0 Metallo-peptidase family M12 - - - 0.000000000000000000000007833 119.0
BYD3_k127_7655950_1 Leucine-rich repeat (LRR) protein - - - 0.00000001724 68.0
BYD3_k127_7675793_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.072e-318 995.0
BYD3_k127_7675793_1 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 425.0
BYD3_k127_7675793_2 DNA recombination-mediator protein A K03168,K04096 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000009072 227.0
BYD3_k127_7675793_3 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000001278 227.0
BYD3_k127_7676972_0 Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 448.0
BYD3_k127_7676972_1 Acts as a magnesium transporter K03281,K04767,K06213,K15986 GO:0000287,GO:0003674,GO:0005488,GO:0005515,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015693,GO:0030001,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0051179,GO:0051234,GO:0070838,GO:0072511 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 327.0
BYD3_k127_7676972_2 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000004672 206.0
BYD3_k127_7676972_3 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000398 178.0
BYD3_k127_7682504_0 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 369.0
BYD3_k127_7682504_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000001511 101.0
BYD3_k127_7687121_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 503.0
BYD3_k127_7687121_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000006628 90.0
BYD3_k127_7687121_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000001189 88.0
BYD3_k127_7689180_0 Peptidase S9, prolyl oligopeptidase active site domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005176 432.0
BYD3_k127_7689180_1 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000557 196.0
BYD3_k127_769761_0 Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 517.0
BYD3_k127_769761_1 chlorophyll binding - - - 0.000000000000000000000000000000000000000001576 175.0
BYD3_k127_769761_2 - - - - 0.0005947 49.0
BYD3_k127_7710685_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000001309 253.0
BYD3_k127_7710685_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000002387 237.0
BYD3_k127_7710685_2 hydrolase K01048 - 3.1.1.5 0.0002177 44.0
BYD3_k127_7713481_0 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 482.0
BYD3_k127_7713481_1 Proline racemase K12658 - 5.1.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 455.0
BYD3_k127_7713481_2 FAD dependent oxidoreductase K00303,K21061 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006877 449.0
BYD3_k127_7713481_3 Dihydrodipicolinate synthetase family K21062 - 3.5.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008664 419.0
BYD3_k127_7713481_4 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007267 266.0
BYD3_k127_7713481_5 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000007627 209.0
BYD3_k127_7713481_6 - - - - 0.000000000000000000000000000003482 120.0
BYD3_k127_7713481_7 Subtilase family - - - 0.00000000000000000000000009424 125.0
BYD3_k127_7713481_8 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000001002 96.0
BYD3_k127_7713481_9 Autotransporter beta-domain - - - 0.0000000000000000001294 105.0
BYD3_k127_7730641_0 signal peptide peptidase SppA, 36K type K04773 - - 0.00000000000108 71.0
BYD3_k127_7730641_1 tail specific protease K03797 GO:0003674,GO:0003824,GO:0004175,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009653,GO:0009987,GO:0016787,GO:0019538,GO:0023052,GO:0030154,GO:0030288,GO:0030313,GO:0030435,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043603,GO:0043900,GO:0043902,GO:0043934,GO:0044237,GO:0044238,GO:0044464,GO:0046983,GO:0048518,GO:0048522,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0140096,GO:1900190,GO:1900192,GO:1901564 3.4.21.102 0.00005582 55.0
BYD3_k127_774180_0 von Willebrand factor (vWF) type A domain K02448 - - 0.00000000000009589 84.0
BYD3_k127_774198_0 4Fe-4S dicluster domain K00184 - - 0.0 1173.0
BYD3_k127_774198_1 Polysulphide reductase, NrfD K00185 - - 6.778e-224 703.0
BYD3_k127_774198_2 Aminotransferase class-III K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 499.0
BYD3_k127_774198_3 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 307.0
BYD3_k127_774198_4 Protein of unknown function (DUF3341) - - - 0.000000000000007758 76.0
BYD3_k127_77522_0 introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 430.0
BYD3_k127_7784005_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 499.0
BYD3_k127_7784005_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006837 359.0
BYD3_k127_7784005_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003852 340.0
BYD3_k127_7784005_3 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 293.0
BYD3_k127_7784005_4 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006361 269.0
BYD3_k127_7784005_5 Protein of unknown function DUF72 - - - 0.00000000000000001238 84.0
BYD3_k127_7784005_6 - - - - 0.00001215 55.0
BYD3_k127_7786504_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 580.0
BYD3_k127_7800221_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 479.0
BYD3_k127_7800221_1 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 353.0
BYD3_k127_7800221_2 DinB family - - - 0.00000000000000000000000000000000000000000000000000000005153 201.0
BYD3_k127_7800221_3 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000001017 185.0
BYD3_k127_7803672_0 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 450.0
BYD3_k127_7803672_1 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 289.0
BYD3_k127_7803672_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000003287 213.0
BYD3_k127_7803672_3 MgtC family K07507 - - 0.00000000000000000000000000000000000006387 148.0
BYD3_k127_7803672_4 type II and III secretion system protein K02453 - - 0.0002307 51.0
BYD3_k127_781140_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 473.0
BYD3_k127_7813810_0 PFAM Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008635 404.0
BYD3_k127_7813810_1 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000347 178.0
BYD3_k127_7814136_0 required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 299.0
BYD3_k127_7814136_1 Zinc-binding dehydrogenase K00060 - 1.1.1.103 0.0000000000000000000000000000000000000000000000000000000000000000000000000006707 269.0
BYD3_k127_7814136_2 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639,K00652 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0016874,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000608 188.0
BYD3_k127_7814483_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.0 1023.0
BYD3_k127_7814483_1 C-terminal, D2-small domain, of ClpB protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004222 427.0
BYD3_k127_7814483_2 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000001997 227.0
BYD3_k127_7814483_3 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000001225 181.0
BYD3_k127_7814483_4 Thioredoxin domain - - - 0.0000000000000000000000000000000000001867 148.0
BYD3_k127_7814483_5 Thioredoxin domain - - - 0.00000000000000000000003389 100.0
BYD3_k127_7814483_6 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000642 91.0
BYD3_k127_7814483_7 Tetratricopeptide repeat - - - 0.0000004844 61.0
BYD3_k127_7814483_8 Putative adhesin - - - 0.0000005893 59.0
BYD3_k127_7814483_9 Carboxypeptidase regulatory-like domain - - - 0.00001486 51.0
BYD3_k127_7818567_0 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 370.0
BYD3_k127_7818567_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000001814 251.0
BYD3_k127_7818567_2 TIGRFAM geranylgeranyl reductase - - - 0.0000000000000000000000000000000000000000000000000000000000002157 226.0
BYD3_k127_7818567_3 integral membrane protein - - - 0.00000000000000003792 87.0
BYD3_k127_78404_0 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 443.0
BYD3_k127_78404_1 PFAM Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 424.0
BYD3_k127_7842211_0 Carboxypeptidase regulatory-like domain - - - 1.386e-202 673.0
BYD3_k127_7842211_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000988 174.0
BYD3_k127_7842211_2 6-pyruvoyl tetrahydropterin synthase - - - 0.00000000000000004692 85.0
BYD3_k127_7842211_3 peptidyl-tyrosine sulfation - - - 0.00000001255 66.0
BYD3_k127_7849060_0 Phospholipase D Transphosphatidylase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 389.0
BYD3_k127_7849060_1 Cytochrome c K08685 - 1.4.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 388.0
BYD3_k127_7849060_2 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001076 274.0
BYD3_k127_7849060_3 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002168 276.0
BYD3_k127_7849060_5 Beta-lactamase - - - 0.0000000001679 74.0
BYD3_k127_7849060_6 Transcriptional regulator K13572 - - 0.00000002256 63.0
BYD3_k127_7855864_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 327.0
BYD3_k127_7855864_1 L-asparaginase II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000154 289.0
BYD3_k127_7855864_2 lipoprotein localization to outer membrane K02004 - - 0.00000000000000000000000000000000000000000000000000000003879 209.0
BYD3_k127_7855864_3 lysyltransferase activity K07027 - - 0.0000000000000000000000006145 118.0
BYD3_k127_7855864_4 TIGRFAM Competence protein ComEA, helix-hairpin-helix K02237 - - 0.0000000000009551 72.0
BYD3_k127_7855864_5 von Willebrand factor (vWF) type A domain K07114 - - 0.0000001915 63.0
BYD3_k127_7855864_6 - - - - 0.00007871 53.0
BYD3_k127_786480_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0 1483.0
BYD3_k127_786480_1 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000000000000000000000000000002297 143.0
BYD3_k127_786480_2 PFAM PEGA domain - - - 0.0001969 49.0
BYD3_k127_7873476_0 Amidohydrolase K07045 - - 0.000000000000008291 83.0
BYD3_k127_7873476_1 Methyltransferase domain - - - 0.0000003262 52.0
BYD3_k127_7881842_0 3-isopropylmalate dehydratase K01703,K17749 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000562 379.0
BYD3_k127_7881842_1 Acyl-CoA reductase (LuxC) - - - 0.00000000000000000000000000000000000000000000000000000000000000001384 242.0
BYD3_k127_7881842_2 Acyl-protein synthetase, LuxE K06046 - 6.2.1.19 0.000000000000000000000000000000000000000000000000000000000164 218.0
BYD3_k127_7881842_3 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000343 197.0
BYD3_k127_7881842_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000009405 108.0
BYD3_k127_7881842_5 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000001965 83.0
BYD3_k127_7886706_0 Oxidoreductase domain protein - - - 1.714e-200 632.0
BYD3_k127_7886706_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 339.0
BYD3_k127_7886706_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000006373 132.0
BYD3_k127_7886706_4 von Willebrand factor, type A - - - 0.00000000000000006344 92.0
BYD3_k127_7886706_5 Belongs to the Nudix hydrolase family - - - 0.0000000000000358 78.0
BYD3_k127_7886706_6 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.000000003119 66.0
BYD3_k127_7886706_7 Tetratricopeptide repeat - - - 0.00002618 56.0
BYD3_k127_7894182_0 domain protein - - - 0.0000001648 63.0
BYD3_k127_7898505_0 BON domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 349.0
BYD3_k127_7898505_1 bacterial OsmY and nodulation domain - - - 0.0000000000000000000000000000000002519 144.0
BYD3_k127_7898505_2 ErfK YbiS YcfS YnhG K16291 - - 0.00000000000000001368 96.0
BYD3_k127_7898505_3 AMP binding - - - 0.00000000000000006979 89.0
BYD3_k127_7898505_4 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000309 68.0
BYD3_k127_7898505_5 Universal stress protein family - - - 0.00000000006684 71.0
BYD3_k127_7904547_0 Small multi-drug export protein - - - 0.0000000000000000001368 98.0
BYD3_k127_7904547_1 Protein of unknown function (DUF3179) - - - 0.00000000001996 76.0
BYD3_k127_7912694_0 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 304.0
BYD3_k127_7912694_1 helix_turn_helix, mercury resistance K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000001082 232.0
BYD3_k127_7912694_2 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000001946 192.0
BYD3_k127_7912694_3 Phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000005049 61.0
BYD3_k127_791984_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000486 258.0
BYD3_k127_791984_1 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000002972 208.0
BYD3_k127_791984_2 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000001804 120.0
BYD3_k127_7927017_0 LVIVD repeat - - - 0.0 1320.0
BYD3_k127_7927017_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 479.0
BYD3_k127_7927017_2 heat shock protein binding - - - 0.00000001903 66.0
BYD3_k127_7927017_3 NapC/NirT cytochrome c family, N-terminal region - - - 0.000004644 58.0
BYD3_k127_7927017_4 Class III cytochrome C family - - - 0.0000647 52.0
BYD3_k127_7927204_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 565.0
BYD3_k127_7927204_1 Sodium/hydrogen exchanger family K11105 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 545.0
BYD3_k127_7937611_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000003919 120.0
BYD3_k127_7954152_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.00000000000000000000000000000000000000000000000000000001981 205.0
BYD3_k127_7954152_1 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000002584 196.0
BYD3_k127_7954152_2 BadF BadG BcrA BcrD K00884,K02616 - 2.7.1.59 0.000000000000000000000000000000000000000000007521 175.0
BYD3_k127_7964943_0 ABC-type polysaccharide polyol phosphate transport system, ATPase component K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 385.0
BYD3_k127_7964943_1 COG1682 ABC-type polysaccharide polyol phosphate export systems, permease component K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 330.0
BYD3_k127_7964943_2 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.000000000000000001782 88.0
BYD3_k127_7964943_3 Methyltransferase domain - - - 0.000000000000000003776 89.0
BYD3_k127_7975412_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 598.0
BYD3_k127_7975412_1 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007614 374.0
BYD3_k127_7975412_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009448 355.0
BYD3_k127_7975412_3 Isochorismatase family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000003371 155.0
BYD3_k127_7975412_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000001255 126.0
BYD3_k127_7981315_0 threonine synthase activity K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 514.0
BYD3_k127_7981315_1 Belongs to the PAPS reductase family. CysH subfamily K00390,K00860 GO:0003674,GO:0003824,GO:0004604,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016667,GO:0016671,GO:0044424,GO:0044464,GO:0055114 1.8.4.10,1.8.4.8,2.7.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001013 275.0
BYD3_k127_7981315_2 Tetrapyrrole (Corrin/Porphyrin) Methylases K01719,K01749,K02303,K13542,K13543 GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107,2.5.1.61,4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009892 272.0
BYD3_k127_7981315_3 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000001882 258.0
BYD3_k127_7981315_4 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00366 - 1.7.7.1 0.00000000000000000000000000000000000000000000000000000000000000000001161 240.0
BYD3_k127_7981315_5 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000003892 124.0
BYD3_k127_7981315_6 Molybdopterin converting factor, small subunit K03636 - - 0.00000000000000000000000003656 115.0
BYD3_k127_7982628_0 Carboxypeptidase regulatory-like domain - - - 3.111e-197 635.0
BYD3_k127_7982628_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 472.0
BYD3_k127_7989562_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 468.0
BYD3_k127_799214_0 Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) K08680 - 4.2.99.20 0.00000000000000000000000000000000000000000000000001527 190.0
BYD3_k127_7993863_0 glycosyl transferase - - - 0.0005274 48.0
BYD3_k127_7997445_0 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006315 299.0
BYD3_k127_7997445_1 Domain of unknown function (DUF4081) K06976 - - 0.00000000000000000007677 101.0
BYD3_k127_7998017_0 Tetratricopeptide repeat - - - 0.0000005212 61.0
BYD3_k127_8022957_0 iron-nicotianamine transmembrane transporter activity - - - 6.209e-274 868.0
BYD3_k127_8022957_1 Alcohol dehydrogenase zinc-binding domain protein K07119 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004131 454.0
BYD3_k127_8022957_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 445.0
BYD3_k127_8022957_3 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000001068 192.0
BYD3_k127_8022957_4 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.000000000000000000003839 93.0
BYD3_k127_8022957_5 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000001106 95.0
BYD3_k127_8036272_0 High confidence in function and specificity - - - 3.871e-295 919.0
BYD3_k127_8036272_1 Domain of unknown function (DUF3459) K01236 - 3.2.1.141 3.18e-280 873.0
BYD3_k127_8038630_0 DNA-templated transcription, initiation K03088 - - 0.000000000004776 73.0
BYD3_k127_8041786_0 gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 568.0
BYD3_k127_8041786_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02236,K02278,K02506,K02654,K10966 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000004405 223.0
BYD3_k127_8041786_2 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000008284 141.0
BYD3_k127_8045713_0 hyperosmotic response - - - 0.0000003963 57.0
BYD3_k127_8045713_1 - - - - 0.0000004565 60.0
BYD3_k127_804799_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 404.0
BYD3_k127_804799_1 Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 297.0
BYD3_k127_8052892_0 Alkyl sulfatase dimerisation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 459.0
BYD3_k127_8052892_1 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 369.0
BYD3_k127_8052892_2 Domain of unknown function (DUF427) - - - 0.000000000000000000000000000000000000000000009103 163.0
BYD3_k127_8052892_3 Penicillinase repressor - - - 0.000000000000000000000000000000000000000641 151.0
BYD3_k127_8052892_4 PFAM AhpC TSA family K03386 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0020012,GO:0030682,GO:0042221,GO:0043207,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0051920,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0070887,GO:0075136,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000000000004815 81.0
BYD3_k127_8052892_5 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.0000000002302 63.0
BYD3_k127_8060039_0 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 354.0
BYD3_k127_8060039_1 SNARE associated Golgi protein - - - 0.00000000000000359 81.0
BYD3_k127_8062611_0 ABC transporter K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003678 486.0
BYD3_k127_8075936_0 MacB-like periplasmic core domain - - - 1.275e-204 663.0
BYD3_k127_8075936_1 HTH domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 600.0
BYD3_k127_8075936_2 TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 472.0
BYD3_k127_8075936_3 cAMP biosynthetic process - - - 0.000000000000000000000000000000000000002582 163.0
BYD3_k127_8075936_4 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000005469 149.0
BYD3_k127_808256_0 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 463.0
BYD3_k127_808256_1 PFAM Amylo-alpha-16-glucosidase - - - 0.00000000000000000000000000000000000000000000000000000000000001085 219.0
BYD3_k127_8086873_0 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 598.0
BYD3_k127_8086873_1 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 403.0
BYD3_k127_8087129_0 secondary active p-aminobenzoyl-glutamate transmembrane transporter activity K12942 - - 5.608e-218 687.0
BYD3_k127_8087129_1 Pyruvate kinase, alpha/beta domain K00873 GO:0003674,GO:0003824,GO:0004743,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 404.0
BYD3_k127_8087129_2 TIGRFAM Hydrogenase accessory protein HypB K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 294.0
BYD3_k127_8087129_3 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.00000000000000000000000000176 116.0
BYD3_k127_8087129_4 cell redox homeostasis K02199 - - 0.000000000000000000000001775 110.0
BYD3_k127_8087129_5 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000000002656 82.0
BYD3_k127_8087129_6 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.00000005122 56.0
BYD3_k127_8087129_7 Pfam Polysulphide reductase, NrfD - - - 0.0000002238 53.0
BYD3_k127_8090046_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 400.0
BYD3_k127_8090046_1 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000008451 203.0
BYD3_k127_8090046_2 Polysaccharide biosynthesis protein - - - 0.0000000000000044 84.0
BYD3_k127_8090046_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000007783 59.0
BYD3_k127_8102135_0 PHP domain protein K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000359 289.0
BYD3_k127_8102135_1 GAF domain - - - 0.00000000000000000000000000000009334 141.0
BYD3_k127_8102135_2 - - - - 0.000000000000004032 88.0
BYD3_k127_8102135_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000001513 61.0
BYD3_k127_8102135_4 E-Z type HEAT repeats - - - 0.000004022 58.0
BYD3_k127_8103443_0 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 407.0
BYD3_k127_8103443_1 Catalyzes the formation of UDP-glucose, from UTP and glucose 1-phosphate K00966,K16881 GO:0000166,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0003983,GO:0005488,GO:0006011,GO:0006139,GO:0006725,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0009225,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0051748,GO:0055086,GO:0070569,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363 2.7.7.13,5.4.2.8 0.000000000000000000000000000000000000000000000000000006373 202.0
BYD3_k127_8103443_2 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000001236 179.0
BYD3_k127_8103443_3 CYTH K05873 - 4.6.1.1 0.000000000000000000000000522 112.0
BYD3_k127_8103443_4 Alkyl hydroperoxide reductase - - - 0.000000000002678 70.0
BYD3_k127_8103443_5 Alkyl hydroperoxide reductase thiol specific antioxidant Mal K03564 - 1.11.1.15 0.00008661 49.0
BYD3_k127_8104614_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008277 617.0
BYD3_k127_8104614_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000004539 168.0
BYD3_k127_810482_0 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000005404 260.0
BYD3_k127_810482_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000001739 214.0
BYD3_k127_8118073_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 322.0
BYD3_k127_8118073_1 COG1960 Acyl-CoA dehydrogenases - - - 0.00000000000000000000000000000000000000008747 154.0
BYD3_k127_8118073_2 Ankyrin repeat-containing protein - - - 0.000000000000000268 85.0
BYD3_k127_8118944_0 Associated with various cellular activities K03924 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000008365 139.0
BYD3_k127_8119655_0 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001192 283.0
BYD3_k127_8119655_1 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000001487 191.0
BYD3_k127_8124443_0 Large extracellular alpha-helical protein K06894 - - 0.0 1110.0
BYD3_k127_8124443_1 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 517.0
BYD3_k127_8124443_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 458.0
BYD3_k127_8124443_3 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000578 437.0
BYD3_k127_8124443_4 4 iron, 4 sulfur cluster binding K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 315.0
BYD3_k127_8124443_5 Protein of unknown function (DUF3616) - - - 0.0000000000000000000000000008508 125.0
BYD3_k127_8124443_6 Glycine cleavage H-protein - - - 0.00000000000000000000003592 108.0
BYD3_k127_8124443_7 Glycine cleavage H-protein K02437 - - 0.0001104 48.0
BYD3_k127_8131975_0 Ribosomal protein S1 K02945 - - 1.646e-200 638.0
BYD3_k127_8131975_1 PKD domain containing protein K01337,K20276,K21449 - 3.4.21.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 522.0
BYD3_k127_8131975_2 D-alanyl-d-alanine carboxypeptidase K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000132 231.0
BYD3_k127_8131975_3 alpha beta - - - 0.00000000000000000001037 109.0
BYD3_k127_8131975_4 cellulase activity - - - 0.0000000000004577 84.0
BYD3_k127_8134911_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009218 366.0
BYD3_k127_8134911_1 Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily K01897 - 6.2.1.3 0.000000000000000000000000000000000000000007564 156.0
BYD3_k127_8156595_0 Protein of unknown function (DUF2752) - - - 0.000000000008609 72.0
BYD3_k127_8156595_1 PFAM alpha beta hydrolase fold - - - 0.00004741 51.0
BYD3_k127_8162040_0 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 342.0
BYD3_k127_8162040_1 PFAM Chain length determinant protein - - - 0.000000000000000002757 89.0
BYD3_k127_8162040_2 Glycosyl transferases group 1 - - - 0.00003002 48.0
BYD3_k127_8163807_0 ABC transporter K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 366.0
BYD3_k127_8180600_0 HEAT repeats - - - 0.00000000000000001589 95.0
BYD3_k127_8190899_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 524.0
BYD3_k127_8190899_1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain - - - 0.000000000000000000000000000000000000000000000004545 176.0
BYD3_k127_8190899_2 Scaffold protein Nfu/NifU N terminal - - - 0.00000000028 65.0
BYD3_k127_819385_0 Copper binding periplasmic protein CusF K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001036 273.0
BYD3_k127_819385_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000001198 227.0
BYD3_k127_819385_2 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000001806 202.0
BYD3_k127_819385_3 Copper binding periplasmic protein CusF - - - 0.00000005301 64.0
BYD3_k127_8197302_0 deoxyhypusine monooxygenase activity K05385 - - 0.000000000000000005568 98.0
BYD3_k127_8197371_0 modulator of DNA gyrase K03568 - - 0.00000000000000000000000000000000000000000004877 169.0
BYD3_k127_8197371_1 membrane K11622 - - 0.0000000001201 68.0
BYD3_k127_8197371_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.000447 42.0
BYD3_k127_819835_0 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000959 154.0
BYD3_k127_819835_1 mandelate racemase muconate lactonizing - - - 0.0000000002832 65.0
BYD3_k127_8207723_0 arylsulfatase A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 414.0
BYD3_k127_8210160_0 PFAM type II secretion system K12511 - - 0.000000000000000000000000000000000000000000000000000000000449 209.0
BYD3_k127_8210160_1 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000002648 101.0
BYD3_k127_8210160_2 COG0457 FOG TPR repeat - - - 0.000000002379 66.0
BYD3_k127_8225285_0 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000001194 132.0
BYD3_k127_82337_0 Fibronectin type 3 domain - - - 0.00000000000000000000000000000000000000000000000000000000000001047 234.0
BYD3_k127_8234908_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000001042 197.0
BYD3_k127_8234908_1 Glucose-6-phosphate dehydrogenase subunit - - - 0.0000000000000000000000000000000000000000008463 168.0
BYD3_k127_8237898_0 acyl-CoA dehydrogenase K00248 - 1.3.8.1 1.851e-200 640.0
BYD3_k127_8237898_1 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000368 533.0
BYD3_k127_8237898_2 AMP-binding enzyme C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 410.0
BYD3_k127_8237898_3 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K07516 - 1.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 379.0
BYD3_k127_8237898_4 Zn-dependent hydrolase, glyoxylase - - - 0.000000000000000000000000000000000000000000000000000000009768 216.0
BYD3_k127_8237898_5 FG-GAP repeat - - - 0.00000000000000000000000000000000000000000000000003622 205.0
BYD3_k127_8237898_6 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000001008 155.0
BYD3_k127_8237898_7 Transposase - - - 0.0000002606 56.0
BYD3_k127_8247794_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004686 255.0
BYD3_k127_8247794_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000002197 246.0
BYD3_k127_8247794_2 Kelch motif - - - 0.000000000000000000000000000000000000000000000002812 188.0
BYD3_k127_8251693_0 Penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 370.0
BYD3_k127_8260300_0 Iodothyronine deiodinase - - - 0.00000000000000000000000001012 113.0
BYD3_k127_8260300_1 - - - - 0.0000000000000000000008535 97.0
BYD3_k127_8262308_0 efflux transmembrane transporter activity K02004 - - 2.655e-235 753.0
BYD3_k127_8262308_1 Domain of unknown function (DUF5117) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 501.0
BYD3_k127_8262308_2 serine threonine protein phosphatase K20074 - 3.1.3.16 0.00000000000000000000000000000000001149 152.0
BYD3_k127_8262308_3 COG0515 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000002781 117.0
BYD3_k127_8262308_4 domain, Protein - - - 0.000003667 57.0
BYD3_k127_8277892_0 peptide catabolic process K01256 - 3.4.11.2 0.000001379 61.0
BYD3_k127_8284485_0 Pfam:KaiC K08482 - - 8.292e-245 770.0
BYD3_k127_8284485_1 Nickel-dependent hydrogenase - - - 2.259e-211 667.0
BYD3_k127_8284485_10 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000000000000000000004846 127.0
BYD3_k127_8284485_11 PFAM KaiB domain K08481 - - 0.00000000000000000000000000002832 120.0
BYD3_k127_8284485_12 COGs COG2823 periplasmic or secreted lipoprotein - - - 0.000000000000000000476 93.0
BYD3_k127_8284485_13 Peptidase family M28 - - - 0.00002489 53.0
BYD3_k127_8284485_2 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 543.0
BYD3_k127_8284485_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 478.0
BYD3_k127_8284485_4 NADH ubiquinone oxidoreductase, 20 Kd subunit K18007 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 400.0
BYD3_k127_8284485_5 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 375.0
BYD3_k127_8284485_6 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007673 356.0
BYD3_k127_8284485_7 cyclic nucleotide binding K10914 - - 0.00000000000000000000000000000000000000000000000000000001256 202.0
BYD3_k127_8284485_8 KaiB K08481 - - 0.000000000000000000000000000000000000000000506 159.0
BYD3_k127_8284485_9 Hydrogenase maturation protease - - - 0.000000000000000000000000000000000000009102 152.0
BYD3_k127_82953_0 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 432.0
BYD3_k127_8308805_0 PhoPQ-activated pathogenicity-related protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005142 494.0
BYD3_k127_8308805_1 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 373.0
BYD3_k127_8308805_2 TIGRFAM TonB K03832 - - 0.000000000000000000117 100.0
BYD3_k127_8308805_3 peptidyl-tyrosine sulfation - - - 0.000000007367 66.0
BYD3_k127_831193_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.861e-274 857.0
BYD3_k127_831193_1 D-Tyr-tRNA(Tyr) deacylase K07560 - - 0.00000000000000000000000000000000000000000000000000000005224 201.0
BYD3_k127_831193_2 Protein of unknown function (DUF2589) - - - 0.0000000000000000000000000000000001527 139.0
BYD3_k127_831193_3 transcriptional regulator - - - 0.00000000000000000000000000003117 122.0
BYD3_k127_831193_4 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000001699 81.0
BYD3_k127_831193_5 - - - - 0.0000000000003878 79.0
BYD3_k127_831193_6 Protein of unknown function (DUF2589) - - - 0.00001764 55.0
BYD3_k127_8312267_0 cellulose binding - - - 4.516e-281 895.0
BYD3_k127_8312267_1 gluconolactonase activity K14274,K20274 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 492.0
BYD3_k127_8312267_10 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000009548 147.0
BYD3_k127_8312267_12 Protein of unknown function, DUF255 - - - 0.0000000000000000000146 102.0
BYD3_k127_8312267_2 Cys/Met metabolism PLP-dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 464.0
BYD3_k127_8312267_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 365.0
BYD3_k127_8312267_4 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 295.0
BYD3_k127_8312267_5 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000239 269.0
BYD3_k127_8312267_6 Belongs to the metal hydrolase YfiT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000003454 239.0
BYD3_k127_8312267_7 Damage-inducible protein DinB - - - 0.000000000000000000000000000000000000000000000000000000000000001091 222.0
BYD3_k127_8312267_8 Zn_pept K05996 - 3.4.17.18 0.000000000000000000000000000000000000000000000000000000000000001842 246.0
BYD3_k127_8312267_9 EamA-like transporter family K07790 - - 0.00000000000000000000000000000000000000000001209 176.0
BYD3_k127_8312959_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 563.0
BYD3_k127_8312959_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 443.0
BYD3_k127_8325323_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 5.349e-219 694.0
BYD3_k127_8325323_1 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 483.0
BYD3_k127_8325323_2 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007288 476.0
BYD3_k127_8325323_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000008177 211.0
BYD3_k127_8325323_4 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000001143 192.0
BYD3_k127_8325323_5 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000004069 116.0
BYD3_k127_8329093_0 sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001343 264.0
BYD3_k127_8329093_1 Periplasmic protein involved in polysaccharide export K01991 - - 0.0000000000007082 74.0
BYD3_k127_8334088_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 293.0
BYD3_k127_8334088_1 peptidyl-tyrosine sulfation - - - 0.00000004384 64.0
BYD3_k127_8346923_0 sequence-specific DNA binding K01697,K01738 GO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0016020,GO:0019842,GO:0030170,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0071944,GO:0097159,GO:1901363 2.5.1.47,4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009134 561.0
BYD3_k127_8360638_0 Fungal trichothecene efflux pump (TRI12) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001221 278.0
BYD3_k127_8360638_1 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000003771 183.0
BYD3_k127_8360638_2 serine-type peptidase activity K01303 - 3.4.19.1 0.000000000000000000000000000000000000000000001158 169.0
BYD3_k127_8360638_3 COG0346 Lactoylglutathione lyase and related lyases - - - 0.0000000000000795 77.0
BYD3_k127_8361202_0 Domain of unknown function (DUF4070) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 533.0
BYD3_k127_8361202_1 Lipocalin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006253 384.0
BYD3_k127_8361202_2 lipoprotein localization to outer membrane K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 304.0
BYD3_k127_8375070_0 PFAM von Willebrand factor type A - - - 0.00000000002599 75.0
BYD3_k127_8382215_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000001021 154.0
BYD3_k127_8382707_0 Beta-lactamase K01256,K17836 - 3.4.11.2,3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 313.0
BYD3_k127_8382707_1 - - - - 0.0000000000000000000000000000000003116 138.0
BYD3_k127_8382830_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 383.0
BYD3_k127_8383206_0 Maltogenic Amylase, C-terminal domain K05341,K05343 - 2.4.1.4,3.2.1.1,5.4.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 459.0
BYD3_k127_8383206_1 Domain of unknown function (DUF389) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 442.0
BYD3_k127_838913_0 FG-GAP repeat - - - 0.00000000000000000000000000000000000000004728 173.0
BYD3_k127_838913_1 Cold shock protein K03704 - - 0.00000000000000000000000145 105.0
BYD3_k127_8394264_0 AAA-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 565.0
BYD3_k127_8394264_1 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004372 491.0
BYD3_k127_8394264_2 PFAM Archaeal ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 456.0
BYD3_k127_8394264_3 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000002275 221.0
BYD3_k127_8394264_4 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000001631 180.0
BYD3_k127_8394269_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 5.19e-264 830.0
BYD3_k127_8394269_1 transcription factor binding K02584,K12146,K12266,K15836,K21009 GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001150,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0042802,GO:0043170,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 422.0
BYD3_k127_8394269_2 PFAM secretion protein HlyD family protein K01993,K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009878 394.0
BYD3_k127_8394269_3 Transport permease protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 367.0
BYD3_k127_8394269_4 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 369.0
BYD3_k127_8395365_0 cation diffusion facilitator family transporter K16264 GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007411 271.0
BYD3_k127_8395365_1 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000007001 250.0
BYD3_k127_8395365_2 PFAM peptidylprolyl isomerase FKBP-type K01802,K03772 - 5.2.1.8 0.00000000000000000000000000000000000000000000021 178.0
BYD3_k127_8395365_3 PFAM Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000006451 172.0
BYD3_k127_8395365_4 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000001511 107.0
BYD3_k127_8405950_0 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000005928 182.0
BYD3_k127_8405950_1 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000000008273 158.0
BYD3_k127_8407276_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 483.0
BYD3_k127_8407276_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 400.0
BYD3_k127_8407276_2 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000002963 140.0
BYD3_k127_8409998_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000002087 224.0
BYD3_k127_8409998_1 MacB-like periplasmic core domain - - - 0.000000000000002414 80.0
BYD3_k127_8412347_0 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000001051 213.0
BYD3_k127_8412347_1 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000003815 79.0
BYD3_k127_8435761_0 Two component, sigma54 specific, transcriptional regulator, Fis family K07713,K07714,K19641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 470.0
BYD3_k127_8435761_1 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 - 4.4.1.1,4.4.1.2,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 364.0
BYD3_k127_8435761_2 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000001161 208.0
BYD3_k127_8437608_0 aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 602.0
BYD3_k127_8437608_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 297.0
BYD3_k127_8437608_2 Metallo-beta-lactamase superfamily - - - 0.0005723 46.0
BYD3_k127_843997_0 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002665 284.0
BYD3_k127_843997_1 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000004092 164.0
BYD3_k127_843997_2 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000003145 129.0
BYD3_k127_8442153_0 Carboxypeptidase regulatory-like domain - - - 3.235e-285 914.0
BYD3_k127_8442153_1 amino acid K03294,K19540 GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006040,GO:0006082,GO:0006520,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009056,GO:0009063,GO:0009987,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0016054,GO:0019752,GO:0022804,GO:0022857,GO:0030389,GO:0030392,GO:0030393,GO:0031224,GO:0031226,GO:0034220,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044425,GO:0044459,GO:0044464,GO:0046348,GO:0046395,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0098656,GO:1901135,GO:1901136,GO:1901281,GO:1901564,GO:1901565,GO:1901575,GO:1902475,GO:1903825,GO:1905039 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008251 577.0
BYD3_k127_8442153_2 enterobactin catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 523.0
BYD3_k127_8442153_3 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000162 274.0
BYD3_k127_8442153_4 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005203 258.0
BYD3_k127_8442153_5 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002016 249.0
BYD3_k127_8442153_6 - - - - 0.0000000000000000000000000000000000000000000000004265 184.0
BYD3_k127_8442153_7 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000000000003113 152.0
BYD3_k127_8442153_8 PFAM Prolyl oligopeptidase family - - - 0.000000000006014 66.0
BYD3_k127_8445955_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007491 380.0
BYD3_k127_8445955_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003706 280.0
BYD3_k127_8446091_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 469.0
BYD3_k127_8446091_1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain - - - 0.0000000000000000000000000000000000000000000000000000002553 198.0
BYD3_k127_8446091_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000008005 120.0
BYD3_k127_8453380_0 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 449.0
BYD3_k127_8453380_1 Highly conserved protein containing a thioredoxin domain K20948 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 304.0
BYD3_k127_8453380_2 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.0000000000000000000000000000003966 128.0
BYD3_k127_8458870_0 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000684 248.0
BYD3_k127_8458870_1 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.000000000000000000000000000000007373 140.0
BYD3_k127_8475327_0 Sigma-54 interaction domain K07714 - - 0.000000000000000000000000000000000000000000000000001762 189.0
BYD3_k127_8475327_1 response regulator receiver - - - 0.00000000000000000000000000000000000004538 144.0
BYD3_k127_8475639_0 Urocanase Rossmann-like domain K01712 - 4.2.1.49 5.282e-252 784.0
BYD3_k127_8483863_0 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000006776 245.0
BYD3_k127_8483863_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD - - - 0.000000000000007428 86.0
BYD3_k127_8492446_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 351.0
BYD3_k127_8492446_1 Hydrolases of the alpha beta superfamily K06889 - - 0.0000007356 60.0
BYD3_k127_849677_0 - - - - 0.000000000000000000000000000000159 139.0
BYD3_k127_8500174_0 Dienelactone hydrolase family - - - 8.314e-285 891.0
BYD3_k127_8500174_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 599.0
BYD3_k127_8500174_2 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000721 502.0
BYD3_k127_8508212_0 enoyl-CoA hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008723 294.0
BYD3_k127_8508212_1 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000004446 143.0
BYD3_k127_8511698_0 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000003948 237.0
BYD3_k127_8511698_1 Bacterial protein of unknown function (DUF937) - - - 0.0000000000000003111 81.0
BYD3_k127_8518128_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 366.0
BYD3_k127_8518128_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993,K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 326.0
BYD3_k127_8518128_2 ABC transporter K02003,K09814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 295.0
BYD3_k127_8523010_0 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000006149 205.0
BYD3_k127_8525914_0 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 535.0
BYD3_k127_8525914_1 Mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009972 366.0
BYD3_k127_8525914_2 MgtC family K07507 - - 0.0000000000000000000000000000000000000000000002263 176.0
BYD3_k127_8526062_0 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 301.0
BYD3_k127_8526062_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000009693 248.0
BYD3_k127_8526062_2 PFAM binding-protein-dependent transport systems inner membrane component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000002452 244.0
BYD3_k127_8526062_3 ATPases associated with a variety of cellular activities K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000003575 227.0
BYD3_k127_8526062_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000000001088 145.0
BYD3_k127_8526062_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000006772 151.0
BYD3_k127_8529589_0 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005862 332.0
BYD3_k127_8529589_1 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000003832 216.0
BYD3_k127_8531951_0 PFAM cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 388.0
BYD3_k127_8533854_0 electron transfer activity K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009393 491.0
BYD3_k127_8533854_1 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 425.0
BYD3_k127_8533854_2 PHP-associated - - - 0.00000004849 63.0
BYD3_k127_8542854_0 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 3.553e-208 658.0
BYD3_k127_8542854_1 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 520.0
BYD3_k127_8542854_10 PFAM periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000001078 161.0
BYD3_k127_8542854_11 Mov34 MPN PAD-1 - - - 0.000000000000000000000000000000000001035 143.0
BYD3_k127_8542854_12 Domain of unknown function (DUF309) K09763 - - 0.0000000000001483 80.0
BYD3_k127_8542854_13 (FHA) domain - - - 0.00000000003292 73.0
BYD3_k127_8542854_2 Pyridoxal-phosphate dependent enzyme K12339,K21148 - 2.5.1.113,2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 443.0
BYD3_k127_8542854_3 4Fe-4S binding domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 396.0
BYD3_k127_8542854_4 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 318.0
BYD3_k127_8542854_5 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004623 290.0
BYD3_k127_8542854_6 FAD binding domain K11472 - - 0.00000000000000000000000000000000000000000000000000000000000000001817 240.0
BYD3_k127_8542854_7 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000006166 211.0
BYD3_k127_8542854_8 translation initiation inhibitor, yjgF family K04782 - 4.2.99.21 0.000000000000000000000000000000000000000000000000001172 187.0
BYD3_k127_8542854_9 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000005722 166.0
BYD3_k127_8566251_0 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000135 251.0
BYD3_k127_8575286_0 proline dipeptidase activity K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 424.0
BYD3_k127_8575286_1 Belongs to the UPF0145 family - - - 0.000000000000000000000000000000000000000001838 160.0
BYD3_k127_8575286_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000006528 144.0
BYD3_k127_8578881_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 392.0
BYD3_k127_8578881_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 372.0
BYD3_k127_8578881_2 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 366.0
BYD3_k127_8578881_3 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 371.0
BYD3_k127_8578881_4 Belongs to the folylpolyglutamate synthase family K11754 GO:0003674,GO:0003824,GO:0004326,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006761,GO:0006807,GO:0008150,GO:0008152,GO:0008841,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046452,GO:0046483,GO:0046900,GO:0046901,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 301.0
BYD3_k127_8578881_5 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000005274 189.0
BYD3_k127_8578881_6 nUDIX hydrolase K01515 - 3.6.1.13 0.0000000000000000000000000000004215 129.0
BYD3_k127_8578881_7 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000002952 81.0
BYD3_k127_8585954_0 ATPase activity K01990 - - 0.0000000000000000000000000000000000001092 144.0
BYD3_k127_8585954_1 - - - - 0.0000000000000000000000000000000004551 150.0
BYD3_k127_8592771_0 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 430.0
BYD3_k127_8592771_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 334.0
BYD3_k127_8592771_2 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000003509 139.0
BYD3_k127_8592771_3 Protein of unknown function (DUF3311) - - - 0.0000000000005512 71.0
BYD3_k127_8597260_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 572.0
BYD3_k127_8605060_0 Belongs to the ClpA ClpB family K03696 - - 0.0 1109.0
BYD3_k127_8605060_1 ABC-type transport system involved in lipoprotein release permease component K02004,K09808 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008104,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0034613,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0098796,GO:0098797,GO:1990778 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008487 331.0
BYD3_k127_8605060_2 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005298 263.0
BYD3_k127_8605060_3 cell redox homeostasis - - - 0.000000000000000000000000000000001168 145.0
BYD3_k127_8613651_0 Monooxygenase fad-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 455.0
BYD3_k127_8613651_1 Fibronectin type 3 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 357.0
BYD3_k127_8617553_0 Trehalose utilisation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 426.0
BYD3_k127_8617553_1 Protein of unknown function (DUF2911) - - - 0.0000000000000000001799 94.0
BYD3_k127_8619324_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006497 451.0
BYD3_k127_8619324_1 -O-antigen K02847 - - 0.0000004001 63.0
BYD3_k127_8621179_0 Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003652 612.0
BYD3_k127_8621179_1 Domain of unknown function (DUF3471) K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009935 512.0
BYD3_k127_8621179_2 Putative serine dehydratase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 454.0
BYD3_k127_8621179_3 Involved in the heme and chlorophyll biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 317.0
BYD3_k127_8621179_4 Tyrosine phosphatase family - - - 0.00000000000000000000000000000000000000005791 158.0
BYD3_k127_8621179_5 Tyrosine phosphatase family - - - 0.000000000000000000000002265 110.0
BYD3_k127_8621179_6 Hemerythrin HHE cation binding domain - - - 0.00000000000000000007047 94.0
BYD3_k127_8626041_0 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000005363 204.0
BYD3_k127_8626041_1 Transcriptional regulator, LysR family - - - 0.00000000000000000000000000000000009485 140.0
BYD3_k127_8638738_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005203 311.0
BYD3_k127_8638738_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000288 258.0
BYD3_k127_8638738_2 tRNA 3'-trailer cleavage K00784,K01120 - 3.1.26.11,3.1.4.17 0.000000000000000000000000000000000000000000000000000000000000000003458 236.0
BYD3_k127_8646721_0 serine-type peptidase activity - - - 5.758e-251 799.0
BYD3_k127_8646721_1 AcrB/AcrD/AcrF family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 399.0
BYD3_k127_8646721_2 AcrB/AcrD/AcrF family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000073 327.0
BYD3_k127_8646721_3 OsmC-like protein K07397 - - 0.0000000000000000000000000000009402 126.0
BYD3_k127_8646721_4 Biotin-lipoyl like - - - 0.0001528 51.0
BYD3_k127_8650917_0 glycosyl transferase family 2 - - - 8.997e-227 716.0
BYD3_k127_8650917_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004677 604.0
BYD3_k127_8650917_2 PFAM ABC transporter related K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 380.0
BYD3_k127_8650917_3 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 362.0
BYD3_k127_8650917_4 PFAM ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005628 271.0
BYD3_k127_8650917_5 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000001484 149.0
BYD3_k127_8650917_6 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000004832 129.0
BYD3_k127_8650917_7 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.00000000008043 72.0
BYD3_k127_8669147_0 efflux transmembrane transporter activity K02004 - - 5.171e-226 725.0
BYD3_k127_8669147_1 FtsX-like permease family - - - 8.084e-218 707.0
BYD3_k127_8669147_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003349 282.0
BYD3_k127_8669147_3 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000001141 199.0
BYD3_k127_8669147_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000004199 171.0
BYD3_k127_8669147_5 DoxX-like family - - - 0.000000000000000000000000000000000000007634 149.0
BYD3_k127_8669147_6 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000009567 144.0
BYD3_k127_8669147_7 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000004125 120.0
BYD3_k127_8671532_0 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 542.0
BYD3_k127_8671532_1 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000613 240.0
BYD3_k127_8671532_2 GlcNAc-PI de-N-acetylase K22135 - - 0.00000000000000000000000000000000001141 152.0
BYD3_k127_867166_0 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000002706 215.0
BYD3_k127_867166_1 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000003786 147.0
BYD3_k127_8681899_0 Beta-eliminating lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 342.0
BYD3_k127_8681899_1 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.00000000000000000000000000000000000000000000005109 171.0
BYD3_k127_868721_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 397.0
BYD3_k127_868721_1 Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000000000000000000000000002488 197.0
BYD3_k127_868721_2 Glycosyl transferase, family 9 K02849 - - 0.000000000000000000000000000000000000003531 161.0
BYD3_k127_868721_3 - - - - 0.000000000000000000000000000002917 137.0
BYD3_k127_8695577_0 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000007258 263.0
BYD3_k127_8695577_1 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000000000000000001778 186.0
BYD3_k127_8695577_2 PFAM Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000001626 182.0
BYD3_k127_8695577_3 PFAM major facilitator superfamily MFS_1 K08223 - - 0.0000000000000000000000000000000000000000000001691 184.0
BYD3_k127_8701153_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 430.0
BYD3_k127_870155_0 ATPases associated with a variety of cellular activities K06147 - - 1.631e-227 721.0
BYD3_k127_870155_1 Uncharacterised nucleotidyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006283 265.0
BYD3_k127_870155_2 - - - - 0.00000000000000000000000000000000000000000000000000008335 201.0
BYD3_k127_8703912_0 Putative adhesin - - - 0.000000000000000994 83.0
BYD3_k127_8703912_1 - - - - 0.000144 50.0
BYD3_k127_8712269_0 His Kinase A (phosphoacceptor) domain K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 475.0
BYD3_k127_8721402_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 306.0
BYD3_k127_8721402_1 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000001626 226.0
BYD3_k127_8721402_2 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000000000000000000000000000000000000003681 211.0
BYD3_k127_8721402_3 Roadblock/LC7 domain - - - 0.000000000000000968 82.0
BYD3_k127_8721402_4 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000094 59.0
BYD3_k127_8726192_0 Alkaline phosphatase homologues K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004231 606.0
BYD3_k127_8726192_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006488 514.0
BYD3_k127_8726192_2 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008753 475.0
BYD3_k127_8726192_3 Integral membrane protein TerC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006598 337.0
BYD3_k127_8726192_4 protein kinase related protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 322.0
BYD3_k127_8726192_5 Iron-containing alcohol dehydrogenase K00001,K13954 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000169 275.0
BYD3_k127_8726192_6 aminopeptidase K19689 - - 0.0000000000000009258 89.0
BYD3_k127_872940_0 Fungal family of unknown function (DUF1776) - - - 0.00000000000000000000000000001341 122.0
BYD3_k127_8729649_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000002468 171.0
BYD3_k127_8729649_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117,K03646 - - 0.0000000000002715 74.0
BYD3_k127_8729649_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000007043 55.0
BYD3_k127_874273_0 domain protein - - - 0.00000000000000000000009054 113.0
BYD3_k127_874273_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000003265 86.0
BYD3_k127_874273_2 domain protein K14194 - - 0.0000003984 63.0
BYD3_k127_874273_3 Carboxypeptidase regulatory-like domain - - - 0.000009392 54.0
BYD3_k127_8742786_0 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000004275 164.0
BYD3_k127_8742786_1 CDP-glycerol poly(glycerophosphate) glycerophosphotransferase K09809 - 2.7.8.12 0.000000000006326 76.0
BYD3_k127_8745763_0 nickel-dependent hydrogenase, large subunit K06281 - 1.12.99.6 2.432e-275 855.0
BYD3_k127_8745763_1 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 394.0
BYD3_k127_8745763_2 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.00000000000000000000000000001301 121.0
BYD3_k127_8745763_3 Protein conserved in bacteria - - - 0.0000000000000000007453 89.0
BYD3_k127_8750824_0 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000003246 199.0
BYD3_k127_8750824_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000009981 176.0
BYD3_k127_8753540_0 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000008603 138.0
BYD3_k127_8753540_1 Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000000000000009154 124.0
BYD3_k127_8754889_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000001586 186.0
BYD3_k127_8754889_1 PFAM Glycosyl transferase, group 1 K00754 - - 0.0000000000000000000000000000000002596 147.0
BYD3_k127_8754889_2 polysaccharide biosynthetic process K06409 - - 0.000000000000000002248 93.0
BYD3_k127_8754889_3 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0001038 55.0
BYD3_k127_8774532_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 3.777e-280 884.0
BYD3_k127_8774532_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 475.0
BYD3_k127_8774532_10 lysine biosynthesis protein LysW K05826 - - 0.000000009491 58.0
BYD3_k127_8774532_12 - - - - 0.000458 48.0
BYD3_k127_8774532_2 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 322.0
BYD3_k127_8774532_3 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000007916 267.0
BYD3_k127_8774532_4 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000005582 214.0
BYD3_k127_8774532_5 - - - - 0.000000000000000000000000000000000000000000000000005852 186.0
BYD3_k127_8774532_6 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000005524 140.0
BYD3_k127_8774532_7 tRNA 3'-trailer cleavage K00784 - 3.1.26.11 0.00000000000000000000000175 107.0
BYD3_k127_8774532_8 PFAM PhoD-like phosphatase - - - 0.0000000000000006435 80.0
BYD3_k127_8774532_9 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 - 3.1.26.11 0.0000000000005159 70.0
BYD3_k127_877727_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 594.0
BYD3_k127_877727_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008864 456.0
BYD3_k127_8780610_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 2.278e-207 662.0
BYD3_k127_8796059_0 Aldehyde dehydrogenase family K00128,K00130 - 1.2.1.3,1.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005735 498.0
BYD3_k127_8796059_1 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000855 361.0
BYD3_k127_8796059_2 Putative adhesin - - - 0.0008117 51.0
BYD3_k127_8800705_0 PLD-like domain K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 529.0
BYD3_k127_8800705_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 417.0
BYD3_k127_8800705_2 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 403.0
BYD3_k127_8800705_3 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III C terminal K01641 - 2.3.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 301.0
BYD3_k127_8800705_4 Acyl dehydratase - - - 0.0000000000000000000000000000000000000000000000000000001979 197.0
BYD3_k127_8800705_5 dehydratase - - - 0.000000000000000000000000000000000000000000000007507 182.0
BYD3_k127_8800705_6 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000002873 89.0
BYD3_k127_8800705_7 - - - - 0.00000000000002915 87.0
BYD3_k127_8806154_0 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 489.0
BYD3_k127_8806154_1 Belongs to the PdxS SNZ family K06215 - 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 429.0
BYD3_k127_8806154_2 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 411.0
BYD3_k127_8806154_3 Alanine-glyoxylate amino-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004888 394.0
BYD3_k127_8806154_4 PFAM Phenazine biosynthesis PhzC PhzF protein K06998 - 5.3.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000231 269.0
BYD3_k127_8806154_5 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000002967 235.0
BYD3_k127_8806154_6 Domain of unknown function (DUF389) - - - 0.000000000000000000000000000000000211 139.0
BYD3_k127_8806154_7 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.00004567 47.0
BYD3_k127_8811920_0 RimK-like ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 604.0
BYD3_k127_8811920_1 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009262 301.0
BYD3_k127_8811920_2 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000106 263.0
BYD3_k127_8821404_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 320.0
BYD3_k127_8821404_1 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000003261 115.0
BYD3_k127_8821404_2 - - - - 0.00000000000000000008651 94.0
BYD3_k127_8821520_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 537.0
BYD3_k127_8834317_0 efflux transmembrane transporter activity - - - 9.784e-212 683.0
BYD3_k127_8834317_1 Beta-lactamase class C and other penicillin binding K01286 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 299.0
BYD3_k127_8834317_2 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001805 288.0
BYD3_k127_8834317_3 protocatechuate 3,4-dioxygenase activity K00449 - 1.13.11.3 0.000000000000000000000000000006176 125.0
BYD3_k127_8834317_4 DoxX K15977 - - 0.0000000000000000000177 96.0
BYD3_k127_8837556_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 327.0
BYD3_k127_8837556_1 two component, sigma54 specific, transcriptional regulator, Fis family K10943 - - 0.0000000001956 64.0
BYD3_k127_8837556_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0006493 51.0
BYD3_k127_8838258_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.234e-213 679.0
BYD3_k127_8838258_1 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 452.0
BYD3_k127_8838258_2 PFAM Haloacid dehalogenase domain protein hydrolase K01560,K07025 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000006138 258.0
BYD3_k127_8838258_3 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000187 228.0
BYD3_k127_8838258_4 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000002277 207.0
BYD3_k127_8838258_5 Redoxin - - - 0.000000000000000000000000000002243 126.0
BYD3_k127_8839288_0 histidine kinase A domain protein - - - 1.459e-224 732.0
BYD3_k127_8839288_1 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008628 381.0
BYD3_k127_8839288_2 response regulator K07685 - - 0.000000000000000000000000000000000000000000000001404 181.0
BYD3_k127_8851848_0 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 - - 0.0000000000000000000000000000000000001206 149.0
BYD3_k127_8851848_1 chaperone-mediated protein folding - - - 0.0000000000000001 91.0
BYD3_k127_8851848_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00003793 54.0
BYD3_k127_8852068_0 Anion-transporting ATPase - - - 0.000000000000000000000000000003143 124.0
BYD3_k127_8852068_1 Anion-transporting ATPase - - - 0.000000000000000000000006737 104.0
BYD3_k127_8852068_2 - - - - 0.0000946 50.0
BYD3_k127_8852374_0 Peptidase family S58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 476.0
BYD3_k127_8852374_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008201 320.0
BYD3_k127_8852374_2 NAD dependent epimerase/dehydratase family - - - 0.0000000000000000000000000000000000008982 153.0
BYD3_k127_8852374_3 Ami_2 - - - 0.00000089 51.0
BYD3_k127_885616_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1047.0
BYD3_k127_885616_1 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 357.0
BYD3_k127_885616_2 - K00241 - - 0.00000000000000000000000005673 111.0
BYD3_k127_8870047_0 - - - - 0.00000000000004696 83.0
BYD3_k127_8870524_0 Transcriptional regulator crp fnr family K10914 - - 0.0000000000000000000000000000000001784 141.0
BYD3_k127_8870631_0 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000002184 125.0
BYD3_k127_8870631_1 - - - - 0.000002712 57.0
BYD3_k127_8872254_0 Tetratricopeptide repeat - - - 0.000000000000000000002409 106.0
BYD3_k127_8883559_0 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007282 340.0
BYD3_k127_8883559_1 AP2 domain - - - 0.0000000000000000003118 89.0
BYD3_k127_8889745_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 482.0
BYD3_k127_8889745_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000009032 183.0
BYD3_k127_8889745_2 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000919 133.0
BYD3_k127_8898115_0 NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005427 599.0
BYD3_k127_8898115_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 540.0
BYD3_k127_8898115_2 Proton-conducting membrane transporter K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 433.0
BYD3_k127_8898115_3 4Fe-4S dicluster domain K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000009838 171.0
BYD3_k127_8898115_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000001375 141.0
BYD3_k127_8898115_5 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K00340 - 1.6.5.3 0.00000000000000000000000001533 113.0
BYD3_k127_8898115_6 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000002683 101.0
BYD3_k127_893558_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 331.0
BYD3_k127_893558_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000009661 114.0
BYD3_k127_8935955_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 394.0
BYD3_k127_8935955_1 N-Acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000000000000000312 231.0
BYD3_k127_8937634_0 nucleotide metabolic process - - - 0.0000000000000000000000000000000000000000000000000000000238 206.0
BYD3_k127_8937634_1 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000000003601 194.0
BYD3_k127_8937634_2 Belongs to the UPF0102 family K07460 - - 0.000000003694 61.0
BYD3_k127_8951912_0 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005962 377.0
BYD3_k127_8961180_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 422.0
BYD3_k127_8961180_1 PFAM Histidine triad (HIT) protein K02503 - - 0.000000000000000000000893 97.0
BYD3_k127_8962849_0 Baseplate J-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008742 342.0
BYD3_k127_8962849_1 protein, phage tail-like region - - - 0.0000000000000000000000000000000000000000000000000000000000000302 225.0
BYD3_k127_896648_0 Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 302.0
BYD3_k127_896648_1 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000002474 107.0
BYD3_k127_8971278_0 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 477.0
BYD3_k127_8971278_1 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 437.0
BYD3_k127_8979645_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 4.005e-217 704.0
BYD3_k127_8979645_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 490.0
BYD3_k127_8979645_2 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 319.0
BYD3_k127_8979645_3 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000004496 182.0
BYD3_k127_8979645_4 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000009899 164.0
BYD3_k127_8979645_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000001533 113.0
BYD3_k127_898696_0 Ftsk_gamma K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 603.0
BYD3_k127_898696_1 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 380.0
BYD3_k127_898696_2 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.000000000000000000000000000000000000000000000000000001701 201.0
BYD3_k127_8989605_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000006681 235.0
BYD3_k127_8989605_1 Helix-turn-helix - - - 0.0002483 50.0
BYD3_k127_899067_0 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000002632 98.0
BYD3_k127_899067_1 Psort location CytoplasmicMembrane, score K00368 - 1.7.2.1 0.00000000000000002319 96.0
BYD3_k127_9001583_0 ASPIC and UnbV - - - 6.339e-221 701.0
BYD3_k127_9001583_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000003169 166.0
BYD3_k127_9001583_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000004836 156.0
BYD3_k127_9001583_3 PEP-CTERM system TPR-repeat lipoprotein - - - 0.00000000000000005429 94.0
BYD3_k127_9013379_0 MgsA AAA+ ATPase C terminal K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 477.0
BYD3_k127_9013379_1 OsmC-like protein K06889,K07397 - - 0.000000000000000000000000000000000000000000002274 168.0
BYD3_k127_9013379_2 Uncharacterised protein family UPF0047 - - - 0.000002137 51.0
BYD3_k127_9029351_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 601.0
BYD3_k127_903139_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 618.0
BYD3_k127_903139_1 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.000000000000000000000000000000000000000000000000000001863 196.0
BYD3_k127_9034956_0 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.0 1669.0
BYD3_k127_9034956_1 4 iron, 4 sulfur cluster binding - - - 1.019e-246 774.0
BYD3_k127_9034956_2 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001011 276.0
BYD3_k127_9035822_0 Peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 464.0
BYD3_k127_9035822_1 Cell shape determining protein MreB Mrl K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 296.0
BYD3_k127_9035822_2 LmbE family - - - 0.0000000000000000000000000000002882 124.0
BYD3_k127_9035822_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000001317 122.0
BYD3_k127_903607_0 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 417.0
BYD3_k127_903607_1 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000003386 206.0
BYD3_k127_903607_2 - - - - 0.00000000000000000000000001421 123.0
BYD3_k127_903607_3 TIGRFAM diguanylate cyclase - - - 0.0000000000000000000000001754 120.0
BYD3_k127_903607_4 Transglycosylase associated protein - - - 0.000000000000000008223 86.0
BYD3_k127_903782_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 506.0
BYD3_k127_903782_1 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000009477 107.0
BYD3_k127_903782_2 Belongs to the UPF0109 family K06960 - - 0.00000000000000001839 83.0
BYD3_k127_9039502_0 Putative carbohydrate binding domain K12373 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 406.0
BYD3_k127_9043225_0 hydrolase, family 3 K05349 - 3.2.1.21 1.712e-286 898.0
BYD3_k127_9043225_1 Putative glucoamylase - - - 0.000000000000000000000000000000000000000000000002142 182.0
BYD3_k127_9044470_0 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 2.266e-195 626.0
BYD3_k127_9044470_1 PFAM cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000003453 258.0
BYD3_k127_9044470_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000001987 200.0
BYD3_k127_9044721_0 non-ribosomal peptide synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 498.0
BYD3_k127_9044721_1 PFAM Taurine catabolism dioxygenase TauD TfdA - - - 0.0000000000000000000000000000000000000000000000000000009918 196.0
BYD3_k127_9070772_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 358.0
BYD3_k127_9070772_1 oxidoreductase activity K12511 - - 0.000000000000000000000000000000000000000000000000000000001227 216.0
BYD3_k127_9070772_2 oxidoreductase activity K12511 - - 0.000000000000000000000000000000000000000000005881 177.0
BYD3_k127_9070772_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000004213 166.0
BYD3_k127_9070772_4 von Willebrand factor, type A - - - 0.000000000000000000000000000001232 133.0
BYD3_k127_9070772_5 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.000000005712 57.0
BYD3_k127_9073550_0 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 488.0
BYD3_k127_9083298_0 Tail protein - - - 0.00000000000000000000000000000000000000000877 171.0
BYD3_k127_9083298_1 domain, Protein - - - 0.0000000000000000000000009693 118.0
BYD3_k127_9085585_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 327.0
BYD3_k127_9088592_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000001943 195.0
BYD3_k127_9088592_1 PFAM Polysaccharide pyruvyl transferase - - - 0.00000000000000000000000000000000000000000004089 184.0
BYD3_k127_9088592_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000002146 118.0
BYD3_k127_908908_0 COG1228 Imidazolonepropionase and related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004468 441.0
BYD3_k127_908908_1 Thiamine pyrophosphate enzyme, central domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004398 230.0
BYD3_k127_9091429_0 PFAM NHL repeat containing protein - - - 0.0 1554.0
BYD3_k127_9091429_1 Peptidase family M20/M25/M40 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412 384.0
BYD3_k127_9091429_2 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 368.0
BYD3_k127_9091429_3 cAMP biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004603 357.0
BYD3_k127_9091429_4 - K07018 - - 0.00000000000000000000000000000000000000000000000000000005363 203.0
BYD3_k127_9091429_5 pilus organization - - - 0.0000000000000000000000000000000000000000002206 186.0
BYD3_k127_9091429_6 phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000000000000000000005715 126.0
BYD3_k127_9091429_7 Belongs to the peptidase S8 family - - - 0.00000000001883 80.0
BYD3_k127_909464_0 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002258 295.0
BYD3_k127_913244_0 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001682 285.0
BYD3_k127_914575_0 hydrogenase large subunit K06281 - 1.12.99.6 1.301e-265 830.0
BYD3_k127_914575_1 NiFe/NiFeSe hydrogenase small subunit C-terminal K05927,K06282 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009897,GO:0009986,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0019897,GO:0019898,GO:0022900,GO:0031224,GO:0031226,GO:0031232,GO:0031233,GO:0031236,GO:0031237,GO:0032991,GO:0042597,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044569,GO:0045333,GO:0048037,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071944,GO:0098552,GO:0098567,GO:1902494 1.12.5.1,1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003817 454.0
BYD3_k127_914575_2 EthD domain - - - 0.000000000000000000000000000002082 121.0
BYD3_k127_921203_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003799 307.0
BYD3_k127_921203_1 RNA polymerase sigma factor K03088 - - 0.000000000000000000000000000000000000000000002979 173.0
BYD3_k127_921203_2 Putative adhesin - - - 0.00000000000000000000000003572 124.0
BYD3_k127_921203_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000008094 93.0
BYD3_k127_921203_4 - - - - 0.000000006767 65.0
BYD3_k127_922143_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 529.0
BYD3_k127_922143_1 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003832 279.0
BYD3_k127_922632_0 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 479.0
BYD3_k127_922632_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 430.0
BYD3_k127_922632_2 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000002687 241.0
BYD3_k127_922632_3 Domain of unknown function (DUF4149) - - - 0.0000000000000004997 85.0
BYD3_k127_924713_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000867 422.0
BYD3_k127_924713_1 outer membrane autotransporter barrel domain protein - - - 0.00000000000000000006252 91.0
BYD3_k127_924713_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0001134 46.0
BYD3_k127_926418_0 Transcriptional regulator K06921 - - 1.697e-227 735.0
BYD3_k127_926418_1 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 301.0
BYD3_k127_926418_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 293.0
BYD3_k127_926418_3 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000003865 153.0
BYD3_k127_926418_4 - - - - 0.000000000000003413 82.0
BYD3_k127_926418_5 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00005972 45.0
BYD3_k127_93268_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008234 483.0
BYD3_k127_93268_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000001438 252.0
BYD3_k127_93268_10 Transcriptional regulator PadR-like family - - - 0.000003223 51.0
BYD3_k127_93268_11 4 iron, 4 sulfur cluster binding - - - 0.0000926 49.0
BYD3_k127_93268_2 DoxX - - - 0.000000000000000000000000000000000000000000000000000000000001847 213.0
BYD3_k127_93268_3 Domain of unknown function (DUF374) K09778 - - 0.00000000000000000000000000000000000000000000000000002582 196.0
BYD3_k127_93268_4 lipid kinase, YegS Rv2252 BmrU family - - - 0.000000000000000000000000000000000000000000000000001867 194.0
BYD3_k127_93268_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000003725 131.0
BYD3_k127_93268_6 methyltransferase - - - 0.000000000000000000000000001667 121.0
BYD3_k127_93268_7 Pfam Hemerythrin HHE cation binding domain - - - 0.000000000000000000000003229 104.0
BYD3_k127_93268_8 cytochrome C peroxidase K00428 - 1.11.1.5 0.0000000000000000000001531 102.0
BYD3_k127_932756_0 Formiminotransferase-cyclodeaminase K00603,K01746,K13990 - 2.1.2.5,4.3.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 391.0
BYD3_k127_932756_1 PFAM Collagen-binding surface protein Cna-like, B-type domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 392.0
BYD3_k127_932756_2 Enoyl-CoA hydratase/isomerase K01715,K07537 - 4.2.1.100,4.2.1.17 0.0000000000000000000000000000000000000000000000001962 183.0
BYD3_k127_932756_3 PFAM Formiminotransferase-cyclodeaminase - - - 0.0000000000000000000000000001216 124.0
BYD3_k127_932756_5 Bacterial Ig-like domain (group 3) - - - 0.00005897 57.0
BYD3_k127_940618_0 PFAM NHL repeat containing protein - - - 0.0 1677.0
BYD3_k127_940618_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 425.0
BYD3_k127_940618_2 Peptidase dimerisation domain protein K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008328 362.0
BYD3_k127_940618_3 Belongs to the ClpA ClpB family K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 377.0
BYD3_k127_940618_4 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000000003995 206.0
BYD3_k127_940618_5 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000000000000007115 181.0
BYD3_k127_940618_6 Subtilase family - - - 0.000000000000000000000002289 123.0
BYD3_k127_940618_7 Putative bacterial sensory transduction regulator - - - 0.000000000000000000001763 100.0
BYD3_k127_940618_8 Thioredoxin-like - - - 0.0000235 53.0
BYD3_k127_942298_0 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003772 261.0
BYD3_k127_942298_1 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000003214 231.0
BYD3_k127_942298_2 MacB-like periplasmic core domain K09808 - - 0.000000000000000000000000000000000000000000000000000000002889 215.0
BYD3_k127_942298_3 - - - - 0.0000000000000000000000000000000000000001648 155.0
BYD3_k127_942298_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000003248 96.0
BYD3_k127_942298_5 beta-propeller repeat - - - 0.000009944 49.0
BYD3_k127_946976_0 PFAM glycosyl transferase family 39 - - - 0.0000000000000000000000000000000000000000000000000004132 204.0
BYD3_k127_946976_1 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000001262 134.0
BYD3_k127_946976_2 PFAM response regulator receiver K07657 - - 0.00000000000000000001361 96.0
BYD3_k127_946976_3 protocatechuate 3,4-dioxygenase activity - - - 0.0000000000000001309 84.0
BYD3_k127_946976_4 D-alanyl-D-alanine carboxypeptidase - - - 0.000000000007044 76.0
BYD3_k127_952082_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003554 273.0
BYD3_k127_952082_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000003284 93.0
BYD3_k127_954411_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 532.0
BYD3_k127_954411_1 Hfq protein - - - 0.00000000000000000000000000001498 121.0
BYD3_k127_954411_2 Pyridoxal phosphate biosynthetic protein PdxA K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000001113 117.0
BYD3_k127_963732_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 6.913e-226 716.0
BYD3_k127_963732_1 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 307.0
BYD3_k127_963732_2 Dimerisation domain - - - 0.0000000000000002992 79.0
BYD3_k127_963732_3 Exonuclease VII small subunit K03602 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 0.00000000000003457 78.0
BYD3_k127_963732_4 glutamine synthetase K01915 - 6.3.1.2 0.0000000006406 59.0
BYD3_k127_97057_0 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000002214 224.0
BYD3_k127_97057_1 deoxyhypusine monooxygenase activity K00627,K02160,K07402 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000007221 226.0
BYD3_k127_97057_2 4Fe-4S binding domain K00395,K02572,K03616 - 1.8.99.2 0.000000000000000000000000000000000000000000001097 167.0
BYD3_k127_97057_3 Transposase K07491 - - 0.000000000000000000000000000000000000000000008028 167.0
BYD3_k127_97057_4 Protein of unknown function (DUF420) - - - 0.00000000000000000000000000000000000000595 150.0
BYD3_k127_97057_5 PFAM cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000001608 138.0
BYD3_k127_97057_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000008844 51.0
BYD3_k127_976355_0 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 1.187e-203 639.0
BYD3_k127_976355_1 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008915 292.0
BYD3_k127_976355_2 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000001749 206.0
BYD3_k127_976355_3 Cupin domain - - - 0.000000000000000000000000000000004846 131.0
BYD3_k127_977993_0 NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit K05559,K05565 GO:0003674,GO:0005215,GO:0005451,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015491,GO:0015672,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0035725,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0098655,GO:0098660,GO:0098662,GO:0099516,GO:1902600 - 4.595e-265 837.0
BYD3_k127_977993_1 Sigma-54 interaction domain K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006765 406.0
BYD3_k127_977993_2 Exodeoxyribonuclease iii K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 304.0
BYD3_k127_977993_3 Short chain fatty acid transporter K02106 - - 0.0000000000000000000000000000000000000000000000000000000000000004454 238.0
BYD3_k127_977993_4 HAMP domain - - - 0.0000000000000000000000000000000000000000000000000000000000009567 229.0
BYD3_k127_977993_5 PFAM CBS domain containing protein - - - 0.000000000000000000002265 100.0
BYD3_k127_977993_6 - - - - 0.0000000000000000001942 92.0
BYD3_k127_977993_7 Na H antiporter, MnhB K05566 - - 0.000000000001022 76.0
BYD3_k127_977993_8 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00005936 47.0
BYD3_k127_978194_0 overlaps another CDS with the same product name - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 322.0
BYD3_k127_978194_1 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000000000000000000271 98.0
BYD3_k127_988066_0 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 391.0
BYD3_k127_988066_1 protein TIM barrel - - - 0.00000000000000000000000000005294 131.0
BYD3_k127_993071_0 Vault protein inter-alpha-trypsin domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 411.0
BYD3_k127_993529_0 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002335 253.0
BYD3_k127_993529_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000005743 144.0
BYD3_k127_993529_2 (Rhomboid) family - - - 0.0000000000000000000000000000000109 141.0
BYD3_k127_994151_0 SPTR MCP methyltransferase, CheR-type with PAS PAC sensor K00575,K13924 - 2.1.1.80,3.1.1.61 2.173e-215 683.0
BYD3_k127_994151_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007658 427.0
BYD3_k127_994151_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 407.0
BYD3_k127_994151_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000167 237.0
BYD3_k127_994151_4 PFAM CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000001978 198.0
BYD3_k127_994151_5 Protein conserved in bacteria K07011 - - 0.0000000000000000000000000000000000000000000000000009921 191.0
BYD3_k127_994151_6 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000003797 97.0
BYD3_k127_994151_7 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000008588 92.0
BYD3_k127_994151_8 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.0000000000392 66.0
BYD3_k127_996367_0 NADH dehydrogenase K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 430.0
BYD3_k127_996367_1 Proton-conducting membrane transporter K12137,K15828 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 320.0