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Overview

ID MAG00126
Name BYD3_bin.39
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Steroidobacterales
Family Steroidobacteraceae
Genus SCUD01
Species
Assembly information
Completeness (%) 92.47
Contamination (%) 4.54
GC content (%) 70.0
N50 (bp) 57,780
Genome size (bp) 2,989,266

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2693

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1248633_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 5.324e-290 897.0
BYD3_k127_1248633_1 TonB dependent receptor - - - 5.654e-260 835.0
BYD3_k127_1248633_10 Imidazolone-5-propionate hydrolase K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008333 443.0
BYD3_k127_1248633_11 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 413.0
BYD3_k127_1248633_12 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 386.0
BYD3_k127_1248633_13 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 376.0
BYD3_k127_1248633_14 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 347.0
BYD3_k127_1248633_15 Secreted protein, containing von Willebrand factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 320.0
BYD3_k127_1248633_16 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001736 292.0
BYD3_k127_1248633_17 von Willebrand factor (VWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007007 289.0
BYD3_k127_1248633_18 COG0811 Biopolymer transport proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002852 285.0
BYD3_k127_1248633_19 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003171 282.0
BYD3_k127_1248633_2 phosphoribosylamine-glycine ligase activity K01945,K01955 - 6.3.4.13,6.3.5.5 3.18e-203 639.0
BYD3_k127_1248633_20 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002897 265.0
BYD3_k127_1248633_21 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000195 260.0
BYD3_k127_1248633_22 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002994 265.0
BYD3_k127_1248633_23 NADPH-quinone reductase (modulator of drug activity B) - - - 0.0000000000000000000000000000000000000000000000000000000000000001526 226.0
BYD3_k127_1248633_24 Belongs to the pseudouridine synthase RsuA family K06178,K06181 - 5.4.99.20,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000008314 217.0
BYD3_k127_1248633_25 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000006757 202.0
BYD3_k127_1248633_26 - - - - 0.0000000000000000000000000000000000000000000000000001005 209.0
BYD3_k127_1248633_27 - - - - 0.00000000000000000000000000000000000000000000001026 180.0
BYD3_k127_1248633_28 - - - - 0.0000000000000000000000000000000000000000000009066 183.0
BYD3_k127_1248633_29 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000005572 170.0
BYD3_k127_1248633_3 histidine ammonia-lyase K01745 GO:0003674,GO:0003824,GO:0004397,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016840,GO:0016841,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 610.0
BYD3_k127_1248633_30 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000364 139.0
BYD3_k127_1248633_31 Belongs to the ompA family - - - 0.00000000000000000000003358 117.0
BYD3_k127_1248633_32 Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - 0.00000000000000000001069 99.0
BYD3_k127_1248633_33 - - - - 0.000000000000000001453 87.0
BYD3_k127_1248633_34 - - - - 0.00000000000000005814 95.0
BYD3_k127_1248633_35 - - - - 0.0000000000000001933 79.0
BYD3_k127_1248633_36 - - - - 0.0000000000001005 84.0
BYD3_k127_1248633_37 Bacterial protein of unknown function (DUF883) - - - 0.0000000000009008 77.0
BYD3_k127_1248633_38 - - - - 0.0000000004144 73.0
BYD3_k127_1248633_39 Protein of unknown function (DUF1328) - - - 0.000000002894 70.0
BYD3_k127_1248633_4 Major Facilitator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007532 575.0
BYD3_k127_1248633_40 PFAM VanZ family protein - - - 0.000001034 61.0
BYD3_k127_1248633_41 PFAM ETC complex I subunit conserved region - - - 0.00001622 51.0
BYD3_k127_1248633_5 Transport of potassium into the cell K03549 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 527.0
BYD3_k127_1248633_6 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 495.0
BYD3_k127_1248633_7 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 488.0
BYD3_k127_1248633_8 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 482.0
BYD3_k127_1248633_9 PFAM Adenosine AMP deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006229 450.0
BYD3_k127_1266446_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 1.089e-212 676.0
BYD3_k127_1266446_1 signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009981 561.0
BYD3_k127_1266446_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 512.0
BYD3_k127_1266446_3 response regulator receiver K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 427.0
BYD3_k127_1266446_4 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 377.0
BYD3_k127_1266446_5 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 308.0
BYD3_k127_1266446_6 Lysin motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 308.0
BYD3_k127_1266446_7 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000006744 239.0
BYD3_k127_1266446_8 Sporulation related domain - - - 0.00000000000000000000000000005451 132.0
BYD3_k127_1266446_9 Domain of unknown function (DUF4390) - - - 0.000000001597 67.0
BYD3_k127_1740172_0 Efflux pump membrane transporter K19585 - - 0.0 1476.0
BYD3_k127_1740172_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1080.0
BYD3_k127_1740172_10 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 640.0
BYD3_k127_1740172_11 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 626.0
BYD3_k127_1740172_12 Trehalase K01194 - 3.2.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005932 613.0
BYD3_k127_1740172_13 MBOAT, membrane-bound O-acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 596.0
BYD3_k127_1740172_14 Peptidase dimerisation domain K12941 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 593.0
BYD3_k127_1740172_15 Insecticidal toxin complex protein TcaC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 643.0
BYD3_k127_1740172_16 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008111 517.0
BYD3_k127_1740172_17 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 516.0
BYD3_k127_1740172_18 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 459.0
BYD3_k127_1740172_19 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 - 1.18.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 426.0
BYD3_k127_1740172_2 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 7.081e-240 764.0
BYD3_k127_1740172_20 Protein of unknown function (DUF808) K09781 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991 421.0
BYD3_k127_1740172_21 N-terminal domain of oxidoreductase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 391.0
BYD3_k127_1740172_22 Sodium:sulfate symporter transmembrane region K14445 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006109 397.0
BYD3_k127_1740172_23 surface antigen variable number repeat protein K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006207 406.0
BYD3_k127_1740172_24 Platelet-activating factor acetylhydrolase, isoform II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007294 374.0
BYD3_k127_1740172_25 Lecithin:cholesterol acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 372.0
BYD3_k127_1740172_26 Berberine and berberine like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 366.0
BYD3_k127_1740172_27 Zn-dependent hydrolases including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007129 372.0
BYD3_k127_1740172_28 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 338.0
BYD3_k127_1740172_29 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 344.0
BYD3_k127_1740172_3 AAA-like domain - - - 1.913e-239 797.0
BYD3_k127_1740172_30 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008425,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0030580,GO:0032259,GO:0042180,GO:0042181,GO:0043333,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006768 328.0
BYD3_k127_1740172_31 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018065,GO:0018130,GO:0018160,GO:0018193,GO:0018198,GO:0019438,GO:0019538,GO:0033013,GO:0033014,GO:0034641,GO:0036211,GO:0042168,GO:0042440,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005877 323.0
BYD3_k127_1740172_32 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 319.0
BYD3_k127_1740172_33 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 332.0
BYD3_k127_1740172_34 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18298,K19586 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 305.0
BYD3_k127_1740172_35 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 305.0
BYD3_k127_1740172_36 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 300.0
BYD3_k127_1740172_37 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009162 293.0
BYD3_k127_1740172_38 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001827 284.0
BYD3_k127_1740172_39 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000001128 267.0
BYD3_k127_1740172_4 - - - - 3.122e-204 661.0
BYD3_k127_1740172_40 Protein of unknown function (DUF3300) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001629 278.0
BYD3_k127_1740172_41 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000144 266.0
BYD3_k127_1740172_42 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001345 267.0
BYD3_k127_1740172_43 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000006589 267.0
BYD3_k127_1740172_44 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002197 259.0
BYD3_k127_1740172_45 PFAM Appr-1-p processing domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006516 240.0
BYD3_k127_1740172_46 Protein of unknown function (DUF2950) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006751 252.0
BYD3_k127_1740172_47 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000001451 258.0
BYD3_k127_1740172_48 Ceramidase - - - 0.000000000000000000000000000000000000000000000000000000000000000002644 236.0
BYD3_k127_1740172_49 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000008288 245.0
BYD3_k127_1740172_5 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 3.282e-203 647.0
BYD3_k127_1740172_50 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002545 233.0
BYD3_k127_1740172_51 Response regulator of the LytR AlgR family K08083 - - 0.0000000000000000000000000000000000000000000000000000000000005704 232.0
BYD3_k127_1740172_52 - - - - 0.000000000000000000000000000000000000000000000000000000000003542 223.0
BYD3_k127_1740172_53 Belongs to the helicase family. UvrD subfamily K10742 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000007774 215.0
BYD3_k127_1740172_54 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000324 225.0
BYD3_k127_1740172_55 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000001065 206.0
BYD3_k127_1740172_56 Thioesterase - - - 0.000000000000000000000000000000000000000000000000000000454 209.0
BYD3_k127_1740172_57 Methyl-transferase - - - 0.000000000000000000000000000000000000000000000000003035 191.0
BYD3_k127_1740172_58 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000005776 198.0
BYD3_k127_1740172_59 Thioesterase-like superfamily - - - 0.0000000000000000000000000000000000000000000000005345 185.0
BYD3_k127_1740172_6 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 4.294e-200 647.0
BYD3_k127_1740172_60 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000007419 181.0
BYD3_k127_1740172_61 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000004291 169.0
BYD3_k127_1740172_62 - - - - 0.000000000000000000000000000000000000000000001822 181.0
BYD3_k127_1740172_63 Flagellar Assembly Protein A K09749 - - 0.000000000000000000000000000000000000000000006116 179.0
BYD3_k127_1740172_64 WHG domain - - - 0.0000000000000000000000000000000000000000004296 165.0
BYD3_k127_1740172_65 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000008747 154.0
BYD3_k127_1740172_66 Uroporphyrinogen III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000002322 160.0
BYD3_k127_1740172_67 heme oxygenase (decyclizing) activity - - - 0.000000000000000000000000000000000000003706 156.0
BYD3_k127_1740172_68 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000001562 153.0
BYD3_k127_1740172_69 Ferredoxin - - - 0.0000000000000000000000000000000008412 139.0
BYD3_k127_1740172_7 poly-beta-hydroxybutyrate polymerase K03821 - - 7.064e-195 627.0
BYD3_k127_1740172_70 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000000008614 137.0
BYD3_k127_1740172_71 Universal stress protein family - - - 0.00000000000000000000000000000001819 143.0
BYD3_k127_1740172_72 serine threonine protein kinase - - - 0.00000000000000000000000000000119 140.0
BYD3_k127_1740172_73 COG3209 Rhs family protein - - - 0.0000000000000000000000000003911 135.0
BYD3_k127_1740172_74 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000000001347 129.0
BYD3_k127_1740172_75 cytochrome - - - 0.000000000000000000000000001472 121.0
BYD3_k127_1740172_76 Peptidase_C39 like family - - - 0.0000000000000000000000001716 112.0
BYD3_k127_1740172_77 - - - - 0.00000000000000000000495 103.0
BYD3_k127_1740172_78 Sterol-binding protein K03690 - - 0.00000000000000000001244 100.0
BYD3_k127_1740172_79 protein conserved in bacteria K09806 - - 0.00000000000000000002187 100.0
BYD3_k127_1740172_8 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 1.331e-194 624.0
BYD3_k127_1740172_81 self proteolysis - - - 0.0000000000002381 86.0
BYD3_k127_1740172_82 - - - - 0.0000000000007173 75.0
BYD3_k127_1740172_85 - - - - 0.00000002623 64.0
BYD3_k127_1740172_86 E-Z type HEAT repeats - - - 0.000004458 57.0
BYD3_k127_1740172_87 Domain of unknown function (DUF4124) - - - 0.000007243 55.0
BYD3_k127_1740172_88 Protein of unknown function (DUF2845) - - - 0.00000958 53.0
BYD3_k127_1740172_89 general secretion pathway protein - - - 0.00004446 49.0
BYD3_k127_1740172_9 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 625.0
BYD3_k127_1740172_90 Tetratricopeptide repeat - - - 0.000885 46.0
BYD3_k127_1973433_0 OmpA family - - - 0.0 1994.0
BYD3_k127_1973433_1 Domain of unknown function DUF11 - - - 0.0 1409.0
BYD3_k127_1973433_10 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 2.211e-228 715.0
BYD3_k127_1973433_100 PFAM TfoX domain protein K07343 - - 0.0000000000000000000000000000001436 128.0
BYD3_k127_1973433_101 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000003791 123.0
BYD3_k127_1973433_102 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.0000000000000000000000000009157 118.0
BYD3_k127_1973433_103 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000004557 118.0
BYD3_k127_1973433_104 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.000000000000000000000000009149 128.0
BYD3_k127_1973433_105 PFAM Class I peptide chain release factor K15034 - - 0.00000000000000000000000001492 114.0
BYD3_k127_1973433_106 Cysteine methyltransferase K07443 - - 0.00000000000000000000000004391 111.0
BYD3_k127_1973433_107 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000002607 108.0
BYD3_k127_1973433_108 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K06149 - - 0.000000000000000000000001368 115.0
BYD3_k127_1973433_109 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 GO:0000018,GO:0000229,GO:0000785,GO:0000786,GO:0000787,GO:0000789,GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016032,GO:0016070,GO:0018130,GO:0019042,GO:0019045,GO:0019046,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031421,GO:0032359,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044374,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044815,GO:0045892,GO:0045893,GO:0045911,GO:0045934,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000002282 100.0
BYD3_k127_1973433_11 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 2.548e-228 734.0
BYD3_k127_1973433_110 Zinc-finger domain - - - 0.000000000000000000009509 93.0
BYD3_k127_1973433_111 Mj0042 family finger-like - - - 0.00000000000000001356 96.0
BYD3_k127_1973433_112 small protein containing a coiled-coil domain - - - 0.0000000000000002168 81.0
BYD3_k127_1973433_113 Tetracyclin repressor, C-terminal all-alpha domain - - - 0.000000000000002824 83.0
BYD3_k127_1973433_114 polyhydroxyalkanoic acid - - - 0.0000000000001293 76.0
BYD3_k127_1973433_117 - - - - 0.000000001208 68.0
BYD3_k127_1973433_118 Domain of unknown function (DUF4440) - - - 0.000000006321 63.0
BYD3_k127_1973433_119 Protein of unknown function (DUF3301) - - - 0.0000003904 61.0
BYD3_k127_1973433_12 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 3.628e-217 680.0
BYD3_k127_1973433_120 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 GO:0000287,GO:0003674,GO:0003824,GO:0004749,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006015,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042301,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046391,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.6.1 0.000001307 54.0
BYD3_k127_1973433_121 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0003186 52.0
BYD3_k127_1973433_122 Gram-negative bacterial TonB protein C-terminal - - - 0.0004234 51.0
BYD3_k127_1973433_13 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 5.804e-216 681.0
BYD3_k127_1973433_14 Tetratricopeptide repeat - - - 8.31e-208 663.0
BYD3_k127_1973433_15 Glucose / Sorbosone dehydrogenase - - - 3.842e-206 651.0
BYD3_k127_1973433_16 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 5.664e-205 651.0
BYD3_k127_1973433_17 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 2.49e-203 667.0
BYD3_k127_1973433_18 Peptidase family M13 K07386 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 617.0
BYD3_k127_1973433_19 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 602.0
BYD3_k127_1973433_2 Hydantoinase/oxoprolinase N-terminal region - - - 0.0 1267.0
BYD3_k127_1973433_20 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 553.0
BYD3_k127_1973433_21 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008665 553.0
BYD3_k127_1973433_22 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 547.0
BYD3_k127_1973433_23 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 529.0
BYD3_k127_1973433_24 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 512.0
BYD3_k127_1973433_25 Belongs to the GARS family K01945,K13713 GO:0000166,GO:0003674,GO:0003824,GO:0004637,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 527.0
BYD3_k127_1973433_26 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 511.0
BYD3_k127_1973433_27 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003943 493.0
BYD3_k127_1973433_28 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 478.0
BYD3_k127_1973433_29 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008514 468.0
BYD3_k127_1973433_3 Tetratricopeptide repeat - - - 2.954e-310 1017.0
BYD3_k127_1973433_30 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 467.0
BYD3_k127_1973433_31 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016822,GO:0016823,GO:0019439,GO:0019441,GO:0019752,GO:0030429,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.7.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005559 463.0
BYD3_k127_1973433_32 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 456.0
BYD3_k127_1973433_33 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 433.0
BYD3_k127_1973433_34 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 GO:0000287,GO:0003674,GO:0003824,GO:0004799,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009157,GO:0009162,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046073,GO:0046385,GO:0046483,GO:0046872,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 430.0
BYD3_k127_1973433_35 SAM-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 425.0
BYD3_k127_1973433_36 Protein of unknown function (DUF1302) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 429.0
BYD3_k127_1973433_37 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009602 413.0
BYD3_k127_1973433_38 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 GO:0002943,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050896,GO:0055114,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 401.0
BYD3_k127_1973433_39 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004722 380.0
BYD3_k127_1973433_4 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.756e-269 837.0
BYD3_k127_1973433_40 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 374.0
BYD3_k127_1973433_41 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 378.0
BYD3_k127_1973433_42 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0050570,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 365.0
BYD3_k127_1973433_43 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 362.0
BYD3_k127_1973433_44 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 366.0
BYD3_k127_1973433_45 Cupin superfamily protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 359.0
BYD3_k127_1973433_46 SMART Peptidoglycan-binding Lysin subgroup K16291 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 346.0
BYD3_k127_1973433_47 PFAM Phosphotransferase enzyme family K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 337.0
BYD3_k127_1973433_48 protein involved in response to NO K07234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007412 342.0
BYD3_k127_1973433_49 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 323.0
BYD3_k127_1973433_5 Protein of unknown function, DUF255 K06888 - - 4.925e-250 789.0
BYD3_k127_1973433_50 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 319.0
BYD3_k127_1973433_51 Inositol monophosphatase family K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 302.0
BYD3_k127_1973433_52 Phage tail sheath C-terminal domain K06907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 315.0
BYD3_k127_1973433_53 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 310.0
BYD3_k127_1973433_54 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 300.0
BYD3_k127_1973433_55 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 303.0
BYD3_k127_1973433_56 Homocysteine S-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 292.0
BYD3_k127_1973433_57 COG2951 Membrane-bound lytic murein transglycosylase B K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002037 300.0
BYD3_k127_1973433_58 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003576 279.0
BYD3_k127_1973433_59 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001116 284.0
BYD3_k127_1973433_6 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 4.98e-249 801.0
BYD3_k127_1973433_60 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001072 272.0
BYD3_k127_1973433_61 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002359 271.0
BYD3_k127_1973433_62 protein related to plant photosystem II stability assembly factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000469 269.0
BYD3_k127_1973433_63 MotA/TolQ/ExbB proton channel family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007161 258.0
BYD3_k127_1973433_64 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000003829 265.0
BYD3_k127_1973433_65 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000003831 254.0
BYD3_k127_1973433_66 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001464 255.0
BYD3_k127_1973433_67 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00966,K00992 GO:0000166,GO:0000270,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006040,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019752,GO:0030203,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044281,GO:0046872,GO:0070569,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.7.13,2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000002383 251.0
BYD3_k127_1973433_68 pfam php K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000004814 249.0
BYD3_k127_1973433_69 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008955,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0030203,GO:0034645,GO:0042546,GO:0043164,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000009216 242.0
BYD3_k127_1973433_7 exporters of the RND superfamily K07003 - - 4.338e-246 784.0
BYD3_k127_1973433_70 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.000000000000000000000000000000000000000000000000000000000000000003826 233.0
BYD3_k127_1973433_71 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000001137 229.0
BYD3_k127_1973433_72 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000001513 245.0
BYD3_k127_1973433_73 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000216 227.0
BYD3_k127_1973433_74 Aspartyl Asparaginyl beta-hydroxylase K12979 - - 0.00000000000000000000000000000000000000000000000000000000000005643 229.0
BYD3_k127_1973433_75 endonuclease III K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000001349 237.0
BYD3_k127_1973433_76 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000001902 218.0
BYD3_k127_1973433_77 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000139 203.0
BYD3_k127_1973433_78 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000003724 214.0
BYD3_k127_1973433_79 Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position K11211 - 2.7.1.166 0.000000000000000000000000000000000000000000000000000005564 197.0
BYD3_k127_1973433_8 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K07303 - 1.3.99.16 3.337e-236 760.0
BYD3_k127_1973433_80 protein affecting Mg2 Co2 transport K06195 - - 0.00000000000000000000000000000000000000000000000000003078 190.0
BYD3_k127_1973433_81 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000004544 205.0
BYD3_k127_1973433_82 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000002036 203.0
BYD3_k127_1973433_83 - - - - 0.0000000000000000000000000000000000000000000000000165 190.0
BYD3_k127_1973433_84 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000003784 189.0
BYD3_k127_1973433_85 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 GO:0003674,GO:0003824,GO:0003989,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009305,GO:0009987,GO:0016049,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 - 0.00000000000000000000000000000000000000000000004846 178.0
BYD3_k127_1973433_86 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000005121 173.0
BYD3_k127_1973433_87 arylformamidase activity - - - 0.0000000000000000000000000000000000000000000008992 176.0
BYD3_k127_1973433_88 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000000004278 169.0
BYD3_k127_1973433_89 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000001158 177.0
BYD3_k127_1973433_9 cytochrome C peroxidase - - - 1.446e-234 732.0
BYD3_k127_1973433_90 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000002106 167.0
BYD3_k127_1973433_91 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000326 165.0
BYD3_k127_1973433_92 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000000000007939 160.0
BYD3_k127_1973433_93 alpha beta - - - 0.00000000000000000000000000000000000000000008425 165.0
BYD3_k127_1973433_94 bis(5'-adenosyl)-triphosphatase activity - - - 0.000000000000000000000000000000000000000004991 167.0
BYD3_k127_1973433_95 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000000000000000000001682 155.0
BYD3_k127_1973433_96 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000002077 160.0
BYD3_k127_1973433_97 redox protein regulator of disulfide bond formation - - - 0.000000000000000000000000000000000000003289 163.0
BYD3_k127_1973433_98 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000004767 151.0
BYD3_k127_1973433_99 DNA mediated transformation K04096 - - 0.0000000000000000000000000000000009963 148.0
BYD3_k127_2009407_0 FtsX-like permease family K02004 - - 2.223e-321 1006.0
BYD3_k127_2009407_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.055e-261 823.0
BYD3_k127_2009407_10 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.0000000000000000000000000000000000000000000000000002539 203.0
BYD3_k127_2009407_11 Competence protein - - - 0.00000000000000000000000000000000000000000000004562 181.0
BYD3_k127_2009407_12 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008813,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.1.3.40 0.0000000000000000003192 95.0
BYD3_k127_2009407_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000649 572.0
BYD3_k127_2009407_3 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 456.0
BYD3_k127_2009407_4 HlyD family secretion protein K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 433.0
BYD3_k127_2009407_5 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007412 379.0
BYD3_k127_2009407_6 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007196 375.0
BYD3_k127_2009407_7 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 335.0
BYD3_k127_2009407_8 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006557 313.0
BYD3_k127_2009407_9 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000002362 275.0
BYD3_k127_208407_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1297.0
BYD3_k127_208407_1 PFAM Carbon starvation protein CstA K06200 - - 2.153e-320 997.0
BYD3_k127_208407_10 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005128 589.0
BYD3_k127_208407_11 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 515.0
BYD3_k127_208407_12 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 514.0
BYD3_k127_208407_13 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007877 506.0
BYD3_k127_208407_14 Asparaginase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 484.0
BYD3_k127_208407_15 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 477.0
BYD3_k127_208407_16 PFAM asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005664 479.0
BYD3_k127_208407_17 saccharopine dehydrogenase activity K00290 - 1.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008335 457.0
BYD3_k127_208407_18 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 466.0
BYD3_k127_208407_19 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 451.0
BYD3_k127_208407_2 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 3.759e-290 907.0
BYD3_k127_208407_20 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007081 424.0
BYD3_k127_208407_21 Membrane-bound serine protease (ClpP class) K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 420.0
BYD3_k127_208407_22 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005204 402.0
BYD3_k127_208407_23 PFAM ABC transporter related K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 376.0
BYD3_k127_208407_24 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 365.0
BYD3_k127_208407_25 - K07221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 366.0
BYD3_k127_208407_26 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 363.0
BYD3_k127_208407_27 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 349.0
BYD3_k127_208407_28 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006598 337.0
BYD3_k127_208407_29 ABC-2 family transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007801 352.0
BYD3_k127_208407_3 Fumarase C C-terminus - - - 3.516e-244 763.0
BYD3_k127_208407_30 Preprotein translocase subunit TatD K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 314.0
BYD3_k127_208407_31 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07660 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 297.0
BYD3_k127_208407_32 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009093 303.0
BYD3_k127_208407_33 MazG nucleotide pyrophosphohydrolase domain K04765 - 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002305 284.0
BYD3_k127_208407_34 uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000263 280.0
BYD3_k127_208407_35 Histidine kinase K07637 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005669 291.0
BYD3_k127_208407_36 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007752 297.0
BYD3_k127_208407_37 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006671 247.0
BYD3_k127_208407_38 PFAM sulfotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004389 248.0
BYD3_k127_208407_39 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002853 246.0
BYD3_k127_208407_4 Belongs to the malate synthase family K01638 - 2.3.3.9 1.62e-216 686.0
BYD3_k127_208407_40 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000004291 211.0
BYD3_k127_208407_41 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000003153 211.0
BYD3_k127_208407_42 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.000000000000000000000000000000000000000000000000000000114 209.0
BYD3_k127_208407_43 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000008524 196.0
BYD3_k127_208407_44 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000004431 200.0
BYD3_k127_208407_45 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0031224,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000007052 204.0
BYD3_k127_208407_46 - - - - 0.00000000000000000000000000000000000000000000000008704 188.0
BYD3_k127_208407_47 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000002193 180.0
BYD3_k127_208407_48 Nudix hydrolase - - - 0.00000000000000000000000000000000000000000005653 182.0
BYD3_k127_208407_49 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000215 174.0
BYD3_k127_208407_5 Catalyzes the reversible formation of glyoxylate and succinate from isocitrate K01637 - 4.1.3.1 1.009e-210 661.0
BYD3_k127_208407_50 Protein of unknown function DUF45 K07043 - - 0.000000000000000000000000000000000000000000338 181.0
BYD3_k127_208407_51 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000006874 153.0
BYD3_k127_208407_52 - - - - 0.00000000000000000000000000000000001692 147.0
BYD3_k127_208407_53 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000000000000000000000000000001682 136.0
BYD3_k127_208407_54 Nodulation protein S (NodS) K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000001527 136.0
BYD3_k127_208407_55 Polysaccharide biosynthesis protein K03328,K16695 - - 0.000000000000000000000000003839 128.0
BYD3_k127_208407_56 Outer membrane lipoprotein - - - 0.00000000000000000000000001343 119.0
BYD3_k127_208407_57 protein acetylation - - - 0.0000000000000000000000004835 113.0
BYD3_k127_208407_58 Glycosyl transferase family 2 K07011 - - 0.0000000000000000000003693 110.0
BYD3_k127_208407_59 - - - - 0.000000000000000000002411 100.0
BYD3_k127_208407_6 Aldehyde dehydrogenase family K00128 - 1.2.1.3 6.293e-208 666.0
BYD3_k127_208407_60 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000007709 106.0
BYD3_k127_208407_61 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000001904 103.0
BYD3_k127_208407_62 DNA topological change - - - 0.00000000000000009118 91.0
BYD3_k127_208407_63 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000152 94.0
BYD3_k127_208407_64 PFAM Glycosyl transferase family 2 - - - 0.000000000000002189 89.0
BYD3_k127_208407_65 Formyl transferase - - - 0.00000000000671 78.0
BYD3_k127_208407_66 Selenoprotein, putative - - - 0.0000000001991 72.0
BYD3_k127_208407_68 Glycosyl transferase group 2 family protein K12987,K12988 - - 0.000000008393 67.0
BYD3_k127_208407_7 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 2.642e-202 657.0
BYD3_k127_208407_8 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 5.003e-194 622.0
BYD3_k127_208407_9 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009498 608.0
BYD3_k127_2304732_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009031 568.0
BYD3_k127_2304732_1 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 501.0
BYD3_k127_2304732_10 ATP synthase I chain K02116 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0044769,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000003184 72.0
BYD3_k127_2304732_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 338.0
BYD3_k127_2304732_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 322.0
BYD3_k127_2304732_4 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001355 271.0
BYD3_k127_2304732_5 Acetyltransferase (GNAT) domain K00663 - 2.3.1.82 0.000000000000000000000000000000000000000000000000000000000007724 215.0
BYD3_k127_2304732_6 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000249 157.0
BYD3_k127_2304732_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000004203 163.0
BYD3_k127_2304732_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000006347 133.0
BYD3_k127_2304732_9 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000007636 130.0
BYD3_k127_2308560_0 COG0146 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 9.672e-319 984.0
BYD3_k127_2308560_1 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 2.325e-277 871.0
BYD3_k127_2308560_10 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004541 253.0
BYD3_k127_2308560_11 Isochorismatase family K13995 - 3.5.1.107 0.000000000000000000000000000000000000000000000000000000000000000000000004151 248.0
BYD3_k127_2308560_12 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000001845 196.0
BYD3_k127_2308560_13 FCD - - - 0.000000000000000000000000000000000000000000000000001139 190.0
BYD3_k127_2308560_14 salt-induced outer membrane protein K07283 - - 0.0000000000000000000000000000000000000000002811 167.0
BYD3_k127_2308560_15 BrnA antitoxin of type II toxin-antitoxin system - - - 0.00000000001509 72.0
BYD3_k127_2308560_16 Helix-turn-helix XRE-family like proteins - - - 0.0000001718 64.0
BYD3_k127_2308560_2 Outer membrane receptor K02014 - - 9.349e-241 770.0
BYD3_k127_2308560_3 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 546.0
BYD3_k127_2308560_4 MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006804 537.0
BYD3_k127_2308560_5 PFAM sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003767 487.0
BYD3_k127_2308560_6 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008587 469.0
BYD3_k127_2308560_7 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 401.0
BYD3_k127_2308560_8 PFAM Pyruvate carboxyltransferase K01640,K18314 - 4.1.3.4,4.1.3.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 374.0
BYD3_k127_2308560_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002056 267.0
BYD3_k127_2334890_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 2.088e-244 775.0
BYD3_k127_2334890_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005399 610.0
BYD3_k127_2334890_10 mRNA catabolic process - - - 0.000000000000000000000000000000000000000000000000000000007215 204.0
BYD3_k127_2334890_11 - - - - 0.00000000000000000000000000000000000000000000000000000007101 201.0
BYD3_k127_2334890_12 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.000000000000000000000000000000000000000000000004517 188.0
BYD3_k127_2334890_13 Sigma factor PP2C-like phosphatases K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000312 179.0
BYD3_k127_2334890_14 LysR substrate binding domain K03566 - - 0.00000000000000000000000000000000000000001712 164.0
BYD3_k127_2334890_15 Belongs to the UPF0312 family K12262 - - 0.000000000000000000000000000000002314 136.0
BYD3_k127_2334890_16 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000007085 143.0
BYD3_k127_2334890_17 Tetratricopeptide repeat - - - 0.00000000000000000000000000000001162 147.0
BYD3_k127_2334890_18 Binds the 23S rRNA K02909 GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000001754 116.0
BYD3_k127_2334890_19 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000004522 98.0
BYD3_k127_2334890_2 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 426.0
BYD3_k127_2334890_20 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 0.00000000000004535 75.0
BYD3_k127_2334890_21 - - - - 0.00000000000005881 76.0
BYD3_k127_2334890_3 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 364.0
BYD3_k127_2334890_4 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 352.0
BYD3_k127_2334890_5 membrane protein (homolog of Drosophila rhomboid) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 288.0
BYD3_k127_2334890_6 Adenylate cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003693 304.0
BYD3_k127_2334890_7 PFAM YicC-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007677 258.0
BYD3_k127_2334890_8 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000003053 235.0
BYD3_k127_2334890_9 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000003917 224.0
BYD3_k127_2459618_0 Cytochrome c - - - 5.272e-194 614.0
BYD3_k127_2459618_1 COG NOG10142 non supervised orthologous group - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 513.0
BYD3_k127_2459618_11 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000225 160.0
BYD3_k127_2459618_12 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000009296 151.0
BYD3_k127_2459618_13 Pfam Response regulator receiver - - - 0.000000000000000000000000000000000002553 141.0
BYD3_k127_2459618_14 Protein of unknown function (DUF2905) - - - 0.00000000000000000766 84.0
BYD3_k127_2459618_15 Transposase IS200 like - - - 0.000003538 56.0
BYD3_k127_2459618_2 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 465.0
BYD3_k127_2459618_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005934 452.0
BYD3_k127_2459618_4 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008338 424.0
BYD3_k127_2459618_5 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 386.0
BYD3_k127_2459618_6 Glutaminase K01425 - 3.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 316.0
BYD3_k127_2459618_7 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 308.0
BYD3_k127_2459618_8 Bile acid K03453 - - 0.0000000000000000000000000000000000000000000000000000000002073 213.0
BYD3_k127_2459618_9 PFAM regulatory protein LuxR K13041 - - 0.00000000000000000000000000000000000000000000000000000721 203.0
BYD3_k127_2600502_0 Belongs to the GcvT family K00315,K19191 - 1.5.3.19,1.5.8.4 0.0 1371.0
BYD3_k127_2600502_1 Glycine cleavage T-protein C-terminal barrel domain K00302 - 1.5.3.1 0.0 1251.0
BYD3_k127_2600502_10 Receptor - - - 1.101e-227 732.0
BYD3_k127_2600502_11 Angiotensin-converting enzyme K01283 - 3.4.15.1 1.729e-218 716.0
BYD3_k127_2600502_12 FAD dependent oxidoreductase K00303 - 1.5.3.1 3.818e-215 703.0
BYD3_k127_2600502_13 COG0457 FOG TPR repeat - - - 1.323e-214 702.0
BYD3_k127_2600502_14 Major Facilitator Superfamily K02445,K07783 - - 7.007e-206 661.0
BYD3_k127_2600502_15 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 6.241e-198 648.0
BYD3_k127_2600502_16 COG3104 Dipeptide tripeptide permease K03305 - - 3.233e-194 617.0
BYD3_k127_2600502_17 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 617.0
BYD3_k127_2600502_18 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 613.0
BYD3_k127_2600502_19 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000479 600.0
BYD3_k127_2600502_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.0 1070.0
BYD3_k127_2600502_20 belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000695 601.0
BYD3_k127_2600502_21 Nucleoside K03289,K11537 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006965 565.0
BYD3_k127_2600502_22 ABC-type proline glycine betaine transport systems periplasmic components K02002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007338 573.0
BYD3_k127_2600502_23 response regulator K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 538.0
BYD3_k127_2600502_24 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 508.0
BYD3_k127_2600502_25 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 527.0
BYD3_k127_2600502_26 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 485.0
BYD3_k127_2600502_27 Sulfate ABC transporter, periplasmic sulfate-binding protein K02048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 477.0
BYD3_k127_2600502_28 Vitamin B12 dependent methionine synthase activation K00548,K15023 - 2.1.1.13,2.1.1.258 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 475.0
BYD3_k127_2600502_29 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 467.0
BYD3_k127_2600502_3 Domain of unknown function (DUF4445) - - - 2.388e-307 955.0
BYD3_k127_2600502_30 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007149 487.0
BYD3_k127_2600502_31 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 472.0
BYD3_k127_2600502_32 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 451.0
BYD3_k127_2600502_33 COG3540 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 452.0
BYD3_k127_2600502_34 Mediates influx of magnesium ions K03284,K16074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 426.0
BYD3_k127_2600502_35 PFAM helix-turn-helix- domain containing protein, AraC type K21826 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 412.0
BYD3_k127_2600502_36 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 407.0
BYD3_k127_2600502_37 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 402.0
BYD3_k127_2600502_38 ATPase activity K02045 - 3.6.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 395.0
BYD3_k127_2600502_39 ABC-type proline glycine betaine transport system, ATPase component K02000 GO:0000166,GO:0003674,GO:0004888,GO:0005034,GO:0005215,GO:0005275,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006950,GO:0006970,GO:0006972,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0009628,GO:0009987,GO:0015695,GO:0015696,GO:0015697,GO:0015837,GO:0015838,GO:0016020,GO:0016021,GO:0017076,GO:0022857,GO:0023052,GO:0030554,GO:0031224,GO:0031460,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0038023,GO:0043167,GO:0043168,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0060089,GO:0065007,GO:0071702,GO:0071705,GO:0071944,GO:0072337,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 414.0
BYD3_k127_2600502_4 TonB dependent receptor K02014 - - 5.458e-293 918.0
BYD3_k127_2600502_40 cobalamin binding K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 375.0
BYD3_k127_2600502_41 amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004834 374.0
BYD3_k127_2600502_42 ABC transporter K02047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006356 370.0
BYD3_k127_2600502_43 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009606 363.0
BYD3_k127_2600502_44 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003845 349.0
BYD3_k127_2600502_45 PFAM Phosphate-selective porin O K07221 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 351.0
BYD3_k127_2600502_46 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 346.0
BYD3_k127_2600502_47 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 344.0
BYD3_k127_2600502_48 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 339.0
BYD3_k127_2600502_49 signal transduction histidine kinase K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003728 323.0
BYD3_k127_2600502_5 GMC oxidoreductase K00108 - 1.1.99.1 4.401e-280 869.0
BYD3_k127_2600502_50 Putative diguanylate phosphodiesterase K03320,K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 337.0
BYD3_k127_2600502_51 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 310.0
BYD3_k127_2600502_52 Binding-protein-dependent transport system inner membrane component K02046 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 317.0
BYD3_k127_2600502_53 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 301.0
BYD3_k127_2600502_54 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004591 296.0
BYD3_k127_2600502_55 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 290.0
BYD3_k127_2600502_56 PFAM MscS Mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004571 288.0
BYD3_k127_2600502_57 regulation of DNA-templated transcription, elongation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009944 302.0
BYD3_k127_2600502_58 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004438 256.0
BYD3_k127_2600502_59 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005394 259.0
BYD3_k127_2600502_6 trimethylamine methyltransferase K14083 - 2.1.1.250 1.73e-274 854.0
BYD3_k127_2600502_60 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001435 262.0
BYD3_k127_2600502_61 Protein of unknown function (DUF1638) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002284 252.0
BYD3_k127_2600502_62 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001338 263.0
BYD3_k127_2600502_63 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0018130,GO:0019438,GO:0031668,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071897,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000002744 254.0
BYD3_k127_2600502_64 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000003112 265.0
BYD3_k127_2600502_65 COG4942 Membrane-bound metallopeptidase - GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000001148 247.0
BYD3_k127_2600502_66 Belongs to the bacterial glucokinase family - - - 0.00000000000000000000000000000000000000000000000000000000000000005978 235.0
BYD3_k127_2600502_67 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000001293 228.0
BYD3_k127_2600502_68 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000000000000000003081 207.0
BYD3_k127_2600502_69 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000000000000001952 204.0
BYD3_k127_2600502_7 Glycosyl hydrolases family 15 - - - 1.111e-249 788.0
BYD3_k127_2600502_70 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000203 203.0
BYD3_k127_2600502_71 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000006603 202.0
BYD3_k127_2600502_72 Protein of unknown function (DUF3313) - - - 0.0000000000000000000000000000000000000000000000002989 193.0
BYD3_k127_2600502_73 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000005222 174.0
BYD3_k127_2600502_74 transporter - - - 0.000000000000000000000000000000000000000002478 173.0
BYD3_k127_2600502_75 Sarcosine oxidase, gamma subunit family K00305 - 1.5.3.1 0.0000000000000000000000000000000000000001476 158.0
BYD3_k127_2600502_76 - - - - 0.0000000000000000000000000000000000000004434 155.0
BYD3_k127_2600502_77 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 GO:0002790,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0034613,GO:0042886,GO:0043952,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051082,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0072321 - 0.000000000000000000000000000000000006956 144.0
BYD3_k127_2600502_78 Sarcosine oxidase delta subunit K00304 - 1.5.3.1 0.00000000000000000000000000000000001283 152.0
BYD3_k127_2600502_79 inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000001542 155.0
BYD3_k127_2600502_8 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 6.759e-245 763.0
BYD3_k127_2600502_80 diguanylate cyclase - - - 0.00000000000000000000000000000000003197 154.0
BYD3_k127_2600502_81 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000001625 131.0
BYD3_k127_2600502_82 Virulence factor - - - 0.0000000000000000000000000000001441 135.0
BYD3_k127_2600502_83 OmpA-like transmembrane domain - - - 0.00000000000000000000000003525 125.0
BYD3_k127_2600502_84 PFAM Membrane protein of K08972 - - 0.00000000000000000000000008977 111.0
BYD3_k127_2600502_85 Sulfurtransferase - - - 0.00000000000000000000000008977 111.0
BYD3_k127_2600502_86 long-chain fatty acid transport protein - - - 0.00000000000000000000000009078 118.0
BYD3_k127_2600502_87 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000002997 101.0
BYD3_k127_2600502_88 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0033218,GO:0042277,GO:0043167,GO:0043168,GO:0043295,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0055114,GO:0072341,GO:1900750,GO:1901681 - 0.00000000000000000003638 92.0
BYD3_k127_2600502_89 TIGRFAM HAD-superfamily hydrolase subfamily IA, variant 3 K19270 - 3.1.3.23 0.0000000000000000004348 100.0
BYD3_k127_2600502_9 transporter - - - 9.492e-239 756.0
BYD3_k127_2600502_90 Belongs to the bacterial ribosomal protein bL34 family K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000001795 71.0
BYD3_k127_2600502_91 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000001688 70.0
BYD3_k127_2600502_92 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000009902 69.0
BYD3_k127_2600502_93 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000001934 68.0
BYD3_k127_2600502_94 Domain of unknown function (DUF4124) - - - 0.000000001916 66.0
BYD3_k127_2600502_95 Polyketide cyclase / dehydrase and lipid transport - - - 0.0003329 49.0
BYD3_k127_2602678_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 6.613e-262 838.0
BYD3_k127_2602678_1 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008124 486.0
BYD3_k127_2602678_10 Chromosomal replication initiator, DnaA K07491 - - 0.00000000000000000000000000000000000000000000000000000727 200.0
BYD3_k127_2602678_11 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000000000001415 189.0
BYD3_k127_2602678_12 Peptidase_C39 like family - - - 0.00000000000000000000000000000000000000000000001361 181.0
BYD3_k127_2602678_13 phosphorelay signal transduction system K02477 - - 0.00000000000000000000000000000000000000000000001837 184.0
BYD3_k127_2602678_14 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000006226 168.0
BYD3_k127_2602678_15 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000001183 125.0
BYD3_k127_2602678_16 ARD/ARD' family - - - 0.0000000000000000000000000000138 134.0
BYD3_k127_2602678_17 - - - - 0.0000000000000000001515 94.0
BYD3_k127_2602678_18 - - - - 0.0000000003117 68.0
BYD3_k127_2602678_19 chaperone-mediated protein folding K00575,K11739 - 2.1.1.80 0.000000001166 67.0
BYD3_k127_2602678_2 PFAM peptidase M48 Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 455.0
BYD3_k127_2602678_3 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008055 438.0
BYD3_k127_2602678_4 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007822 327.0
BYD3_k127_2602678_5 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 286.0
BYD3_k127_2602678_6 Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003828 281.0
BYD3_k127_2602678_7 Bacterial transcriptional repressor C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003374 275.0
BYD3_k127_2602678_8 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000007426 241.0
BYD3_k127_2602678_9 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000125 216.0
BYD3_k127_2634811_0 Subtilase family - - - 5.818e-276 873.0
BYD3_k127_2634811_1 - - - - 0.0000000000000000000000000000000000000000000001642 178.0
BYD3_k127_2634811_2 Peptidase dimerisation domain - - - 0.00000000007717 63.0
BYD3_k127_2710836_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1158.0
BYD3_k127_2710836_1 peptidase K01278 - 3.4.14.5 1.306e-221 711.0
BYD3_k127_2710836_10 Thiamine monophosphate synthase K03574 - 3.6.1.55 0.0000000000000000000000000000000000000005016 160.0
BYD3_k127_2710836_11 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000004424 83.0
BYD3_k127_2710836_2 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 4.211e-221 708.0
BYD3_k127_2710836_3 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 6.32e-221 699.0
BYD3_k127_2710836_4 Type II secretion system K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 499.0
BYD3_k127_2710836_5 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 313.0
BYD3_k127_2710836_6 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.00000000000000000000000000000000000000000000000000000608 208.0
BYD3_k127_2710836_7 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000006512 189.0
BYD3_k127_2710836_8 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000001038 186.0
BYD3_k127_2710836_9 Pilin (bacterial filament) K02650,K02655 - - 0.0000000000000000000000000000000000000000001016 165.0
BYD3_k127_2757882_0 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 422.0
BYD3_k127_2757882_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004053 429.0
BYD3_k127_2757882_10 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000006452 234.0
BYD3_k127_2757882_11 HD domain K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000000000000000000000000000000000000000000253 216.0
BYD3_k127_2757882_12 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000006947 224.0
BYD3_k127_2757882_13 ferroxidase activity K03594 GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000002406 209.0
BYD3_k127_2757882_14 membrane protein domain - - - 0.0000000000000000000000000000000000000000000166 166.0
BYD3_k127_2757882_15 protein conserved in bacteria K04750 - - 0.00000000000000000000000000000000000000000006978 165.0
BYD3_k127_2757882_16 PFAM Cytochrome C - - - 0.000000000000000000000000000000005909 136.0
BYD3_k127_2757882_17 - - - - 0.00000000000000000000000000000001312 143.0
BYD3_k127_2757882_18 Putative DNA-binding domain - - - 0.0000000000000000000000000000001495 142.0
BYD3_k127_2757882_19 BON domain K04065 - - 0.0000000000000000000000002347 112.0
BYD3_k127_2757882_2 Protein of unknown function (DUF692) K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 366.0
BYD3_k127_2757882_20 Protein of unknown function (DUF1232) - - - 0.000000000000000000000004107 104.0
BYD3_k127_2757882_21 Belongs to the UPF0337 (CsbD) family - - - 0.000000000000000000000005245 109.0
BYD3_k127_2757882_23 OmpA-like transmembrane domain - - - 0.000000000000000002153 93.0
BYD3_k127_2757882_24 response regulator receiver - - - 0.000000000000000007379 89.0
BYD3_k127_2757882_25 UPF0391 membrane protein - - - 0.0000000000000008905 78.0
BYD3_k127_2757882_3 antibiotic catabolic process K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 336.0
BYD3_k127_2757882_4 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003503 291.0
BYD3_k127_2757882_5 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001105 262.0
BYD3_k127_2757882_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007068 273.0
BYD3_k127_2757882_7 Amidinotransferase K01482 - 3.5.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000765 258.0
BYD3_k127_2757882_8 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005523 247.0
BYD3_k127_2757882_9 Histidine kinase K05962 - 2.7.13.1 0.00000000000000000000000000000000000000000000000000000000000000000001319 250.0
BYD3_k127_281558_0 WD40-like Beta Propeller Repeat - - - 0.0 1024.0
BYD3_k127_281558_1 Prolyl oligopeptidase family - - - 4.41e-271 872.0
BYD3_k127_281558_2 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009663 532.0
BYD3_k127_281558_3 Peptidase family S58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 499.0
BYD3_k127_281558_4 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009076 456.0
BYD3_k127_281558_5 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000544 449.0
BYD3_k127_281558_6 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 434.0
BYD3_k127_281558_7 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 312.0
BYD3_k127_281558_8 Transcriptional regulator K03566 - - 0.000000000000000000000000000000000000000001194 167.0
BYD3_k127_281558_9 YMGG-like Gly-zipper - - - 0.00000000000000000000000003651 115.0
BYD3_k127_2868132_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1077.0
BYD3_k127_2868132_1 Belongs to the ClpA ClpB family K03694 - - 9.969e-305 946.0
BYD3_k127_2868132_2 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 1.446e-200 638.0
BYD3_k127_2868132_3 general secretion pathway protein D K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 534.0
BYD3_k127_2868132_4 General secretion pathway protein K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008592 417.0
BYD3_k127_2868132_5 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000006647 156.0
BYD3_k127_2868132_6 Type II secretion system protein C - - - 0.000000000000000000000000000000000000002136 160.0
BYD3_k127_2971288_0 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 468.0
BYD3_k127_2971288_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 426.0
BYD3_k127_2971288_2 Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 422.0
BYD3_k127_2971288_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 389.0
BYD3_k127_2971288_4 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 341.0
BYD3_k127_2971288_5 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001463 275.0
BYD3_k127_2971288_6 Putative porin - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000008744 195.0
BYD3_k127_2971288_7 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000001342 160.0
BYD3_k127_2976158_0 COG3459 Cellobiose phosphorylase - - - 0.0 3984.0
BYD3_k127_2976158_1 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1583.0
BYD3_k127_2976158_10 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 5.394e-221 725.0
BYD3_k127_2976158_11 NADH ubiquinone oxidoreductase subunit K00342 - 1.6.5.3 2.552e-219 691.0
BYD3_k127_2976158_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 2.14e-204 643.0
BYD3_k127_2976158_13 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 585.0
BYD3_k127_2976158_14 Belongs to the peptidase S41A family K03797 GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016787,GO:0019538,GO:0023052,GO:0030163,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0046677,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 580.0
BYD3_k127_2976158_15 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 542.0
BYD3_k127_2976158_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009086 525.0
BYD3_k127_2976158_17 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 490.0
BYD3_k127_2976158_18 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 485.0
BYD3_k127_2976158_19 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 465.0
BYD3_k127_2976158_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1131.0
BYD3_k127_2976158_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 443.0
BYD3_k127_2976158_21 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 429.0
BYD3_k127_2976158_22 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 425.0
BYD3_k127_2976158_23 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005194 411.0
BYD3_k127_2976158_24 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 387.0
BYD3_k127_2976158_25 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 371.0
BYD3_k127_2976158_26 Crp-like helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 362.0
BYD3_k127_2976158_27 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 349.0
BYD3_k127_2976158_28 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008212 324.0
BYD3_k127_2976158_29 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009544 314.0
BYD3_k127_2976158_3 Heat shock 70 kDa protein K04043 - - 3.413e-313 971.0
BYD3_k127_2976158_30 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 306.0
BYD3_k127_2976158_31 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 305.0
BYD3_k127_2976158_32 Domain of unknown function (DUF4398) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003096 277.0
BYD3_k127_2976158_33 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009519 275.0
BYD3_k127_2976158_34 Transcriptional regulator, Crp Fnr family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001747 269.0
BYD3_k127_2976158_35 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000005817 267.0
BYD3_k127_2976158_36 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002957 250.0
BYD3_k127_2976158_37 Thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000002342 263.0
BYD3_k127_2976158_38 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000001634 252.0
BYD3_k127_2976158_39 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000003376 240.0
BYD3_k127_2976158_4 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.525e-309 957.0
BYD3_k127_2976158_40 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000001265 241.0
BYD3_k127_2976158_41 TIGRFAM NADH-quinone oxidoreductase, E subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000001436 239.0
BYD3_k127_2976158_42 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000104 226.0
BYD3_k127_2976158_43 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000002481 202.0
BYD3_k127_2976158_44 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000007049 213.0
BYD3_k127_2976158_45 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000001945 199.0
BYD3_k127_2976158_46 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000007227 190.0
BYD3_k127_2976158_47 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000001043 186.0
BYD3_k127_2976158_48 - - - - 0.0000000000000000000000000000000000003866 156.0
BYD3_k127_2976158_49 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000000000004595 153.0
BYD3_k127_2976158_5 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K15022 - 1.17.1.10 8.018e-293 909.0
BYD3_k127_2976158_50 PAS sensor protein - - - 0.00000000000000000000000000000000001618 158.0
BYD3_k127_2976158_51 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000006273 140.0
BYD3_k127_2976158_52 Cyclase dehydrase - - - 0.000000000000000000000000000000002612 135.0
BYD3_k127_2976158_53 lipid kinase, YegS Rv2252 BmrU family - - - 0.0000000000000000000000000000391 135.0
BYD3_k127_2976158_54 Transglycosylase associated protein - - - 0.000000000000000000000000004941 116.0
BYD3_k127_2976158_55 Protein of unknown function (DUF1249) K09920 - - 0.00000000000000000000000004121 113.0
BYD3_k127_2976158_56 - - - - 0.000000000000000000000004082 104.0
BYD3_k127_2976158_57 RNA-binding protein K07574 - - 0.000000000000000000000007471 105.0
BYD3_k127_2976158_58 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.0000000000000000000002104 102.0
BYD3_k127_2976158_59 Transglycosylase associated protein - - - 0.0000000000000000000002722 103.0
BYD3_k127_2976158_6 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 1.101e-259 822.0
BYD3_k127_2976158_60 Domain of unknown function (DUF4398) - - - 0.00000000000000000000176 99.0
BYD3_k127_2976158_61 Preprotein translocase subunit SecG K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000000000003994 102.0
BYD3_k127_2976158_62 Belongs to the UPF0125 (RnfH) family K09801 - - 0.0000000000000000005491 91.0
BYD3_k127_2976158_63 Transglycosylase associated protein - - - 0.00000000001841 73.0
BYD3_k127_2976158_64 - - - - 0.00000001899 57.0
BYD3_k127_2976158_7 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 3.164e-257 814.0
BYD3_k127_2976158_8 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 2.158e-241 780.0
BYD3_k127_2976158_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 1.145e-239 745.0
BYD3_k127_2981030_0 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 3.951e-220 701.0
BYD3_k127_2981030_1 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 599.0
BYD3_k127_2981030_10 Multidrug efflux pump K03327 GO:0003674,GO:0005215,GO:0006810,GO:0006855,GO:0008150,GO:0015238,GO:0015893,GO:0022857,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0046677,GO:0050896,GO:0051179,GO:0051234,GO:0055085 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 319.0
BYD3_k127_2981030_11 secretion protein K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000227 237.0
BYD3_k127_2981030_13 PFAM RNP-1 like RNA-binding protein - - - 0.000000000004158 66.0
BYD3_k127_2981030_14 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000001585 76.0
BYD3_k127_2981030_15 - - - - 0.0000000003047 69.0
BYD3_k127_2981030_16 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000001008 61.0
BYD3_k127_2981030_17 - - - - 0.0005205 52.0
BYD3_k127_2981030_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 550.0
BYD3_k127_2981030_3 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007494 552.0
BYD3_k127_2981030_4 Belongs to the peptidase S1B family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 462.0
BYD3_k127_2981030_5 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase K16171 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 450.0
BYD3_k127_2981030_6 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 387.0
BYD3_k127_2981030_7 asparaginase K13051 - 3.4.19.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 364.0
BYD3_k127_2981030_8 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 359.0
BYD3_k127_2981030_9 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000628 340.0
BYD3_k127_2990574_0 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0 1069.0
BYD3_k127_2990574_1 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 0.0 1011.0
BYD3_k127_2990574_10 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 478.0
BYD3_k127_2990574_11 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 428.0
BYD3_k127_2990574_12 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006767 393.0
BYD3_k127_2990574_13 COG0076 Glutamate decarboxylase and related PLP-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 379.0
BYD3_k127_2990574_14 SMART Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 372.0
BYD3_k127_2990574_15 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 319.0
BYD3_k127_2990574_16 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 312.0
BYD3_k127_2990574_17 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000005383 268.0
BYD3_k127_2990574_18 PFAM MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000295 248.0
BYD3_k127_2990574_19 Belongs to the BI1 family K19416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001893 255.0
BYD3_k127_2990574_2 DNA segregation ATPase FtsK SpoIIIE K03466 - - 2.895e-264 834.0
BYD3_k127_2990574_20 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0000217,GO:0000400,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000001142 235.0
BYD3_k127_2990574_21 - - - - 0.000000000000000000000000000000000000000000000000000000001424 215.0
BYD3_k127_2990574_22 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000004836 182.0
BYD3_k127_2990574_23 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000000000000000000000000000000000000000004283 178.0
BYD3_k127_2990574_24 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000001197 156.0
BYD3_k127_2990574_25 Biopolymer transport protein K03560 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032153,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000006991 154.0
BYD3_k127_2990574_26 Acyl-CoA thioesterase K07107 - - 0.00000000000000000000000000000000000001868 148.0
BYD3_k127_2990574_27 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000009358 149.0
BYD3_k127_2990574_28 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000008887 140.0
BYD3_k127_2990574_29 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000001102 136.0
BYD3_k127_2990574_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.633e-201 649.0
BYD3_k127_2990574_30 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000124 130.0
BYD3_k127_2990574_31 Invasion gene expression up-regulator, SirB - - - 0.00000000000000000000000000000001452 131.0
BYD3_k127_2990574_32 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.000000000000000000000000002314 123.0
BYD3_k127_2990574_33 Phosphoglycerate mutase family - - - 0.0000000000000000006439 97.0
BYD3_k127_2990574_34 TonB C terminal K03646 - - 0.0000000000000000006787 100.0
BYD3_k127_2990574_35 - - - - 0.000000000000002003 84.0
BYD3_k127_2990574_36 peptidase activity, acting on L-amino acid peptides K01187,K01448,K07752 - 3.2.1.20,3.4.17.22,3.5.1.28 0.0000005856 61.0
BYD3_k127_2990574_38 VanZ like family - - - 0.0005641 50.0
BYD3_k127_2990574_4 FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 632.0
BYD3_k127_2990574_5 E3 component of 2-oxoglutarate dehydrogenase complex K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 569.0
BYD3_k127_2990574_6 AAA ATPase, central domain protein K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 563.0
BYD3_k127_2990574_7 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 554.0
BYD3_k127_2990574_8 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 496.0
BYD3_k127_2990574_9 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 472.0
BYD3_k127_3127283_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1234.0
BYD3_k127_3127283_1 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 8.782e-200 636.0
BYD3_k127_3127283_2 General Secretion Pathway protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 535.0
BYD3_k127_3127283_3 Belongs to the ClpA ClpB family K03694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 428.0
BYD3_k127_3127283_4 General secretion pathway protein F K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 423.0
BYD3_k127_3127283_5 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 302.0
BYD3_k127_3127283_6 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006282,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009914 270.0
BYD3_k127_3127283_7 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.00000000000000000000000000000000000000000000001473 187.0
BYD3_k127_3127283_8 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000001568 152.0
BYD3_k127_3127283_9 Type II secretion system protein C - - - 0.000000000000000000000000000000000003299 153.0
BYD3_k127_3179539_0 Homospermidine synthase K00808 - 2.5.1.44 2.372e-227 713.0
BYD3_k127_3179539_1 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 627.0
BYD3_k127_3179539_2 SMART Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008355 284.0
BYD3_k127_3179539_3 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000006351 205.0
BYD3_k127_3179539_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000004352 195.0
BYD3_k127_3179539_5 Methyltransferase type 11 - - - 0.00001884 48.0
BYD3_k127_320252_0 TonB dependent receptor K02014 - - 4.937e-310 977.0
BYD3_k127_320252_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 578.0
BYD3_k127_320252_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006166 467.0
BYD3_k127_320252_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007395 379.0
BYD3_k127_320252_4 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 335.0
BYD3_k127_320252_5 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000004841 215.0
BYD3_k127_320252_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005623,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.0000000000000000000000000000000000000000000000002555 183.0
BYD3_k127_3313741_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1322.0
BYD3_k127_3313741_1 Neisseria PilC beta-propeller domain K02674 - - 0.0 1108.0
BYD3_k127_3313741_10 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 480.0
BYD3_k127_3313741_11 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 457.0
BYD3_k127_3313741_12 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000512 448.0
BYD3_k127_3313741_13 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 448.0
BYD3_k127_3313741_14 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009417 439.0
BYD3_k127_3313741_15 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 409.0
BYD3_k127_3313741_16 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 434.0
BYD3_k127_3313741_17 Type IV Pilus-assembly protein W K02672 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 421.0
BYD3_k127_3313741_18 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 378.0
BYD3_k127_3313741_19 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004811 370.0
BYD3_k127_3313741_2 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 3.565e-284 883.0
BYD3_k127_3313741_20 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 363.0
BYD3_k127_3313741_21 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 340.0
BYD3_k127_3313741_22 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 349.0
BYD3_k127_3313741_23 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 345.0
BYD3_k127_3313741_24 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006767 328.0
BYD3_k127_3313741_25 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006139,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008254,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009129,GO:0009131,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009173,GO:0009175,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030145,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042578,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046049,GO:0046050,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 319.0
BYD3_k127_3313741_26 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005314 314.0
BYD3_k127_3313741_27 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 314.0
BYD3_k127_3313741_28 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 293.0
BYD3_k127_3313741_29 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000458 289.0
BYD3_k127_3313741_3 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 7.433e-282 887.0
BYD3_k127_3313741_30 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003631 278.0
BYD3_k127_3313741_31 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000003978 280.0
BYD3_k127_3313741_32 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002284 251.0
BYD3_k127_3313741_33 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000003998 221.0
BYD3_k127_3313741_34 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.000000000000000000000000000000000000000000000000000000000000658 220.0
BYD3_k127_3313741_35 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000003674 227.0
BYD3_k127_3313741_36 type IV pilus modification protein PilV K02671 - - 0.00000000000000000000000000000000000000000000000000000000002331 211.0
BYD3_k127_3313741_37 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000006898 218.0
BYD3_k127_3313741_38 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000007218 203.0
BYD3_k127_3313741_39 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000000007785 203.0
BYD3_k127_3313741_4 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 5.542e-252 788.0
BYD3_k127_3313741_40 Negative regulator of sigma E activity K03598 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0044464,GO:0045152 - 0.0000000000000000000000000000000000000000000001561 186.0
BYD3_k127_3313741_41 COG0739 Membrane proteins related to metalloendopeptidases K06194 - - 0.00000000000000000000000000000000000000000003706 178.0
BYD3_k127_3313741_42 Smr protein - - - 0.0000000000000000000000000000000000000002246 155.0
BYD3_k127_3313741_43 Belongs to the GcvT family K06980 GO:0003674,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0019842,GO:0022607,GO:0031163,GO:0031406,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0071840,GO:0072341,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000009753 147.0
BYD3_k127_3313741_44 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.0000000000000000000000000000000001599 138.0
BYD3_k127_3313741_45 Pilus assembly protein PilX - - - 0.00000000000000000000000000000003111 134.0
BYD3_k127_3313741_46 Prokaryotic N-terminal methylation motif K02655 - - 0.0000000000000000000000000000006229 126.0
BYD3_k127_3313741_47 COG4970 Tfp pilus assembly protein FimT K08084 - - 0.000000000000000000000000000002942 126.0
BYD3_k127_3313741_48 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0030428,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044464,GO:0051301 - 0.0000000000000000000005407 100.0
BYD3_k127_3313741_49 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000004189 102.0
BYD3_k127_3313741_5 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008773,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0019538,GO:0019752,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0070569,GO:0071704,GO:0140096,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.59 1.773e-250 801.0
BYD3_k127_3313741_50 Belongs to the skp family K06142 - - 0.0000000000000000000182 98.0
BYD3_k127_3313741_51 succinate dehydrogenase K00241 - - 0.0000000000000000000401 104.0
BYD3_k127_3313741_52 Succinate dehydrogenase, hydrophobic anchor subunit K00242 - - 0.00000000000003931 79.0
BYD3_k127_3313741_53 Flavinator of succinate dehydrogenase K09159 - - 0.0000000000003826 84.0
BYD3_k127_3313741_54 Sigma factor algU negative regulatory protein K03597 - - 0.000000002808 69.0
BYD3_k127_3313741_55 PFAM glutaredoxin 2 - - - 0.000000005532 59.0
BYD3_k127_3313741_6 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 7.208e-195 623.0
BYD3_k127_3313741_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 649.0
BYD3_k127_3313741_8 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 589.0
BYD3_k127_3313741_9 exonuclease RecJ K07462 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006683 542.0
BYD3_k127_3414613_0 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 396.0
BYD3_k127_3414613_1 Putative peptidoglycan binding domain K21470 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 382.0
BYD3_k127_3414613_2 Domain of Unknown Function (DUF748) - - - 0.000000000000000000000000000000000000000000000000000000000000000001636 240.0
BYD3_k127_3414613_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000001151 205.0
BYD3_k127_3414613_4 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000003325 196.0
BYD3_k127_3414613_5 Lipoprotein - - - 0.0000000000000000000000000000000000000000001184 168.0
BYD3_k127_3414613_6 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000001181 117.0
BYD3_k127_3414613_7 - - - - 0.00000000000000000000003387 106.0
BYD3_k127_3414613_8 COG2010 Cytochrome c, mono- and diheme variants - - - 0.00000000000000004427 93.0
BYD3_k127_3414613_9 Host attachment protein - - - 0.0000000000000003626 90.0
BYD3_k127_3600608_0 Tetratricopeptide repeat K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 423.0
BYD3_k127_3600608_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006243 269.0
BYD3_k127_3600608_10 Resolvase - - - 0.0000004394 53.0
BYD3_k127_3600608_11 Protein of unknown function (DUF1566) - - - 0.00000457 57.0
BYD3_k127_3600608_2 Involved in the tonB-independent uptake of proteins K03641,K10117 - - 0.000000000000000000000000000000000000000000000000000000000000001144 238.0
BYD3_k127_3600608_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000000002592 192.0
BYD3_k127_3600608_4 DNA-templated transcription, initiation K02405 - - 0.0000000000000000000000000000000000000000000000001065 183.0
BYD3_k127_3600608_5 Belongs to the small heat shock protein (HSP20) family - - - 0.000000000000000000000000000000000003058 142.0
BYD3_k127_3600608_6 PFAM Glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000001722 126.0
BYD3_k127_3600608_7 Protein of unknown function (DUF1566) - - - 0.000000000000001112 85.0
BYD3_k127_3601447_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 359.0
BYD3_k127_3601447_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006139 272.0
BYD3_k127_3601447_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000001556 229.0
BYD3_k127_3601447_3 Sulfotransferase domain - - - 0.000000000000000000000003229 104.0
BYD3_k127_3601447_4 - - - - 0.0000000000000005805 81.0
BYD3_k127_3689705_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.598e-216 697.0
BYD3_k127_3689705_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007157 606.0
BYD3_k127_3689705_2 NADP transhydrogenase K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 421.0
BYD3_k127_3689705_3 dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 317.0
BYD3_k127_3689705_4 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000000000000000000000001389 151.0
BYD3_k127_3689705_5 PFAM HNH endonuclease - - - 0.000000000000000006613 84.0
BYD3_k127_3689705_6 PspC domain - - - 0.0000000000000000305 86.0
BYD3_k127_3689705_7 Arginyl tRNA synthetase N terminal dom K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.00001183 49.0
BYD3_k127_3709018_0 Catalyzes the NAD( )-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non- methylotrophic organisms K00122 - 1.17.1.9 1.737e-220 689.0
BYD3_k127_3709018_1 Pfam Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 587.0
BYD3_k127_3709018_2 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 508.0
BYD3_k127_3709018_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 323.0
BYD3_k127_3709018_4 Belongs to the arginase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 313.0
BYD3_k127_3709018_5 PFAM Rhodanese domain protein K03892 - - 0.00000000000000000000000000000000000000000000000000000000000000003878 229.0
BYD3_k127_3709018_6 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000001062 209.0
BYD3_k127_3709018_7 Conserved protein containing a Zn-ribbon-like motif possibly RNA-binding - - - 0.00000000000000000000000000000000000000000000000004946 185.0
BYD3_k127_3709018_8 lipid kinase activity - - - 0.000000000000000000000000000000000000000000006812 175.0
BYD3_k127_3709018_9 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) - - - 0.0000000000000000001354 95.0
BYD3_k127_3730629_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 5.379e-261 817.0
BYD3_k127_3730629_1 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 610.0
BYD3_k127_3730629_2 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007849 402.0
BYD3_k127_3730629_3 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 309.0
BYD3_k127_3730629_4 PFAM Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001919 260.0
BYD3_k127_3730629_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000003357 87.0
BYD3_k127_3743247_0 Berberine and berberine like - - - 1.421e-256 798.0
BYD3_k127_3743247_1 RESPONSE REGULATOR receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 567.0
BYD3_k127_3743247_2 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 448.0
BYD3_k127_3743247_3 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 451.0
BYD3_k127_3743247_4 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 380.0
BYD3_k127_3743247_5 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008215 268.0
BYD3_k127_3743247_6 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000001185 253.0
BYD3_k127_3743247_7 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003811 241.0
BYD3_k127_3743247_8 glyoxalase III activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000006006 230.0
BYD3_k127_3743247_9 COG1233 Phytoene dehydrogenase and related proteins - - - 0.00000000000000000000002277 104.0
BYD3_k127_3950077_0 response regulator receiver K02487,K06596 - - 1.656e-308 1017.0
BYD3_k127_3950077_1 Large extracellular alpha-helical protein K09607 - - 2.563e-282 897.0
BYD3_k127_3950077_10 twitching motility protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 422.0
BYD3_k127_3950077_11 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006546 414.0
BYD3_k127_3950077_12 Bacterial extracellular solute-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 405.0
BYD3_k127_3950077_13 Prephenate dehydrogenase chorismate mutase K00210 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 402.0
BYD3_k127_3950077_14 chemotaxis protein K02660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005648 413.0
BYD3_k127_3950077_15 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 371.0
BYD3_k127_3950077_16 receptor K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 379.0
BYD3_k127_3950077_17 Oxidoreductase FAD-binding domain K02823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009237 357.0
BYD3_k127_3950077_18 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 357.0
BYD3_k127_3950077_19 COG0209 Ribonucleotide reductase, alpha subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 336.0
BYD3_k127_3950077_2 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 GO:0003674,GO:0003824,GO:0004015,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.6.1.62 1.454e-215 679.0
BYD3_k127_3950077_20 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 324.0
BYD3_k127_3950077_21 Inositol monophosphatase family K05602 - 3.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003085 285.0
BYD3_k127_3950077_22 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003806 281.0
BYD3_k127_3950077_23 adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000001926 263.0
BYD3_k127_3950077_24 N-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000004658 233.0
BYD3_k127_3950077_25 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000008162 235.0
BYD3_k127_3950077_26 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000005791 236.0
BYD3_k127_3950077_27 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000001354 229.0
BYD3_k127_3950077_28 response regulator receiver K02657 - - 0.0000000000000000000000000000000000000000000000000000000000004174 214.0
BYD3_k127_3950077_29 Belongs to the UPF0301 (AlgH) family K07735 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000669 229.0
BYD3_k127_3950077_3 PFAM aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K00256,K07303 - 1.3.99.16 4.071e-209 679.0
BYD3_k127_3950077_30 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000009226 218.0
BYD3_k127_3950077_31 Periplasmic binding protein K02016,K06858 - - 0.0000000000000000000000000000000000000000000000000000000004869 214.0
BYD3_k127_3950077_32 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000003812 201.0
BYD3_k127_3950077_33 X-Pro dipeptidyl-peptidase (S15 family) K07018 - - 0.0000000000000000000000000000000000000000000000000000002532 202.0
BYD3_k127_3950077_34 Iron-sulphur cluster biosynthesis K15724 - - 0.00000000000000000000000000000000000000000000000003442 181.0
BYD3_k127_3950077_35 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000001276 176.0
BYD3_k127_3950077_36 Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000001526 183.0
BYD3_k127_3950077_37 Peptidyl-prolyl cis-trans K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000001906 164.0
BYD3_k127_3950077_38 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000002271 156.0
BYD3_k127_3950077_39 cheY-homologous receiver domain K02658 - - 0.0000000000000000000000000000000000000006624 152.0
BYD3_k127_3950077_4 LOG family K06966 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016787,GO:0016798,GO:0016799,GO:0044424,GO:0044444,GO:0044464,GO:0047405 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 581.0
BYD3_k127_3950077_40 Two component signalling adaptor domain K02659 - - 0.00000000000000000000000000000000007565 140.0
BYD3_k127_3950077_41 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000002566 126.0
BYD3_k127_3950077_42 TIGRFAM TonB K03832 - - 0.00000000000000000000000007208 118.0
BYD3_k127_3950077_43 integral membrane protein K02221 - - 0.0000000000000000000000005899 110.0
BYD3_k127_3950077_45 chemotaxis signal transduction protein K06598 - - 0.0000000000000000003787 102.0
BYD3_k127_3950077_46 Belongs to the bacterial histone-like protein family - - - 0.000000000000000001697 100.0
BYD3_k127_3950077_47 - - - - 0.0000000000001643 76.0
BYD3_k127_3950077_48 - - - - 0.0000000002504 70.0
BYD3_k127_3950077_49 - - - - 0.0000001996 53.0
BYD3_k127_3950077_5 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 561.0
BYD3_k127_3950077_6 twitching motility protein K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005765 529.0
BYD3_k127_3950077_7 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 526.0
BYD3_k127_3950077_8 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 491.0
BYD3_k127_3950077_9 Binding-protein-dependent transport system inner membrane component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 470.0
BYD3_k127_3955874_0 Aspartyl/Asparaginyl beta-hydroxylase K00476,K12979 - 1.14.11.16 0.0000000000000000000000000000000000000000000000000005278 187.0
BYD3_k127_3955874_1 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000002918 163.0
BYD3_k127_3955874_2 - - - - 0.000000000000000001698 99.0
BYD3_k127_3955874_3 - - - - 0.00001723 55.0
BYD3_k127_3998193_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 1.474e-269 872.0
BYD3_k127_3998193_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 619.0
BYD3_k127_3998193_2 HELICc2 K03722 GO:0003674,GO:0003824,GO:0004386,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008026,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0070035,GO:0071704,GO:0090304,GO:1901360 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007311 607.0
BYD3_k127_3998193_3 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269 470.0
BYD3_k127_3998193_4 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 346.0
BYD3_k127_3998193_5 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 297.0
BYD3_k127_3998193_6 Putative porin - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000001413 192.0
BYD3_k127_3998193_7 glycoprotease K14742 - - 0.0000000000000000000000000000000000000000000001784 192.0
BYD3_k127_4268615_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 7.078e-253 809.0
BYD3_k127_4268615_1 Prolyl oligopeptidase family - - - 7.463e-240 760.0
BYD3_k127_4268615_10 Phosphoglucose isomerase K01810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 481.0
BYD3_k127_4268615_11 Phosphoadenosine phosphosulfate reductase family K00390,K00957 - 1.8.4.10,1.8.4.8,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 466.0
BYD3_k127_4268615_12 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 422.0
BYD3_k127_4268615_13 aromatic amino acid beta-eliminating lyase threonine aldolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008803 422.0
BYD3_k127_4268615_14 lytic transglycosylase K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 399.0
BYD3_k127_4268615_15 Capsule assembly protein Wzi - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 392.0
BYD3_k127_4268615_16 Catalyzes a key regulatory step in fatty acid biosynthesis K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 349.0
BYD3_k127_4268615_17 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342,K14159 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7,3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005518 284.0
BYD3_k127_4268615_18 ADP-L-glycero-beta-D-manno-heptose biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000693 285.0
BYD3_k127_4268615_19 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009453 276.0
BYD3_k127_4268615_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 2.209e-204 644.0
BYD3_k127_4268615_20 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000001449 281.0
BYD3_k127_4268615_21 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000009036 266.0
BYD3_k127_4268615_22 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000001015 245.0
BYD3_k127_4268615_23 Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP- C55) K13007 - - 0.0000000000000000000000000000000000000000000000000000000000000000006391 241.0
BYD3_k127_4268615_24 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001665 245.0
BYD3_k127_4268615_25 Polysaccharide pyruvyl transferase - - - 0.0000000000000000000000000000000000000000000000000000007091 208.0
BYD3_k127_4268615_26 Glycosyl transferase 4-like - - - 0.00000000000000000000000000000000000000000001075 183.0
BYD3_k127_4268615_27 PFAM lipopolysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000008789 168.0
BYD3_k127_4268615_28 - - - - 0.00000000000000000000000000000000000000001161 164.0
BYD3_k127_4268615_29 PFAM methyltransferase - - - 0.000000000000000000000000000000000000007965 155.0
BYD3_k127_4268615_3 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008499 609.0
BYD3_k127_4268615_30 Sulfotransferase domain - - - 0.00000000000000000000000000000000004515 147.0
BYD3_k127_4268615_31 Sulfotransferase family - - - 0.0000000000000000005755 102.0
BYD3_k127_4268615_32 - - - - 0.0000000000000000008934 97.0
BYD3_k127_4268615_33 - - - - 0.00000000000000006632 84.0
BYD3_k127_4268615_34 Sulfotransferase family - - - 0.00000000000006463 85.0
BYD3_k127_4268615_35 - - - - 0.000000000001037 70.0
BYD3_k127_4268615_36 Integrase core domain - - - 0.000000000002306 68.0
BYD3_k127_4268615_37 Phosphopantetheine attachment site - - - 0.0000000009838 68.0
BYD3_k127_4268615_38 Acetyltransferase (GNAT) domain - - - 0.000000009046 67.0
BYD3_k127_4268615_39 Transposase and inactivated derivatives K05349 - 3.2.1.21 0.00000001028 58.0
BYD3_k127_4268615_4 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004138 605.0
BYD3_k127_4268615_40 transposition K07497 - - 0.000004674 53.0
BYD3_k127_4268615_41 COG2801 Transposase and inactivated derivatives - - - 0.0000283 51.0
BYD3_k127_4268615_5 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004441 612.0
BYD3_k127_4268615_6 Polysaccharide biosynthesis/export protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007941 619.0
BYD3_k127_4268615_7 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 596.0
BYD3_k127_4268615_8 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840,K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 590.0
BYD3_k127_4268615_9 PFAM NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 529.0
BYD3_k127_4292362_0 copper resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 482.0
BYD3_k127_4292362_1 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000138 284.0
BYD3_k127_4292362_2 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000009425 238.0
BYD3_k127_4292362_3 Beta-L-arabinofuranosidase, GH127 - - - 0.000000000000000000000000000000000000000000000000153 190.0
BYD3_k127_4292362_4 - - - - 0.0000000000000000000000000000000000001084 147.0
BYD3_k127_4292362_5 Fibronectin type 3 domain - - - 0.00000007936 64.0
BYD3_k127_4579582_0 WYL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 409.0
BYD3_k127_4579582_1 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007013 381.0
BYD3_k127_4579582_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001343 264.0
BYD3_k127_4579582_3 Lysine exporter protein LysE YggA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003 249.0
BYD3_k127_4579582_4 NIPSNAP - - - 0.00000000000000000000000000000000000000000000000000000000000008192 223.0
BYD3_k127_4579582_6 Protein of unknown function (DUF952) - - - 0.0000000000000000000000000005756 117.0
BYD3_k127_4579582_7 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431,K12251 - 3.5.1.53,3.5.1.6 0.0000001389 53.0
BYD3_k127_4580022_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.083e-312 968.0
BYD3_k127_4580022_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 547.0
BYD3_k127_4580022_2 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007037 493.0
BYD3_k127_4580022_3 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 370.0
BYD3_k127_4580022_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007294 249.0
BYD3_k127_4580022_5 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000000000000000000000002039 244.0
BYD3_k127_4580022_6 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.0000000000000000000000000000000000000000003263 162.0
BYD3_k127_4580022_7 Cellulose synthase operon protein C C-terminus (BCSC_C) K20543 - - 0.00000000000000000000000000000000000536 157.0
BYD3_k127_4580022_8 competence protein ComEA K02237 - - 0.000000000000005734 86.0
BYD3_k127_4670113_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 5.355e-289 914.0
BYD3_k127_4670113_1 COG1233 Phytoene dehydrogenase and related proteins - - - 1.067e-229 721.0
BYD3_k127_4670113_10 Nicotinate phosphoribosyltransferase (NAPRTase) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 524.0
BYD3_k127_4670113_11 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 540.0
BYD3_k127_4670113_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 502.0
BYD3_k127_4670113_13 Pyridoxal-dependent decarboxylase conserved domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 488.0
BYD3_k127_4670113_14 Carboxylesterase family K03929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004499 497.0
BYD3_k127_4670113_15 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006932 478.0
BYD3_k127_4670113_16 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 466.0
BYD3_k127_4670113_17 Phytoene dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005993 473.0
BYD3_k127_4670113_18 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 453.0
BYD3_k127_4670113_19 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 449.0
BYD3_k127_4670113_2 Circadian clock protein KaiC K08482 - - 1.646e-227 714.0
BYD3_k127_4670113_20 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 398.0
BYD3_k127_4670113_21 decarboxylase K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008787 395.0
BYD3_k127_4670113_22 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 376.0
BYD3_k127_4670113_23 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 376.0
BYD3_k127_4670113_24 Phosphoenolpyruvate phosphomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 347.0
BYD3_k127_4670113_25 TIGRFAM phenazine biosynthesis protein PhzF family K06998 - 5.3.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 338.0
BYD3_k127_4670113_26 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000383 319.0
BYD3_k127_4670113_27 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 306.0
BYD3_k127_4670113_28 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003938 286.0
BYD3_k127_4670113_29 3-demethylubiquinone-9 3-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001039 248.0
BYD3_k127_4670113_3 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 1.371e-219 705.0
BYD3_k127_4670113_30 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000007466 250.0
BYD3_k127_4670113_31 Isochorismatase family K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000007134 230.0
BYD3_k127_4670113_32 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000001176 226.0
BYD3_k127_4670113_33 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000009355 219.0
BYD3_k127_4670113_34 calcium, potassium:sodium antiporter activity K07301 - - 0.00000000000000000000000000000000000000000000000000000001035 223.0
BYD3_k127_4670113_35 Low affinity iron permease - - - 0.00000000000000000000000000000000000000000000000000006568 189.0
BYD3_k127_4670113_36 - - - - 0.000000000000000000000000000000000000000000000000000593 192.0
BYD3_k127_4670113_38 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000003577 171.0
BYD3_k127_4670113_39 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000004719 167.0
BYD3_k127_4670113_4 Belongs to the BCCT transporter (TC 2.A.15) family K03451 - - 1.196e-198 632.0
BYD3_k127_4670113_40 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000003468 163.0
BYD3_k127_4670113_41 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000009318 158.0
BYD3_k127_4670113_42 Glutathione-dependent formaldehyde-activating enzyme family protein 4 - - - 0.000000000000000000000000000000001012 143.0
BYD3_k127_4670113_43 FR47-like protein - - - 0.000000000000000000000000000000005962 134.0
BYD3_k127_4670113_44 - - - - 0.000000000000000000000000000000008364 140.0
BYD3_k127_4670113_45 COG2076 Membrane transporters of cations and cationic drugs K11741 - - 0.00000000000000000000000000000001501 130.0
BYD3_k127_4670113_46 peroxidase - - - 0.00000000000000000000000001562 108.0
BYD3_k127_4670113_47 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000008094 122.0
BYD3_k127_4670113_48 membrane - - - 0.00000000000000000000006807 105.0
BYD3_k127_4670113_49 cheY-homologous receiver domain - - - 0.0000000000000000000001473 102.0
BYD3_k127_4670113_5 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 573.0
BYD3_k127_4670113_50 YjbR - - - 0.00000000000000000000806 95.0
BYD3_k127_4670113_52 Membrane-bound lysozyme-inhibitor of c-type lysozyme - - - 0.00000000000001284 87.0
BYD3_k127_4670113_53 Protein conserved in bacteria K09914 - - 0.000000000000017 87.0
BYD3_k127_4670113_55 Acetyltransferase (GNAT) domain - - - 0.0000000002324 70.0
BYD3_k127_4670113_56 Chagasin family peptidase inhibitor I42 K14475 - - 0.000000001413 66.0
BYD3_k127_4670113_58 - - - - 0.000001945 55.0
BYD3_k127_4670113_6 glutamate decarboxylase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 572.0
BYD3_k127_4670113_7 PFAM FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 571.0
BYD3_k127_4670113_8 Trimethylamine methyltransferase (MTTB) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005057 589.0
BYD3_k127_4670113_9 helix_turn_helix, Lux Regulon K03556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 573.0
BYD3_k127_4702888_0 epimerase dehydratase K08678 - 4.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 608.0
BYD3_k127_4702888_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 582.0
BYD3_k127_4702888_10 Belongs to the P-Pant transferase superfamily K06133 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008897,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0019752,GO:0019878,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.0000000000000000000000007589 121.0
BYD3_k127_4702888_11 ATP-grasp enzyme - - - 0.0000000000000001359 84.0
BYD3_k127_4702888_2 homoserine dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 509.0
BYD3_k127_4702888_3 Glucose-1-phosphate cytidylyltransferase K00978,K15669 - 2.7.7.33,2.7.7.71 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 378.0
BYD3_k127_4702888_4 Beta- ketoacyl synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 323.0
BYD3_k127_4702888_5 ATP-grasp - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001037 255.0
BYD3_k127_4702888_6 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000009252 243.0
BYD3_k127_4702888_7 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008830,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0045226,GO:0046379,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000001128 236.0
BYD3_k127_4702888_8 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000002377 150.0
BYD3_k127_4702888_9 Sulfotransferase domain - - - 0.000000000000000000000000000000000004519 153.0
BYD3_k127_4904797_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1160.0
BYD3_k127_4904797_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 5.579e-267 833.0
BYD3_k127_4904797_10 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 328.0
BYD3_k127_4904797_11 PFAM Short-chain dehydrogenase reductase SDR - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0008150,GO:0008152,GO:0009056,GO:0016491,GO:0044464,GO:0055114,GO:0071704,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002792 260.0
BYD3_k127_4904797_12 Belongs to the SUA5 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004171 253.0
BYD3_k127_4904797_13 HAD-hyrolase-like K01091,K22292 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006040,GO:0006082,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009254,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019752,GO:0030203,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097172,GO:1901135,GO:1901360,GO:1901564 3.1.3.105,3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000004511 252.0
BYD3_k127_4904797_14 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000005047 256.0
BYD3_k127_4904797_15 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000009961 228.0
BYD3_k127_4904797_16 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000005447 240.0
BYD3_k127_4904797_17 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000000000003776 198.0
BYD3_k127_4904797_18 peptidylprolyl isomerase K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000001344 181.0
BYD3_k127_4904797_19 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000001595 160.0
BYD3_k127_4904797_2 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 577.0
BYD3_k127_4904797_20 Belongs to the BolA IbaG family K05527 - - 0.0000000000000000000375 93.0
BYD3_k127_4904797_3 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 497.0
BYD3_k127_4904797_4 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 471.0
BYD3_k127_4904797_5 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 469.0
BYD3_k127_4904797_6 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 428.0
BYD3_k127_4904797_7 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 409.0
BYD3_k127_4904797_8 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 376.0
BYD3_k127_4904797_9 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 317.0
BYD3_k127_4908890_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1504.0
BYD3_k127_4908890_1 TonB dependent receptor - - - 1.197e-311 985.0
BYD3_k127_4908890_10 Dihydroorotate dehydrogenase - - - 6.286e-217 684.0
BYD3_k127_4908890_11 Acetylornithine deacetylase Succinyl-diaminopimelate - - - 5.832e-196 623.0
BYD3_k127_4908890_12 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004592 585.0
BYD3_k127_4908890_13 cystathionine K01758 - 4.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 579.0
BYD3_k127_4908890_14 Cystathionine beta-synthase K01697 - 4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 584.0
BYD3_k127_4908890_15 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K17722 - 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 561.0
BYD3_k127_4908890_16 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 572.0
BYD3_k127_4908890_17 Acetylornithine deacetylase Succinyl-diaminopimelate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 545.0
BYD3_k127_4908890_18 integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 518.0
BYD3_k127_4908890_19 amine dehydrogenase activity K17285 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 491.0
BYD3_k127_4908890_2 Proton-conducting membrane transporter - - - 3.22e-296 926.0
BYD3_k127_4908890_20 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 488.0
BYD3_k127_4908890_21 Carbon-nitrogen hydrolase K01431 - 3.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 476.0
BYD3_k127_4908890_22 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 475.0
BYD3_k127_4908890_23 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 449.0
BYD3_k127_4908890_24 Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 439.0
BYD3_k127_4908890_25 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 440.0
BYD3_k127_4908890_26 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003543 391.0
BYD3_k127_4908890_27 alpha/beta hydrolase fold K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006257 400.0
BYD3_k127_4908890_28 beta-hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 395.0
BYD3_k127_4908890_29 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007972 388.0
BYD3_k127_4908890_3 WD40-like Beta Propeller Repeat - - - 2.562e-273 857.0
BYD3_k127_4908890_30 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 394.0
BYD3_k127_4908890_31 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009021 360.0
BYD3_k127_4908890_32 COG0277 FAD FMN-containing dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 366.0
BYD3_k127_4908890_33 COG4237 Hydrogenase 4 membrane component (E) K12140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 355.0
BYD3_k127_4908890_34 Peptidase S15 K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007791 348.0
BYD3_k127_4908890_35 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005566 331.0
BYD3_k127_4908890_36 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 326.0
BYD3_k127_4908890_37 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 328.0
BYD3_k127_4908890_38 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 321.0
BYD3_k127_4908890_39 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 315.0
BYD3_k127_4908890_4 TonB dependent receptor K02014 - - 1.003e-258 816.0
BYD3_k127_4908890_40 Putative sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 305.0
BYD3_k127_4908890_41 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000318 275.0
BYD3_k127_4908890_42 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009124 286.0
BYD3_k127_4908890_43 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001655 276.0
BYD3_k127_4908890_44 Alternative locus ID - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001187 268.0
BYD3_k127_4908890_45 Putative zinc-binding metallo-peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002545 271.0
BYD3_k127_4908890_46 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003123 271.0
BYD3_k127_4908890_47 signal peptide protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003571 261.0
BYD3_k127_4908890_48 PFAM helix-turn-helix- domain containing protein AraC type K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000005161 258.0
BYD3_k127_4908890_49 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001573 252.0
BYD3_k127_4908890_5 receptor K16090 - - 4.253e-252 796.0
BYD3_k127_4908890_50 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004169 241.0
BYD3_k127_4908890_51 Truncated hemoglobins K06886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006249 240.0
BYD3_k127_4908890_52 PKHD-type hydroxylase K07336 - - 0.00000000000000000000000000000000000000000000000000000000000000000001753 239.0
BYD3_k127_4908890_53 - - - - 0.0000000000000000000000000000000000000000000000000000000000000007461 232.0
BYD3_k127_4908890_54 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000000000006989 225.0
BYD3_k127_4908890_55 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000007375 225.0
BYD3_k127_4908890_56 deaminase activity K01485 GO:0003674,GO:0003824,GO:0004131,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006206,GO:0006213,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009119,GO:0009451,GO:0009987,GO:0016070,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019858,GO:0034641,GO:0034654,GO:0043094,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046087,GO:0046131,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 3.5.4.1 0.0000000000000000000000000000000000000000000000000000000000001593 231.0
BYD3_k127_4908890_57 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000001098 199.0
BYD3_k127_4908890_58 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.00000000000000000000000000000000000000000000000000001723 194.0
BYD3_k127_4908890_59 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000009184 177.0
BYD3_k127_4908890_6 Proton-conducting membrane transporter K12141 - - 6.408e-247 781.0
BYD3_k127_4908890_60 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000681 172.0
BYD3_k127_4908890_61 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000003837 179.0
BYD3_k127_4908890_62 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000005382 164.0
BYD3_k127_4908890_63 Protein of unknown function (DUF4199) - - - 0.000000000000000000000000000000000000000001959 166.0
BYD3_k127_4908890_64 ADP-ribosylglycohydrolase - - - 0.000000000000000000000000000000000000000006072 177.0
BYD3_k127_4908890_65 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000000000000002011 156.0
BYD3_k127_4908890_66 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.0000000000000000000000000000000000000002535 167.0
BYD3_k127_4908890_67 synthesis repressor, PhaR - - - 0.000000000000000000000000000000000000003459 151.0
BYD3_k127_4908890_68 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000001128 153.0
BYD3_k127_4908890_69 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000199 156.0
BYD3_k127_4908890_7 dihydroorotase - - - 3.967e-235 759.0
BYD3_k127_4908890_70 PadR family transcriptional regulator K10947 - - 0.00000000000000000000000000000000002347 138.0
BYD3_k127_4908890_71 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000007538 137.0
BYD3_k127_4908890_72 PQQ-like domain - - - 0.000000000000000000000000000000007978 130.0
BYD3_k127_4908890_73 Protein of unknown function (DUF2938) - - - 0.00000000000000000000000000000001539 139.0
BYD3_k127_4908890_74 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000006594 126.0
BYD3_k127_4908890_75 - - - - 0.00000000000000000000000000000008915 130.0
BYD3_k127_4908890_76 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000000000001045 133.0
BYD3_k127_4908890_77 PFAM RNP-1 like RNA-binding protein - - - 0.0000000000000000000000000000421 118.0
BYD3_k127_4908890_78 Dual specificity phosphatase, catalytic domain - - - 0.00000000000000000000000000004644 135.0
BYD3_k127_4908890_79 Transcriptional regulator - - - 0.0000000000000000000000000001136 119.0
BYD3_k127_4908890_8 NADH-ubiquinone oxidoreductase chain 49kDa - - - 1.763e-234 747.0
BYD3_k127_4908890_80 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000002029 121.0
BYD3_k127_4908890_81 - - - - 0.0000000000000000000000003967 115.0
BYD3_k127_4908890_82 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.00000000000000000000001676 110.0
BYD3_k127_4908890_83 - - - - 0.0000000000000000000005165 98.0
BYD3_k127_4908890_84 - - - - 0.0000000000000000001597 99.0
BYD3_k127_4908890_85 Lysyl oxidase - - - 0.000000000000000005076 96.0
BYD3_k127_4908890_86 Lysyl oxidase - - - 0.00000000000000002524 94.0
BYD3_k127_4908890_87 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.00000000000007097 73.0
BYD3_k127_4908890_88 helix_turn_helix, Lux Regulon K02479,K07684 - - 0.00000000000119 78.0
BYD3_k127_4908890_89 domain, Protein K03615,K09690 - - 0.000000000001415 81.0
BYD3_k127_4908890_9 uracil, thiamine, allantoin K03457 - - 4.565e-230 721.0
BYD3_k127_4908890_91 SMART Water Stress and Hypersensitive response - - - 0.000000000005812 73.0
BYD3_k127_4908890_93 Protein of unknown function (DUF3187) - - - 0.00000000167 69.0
BYD3_k127_4908890_94 - - - - 0.00002284 55.0
BYD3_k127_4908890_95 Protein of unknown function (DUF1566) - - - 0.000543 50.0
BYD3_k127_49527_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1346.0
BYD3_k127_49527_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 344.0
BYD3_k127_49527_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 293.0
BYD3_k127_49527_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000002024 231.0
BYD3_k127_49527_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000005222 211.0
BYD3_k127_49527_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000002525 152.0
BYD3_k127_49527_6 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000000000000000004556 85.0
BYD3_k127_5039256_0 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 5.762e-212 683.0
BYD3_k127_5039256_1 Type II secretory pathway, component HofQ K02666 - - 3.988e-194 630.0
BYD3_k127_5039256_2 Pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 368.0
BYD3_k127_5039256_3 Pilus assembly protein PilO K02664 - - 0.00000000000000000000000000000000000000000000000000001039 199.0
BYD3_k127_5039256_4 PFAM Fimbrial assembly K02663 - - 0.00000000000000000000000000000000000000001112 161.0
BYD3_k127_5039256_5 pilus assembly protein pilp K02665 - - 0.00000000000000000000000000000000001999 151.0
BYD3_k127_5068802_0 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 451.0
BYD3_k127_5068802_1 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 375.0
BYD3_k127_5068802_2 two component, sigma54 specific, transcriptional regulator, Fis family K07714,K07715 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 374.0
BYD3_k127_5068802_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 349.0
BYD3_k127_5068802_4 Sulfotransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005041 261.0
BYD3_k127_5068802_5 GTP-binding protein TypA K06207 - - 0.000000000000000000000000000000000000000000000000000000000000000000002302 238.0
BYD3_k127_5209208_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 4.354e-248 777.0
BYD3_k127_5209208_1 Heavy metal translocating P-type atpase K17686 - 3.6.3.54 9.271e-204 642.0
BYD3_k127_5209208_10 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 363.0
BYD3_k127_5209208_11 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 347.0
BYD3_k127_5209208_12 N-formylglutamate amidohydrolase K01458,K01479 - 3.5.1.68,3.5.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 366.0
BYD3_k127_5209208_13 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 335.0
BYD3_k127_5209208_14 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 317.0
BYD3_k127_5209208_15 ABC transporter K09697 - 3.6.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 324.0
BYD3_k127_5209208_16 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 298.0
BYD3_k127_5209208_17 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 304.0
BYD3_k127_5209208_18 PFAM O-methyltransferase family 3 K00588 - 2.1.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 293.0
BYD3_k127_5209208_19 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007042 297.0
BYD3_k127_5209208_2 Prolyl oligopeptidase family - - - 1.672e-202 650.0
BYD3_k127_5209208_20 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005017 273.0
BYD3_k127_5209208_21 glutathione s-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000001535 277.0
BYD3_k127_5209208_22 NADPH-dependent FMN reductase K19784 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007168 244.0
BYD3_k127_5209208_23 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000000000000000006611 233.0
BYD3_k127_5209208_24 Sodium ABC transporter permease K09696 - - 0.0000000000000000000000000000000000000000000000000000000000008518 229.0
BYD3_k127_5209208_25 Glutathione peroxidase K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000001619 196.0
BYD3_k127_5209208_26 COG1309 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000002975 190.0
BYD3_k127_5209208_27 Cytochrome c - - - 0.00000000000000000000000000000000000000000007746 168.0
BYD3_k127_5209208_28 Sigma-70 region 2 - - - 0.0000000000000000000000000000006908 128.0
BYD3_k127_5209208_29 GCN5-related N-acetyl-transferase K06975 - - 0.000000000000000000000001497 115.0
BYD3_k127_5209208_3 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000552 526.0
BYD3_k127_5209208_32 SnoaL-like domain - - - 0.00000000000188 75.0
BYD3_k127_5209208_34 Outer membrane protein beta-barrel domain - - - 0.000002393 58.0
BYD3_k127_5209208_4 Amidohydrolase family K05603 - 3.5.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005883 522.0
BYD3_k127_5209208_5 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 495.0
BYD3_k127_5209208_6 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 459.0
BYD3_k127_5209208_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007848 438.0
BYD3_k127_5209208_8 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 394.0
BYD3_k127_5209208_9 TAP-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 374.0
BYD3_k127_5244629_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1547.0
BYD3_k127_5244629_1 FAD binding domain K07077 - - 1.246e-215 682.0
BYD3_k127_5244629_10 Transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613 346.0
BYD3_k127_5244629_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 338.0
BYD3_k127_5244629_12 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 332.0
BYD3_k127_5244629_13 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006522 307.0
BYD3_k127_5244629_14 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 288.0
BYD3_k127_5244629_15 Phosphorylase superfamily K03784 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002036 274.0
BYD3_k127_5244629_16 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000004105 278.0
BYD3_k127_5244629_17 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000651 262.0
BYD3_k127_5244629_18 TPM domain K06872 - - 0.000000000000000000000000000000000000000000000000000000000000000000112 260.0
BYD3_k127_5244629_19 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000000000000000000000009686 230.0
BYD3_k127_5244629_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 613.0
BYD3_k127_5244629_20 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000001819 231.0
BYD3_k127_5244629_21 Alpha beta hydrolase K14731 - 3.1.1.83 0.0000000000000000000000000000000000000000000000000000001168 205.0
BYD3_k127_5244629_22 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000001994 185.0
BYD3_k127_5244629_23 TPM domain - - - 0.00000000000000000000000000000000000000000000000002018 183.0
BYD3_k127_5244629_24 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000004446 186.0
BYD3_k127_5244629_25 Belongs to the UPF0758 family K03630 GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000006926 182.0
BYD3_k127_5244629_26 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000003341 175.0
BYD3_k127_5244629_27 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000001431 166.0
BYD3_k127_5244629_28 Phosphorylase superfamily K01243 - 3.2.2.9 0.000000000000000000000000000000000000001483 155.0
BYD3_k127_5244629_29 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000000000551 146.0
BYD3_k127_5244629_3 Major facilitator superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000435 494.0
BYD3_k127_5244629_30 transcriptional - - - 0.0000000000000000000000000000004955 135.0
BYD3_k127_5244629_31 Putative phosphatase (DUF442) - - - 0.000000000000000000000000000001245 126.0
BYD3_k127_5244629_32 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.0000000000000000000000000001842 121.0
BYD3_k127_5244629_33 Putative adhesin - - - 0.0000000000000000000000007321 116.0
BYD3_k127_5244629_34 Protein of unknown function (DUF2892) - - - 0.000000000000000000001289 103.0
BYD3_k127_5244629_35 Domain of unknown function (DUF4124) - - - 0.0000000000000000002045 97.0
BYD3_k127_5244629_36 AsmA family - - - 0.000000000000000008927 96.0
BYD3_k127_5244629_37 - - - - 0.0000004184 62.0
BYD3_k127_5244629_4 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00758 - 2.4.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 458.0
BYD3_k127_5244629_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 452.0
BYD3_k127_5244629_6 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 441.0
BYD3_k127_5244629_7 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 393.0
BYD3_k127_5244629_8 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 366.0
BYD3_k127_5244629_9 Dehydrogenase K15054 - 1.1.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005932 357.0
BYD3_k127_5245537_0 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 0.0 1012.0
BYD3_k127_5245537_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 4.042e-295 919.0
BYD3_k127_5245537_10 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 572.0
BYD3_k127_5245537_11 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 527.0
BYD3_k127_5245537_12 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 510.0
BYD3_k127_5245537_13 protein conserved in bacteria K09989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 511.0
BYD3_k127_5245537_14 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009079 505.0
BYD3_k127_5245537_15 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 489.0
BYD3_k127_5245537_16 AAA domain (Cdc48 subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 454.0
BYD3_k127_5245537_17 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 424.0
BYD3_k127_5245537_18 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 429.0
BYD3_k127_5245537_19 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 377.0
BYD3_k127_5245537_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 4.429e-248 773.0
BYD3_k127_5245537_20 abc transporter atp-binding protein K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005274 342.0
BYD3_k127_5245537_21 MraW methylase family K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 325.0
BYD3_k127_5245537_22 Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6-phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS K06958 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009085 306.0
BYD3_k127_5245537_23 Belongs to the peptidase S1C family K04691,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009897,GO:0009986,GO:0009987,GO:0010033,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0033554,GO:0035966,GO:0035967,GO:0042221,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0051788,GO:0070011,GO:0070887,GO:0071218,GO:0071310,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 313.0
BYD3_k127_5245537_24 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 297.0
BYD3_k127_5245537_25 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001309 288.0
BYD3_k127_5245537_26 PFAM LppC K07121 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002845 282.0
BYD3_k127_5245537_27 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000004492 252.0
BYD3_k127_5245537_28 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000159 252.0
BYD3_k127_5245537_29 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000004256 239.0
BYD3_k127_5245537_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 5.536e-196 619.0
BYD3_k127_5245537_30 Cytochrome C1 family K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000002203 244.0
BYD3_k127_5245537_31 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.000000000000000000000000000000000000000000000000000000000003264 216.0
BYD3_k127_5245537_32 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000000000000000000000002552 189.0
BYD3_k127_5245537_33 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000001446 183.0
BYD3_k127_5245537_34 protein conserved in bacteria K09973 - - 0.000000000000000000000000000000000000000000111 172.0
BYD3_k127_5245537_35 PFAM CAAX amino terminal protease family K07052 - - 0.000000000000000000000000000000000000000005942 171.0
BYD3_k127_5245537_36 hydrolase activity, acting on ester bonds K01259 - 3.4.11.5 0.00000000000000000000000000000000000000005963 165.0
BYD3_k127_5245537_37 peptidase S16, lon K07157 - - 0.0000000000000000000000000000000000000402 164.0
BYD3_k127_5245537_38 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.00000000000000000000000000000000000005352 149.0
BYD3_k127_5245537_39 Sigma 54 modulation protein K05808 - - 0.0000000000000000000000000000000000002358 143.0
BYD3_k127_5245537_4 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 609.0
BYD3_k127_5245537_40 Stringent starvation protein B K03600 - - 0.000000000000000000000000000000000007625 139.0
BYD3_k127_5245537_41 Belongs to the UPF0102 family K07460 - - 0.000000000000000001806 100.0
BYD3_k127_5245537_42 LppC putative lipoprotein - - - 0.00000000000000003675 85.0
BYD3_k127_5245537_43 Belongs to the BolA IbaG family - - - 0.0000000000000000696 82.0
BYD3_k127_5245537_44 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.00000000001519 74.0
BYD3_k127_5245537_45 - - - - 0.0000003531 63.0
BYD3_k127_5245537_46 lipopolysaccharide transmembrane transporter activity K02040,K11719 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015920,GO:0016020,GO:0016021,GO:0017089,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 - 0.000001734 59.0
BYD3_k127_5245537_47 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009279,GO:0010876,GO:0015920,GO:0016020,GO:0017089,GO:0019867,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044462,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 - 0.0006424 50.0
BYD3_k127_5245537_5 Penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 631.0
BYD3_k127_5245537_6 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000675 610.0
BYD3_k127_5245537_7 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 574.0
BYD3_k127_5245537_8 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 580.0
BYD3_k127_5245537_9 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009909 575.0
BYD3_k127_5245680_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 600.0
BYD3_k127_5245680_1 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 564.0
BYD3_k127_5245680_10 abc transporter atp-binding protein K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 311.0
BYD3_k127_5245680_11 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009339 298.0
BYD3_k127_5245680_12 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001972 294.0
BYD3_k127_5245680_13 PFAM LppC K07121 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005682 276.0
BYD3_k127_5245680_14 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000002295 245.0
BYD3_k127_5245680_15 Cytochrome C1 family K00413 - - 0.0000000000000000000000000000000000000000000000000000000000003241 235.0
BYD3_k127_5245680_16 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000000000000000007554 190.0
BYD3_k127_5245680_17 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.000000000000000000000000000000000000001312 153.0
BYD3_k127_5245680_18 stringent starvation protein b K03600 - - 0.000000000000000000000000000000000005561 140.0
BYD3_k127_5245680_19 Belongs to the UPF0102 family K07460 - - 0.00000000000000000008864 101.0
BYD3_k127_5245680_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 531.0
BYD3_k127_5245680_20 LppC putative lipoprotein - - - 0.0000000000000000001249 92.0
BYD3_k127_5245680_21 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000002237 100.0
BYD3_k127_5245680_22 Belongs to the BolA IbaG family - - - 0.000000000000000004005 86.0
BYD3_k127_5245680_23 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.00000000000000003081 82.0
BYD3_k127_5245680_24 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000003286 81.0
BYD3_k127_5245680_25 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.0000000005763 70.0
BYD3_k127_5245680_26 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 - - 0.00001215 55.0
BYD3_k127_5245680_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 509.0
BYD3_k127_5245680_4 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 437.0
BYD3_k127_5245680_5 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009505 454.0
BYD3_k127_5245680_6 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007213 433.0
BYD3_k127_5245680_7 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 397.0
BYD3_k127_5245680_8 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 318.0
BYD3_k127_5245680_9 Belongs to the peptidase S1C family K04691,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009897,GO:0009986,GO:0009987,GO:0010033,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0033554,GO:0035966,GO:0035967,GO:0042221,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0051788,GO:0070011,GO:0070887,GO:0071218,GO:0071310,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 321.0
BYD3_k127_5384635_0 Prokaryotic glutathione synthetase, ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 0.0 1533.0
BYD3_k127_5384635_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1131.0
BYD3_k127_5384635_10 NAD-dependent epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 303.0
BYD3_k127_5384635_11 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 301.0
BYD3_k127_5384635_12 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002507 285.0
BYD3_k127_5384635_13 PFAM Short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000005681 268.0
BYD3_k127_5384635_14 aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000001208 256.0
BYD3_k127_5384635_15 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000002835 204.0
BYD3_k127_5384635_16 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000001859 188.0
BYD3_k127_5384635_17 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000001094 141.0
BYD3_k127_5384635_18 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000008562 145.0
BYD3_k127_5384635_19 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000000000000000000000002699 122.0
BYD3_k127_5384635_2 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000736 571.0
BYD3_k127_5384635_20 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000002393 102.0
BYD3_k127_5384635_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009143 571.0
BYD3_k127_5384635_4 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 523.0
BYD3_k127_5384635_5 Mur ligase family, glutamate ligase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007419 520.0
BYD3_k127_5384635_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 437.0
BYD3_k127_5384635_7 Peptidase family S51 K13282 - 3.4.15.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 406.0
BYD3_k127_5384635_8 Belongs to the peptidase S1C family K04691,K04771,K04772 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 389.0
BYD3_k127_5384635_9 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 360.0
BYD3_k127_5415411_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1358.0
BYD3_k127_5415411_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1133.0
BYD3_k127_5415411_10 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 436.0
BYD3_k127_5415411_11 AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 421.0
BYD3_k127_5415411_12 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 360.0
BYD3_k127_5415411_13 Rieske 2Fe-2S K00479 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 348.0
BYD3_k127_5415411_14 Histidine kinase K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 350.0
BYD3_k127_5415411_15 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 306.0
BYD3_k127_5415411_16 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 306.0
BYD3_k127_5415411_17 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 305.0
BYD3_k127_5415411_18 Type II secretion system K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 287.0
BYD3_k127_5415411_19 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006203 279.0
BYD3_k127_5415411_2 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 9.092e-310 982.0
BYD3_k127_5415411_20 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000001319 263.0
BYD3_k127_5415411_21 Protein of unknown function (DUF229) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000318 272.0
BYD3_k127_5415411_22 Membrane protein involved in D-alanine export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009007 250.0
BYD3_k127_5415411_23 ZIP Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000004577 239.0
BYD3_k127_5415411_24 Enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000007592 253.0
BYD3_k127_5415411_25 ADP-L-glycero-beta-D-manno-heptose biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000001579 233.0
BYD3_k127_5415411_26 Flavoprotein K01598 - 4.1.1.36 0.000000000000000000000000000000000000000000000000000000000000007185 220.0
BYD3_k127_5415411_27 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000002095 224.0
BYD3_k127_5415411_28 helix_turn_helix ASNC type K05800 - - 0.000000000000000000000000000000000000000000000000001701 186.0
BYD3_k127_5415411_29 Domain of unknown function (DUF2520) - - - 0.00000000000000000000000000000000000000000000000007298 186.0
BYD3_k127_5415411_3 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 4.737e-253 800.0
BYD3_k127_5415411_30 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000000000000000000000002512 164.0
BYD3_k127_5415411_31 gag-polyprotein putative aspartyl protease - - - 0.00000000000000000000000000000000000000005207 164.0
BYD3_k127_5415411_32 Pilin (bacterial filament) K02650,K02655 - - 0.00000000000000000000000000000000000004903 154.0
BYD3_k127_5415411_33 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000897 151.0
BYD3_k127_5415411_34 gag-polyprotein putative aspartyl protease - - - 0.0000000000000000000000000001657 133.0
BYD3_k127_5415411_35 DNA / pantothenate metabolism flavoprotein K21977 - 6.3.2.5 0.0000000000000000000000000002013 128.0
BYD3_k127_5415411_36 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000001776 120.0
BYD3_k127_5415411_37 Regulatory protein, FmdB family - - - 0.00000000000000000000000166 108.0
BYD3_k127_5415411_38 Modulates RecA activity K03565 - - 0.000000000000000000000002659 108.0
BYD3_k127_5415411_39 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005979,GO:0006109,GO:0006139,GO:0006417,GO:0006446,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010675,GO:0010677,GO:0010906,GO:0010962,GO:0016070,GO:0016071,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032881,GO:0032885,GO:0034248,GO:0034249,GO:0034641,GO:0043170,GO:0043255,GO:0043467,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045719,GO:0045912,GO:0045947,GO:0046483,GO:0048027,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0062012,GO:0065007,GO:0070873,GO:0070874,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:2000112,GO:2000113 - 0.0000000000000000000002517 99.0
BYD3_k127_5415411_4 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 7.974e-223 705.0
BYD3_k127_5415411_40 - - - - 0.0000000000002068 84.0
BYD3_k127_5415411_41 Recombinase zinc beta ribbon domain - - - 0.00001815 49.0
BYD3_k127_5415411_5 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004671 601.0
BYD3_k127_5415411_6 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 538.0
BYD3_k127_5415411_7 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 509.0
BYD3_k127_5415411_8 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 496.0
BYD3_k127_5415411_9 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004011 452.0
BYD3_k127_5532356_0 Formate dehydrogenase alpha subunit K00123 - 1.17.1.9 0.0 1419.0
BYD3_k127_5532356_1 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 3.171e-235 754.0
BYD3_k127_5532356_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006259 293.0
BYD3_k127_5532356_11 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002146 274.0
BYD3_k127_5532356_12 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000005578 229.0
BYD3_k127_5532356_13 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00127 - - 0.00000000000000000000000000000000000000000000000004759 196.0
BYD3_k127_5532356_14 Repressor involved in choline regulation of the bet genes K02167 - - 0.000000000000000000000000000000000000000006156 179.0
BYD3_k127_5532356_16 NADH-dependant formate dehydrogenase delta subunit FdsD K00126 - 1.17.1.9 0.00000000000002372 74.0
BYD3_k127_5532356_2 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00124 - - 1.5e-224 706.0
BYD3_k127_5532356_3 belongs to the aldehyde dehydrogenase family K09472,K12254 - 1.2.1.54,1.2.1.99 8.203e-219 691.0
BYD3_k127_5532356_4 trimethylamine methyltransferase K14083 - 2.1.1.250 1.533e-208 661.0
BYD3_k127_5532356_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 3.449e-203 640.0
BYD3_k127_5532356_6 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00499,K16319 - 1.14.12.1,1.14.15.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 510.0
BYD3_k127_5532356_7 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 426.0
BYD3_k127_5532356_8 GIY-YIG type nucleases (URI domain) K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 400.0
BYD3_k127_5532356_9 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 364.0
BYD3_k127_5560093_0 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 0.0 1007.0
BYD3_k127_5560093_1 COG1233 Phytoene dehydrogenase and related proteins - - - 1.536e-260 811.0
BYD3_k127_5560093_10 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 612.0
BYD3_k127_5560093_11 Protein of unknown function (DUF1585) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005638 604.0
BYD3_k127_5560093_12 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003376 610.0
BYD3_k127_5560093_13 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004597 599.0
BYD3_k127_5560093_14 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000649 603.0
BYD3_k127_5560093_15 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006541 589.0
BYD3_k127_5560093_16 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 582.0
BYD3_k127_5560093_17 Glutamate-1-semialdehyde aminotransferase K01845 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016853,GO:0016866,GO:0016869,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042286,GO:0042440,GO:0042802,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008553 541.0
BYD3_k127_5560093_18 PFAM amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006053 531.0
BYD3_k127_5560093_19 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 507.0
BYD3_k127_5560093_2 COG0457 FOG TPR repeat - - - 2.897e-243 772.0
BYD3_k127_5560093_20 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 490.0
BYD3_k127_5560093_21 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 484.0
BYD3_k127_5560093_22 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008995 457.0
BYD3_k127_5560093_23 COG1233 Phytoene dehydrogenase and related proteins K10027,K10210 - 1.14.99.44,1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 456.0
BYD3_k127_5560093_24 Protein conserved in bacteria K11891,K11902,K11910 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 413.0
BYD3_k127_5560093_25 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586,K12526 - 2.7.2.4,4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 387.0
BYD3_k127_5560093_26 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004389 390.0
BYD3_k127_5560093_27 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00479,K05549,K05708,K14748,K16319 - 1.14.12.1,1.14.12.10,1.14.12.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006658 381.0
BYD3_k127_5560093_28 Putrescine transport system permease K11075 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 375.0
BYD3_k127_5560093_29 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009339 363.0
BYD3_k127_5560093_3 COG0457 FOG TPR repeat - - - 2.583e-224 708.0
BYD3_k127_5560093_30 Peptidase dimerisation domain K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 351.0
BYD3_k127_5560093_31 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 342.0
BYD3_k127_5560093_32 ABC-type spermidine putrescine transport system, permease component II K11074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 325.0
BYD3_k127_5560093_33 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007936 314.0
BYD3_k127_5560093_34 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 305.0
BYD3_k127_5560093_35 COG0687 Spermidine putrescine-binding periplasmic protein K11073 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009784 300.0
BYD3_k127_5560093_36 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000141 265.0
BYD3_k127_5560093_37 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000001441 268.0
BYD3_k127_5560093_38 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000009688 257.0
BYD3_k127_5560093_39 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000002095 236.0
BYD3_k127_5560093_4 Amidohydrolase K07045 - - 5.889e-219 692.0
BYD3_k127_5560093_40 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000000003128 210.0
BYD3_k127_5560093_41 BetI-type transcriptional repressor, C-terminal - - - 0.00000000000000000000000000000000000000000000000000001167 196.0
BYD3_k127_5560093_42 SCO1/SenC K07152 - - 0.00000000000000000000000000000000000000000000006669 175.0
BYD3_k127_5560093_43 PFAM CAAX amino terminal protease family K07052 - - 0.000000000000000000000000000000000000000442 170.0
BYD3_k127_5560093_44 peptidase S16, lon K07157 - - 0.0000000000000000000000000000000000000005091 169.0
BYD3_k127_5560093_45 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000006388 152.0
BYD3_k127_5560093_46 COG1309 Transcriptional regulator K02167 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006950,GO:0006970,GO:0008150,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000002448 157.0
BYD3_k127_5560093_47 transglycosylase associated protein - - - 0.0000000000000000000000000000006979 124.0
BYD3_k127_5560093_48 lactoylglutathione lyase activity - - - 0.0000000000000000000038 108.0
BYD3_k127_5560093_49 COG3000 Sterol desaturase - - - 0.0000000000001088 74.0
BYD3_k127_5560093_5 belongs to the aldehyde dehydrogenase family K09472 - 1.2.1.99 8.629e-215 677.0
BYD3_k127_5560093_51 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000001764 77.0
BYD3_k127_5560093_52 Cytochrome C' - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000009041 74.0
BYD3_k127_5560093_53 - - - - 0.000001035 61.0
BYD3_k127_5560093_54 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.00002157 58.0
BYD3_k127_5560093_55 Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - 0.0001554 54.0
BYD3_k127_5560093_6 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 6.316e-206 649.0
BYD3_k127_5560093_7 Bacterial protein of unknown function (DUF885) - - - 1.859e-204 652.0
BYD3_k127_5560093_8 COG1042 Acyl-CoA synthetase (NDP forming) - - - 1.37e-197 638.0
BYD3_k127_5560093_9 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 1.684e-196 623.0
BYD3_k127_5786106_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1428.0
BYD3_k127_5786106_1 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K01847 - 5.4.99.2 1.337e-310 1003.0
BYD3_k127_5786106_10 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 546.0
BYD3_k127_5786106_11 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 480.0
BYD3_k127_5786106_12 peptidase, M16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 395.0
BYD3_k127_5786106_13 Reduces the stability of FtsZ polymers in the presence of ATP K06916 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032153,GO:0044424,GO:0044464,GO:0051301 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 362.0
BYD3_k127_5786106_14 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 311.0
BYD3_k127_5786106_15 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 296.0
BYD3_k127_5786106_16 Enoyl-CoA hydratase carnithine racemase K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000002292 235.0
BYD3_k127_5786106_17 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000002522 203.0
BYD3_k127_5786106_18 Regulatory protein GntR HTH - - - 0.00000000000000000000000000000000125 143.0
BYD3_k127_5786106_19 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 - - 0.00000000000001093 80.0
BYD3_k127_5786106_2 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 6.573e-275 858.0
BYD3_k127_5786106_3 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 2.929e-258 812.0
BYD3_k127_5786106_4 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 3.505e-226 723.0
BYD3_k127_5786106_5 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 2.244e-213 690.0
BYD3_k127_5786106_6 COG4770 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 602.0
BYD3_k127_5786106_7 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009098 567.0
BYD3_k127_5786106_8 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 537.0
BYD3_k127_5786106_9 Acyl-CoA dehydrogenase, middle domain K00253 - 1.3.8.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006527 554.0
BYD3_k127_5894054_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 7.688e-237 752.0
BYD3_k127_5894054_1 Pro-apoptotic serine protease nma111. Source PGD - - - 2.941e-236 766.0
BYD3_k127_5894054_10 Belongs to the SUA5 family K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 324.0
BYD3_k127_5894054_11 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K18800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 322.0
BYD3_k127_5894054_12 TIGRFAM type I secretion outer membrane protein, TolC K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009945 312.0
BYD3_k127_5894054_13 EVE domain - - - 0.000000000000000000000000000000000000000000000000000000001556 207.0
BYD3_k127_5894054_14 PFAM protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000004337 205.0
BYD3_k127_5894054_15 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000002608 176.0
BYD3_k127_5894054_16 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000006495 151.0
BYD3_k127_5894054_17 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.000000000000000000000000000000009904 136.0
BYD3_k127_5894054_18 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000000000000000001592 126.0
BYD3_k127_5894054_19 Belongs to the UPF0149 family K09895 - - 0.0000000000000000000005413 106.0
BYD3_k127_5894054_2 Sugar (and other) transporter - - - 9e-209 663.0
BYD3_k127_5894054_20 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000000002276 97.0
BYD3_k127_5894054_3 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 602.0
BYD3_k127_5894054_4 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 599.0
BYD3_k127_5894054_5 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 572.0
BYD3_k127_5894054_6 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 479.0
BYD3_k127_5894054_7 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 443.0
BYD3_k127_5894054_8 pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008692 430.0
BYD3_k127_5894054_9 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 342.0
BYD3_k127_6088925_0 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007501 441.0
BYD3_k127_6088925_1 Conserved hypothetical protein 698 - - - 0.00000000000000000000000000000000000000000118 169.0
BYD3_k127_6088925_2 - - - - 0.0000000000000785 78.0
BYD3_k127_6088925_3 Angiotensin-converting enzyme K01283 - 3.4.15.1 0.000006003 59.0
BYD3_k127_6357690_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 7.61e-321 1028.0
BYD3_k127_6357690_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 6.307e-294 918.0
BYD3_k127_6357690_10 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000000000000000001109 275.0
BYD3_k127_6357690_11 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000251 260.0
BYD3_k127_6357690_12 Protein of unknown function (DUF3501) - - - 0.00000000000000000000000000000000000000000000000000000000000003709 222.0
BYD3_k127_6357690_13 GAF domain K08968 - 1.8.4.14 0.00000000000000000000000000000000000000000000000008679 188.0
BYD3_k127_6357690_14 PFAM electron transport protein SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000009333 157.0
BYD3_k127_6357690_15 TIGRFAM FimV C-terminal domain K08086 - - 0.000000000000000000000000000006686 127.0
BYD3_k127_6357690_16 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 0.0000000000000000002608 91.0
BYD3_k127_6357690_2 Cysteine-rich domain - - - 1.613e-195 618.0
BYD3_k127_6357690_3 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008445 576.0
BYD3_k127_6357690_4 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 497.0
BYD3_k127_6357690_5 cyclic-guanylate-specific phosphodiesterase activity K21025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 338.0
BYD3_k127_6357690_6 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 305.0
BYD3_k127_6357690_7 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 302.0
BYD3_k127_6357690_8 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 289.0
BYD3_k127_6357690_9 Elongation factor P--(R)-beta-lysine ligase K04568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001656 291.0
BYD3_k127_6579133_0 aldehyde oxidase - - - 0.0 1215.0
BYD3_k127_6579133_1 peptidase S9 - - - 6.877e-278 869.0
BYD3_k127_6579133_10 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004276 285.0
BYD3_k127_6579133_11 Pfam:Pyridox_oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009769 274.0
BYD3_k127_6579133_12 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002861 273.0
BYD3_k127_6579133_13 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001127 285.0
BYD3_k127_6579133_14 Protein of unknown function (DUF541) K09797 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001106 269.0
BYD3_k127_6579133_15 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000003549 263.0
BYD3_k127_6579133_16 2Fe-2S -binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001325 248.0
BYD3_k127_6579133_17 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004506 239.0
BYD3_k127_6579133_18 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000000000002556 234.0
BYD3_k127_6579133_19 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000003647 226.0
BYD3_k127_6579133_2 Formiminotransferase-cyclodeaminase K00603,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008258 554.0
BYD3_k127_6579133_20 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000249 229.0
BYD3_k127_6579133_21 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000003416 227.0
BYD3_k127_6579133_22 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000001727 216.0
BYD3_k127_6579133_23 Tryptophan-rich sensory protein K05770 - - 0.00000000000000000000000000000000000000000000000000000000000006291 217.0
BYD3_k127_6579133_24 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000000007372 212.0
BYD3_k127_6579133_25 dioxygenase of extradiol dioxygenase family K06991 - - 0.00000000000000000000000000000000000000000000000000000000007343 215.0
BYD3_k127_6579133_26 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000001157 210.0
BYD3_k127_6579133_27 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000006447 207.0
BYD3_k127_6579133_28 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000001003 207.0
BYD3_k127_6579133_29 Endoribonuclease L-PSP K10013 - - 0.00000000000000000000000000000000000000000000000000003144 192.0
BYD3_k127_6579133_3 Domain of unknown function DUF21 K03699 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 417.0
BYD3_k127_6579133_30 Sugar (and other) transporter K07552 - - 0.000000000000000000000000000000000000000000000000003332 199.0
BYD3_k127_6579133_31 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000000001334 182.0
BYD3_k127_6579133_32 OsmC-like protein K04063 - - 0.0000000000000000000000000000000000000000000000001625 201.0
BYD3_k127_6579133_33 Uracil DNA glycosylase superfamily - - - 0.0000000000000000000000000000000000000000000000002803 182.0
BYD3_k127_6579133_34 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000000000000000000000000000000000000000006937 173.0
BYD3_k127_6579133_35 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000312 165.0
BYD3_k127_6579133_36 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000005832 168.0
BYD3_k127_6579133_37 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000009794 165.0
BYD3_k127_6579133_38 Nucleotide pyrophosphohydrolase - - - 0.000000000000000000000000000000000000000283 153.0
BYD3_k127_6579133_39 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000000000000000283 153.0
BYD3_k127_6579133_4 PFAM Peptidase family M20 M25 M40 K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 403.0
BYD3_k127_6579133_40 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000001805 144.0
BYD3_k127_6579133_41 Protein of unknown function (DUF3303) - - - 0.0000000000000000000000000000000006824 132.0
BYD3_k127_6579133_42 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000102 142.0
BYD3_k127_6579133_43 light absorption K06893 - - 0.000000000000000000000000007213 114.0
BYD3_k127_6579133_44 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000000000000001392 102.0
BYD3_k127_6579133_46 lipoprotein NlpE involved in copper resistance - - - 0.00000000000000000000631 107.0
BYD3_k127_6579133_47 PFAM Integral membrane protein TerC K05794 - - 0.00000000000000000004326 93.0
BYD3_k127_6579133_48 Cytochrome C' - - - 0.00000000000000001649 88.0
BYD3_k127_6579133_49 - - - - 0.00000000000000007492 91.0
BYD3_k127_6579133_5 Chromate transporter K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 340.0
BYD3_k127_6579133_50 SnoaL-like polyketide cyclase - - - 0.0000000000009053 74.0
BYD3_k127_6579133_51 alpha/beta hydrolase fold - - - 0.000000000001244 76.0
BYD3_k127_6579133_52 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000146 70.0
BYD3_k127_6579133_54 Domain of unknown function (DUF4431) - - - 0.00000004913 61.0
BYD3_k127_6579133_56 Helix-turn-helix K21498 - - 0.000009069 47.0
BYD3_k127_6579133_57 - - - - 0.0000237 54.0
BYD3_k127_6579133_6 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 323.0
BYD3_k127_6579133_7 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009371 314.0
BYD3_k127_6579133_8 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 297.0
BYD3_k127_6579133_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003034 286.0
BYD3_k127_665907_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K07303 - 1.3.99.16 0.0 1053.0
BYD3_k127_665907_1 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 525.0
BYD3_k127_665907_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 442.0
BYD3_k127_665907_3 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000001024 250.0
BYD3_k127_665907_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000007368 240.0
BYD3_k127_665907_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000002144 151.0
BYD3_k127_665907_6 E-Z type HEAT repeats - - - 0.000000000000000000000000000000001338 144.0
BYD3_k127_665907_7 - - - - 0.0000000000000000000000000000267 138.0
BYD3_k127_665907_8 pyrroloquinoline quinone binding - - - 0.0000000000000000000003298 100.0
BYD3_k127_665907_9 protein secretion - - - 0.00001486 57.0
BYD3_k127_6838244_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 514.0
BYD3_k127_6838244_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009671 278.0
BYD3_k127_6838244_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000008937 230.0
BYD3_k127_6838244_3 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000057 169.0
BYD3_k127_6838244_4 Metallo-peptidase family M12B Reprolysin-like - - - 0.000000000001838 78.0
BYD3_k127_6976747_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1180.0
BYD3_k127_6976747_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.246e-282 878.0
BYD3_k127_6976747_10 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 322.0
BYD3_k127_6976747_11 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009206 322.0
BYD3_k127_6976747_12 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 303.0
BYD3_k127_6976747_13 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 306.0
BYD3_k127_6976747_14 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 308.0
BYD3_k127_6976747_15 L,D-transpeptidase catalytic domain K16291 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 310.0
BYD3_k127_6976747_16 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000003375 264.0
BYD3_k127_6976747_17 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001083 270.0
BYD3_k127_6976747_18 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000005744 255.0
BYD3_k127_6976747_19 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000008817 238.0
BYD3_k127_6976747_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 2.229e-212 685.0
BYD3_k127_6976747_20 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000005975 235.0
BYD3_k127_6976747_21 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000458 241.0
BYD3_k127_6976747_22 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000003399 202.0
BYD3_k127_6976747_23 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000001827 190.0
BYD3_k127_6976747_24 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000001221 169.0
BYD3_k127_6976747_25 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000000000794 117.0
BYD3_k127_6976747_26 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000005079 96.0
BYD3_k127_6976747_27 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 GO:0003674,GO:0003824,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008897,GO:0009058,GO:0016740,GO:0016772,GO:0016780,GO:0044238,GO:0071704,GO:1901576 2.7.8.7 0.000000000000000000002829 106.0
BYD3_k127_6976747_28 Belongs to the UPF0434 family K09791 - - 0.000000000000000002757 88.0
BYD3_k127_6976747_29 - - - - 0.0000000000000006805 82.0
BYD3_k127_6976747_3 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 593.0
BYD3_k127_6976747_30 Uncharacterized ACR, COG1399 K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000421 86.0
BYD3_k127_6976747_31 - - - - 0.00000002824 62.0
BYD3_k127_6976747_32 general stress protein - - - 0.0000004286 57.0
BYD3_k127_6976747_33 Alanine-zipper, major outer membrane lipoprotein - - - 0.000004772 53.0
BYD3_k127_6976747_34 Domain of unknown function (DUF4845) - - - 0.00005907 53.0
BYD3_k127_6976747_4 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 464.0
BYD3_k127_6976747_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 445.0
BYD3_k127_6976747_6 aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006773 440.0
BYD3_k127_6976747_7 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 415.0
BYD3_k127_6976747_8 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005371 375.0
BYD3_k127_6976747_9 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 360.0
BYD3_k127_7021573_0 Di-haem cytochrome c peroxidase K00428 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.11.1.5 0.0 1132.0
BYD3_k127_7021573_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008986,GO:0009058,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019318,GO:0019319,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0071704,GO:1901576 2.7.9.2 0.0 1099.0
BYD3_k127_7021573_10 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 488.0
BYD3_k127_7021573_11 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 483.0
BYD3_k127_7021573_12 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 442.0
BYD3_k127_7021573_13 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 432.0
BYD3_k127_7021573_14 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 434.0
BYD3_k127_7021573_15 Peptidase M48 K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 392.0
BYD3_k127_7021573_16 Phage integrase, N-terminal SAM-like domain K04763 GO:0000150,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009314,GO:0009628,GO:0009987,GO:0015074,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0071139,GO:0071704,GO:0090304,GO:0140097,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 396.0
BYD3_k127_7021573_17 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0050896,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 375.0
BYD3_k127_7021573_18 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 379.0
BYD3_k127_7021573_19 Aminotransferase class-V K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 357.0
BYD3_k127_7021573_2 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 7.732e-251 782.0
BYD3_k127_7021573_20 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 325.0
BYD3_k127_7021573_21 glutathione transferase activity K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006891 299.0
BYD3_k127_7021573_22 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000063 294.0
BYD3_k127_7021573_23 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001132 291.0
BYD3_k127_7021573_24 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000115 276.0
BYD3_k127_7021573_25 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003583 265.0
BYD3_k127_7021573_26 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000003508 228.0
BYD3_k127_7021573_27 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.00000000000000000000000000000000000000000000000000000000000000002251 248.0
BYD3_k127_7021573_28 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K15396 - 2.1.1.200 0.000000000000000000000000000000000000000000000000000000000001083 217.0
BYD3_k127_7021573_29 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000002568 225.0
BYD3_k127_7021573_3 amino acid K03294 - - 3.613e-224 704.0
BYD3_k127_7021573_30 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000000002017 212.0
BYD3_k127_7021573_31 Nudix hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000003993 208.0
BYD3_k127_7021573_32 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) - - - 0.0000000000000000000000000000000000000000000000000000003719 196.0
BYD3_k127_7021573_33 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000004959 192.0
BYD3_k127_7021573_34 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K01647,K22491 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000001228 201.0
BYD3_k127_7021573_35 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.00000000000000000000000000000000000000000000000004613 184.0
BYD3_k127_7021573_36 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000008579 186.0
BYD3_k127_7021573_37 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000002241 169.0
BYD3_k127_7021573_38 Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of 2Fe2S cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system K05997,K13628 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0016530,GO:0019538,GO:0022607,GO:0031163,GO:0034986,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:0097428,GO:0140104,GO:1901564 - 0.0000000000000000000000000000000000000002893 154.0
BYD3_k127_7021573_39 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.000000000000000000000000000000000000003298 160.0
BYD3_k127_7021573_4 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 4.208e-212 670.0
BYD3_k127_7021573_40 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000000000000000000008003 142.0
BYD3_k127_7021573_41 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000336 136.0
BYD3_k127_7021573_42 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000001052 132.0
BYD3_k127_7021573_43 SCO1/SenC K07152 - - 0.0000000000000000000000000001454 123.0
BYD3_k127_7021573_44 PDZ domain - - - 0.0000000000000000000000006768 120.0
BYD3_k127_7021573_45 protein conserved in bacteria - - - 0.00000000000000000000007223 108.0
BYD3_k127_7021573_46 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000001318 71.0
BYD3_k127_7021573_47 Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis K15539 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.0000000001432 73.0
BYD3_k127_7021573_49 - - - - 0.0000003485 62.0
BYD3_k127_7021573_5 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 1.037e-208 655.0
BYD3_k127_7021573_6 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 554.0
BYD3_k127_7021573_7 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008554 543.0
BYD3_k127_7021573_8 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 548.0
BYD3_k127_7021573_9 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 520.0
BYD3_k127_7206891_0 Nitrite reductase K15864 - 1.7.2.1,1.7.99.1 4.579e-318 987.0
BYD3_k127_7206891_1 Formate--tetrahydrofolate ligase K01938 - 6.3.4.3 1.792e-276 861.0
BYD3_k127_7206891_10 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000764 520.0
BYD3_k127_7206891_11 COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 522.0
BYD3_k127_7206891_12 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 525.0
BYD3_k127_7206891_13 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008519 500.0
BYD3_k127_7206891_14 Homospermidine synthase K00808 - 2.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 501.0
BYD3_k127_7206891_15 Involved in arsenical resistance. Thought to form the channel of an arsenite pump - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000548 485.0
BYD3_k127_7206891_16 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004431 483.0
BYD3_k127_7206891_17 oxidoreductase K09471 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0044424,GO:0044464,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 466.0
BYD3_k127_7206891_18 TonB-dependent heme hemoglobin receptor K16087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 474.0
BYD3_k127_7206891_19 glutamine synthetase K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 449.0
BYD3_k127_7206891_2 Prolyl oligopeptidase family - - - 7.737e-234 743.0
BYD3_k127_7206891_20 Aminotransferase K14287 - 2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006503 441.0
BYD3_k127_7206891_21 Binding-protein-dependent transport system inner membrane component K11071,K11075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 409.0
BYD3_k127_7206891_22 Required for the activity of the bacterial periplasmic transport system of putrescine K11069,K11073 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 422.0
BYD3_k127_7206891_23 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K09699 - 2.3.1.168 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 403.0
BYD3_k127_7206891_24 PFAM bifunctional deaminase-reductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 386.0
BYD3_k127_7206891_25 Binding-protein-dependent transport system inner membrane component K11070,K11074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 382.0
BYD3_k127_7206891_26 PFAM Cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 364.0
BYD3_k127_7206891_27 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 355.0
BYD3_k127_7206891_28 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 351.0
BYD3_k127_7206891_29 Alpha beta hydrolase K00433 - 1.11.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007082 323.0
BYD3_k127_7206891_3 Amidohydrolase family K06015 - 3.5.1.81 3.967e-221 699.0
BYD3_k127_7206891_30 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 330.0
BYD3_k127_7206891_31 Gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 292.0
BYD3_k127_7206891_32 PFAM Cys Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000045 289.0
BYD3_k127_7206891_33 Bacterial protein of unknown function (DUF924) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005193 266.0
BYD3_k127_7206891_34 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009449 245.0
BYD3_k127_7206891_35 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000009121 240.0
BYD3_k127_7206891_36 PFAM Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002464 244.0
BYD3_k127_7206891_38 serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000601 228.0
BYD3_k127_7206891_39 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000002624 206.0
BYD3_k127_7206891_4 Isocitrate dehydrogenase - - - 9.164e-220 687.0
BYD3_k127_7206891_40 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000001585 200.0
BYD3_k127_7206891_41 PFAM thioesterase superfamily protein - - - 0.000000000000000000000000000000000000000000000002418 177.0
BYD3_k127_7206891_42 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000389 182.0
BYD3_k127_7206891_43 MAPEG family - - - 0.0000000000000000000000000000000000000000000001401 171.0
BYD3_k127_7206891_44 NIPSNAP - - - 0.000000000000000000000000000000000000000000000173 172.0
BYD3_k127_7206891_45 helix_turn_helix ASNC type K05800 - - 0.0000000000000000000000000000000000000000000008395 173.0
BYD3_k127_7206891_46 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000000001438 168.0
BYD3_k127_7206891_47 Domain of unknown function (DUF4399) - - - 0.00000000000000000000000000000000000000000002391 165.0
BYD3_k127_7206891_48 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000006726 162.0
BYD3_k127_7206891_49 - - - - 0.00000000000000000000000000000009488 128.0
BYD3_k127_7206891_5 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 7.466e-219 711.0
BYD3_k127_7206891_50 - - - - 0.000000000000000000000000000008599 122.0
BYD3_k127_7206891_51 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000004656 118.0
BYD3_k127_7206891_52 Domain of unknown function (DU1801) - - - 0.000000000000000000000000001051 115.0
BYD3_k127_7206891_53 Putative inner membrane exporter, YdcZ K09936 - - 0.000000000000000000000000008504 114.0
BYD3_k127_7206891_54 Domain of unknown function (DUF4440) - - - 0.000000000000000000000005872 106.0
BYD3_k127_7206891_55 Domain of unknown function (DUF4440) - - - 0.0000000000000000007736 92.0
BYD3_k127_7206891_56 sequence-specific DNA binding K07729 - - 0.000000000002317 70.0
BYD3_k127_7206891_57 Addiction module toxin, RelE StbE family K07334 - - 0.00000000000261 68.0
BYD3_k127_7206891_58 determination of stomach left/right asymmetry K19360 - - 0.000000005491 63.0
BYD3_k127_7206891_59 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000001793 58.0
BYD3_k127_7206891_6 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256 - 2.6.1.113 1.351e-201 636.0
BYD3_k127_7206891_60 Helix-turn-helix domain - - - 0.00000002055 60.0
BYD3_k127_7206891_62 - - - - 0.0008692 46.0
BYD3_k127_7206891_7 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 1.085e-200 633.0
BYD3_k127_7206891_8 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00167 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 521.0
BYD3_k127_7206891_9 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004721,GO:0005488,GO:0005524,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008772,GO:0009987,GO:0016208,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0017076,GO:0018105,GO:0018193,GO:0018209,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050790,GO:0065007,GO:0065009,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 538.0
BYD3_k127_7258587_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1560.0
BYD3_k127_7258587_1 XFP C-terminal domain K01621 - 4.1.2.22,4.1.2.9 0.0 1265.0
BYD3_k127_7258587_10 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007894 366.0
BYD3_k127_7258587_11 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005034 376.0
BYD3_k127_7258587_12 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 GO:0003674,GO:0003824,GO:0004620,GO:0004630,GO:0005575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008081,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009987,GO:0016020,GO:0016298,GO:0016740,GO:0016772,GO:0016780,GO:0016787,GO:0016788,GO:0019637,GO:0030572,GO:0032048,GO:0032049,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008805 349.0
BYD3_k127_7258587_13 Methyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008694 349.0
BYD3_k127_7258587_14 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000506 336.0
BYD3_k127_7258587_15 ABC transporter K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 322.0
BYD3_k127_7258587_16 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009672 303.0
BYD3_k127_7258587_17 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 287.0
BYD3_k127_7258587_18 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007425 289.0
BYD3_k127_7258587_19 ATPases associated with a variety of cellular activities K05847 GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0031460,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0072337 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002482 299.0
BYD3_k127_7258587_2 Heavy metal translocating P-type atpase K17686 - 3.6.3.54 1.111e-314 985.0
BYD3_k127_7258587_20 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007328 288.0
BYD3_k127_7258587_21 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007723 282.0
BYD3_k127_7258587_22 glutathione s-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003345 272.0
BYD3_k127_7258587_23 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000123 267.0
BYD3_k127_7258587_24 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000003801 231.0
BYD3_k127_7258587_25 Sodium ABC transporter permease K09696 - - 0.000000000000000000000000000000000000000000000000000000000002933 232.0
BYD3_k127_7258587_26 Cation efflux family - - - 0.000000000000000000000000000000000000000000000000000001033 199.0
BYD3_k127_7258587_27 helix_turn_helix, mercury resistance K19591 - - 0.00000000000000000000000000000000000000000000002641 173.0
BYD3_k127_7258587_28 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000000000000000001016 163.0
BYD3_k127_7258587_29 - - - - 0.000000000000000000000000000000000000000001112 162.0
BYD3_k127_7258587_3 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 3.816e-239 752.0
BYD3_k127_7258587_30 Sigma-70 region 2 - - - 0.00000000000000000000000000001618 124.0
BYD3_k127_7258587_33 SnoaL-like domain - - - 0.0000000005485 66.0
BYD3_k127_7258587_34 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286 - - 0.00000245 56.0
BYD3_k127_7258587_4 Carbohydrate phosphorylase - - - 6.455e-229 721.0
BYD3_k127_7258587_5 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 572.0
BYD3_k127_7258587_6 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 541.0
BYD3_k127_7258587_7 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 484.0
BYD3_k127_7258587_8 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009772 471.0
BYD3_k127_7258587_9 TAP-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 382.0
BYD3_k127_7384883_0 AcrB/AcrD/AcrF family - - - 0.0 1055.0
BYD3_k127_7384883_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 2.087e-315 975.0
BYD3_k127_7384883_10 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 329.0
BYD3_k127_7384883_11 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 318.0
BYD3_k127_7384883_12 cytochrome oxidase assembly K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 326.0
BYD3_k127_7384883_13 Alginate export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 303.0
BYD3_k127_7384883_14 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006668 281.0
BYD3_k127_7384883_15 permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006389 267.0
BYD3_k127_7384883_16 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000002621 227.0
BYD3_k127_7384883_17 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000004406 222.0
BYD3_k127_7384883_18 Psort location Cytoplasmic, score 9.97 K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000001181 196.0
BYD3_k127_7384883_19 Histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000000000000000000000002121 179.0
BYD3_k127_7384883_2 PFAM UvrD REP helicase K03657 - 3.6.4.12 2.89e-266 839.0
BYD3_k127_7384883_20 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000000001022 181.0
BYD3_k127_7384883_21 acetyltransferase K22441 - 2.3.1.57 0.000000000000000000000000000000000000000000003316 169.0
BYD3_k127_7384883_22 SURF1-like protein K14998 - - 0.00000000000000000000000000000000000000001248 167.0
BYD3_k127_7384883_23 oxidase, assembly K02258 - - 0.00000000000000000000000000000000000000001786 162.0
BYD3_k127_7384883_24 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000002096 175.0
BYD3_k127_7384883_25 Serine threonine protein kinase - - - 0.0000000000000000000000000000000003059 151.0
BYD3_k127_7384883_26 Tetratricopeptide repeat - - - 0.00000000000000000000004695 102.0
BYD3_k127_7384883_27 signal sequence binding - - - 0.00000000000000000001667 105.0
BYD3_k127_7384883_28 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000008229 68.0
BYD3_k127_7384883_29 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000001445 65.0
BYD3_k127_7384883_3 PFAM TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003845 542.0
BYD3_k127_7384883_31 calcium- and calmodulin-responsive adenylate cyclase activity K01179,K01406,K07004 - 3.2.1.4,3.4.24.40 0.0001859 54.0
BYD3_k127_7384883_4 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006297 552.0
BYD3_k127_7384883_5 Heme copper-type cytochrome quinol oxidase subunit 3 K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005195 389.0
BYD3_k127_7384883_6 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 367.0
BYD3_k127_7384883_7 COG3104 Dipeptide tripeptide permease K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 374.0
BYD3_k127_7384883_8 Zinc-binding dehydrogenase K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007849 365.0
BYD3_k127_7384883_9 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006518 350.0
BYD3_k127_7521655_0 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 514.0
BYD3_k127_7521655_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 462.0
BYD3_k127_7521655_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 339.0
BYD3_k127_7521655_3 Predicted membrane protein (DUF2306) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000324 239.0
BYD3_k127_7521655_4 HlyD family secretion protein - - - 0.00000000000000000000000000000000000000000000000000003902 198.0
BYD3_k127_7521655_5 Domain of unknown function (DUF4386) - - - 0.000000000000000000000000000000000005017 145.0
BYD3_k127_7521655_6 - - - - 0.0000000000000166 78.0
BYD3_k127_7550982_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1152.0
BYD3_k127_7550982_1 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 2.214e-315 973.0
BYD3_k127_7550982_10 Extradiol ring-cleavage dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005439 348.0
BYD3_k127_7550982_11 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 330.0
BYD3_k127_7550982_12 POTRA domain TamA domain 1 K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 333.0
BYD3_k127_7550982_13 Efflux pump membrane transporter K19585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 303.0
BYD3_k127_7550982_14 ornithine cyclodeaminase activity K01750,K18258,K19244 - 1.4.1.1,1.5.1.25,4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000726 308.0
BYD3_k127_7550982_15 hydrolase K16165 - 3.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001264 282.0
BYD3_k127_7550982_16 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001376 268.0
BYD3_k127_7550982_17 PFAM Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000002661 259.0
BYD3_k127_7550982_18 NADH pyrophosphatase zinc ribbon domain K03426 - 3.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000002487 257.0
BYD3_k127_7550982_19 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005156 253.0
BYD3_k127_7550982_2 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 4.401e-252 785.0
BYD3_k127_7550982_20 maleylacetoacetate isomerase K01801 - 5.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000003271 252.0
BYD3_k127_7550982_21 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000001852 218.0
BYD3_k127_7550982_22 - - - - 0.0000000000000000000000000000000000000000000000000000004288 198.0
BYD3_k127_7550982_23 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000002059 201.0
BYD3_k127_7550982_24 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000007396 203.0
BYD3_k127_7550982_25 COG2863 Cytochrome c553 - - - 0.00000000000000000000000000000000000000000000000002718 189.0
BYD3_k127_7550982_26 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000008807 186.0
BYD3_k127_7550982_27 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000008009 180.0
BYD3_k127_7550982_28 protein possibly involved in aromatic compounds catabolism K19222 - 3.1.2.28 0.00000000000000000000000000000000000000000000001925 174.0
BYD3_k127_7550982_29 - - - - 0.00000000000000000000000000000000000000000000006062 177.0
BYD3_k127_7550982_3 COG1622 Heme copper-type cytochrome quinol oxidases, subunit 2 K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 583.0
BYD3_k127_7550982_30 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000001755 188.0
BYD3_k127_7550982_31 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000073 181.0
BYD3_k127_7550982_32 RES - - - 0.0000000000000000000000000000000000000001629 154.0
BYD3_k127_7550982_33 oxidase (Subunit iv) - - - 0.000000000000000000000000000000000002005 150.0
BYD3_k127_7550982_34 - - - - 0.00000000000000000000000000000000003265 142.0
BYD3_k127_7550982_35 DoxX family K15977 - - 0.0000000000000000000000000000000003343 135.0
BYD3_k127_7550982_36 Thiol disulfide interchange protein K03673 - - 0.000000000000000000000000000000004786 145.0
BYD3_k127_7550982_37 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000002142 138.0
BYD3_k127_7550982_38 Protein of unknown function (DUF2384) - - - 0.000000000000000000000000000003452 126.0
BYD3_k127_7550982_39 Protein of unknown function (DUF1272) - - - 0.000000000000000000002101 98.0
BYD3_k127_7550982_4 nitrite reductase [NAD(P)H] activity K00158,K00363,K03809,K05710 - 1.2.3.3,1.6.5.2,1.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005855 518.0
BYD3_k127_7550982_41 - - - - 0.000000000000002581 81.0
BYD3_k127_7550982_42 Transport permease protein K01992 - - 0.00000000000007797 73.0
BYD3_k127_7550982_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18298,K19586 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 461.0
BYD3_k127_7550982_6 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 434.0
BYD3_k127_7550982_7 tryptophan 2,3-dioxygenase activity K00453 - 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006671 389.0
BYD3_k127_7550982_8 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 390.0
BYD3_k127_7550982_9 PFAM cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 336.0
BYD3_k127_7593628_0 Catalyzes the conversion of salicylyl-CoA to gentisyl-CoA K00219,K09461 - 1.14.13.40,1.3.1.34 1.613e-308 962.0
BYD3_k127_7593628_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.479e-302 941.0
BYD3_k127_7593628_10 Exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 529.0
BYD3_k127_7593628_11 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 529.0
BYD3_k127_7593628_12 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 511.0
BYD3_k127_7593628_13 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 483.0
BYD3_k127_7593628_14 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 470.0
BYD3_k127_7593628_15 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 465.0
BYD3_k127_7593628_16 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 483.0
BYD3_k127_7593628_17 Belongs to the glycosyl hydrolase 57 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 455.0
BYD3_k127_7593628_18 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009978 426.0
BYD3_k127_7593628_19 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 390.0
BYD3_k127_7593628_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033554,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:1901576 2.4.1.18 2.003e-299 939.0
BYD3_k127_7593628_20 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 394.0
BYD3_k127_7593628_21 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 391.0
BYD3_k127_7593628_22 Transcriptional regulator K13633 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 372.0
BYD3_k127_7593628_23 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007751 379.0
BYD3_k127_7593628_24 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 342.0
BYD3_k127_7593628_25 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 313.0
BYD3_k127_7593628_26 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 340.0
BYD3_k127_7593628_27 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007796 302.0
BYD3_k127_7593628_28 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 298.0
BYD3_k127_7593628_29 Redoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007452 289.0
BYD3_k127_7593628_3 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 3.443e-253 791.0
BYD3_k127_7593628_30 Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 288.0
BYD3_k127_7593628_31 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001291 297.0
BYD3_k127_7593628_32 Esterase PHB depolymerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005727 267.0
BYD3_k127_7593628_33 PFAM cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001582 254.0
BYD3_k127_7593628_34 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002586 271.0
BYD3_k127_7593628_35 MOSC domain protein beta barrel domain protein K07140 - - 0.0000000000000000000000000000000000000000000000000000000000000004871 229.0
BYD3_k127_7593628_36 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000001306 236.0
BYD3_k127_7593628_37 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000000000001555 228.0
BYD3_k127_7593628_38 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000000000000000000000001794 222.0
BYD3_k127_7593628_39 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000001876 213.0
BYD3_k127_7593628_4 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 8.163e-222 700.0
BYD3_k127_7593628_40 COG2755 Lysophospholipase L1 and related esterases K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.0000000000000000000000000000000000000000000000000000008363 203.0
BYD3_k127_7593628_41 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K04756 - - 0.000000000000000000000000000000000000000000000000000002714 204.0
BYD3_k127_7593628_42 Sigma-70, region 4 - - - 0.00000000000000000000000000000000000000000000000000001236 194.0
BYD3_k127_7593628_43 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000000000000000000000000000000000002248 188.0
BYD3_k127_7593628_44 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000001047 186.0
BYD3_k127_7593628_45 signal sequence binding K07152 - - 0.0000000000000000000000000000000000000000000000007974 186.0
BYD3_k127_7593628_46 Mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000003975 182.0
BYD3_k127_7593628_47 Protein of unknown function (DUF3014) - - - 0.000000000000000000000000000000000000000000002177 176.0
BYD3_k127_7593628_48 proteolysis - - - 0.00000000000000000000000000000000000000000002942 178.0
BYD3_k127_7593628_49 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000001621 169.0
BYD3_k127_7593628_5 FtsX-like permease family K02004 - - 1.026e-211 703.0
BYD3_k127_7593628_50 AntiSigma factor - - - 0.0000000000000000000000000000000000000000002192 171.0
BYD3_k127_7593628_51 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000000000001771 171.0
BYD3_k127_7593628_52 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000001044 169.0
BYD3_k127_7593628_53 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000401 149.0
BYD3_k127_7593628_54 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000007386 159.0
BYD3_k127_7593628_55 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000003243 122.0
BYD3_k127_7593628_56 oxygen carrier activity K07216 - - 0.0000000000000000000000000001754 120.0
BYD3_k127_7593628_57 DNA-templated transcription, initiation K03088,K03091 - - 0.0000000000000000000000000001777 124.0
BYD3_k127_7593628_58 Predicted integral membrane protein (DUF2269) - - - 0.000000000000000000000000001205 118.0
BYD3_k127_7593628_59 universal stress protein K14055 GO:0000302,GO:0001539,GO:0006928,GO:0006950,GO:0006979,GO:0008150,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009636,GO:0009987,GO:0010035,GO:0033554,GO:0034599,GO:0034614,GO:0034644,GO:0035690,GO:0040011,GO:0042221,GO:0042493,GO:0042542,GO:0042710,GO:0044010,GO:0044764,GO:0046677,GO:0048870,GO:0050896,GO:0051179,GO:0051674,GO:0051704,GO:0051716,GO:0070301,GO:0070887,GO:0071214,GO:0071236,GO:0071478,GO:0071482,GO:0071973,GO:0097237,GO:0097588,GO:0104004,GO:1901700,GO:1901701 - 0.00000000000000000000000002802 121.0
BYD3_k127_7593628_6 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K08295 - 6.2.1.32 3.227e-203 644.0
BYD3_k127_7593628_60 - - - - 0.00000000000000000000000003542 113.0
BYD3_k127_7593628_61 Pathogenicity locus - - - 0.0000000000000000000001674 100.0
BYD3_k127_7593628_62 - - - - 0.0000000000001854 73.0
BYD3_k127_7593628_63 Bacterial protein of unknown function (DUF883) - - - 0.000000001795 67.0
BYD3_k127_7593628_64 FecR protein K07165 - - 0.00002776 57.0
BYD3_k127_7593628_65 SnoaL-like domain - - - 0.00005266 52.0
BYD3_k127_7593628_66 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0009721 46.0
BYD3_k127_7593628_7 Carbohydrate phosphorylase - - - 5.87e-202 655.0
BYD3_k127_7593628_8 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 606.0
BYD3_k127_7593628_9 gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 604.0
BYD3_k127_7814497_0 Sulfatase - - - 0.0 1226.0
BYD3_k127_7814497_1 Peptidase S46 - - - 2.577e-195 631.0
BYD3_k127_7814497_10 Exopolysaccharide synthesis, ExoD - - - 0.000000000000000000000000000000000002308 151.0
BYD3_k127_7814497_11 Belongs to the UPF0312 family - - - 0.0000000000000000000000000009245 127.0
BYD3_k127_7814497_12 Belongs to the UPF0312 family - - - 0.00002793 56.0
BYD3_k127_7814497_2 Acetyl-CoA hydrolase/transferase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006548 548.0
BYD3_k127_7814497_3 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004821 438.0
BYD3_k127_7814497_4 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 379.0
BYD3_k127_7814497_5 Fructosamine kinase - GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 298.0
BYD3_k127_7814497_6 Exodeoxyribonuclease IX - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008866 299.0
BYD3_k127_7814497_7 PFAM HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 287.0
BYD3_k127_7814497_8 Prokaryotic cytochrome b561 K12262 - - 0.00000000000000000000000000000000000000000004532 167.0
BYD3_k127_7814497_9 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000000000000000000000002266 151.0
BYD3_k127_7815803_0 Outer membrane receptor - - - 2.573e-275 884.0
BYD3_k127_7815803_1 X-Pro dipeptidyl-peptidase (S15 family) - - - 7.793e-249 784.0
BYD3_k127_7815803_10 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 364.0
BYD3_k127_7815803_11 Periplasmic solute binding protein K02077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008044 339.0
BYD3_k127_7815803_12 Amidinotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003191 289.0
BYD3_k127_7815803_13 ABC 3 transport family K02075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000312 284.0
BYD3_k127_7815803_14 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000007376 267.0
BYD3_k127_7815803_15 PFAM ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002839 253.0
BYD3_k127_7815803_16 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 GO:0000166,GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004077,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009305,GO:0009374,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0017053,GO:0017076,GO:0017144,GO:0018130,GO:0018271,GO:0019538,GO:0019752,GO:0019842,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033218,GO:0033293,GO:0034641,GO:0035639,GO:0036094,GO:0036211,GO:0042364,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1990837 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000001096 263.0
BYD3_k127_7815803_17 Domain of unknown function (DUF4880) K07165 - - 0.00000000000000000000000000000000000000000000000000000000000001401 229.0
BYD3_k127_7815803_18 Glycosyl transferase, family 2 K13693 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006011,GO:0006139,GO:0006725,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0009225,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0034641,GO:0040007,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046983,GO:0055086,GO:0071704,GO:1901135,GO:1901360 2.4.1.266 0.0000000000000000000000000000000000000000001162 168.0
BYD3_k127_7815803_19 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000004703 166.0
BYD3_k127_7815803_2 Belongs to the GMC oxidoreductase family - - - 1.635e-206 655.0
BYD3_k127_7815803_20 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000001841 141.0
BYD3_k127_7815803_21 glyoxalase III activity - - - 0.000000000000000000000000000000000993 142.0
BYD3_k127_7815803_22 - - - - 0.0000000000000000000000000000003397 129.0
BYD3_k127_7815803_23 PFAM Lipid A Biosynthesis N-terminal - - - 0.00000000000000000000000000007991 118.0
BYD3_k127_7815803_24 Domains in Na-Ca exchangers and integrin-beta4 - - - 0.0000000000000000000000002297 123.0
BYD3_k127_7815803_25 - - - - 0.000000000000000000006076 98.0
BYD3_k127_7815803_27 domain protein - - - 0.000000008244 66.0
BYD3_k127_7815803_28 - - - - 0.0000009973 51.0
BYD3_k127_7815803_3 Protein of unknown function (DUF1343) - - - 4.324e-206 652.0
BYD3_k127_7815803_4 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 573.0
BYD3_k127_7815803_5 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 537.0
BYD3_k127_7815803_6 phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 439.0
BYD3_k127_7815803_7 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 437.0
BYD3_k127_7815803_8 Lipocalin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009195 389.0
BYD3_k127_7815803_9 TonB-dependent receptor plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 389.0
BYD3_k127_7878771_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1233.0
BYD3_k127_7878771_1 Major Facilitator Superfamily - - - 5.876e-232 749.0
BYD3_k127_7878771_10 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007823 540.0
BYD3_k127_7878771_11 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 GO:0000270,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0006810,GO:0006869,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0010876,GO:0015647,GO:0015648,GO:0015835,GO:0015836,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0030203,GO:0031224,GO:0031226,GO:0033036,GO:0034203,GO:0034204,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0065007,GO:0065008,GO:0070589,GO:0071554,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097035,GO:1901135,GO:1901137,GO:1901264,GO:1901505,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 526.0
BYD3_k127_7878771_12 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily K01002 - 2.7.8.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 499.0
BYD3_k127_7878771_13 Belongs to the arginase family K01476,K01480,K12255,K18459 - 3.5.3.1,3.5.3.11,3.5.3.17,3.5.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 470.0
BYD3_k127_7878771_14 3-phytase K01083 - 3.1.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004043 484.0
BYD3_k127_7878771_15 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 465.0
BYD3_k127_7878771_16 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 459.0
BYD3_k127_7878771_17 COG3540 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 475.0
BYD3_k127_7878771_18 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 425.0
BYD3_k127_7878771_19 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005824 405.0
BYD3_k127_7878771_2 Belongs to the TPP enzyme family K03336 - 3.7.1.22 2.383e-231 731.0
BYD3_k127_7878771_20 acid phosphatase K14379 - 3.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 403.0
BYD3_k127_7878771_21 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009021 372.0
BYD3_k127_7878771_22 Oxidoreductase family, NAD-binding Rossmann fold K00010 - 1.1.1.18,1.1.1.369 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 375.0
BYD3_k127_7878771_23 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009007 358.0
BYD3_k127_7878771_24 Xylose isomerase-like TIM barrel K03335 - 4.2.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 369.0
BYD3_k127_7878771_25 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006714 358.0
BYD3_k127_7878771_26 KduI/IolB family K03337 - 5.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 308.0
BYD3_k127_7878771_27 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 296.0
BYD3_k127_7878771_28 Helix-turn-helix domain, rpiR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007028 282.0
BYD3_k127_7878771_29 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000001325 287.0
BYD3_k127_7878771_3 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 9.252e-209 679.0
BYD3_k127_7878771_30 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001618 273.0
BYD3_k127_7878771_31 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000038 252.0
BYD3_k127_7878771_32 involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001984 245.0
BYD3_k127_7878771_33 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.0000000000000000000000000000000000000000000000000000000000000003322 251.0
BYD3_k127_7878771_34 Cysteine-rich secretory protein family - - - 0.0000000000000000000000000000000000000000000000000000002578 204.0
BYD3_k127_7878771_35 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000007543 196.0
BYD3_k127_7878771_36 DoxX family K15977 - - 0.00000000000000000000000000000000000000000000009995 174.0
BYD3_k127_7878771_37 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000001735 170.0
BYD3_k127_7878771_38 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000003139 166.0
BYD3_k127_7878771_39 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852,K00856,K10710,K22026 - 2.7.1.15,2.7.1.20,2.7.1.213,2.7.1.218,2.7.1.73 0.000000000000000000000000000000000000000001442 179.0
BYD3_k127_7878771_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819,K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.13,2.6.1.17 4.964e-207 649.0
BYD3_k127_7878771_40 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000000000000000000000000002364 149.0
BYD3_k127_7878771_41 PAP2 superfamily - - - 0.000000000000000000000000000000000000003298 160.0
BYD3_k127_7878771_42 belongs to the Fur family K09826 - - 0.0000000000000000000000000000000000002654 145.0
BYD3_k127_7878771_43 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.00000000000000000000000000000000153 131.0
BYD3_k127_7878771_44 DNA-templated transcription, initiation K03088,K03091 - - 0.00000000000000000000000000000001672 135.0
BYD3_k127_7878771_45 methyltransferase activity - - - 0.00000000000000000000000000000004251 131.0
BYD3_k127_7878771_46 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily K01002 - 2.7.8.20 0.00000000000000000000001325 107.0
BYD3_k127_7878771_47 Binds directly to 16S ribosomal RNA K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000005823 88.0
BYD3_k127_7878771_49 - - - - 0.00000003662 64.0
BYD3_k127_7878771_5 Diguanylate cyclase - - - 1.124e-203 664.0
BYD3_k127_7878771_50 Type II transport protein GspH K08084 - - 0.00000005927 61.0
BYD3_k127_7878771_51 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.000008958 57.0
BYD3_k127_7878771_52 Type IV Pilus-assembly protein W K02672 - - 0.000009012 58.0
BYD3_k127_7878771_54 Staphylococcal nuclease homologues - - - 0.00005064 49.0
BYD3_k127_7878771_55 Ribbon-helix-helix domain - - - 0.0001291 46.0
BYD3_k127_7878771_56 - - - - 0.0004045 50.0
BYD3_k127_7878771_6 Sugar phosphate permease K02445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 607.0
BYD3_k127_7878771_7 PfkB domain protein K03338 - 2.7.1.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 627.0
BYD3_k127_7878771_8 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 558.0
BYD3_k127_7878771_9 Outer membrane protein beta-barrel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002916 572.0
BYD3_k127_7896357_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1048.0
BYD3_k127_7896357_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 1.412e-310 965.0
BYD3_k127_7896357_11 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000007135 173.0
BYD3_k127_7896357_12 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000009521 151.0
BYD3_k127_7896357_13 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000001698 128.0
BYD3_k127_7896357_14 Ribosomal_S15 K02956 - - 0.000000000000000000000000000008528 120.0
BYD3_k127_7896357_15 sister chromatid segregation - - - 0.0000000000000000000000000002339 123.0
BYD3_k127_7896357_16 - - - - 0.000000000000000000000003004 108.0
BYD3_k127_7896357_17 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.0000000000000000000005516 107.0
BYD3_k127_7896357_18 Glycine zipper 2TM domain - - - 0.0005734 46.0
BYD3_k127_7896357_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0036094,GO:0043021,GO:0043024,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 1.615e-272 862.0
BYD3_k127_7896357_3 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 3.569e-265 834.0
BYD3_k127_7896357_4 Participates in both transcription termination and antitermination K02600 - - 2.491e-215 689.0
BYD3_k127_7896357_5 Protein of unknown function (DUF2891) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 486.0
BYD3_k127_7896357_6 N-acyl-L-amino acid amidohydrolase K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 482.0
BYD3_k127_7896357_7 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004471 303.0
BYD3_k127_7896357_8 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001695 282.0
BYD3_k127_7896357_9 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000006389 218.0
BYD3_k127_79085_0 peptidase K07386 - - 6.094e-209 670.0
BYD3_k127_79085_1 SMART Peptidoglycan-binding Lysin subgroup K16291 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 381.0
BYD3_k127_79085_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001046 258.0
BYD3_k127_79085_3 Aminoglycoside 3-N-acetyltransferase K00662 - 2.3.1.81 0.00000000000000000000000000000002246 136.0
BYD3_k127_8221146_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 1.07e-223 696.0
BYD3_k127_8221146_1 amine dehydrogenase activity - - - 8.131e-205 654.0
BYD3_k127_8221146_10 PilZ domain - - - 0.0000006749 59.0
BYD3_k127_8221146_2 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 490.0
BYD3_k127_8221146_3 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 430.0
BYD3_k127_8221146_4 Alkaline phosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006883 417.0
BYD3_k127_8221146_5 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 362.0
BYD3_k127_8221146_6 PFAM transferase hexapeptide repeat containing protein K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000001377 256.0
BYD3_k127_8221146_7 - - - - 0.000000000000000000000000000000000000000000000000000000006988 211.0
BYD3_k127_8221146_8 Membrane K08983 - - 0.000000000000000003409 90.0
BYD3_k127_8225620_0 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 7.724e-219 724.0
BYD3_k127_8225620_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007612 550.0
BYD3_k127_8225620_2 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 436.0
BYD3_k127_8225620_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000001945 245.0
BYD3_k127_8225620_4 PFAM Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000009122 216.0
BYD3_k127_8225620_5 Periplasmic or secreted lipoprotein - - - 0.00000000001971 76.0
BYD3_k127_8298150_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 8.869e-220 691.0
BYD3_k127_8298150_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 416.0
BYD3_k127_8298150_2 Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 382.0
BYD3_k127_8298150_3 FimV C-terminal K08086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 348.0
BYD3_k127_8298150_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 301.0
BYD3_k127_8298150_5 pfam mofrl K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000474 286.0
BYD3_k127_8298150_6 serine threonine protein kinase K11912,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000002339 236.0
BYD3_k127_8298150_7 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000001768 103.0
BYD3_k127_8298150_8 membrane protein, required for colicin V production K03558 - - 0.00000000000000002311 93.0
BYD3_k127_8298150_9 Sporulation related domain K03749 - - 0.00000000002496 76.0
BYD3_k127_8425758_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1432.0
BYD3_k127_8425758_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1176.0
BYD3_k127_8425758_10 PFAM PhoH family protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 415.0
BYD3_k127_8425758_11 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 387.0
BYD3_k127_8425758_12 Glucose / Sorbosone dehydrogenase K00117,K21430 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 372.0
BYD3_k127_8425758_13 PFAM CBS domain K06189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006086 313.0
BYD3_k127_8425758_14 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 294.0
BYD3_k127_8425758_15 Major facilitator superfamily - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006505 289.0
BYD3_k127_8425758_16 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000001154 254.0
BYD3_k127_8425758_17 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000008285 246.0
BYD3_k127_8425758_18 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000002567 217.0
BYD3_k127_8425758_19 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000001636 208.0
BYD3_k127_8425758_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 5.562e-206 648.0
BYD3_k127_8425758_20 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000002349 216.0
BYD3_k127_8425758_21 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000005351 199.0
BYD3_k127_8425758_22 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000003288 189.0
BYD3_k127_8425758_23 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000002531 179.0
BYD3_k127_8425758_24 binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000001368 166.0
BYD3_k127_8425758_25 COG0203 Ribosomal protein L17 K02879 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000004003 161.0
BYD3_k127_8425758_26 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.000000000000000000000000000000000000000004802 159.0
BYD3_k127_8425758_27 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000001377 144.0
BYD3_k127_8425758_28 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000003349 159.0
BYD3_k127_8425758_29 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000000705 145.0
BYD3_k127_8425758_3 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 578.0
BYD3_k127_8425758_30 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000894 138.0
BYD3_k127_8425758_31 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000000002764 122.0
BYD3_k127_8425758_32 Copper chaperone PCu(A)C K09796 - - 0.000000000000000000008337 106.0
BYD3_k127_8425758_33 -acetyltransferase - - - 0.000000000000000004747 91.0
BYD3_k127_8425758_34 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.000000000000006675 85.0
BYD3_k127_8425758_35 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000002485 68.0
BYD3_k127_8425758_36 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000134 61.0
BYD3_k127_8425758_37 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00002509 54.0
BYD3_k127_8425758_4 Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 548.0
BYD3_k127_8425758_5 Serine dehydratase beta chain K01752 - 4.3.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 531.0
BYD3_k127_8425758_6 Splits dipeptides with a prolyl residue in the C- terminal position K01271 - 3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 494.0
BYD3_k127_8425758_7 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 473.0
BYD3_k127_8425758_8 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 490.0
BYD3_k127_8425758_9 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009294 448.0
BYD3_k127_8450121_0 TonB dependent receptor K02014 - - 1.015e-314 979.0
BYD3_k127_8450121_1 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 6.237e-228 722.0
BYD3_k127_8450121_10 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019897,GO:0019898,GO:0031224,GO:0031226,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033036,GO:0033365,GO:0034613,GO:0035639,GO:0036094,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 366.0
BYD3_k127_8450121_11 Saccharopine dehydrogenase NADP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 382.0
BYD3_k127_8450121_12 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009567 357.0
BYD3_k127_8450121_13 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 331.0
BYD3_k127_8450121_14 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 333.0
BYD3_k127_8450121_15 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 331.0
BYD3_k127_8450121_16 alpha/beta hydrolase fold K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 323.0
BYD3_k127_8450121_17 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 331.0
BYD3_k127_8450121_18 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001086 291.0
BYD3_k127_8450121_19 Bacterial virulence factor lipase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000517 296.0
BYD3_k127_8450121_2 Belongs to the RtcB family K14415 - 6.5.1.3 2.921e-218 689.0
BYD3_k127_8450121_20 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002555 258.0
BYD3_k127_8450121_21 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000006346 235.0
BYD3_k127_8450121_22 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000000000001001 209.0
BYD3_k127_8450121_23 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000001444 211.0
BYD3_k127_8450121_24 Protein of unknown function (DUF1318) - - - 0.00000000000000000000000000000000000000000000000000000003288 204.0
BYD3_k127_8450121_25 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000002586 188.0
BYD3_k127_8450121_26 Glycine zipper - - - 0.000000000000000000000000000000000000000000000000002649 199.0
BYD3_k127_8450121_27 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000001365 188.0
BYD3_k127_8450121_28 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000001089 173.0
BYD3_k127_8450121_29 Protein of unknown function (DUF1428) - - - 0.0000000000000000000000000000000000000000000007358 168.0
BYD3_k127_8450121_3 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007096 588.0
BYD3_k127_8450121_30 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000489 155.0
BYD3_k127_8450121_31 Archease protein family (MTH1598/TM1083) - - - 0.00000000000000000000000000000000000000005053 165.0
BYD3_k127_8450121_32 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000001189 155.0
BYD3_k127_8450121_33 receiver - - - 0.0000000000000000000000000000000000000184 161.0
BYD3_k127_8450121_34 Transcriptional regulator - - - 0.00000000000000000000000000000000000006997 145.0
BYD3_k127_8450121_35 YCII-related domain - - - 0.000000000000000000000000000000002352 143.0
BYD3_k127_8450121_36 PFAM Cold-shock protein, DNA-binding - - - 0.00000000000000000000000000002769 123.0
BYD3_k127_8450121_37 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000002261 113.0
BYD3_k127_8450121_38 YCII-related domain - - - 0.0000000000000000000000008892 109.0
BYD3_k127_8450121_39 there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc K02913 - - 0.000000000000000000004107 94.0
BYD3_k127_8450121_4 Major Facilitator Superfamily K08167 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 571.0
BYD3_k127_8450121_40 IMP dehydrogenase activity - - - 0.00000000000000000002602 100.0
BYD3_k127_8450121_41 signal transduction protein with EFhand domain - - - 0.0000000005318 65.0
BYD3_k127_8450121_42 Sporulation related domain - - - 0.000001496 59.0
BYD3_k127_8450121_5 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009975 479.0
BYD3_k127_8450121_6 PFAM acyl-CoA dehydrogenase domain protein K00252 - 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 480.0
BYD3_k127_8450121_7 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 451.0
BYD3_k127_8450121_8 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 433.0
BYD3_k127_8450121_9 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009164 403.0
BYD3_k127_8494186_0 TonB dependent receptor K02014 - - 2.732e-294 929.0
BYD3_k127_8494186_1 small GTP-binding protein K02355 - - 7.456e-294 915.0
BYD3_k127_8494186_10 Subtilase family - - - 4.58e-228 730.0
BYD3_k127_8494186_100 Oxidoreductase FAD-binding domain K02613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002321 291.0
BYD3_k127_8494186_101 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003533 289.0
BYD3_k127_8494186_102 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000546 305.0
BYD3_k127_8494186_103 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007581 282.0
BYD3_k127_8494186_104 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002551 293.0
BYD3_k127_8494186_105 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007859 269.0
BYD3_k127_8494186_106 Belongs to the GST superfamily K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000001504 265.0
BYD3_k127_8494186_107 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000008092 268.0
BYD3_k127_8494186_108 serine protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000187 280.0
BYD3_k127_8494186_109 Belongs to the WrbA family K03809 GO:0000166,GO:0003674,GO:0003824,GO:0003955,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0010181,GO:0016043,GO:0016491,GO:0016651,GO:0016655,GO:0022607,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000002434 268.0
BYD3_k127_8494186_11 Sodium:sulfate symporter transmembrane region - - - 9.884e-228 721.0
BYD3_k127_8494186_110 belongs to the nudix hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003215 263.0
BYD3_k127_8494186_111 Peptidase family S51 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004142 268.0
BYD3_k127_8494186_112 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000004709 258.0
BYD3_k127_8494186_113 peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000006489 261.0
BYD3_k127_8494186_114 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000004997 236.0
BYD3_k127_8494186_115 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000001425 241.0
BYD3_k127_8494186_116 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000000000000000000005869 231.0
BYD3_k127_8494186_117 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000008306 223.0
BYD3_k127_8494186_118 peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000000000000000000000141 232.0
BYD3_k127_8494186_119 TIGRFAM beta-ketoadipate pathway transcriptional regulators, PcaR PcaU PobR family K02624 - - 0.000000000000000000000000000000000000000000000000000000000002139 218.0
BYD3_k127_8494186_12 Belongs to the catalase family K03781 - 1.11.1.6 6.23e-223 699.0
BYD3_k127_8494186_120 Papain-like cysteine protease AvrRpt2 - - - 0.0000000000000000000000000000000000000000000000000000000001129 211.0
BYD3_k127_8494186_121 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000006456 201.0
BYD3_k127_8494186_122 KR domain - - - 0.000000000000000000000000000000000000000000000000000006049 198.0
BYD3_k127_8494186_123 Domain of unknown function (DUF4382) - - - 0.00000000000000000000000000000000000000000000000000003582 201.0
BYD3_k127_8494186_124 Glyoxalase-like domain K08234 - - 0.000000000000000000000000000000000000000000000000003833 185.0
BYD3_k127_8494186_125 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000006751 203.0
BYD3_k127_8494186_126 COG0685 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000004668 189.0
BYD3_k127_8494186_127 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000000619 183.0
BYD3_k127_8494186_128 Pfam:DUF59 K02612 GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000007698 182.0
BYD3_k127_8494186_129 molybdenum cofactor guanylyltransferase activity K03637,K03752,K13818 - 2.7.7.77,4.6.1.17 0.0000000000000000000000000000000000000000000000001909 190.0
BYD3_k127_8494186_13 Peptidase family M49 - - - 2.84e-214 689.0
BYD3_k127_8494186_130 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.0000000000000000000000000000000000000000000000003669 181.0
BYD3_k127_8494186_131 XdhC and CoxI family - - - 0.0000000000000000000000000000000000000000000000004003 200.0
BYD3_k127_8494186_132 Cupin domain - - - 0.0000000000000000000000000000000000000000000000007045 184.0
BYD3_k127_8494186_133 DoxX-like family K15977 - - 0.000000000000000000000000000000000000000000000004271 182.0
BYD3_k127_8494186_134 PRC-barrel domain - - - 0.00000000000000000000000000000000000000000000004335 172.0
BYD3_k127_8494186_135 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000003918 177.0
BYD3_k127_8494186_136 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000001546 181.0
BYD3_k127_8494186_137 Sortilin, neurotensin receptor 3, - - - 0.00000000000000000000000000000000000000000001516 181.0
BYD3_k127_8494186_138 phenylacetic acid degradation protein K02614 - - 0.0000000000000000000000000000000000000000000166 166.0
BYD3_k127_8494186_139 - - - - 0.000000000000000000000000000000000000000002918 169.0
BYD3_k127_8494186_14 TonB-dependent receptor plug - - - 1.017e-213 689.0
BYD3_k127_8494186_140 - - - - 0.00000000000000000000000000000000000000002342 165.0
BYD3_k127_8494186_141 Phenylacetic acid degradation B K02610 - - 0.00000000000000000000000000000000000000002857 153.0
BYD3_k127_8494186_142 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000004406 162.0
BYD3_k127_8494186_143 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000000000000000002053 152.0
BYD3_k127_8494186_144 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000006864 151.0
BYD3_k127_8494186_145 COG3201 Nicotinamide mononucleotide transporter K03811 - - 0.0000000000000000000000000000000000001873 147.0
BYD3_k127_8494186_146 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000001491 147.0
BYD3_k127_8494186_147 ArsC family K00537 - 1.20.4.1 0.000000000000000000000000000000000002597 147.0
BYD3_k127_8494186_148 Transcription elongation factor, GreA/GreB, C-term - - - 0.000000000000000000000000000000000004276 141.0
BYD3_k127_8494186_149 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000000006129 149.0
BYD3_k127_8494186_15 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 3.028e-211 684.0
BYD3_k127_8494186_150 Lysophospholipase - GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0008150,GO:0008152,GO:0016020,GO:0016298,GO:0016787,GO:0016788,GO:0044238,GO:0071704 - 0.00000000000000000000000000000000002672 146.0
BYD3_k127_8494186_151 Transglycosylase associated protein - - - 0.0000000000000000000000000000000002899 136.0
BYD3_k127_8494186_152 Gluconate 2-dehydrogenase subunit 3 K06152 - 1.1.99.3 0.000000000000000000000000000000001159 138.0
BYD3_k127_8494186_153 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000001557 141.0
BYD3_k127_8494186_154 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000000009726 131.0
BYD3_k127_8494186_155 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000001524 132.0
BYD3_k127_8494186_156 Indole-3-glycerol phosphate synthase - - - 0.00000000000000000000000000000003518 144.0
BYD3_k127_8494186_157 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000002426 128.0
BYD3_k127_8494186_158 - - - - 0.000000000000000000000000000007999 121.0
BYD3_k127_8494186_159 PFAM Activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000003905 121.0
BYD3_k127_8494186_16 PTS system, glucose subfamily, IIA K11189 - - 5.415e-210 681.0
BYD3_k127_8494186_160 - - - - 0.00000000000000000000000000009459 126.0
BYD3_k127_8494186_161 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.0000000000000000000000000003749 126.0
BYD3_k127_8494186_162 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000001198 118.0
BYD3_k127_8494186_163 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000005248 119.0
BYD3_k127_8494186_164 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 0.0000000000000000000000001273 115.0
BYD3_k127_8494186_165 - - - - 0.0000000000000000000000004022 119.0
BYD3_k127_8494186_166 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.00000000000000000000002322 108.0
BYD3_k127_8494186_167 Prokaryotic dksA/traR C4-type zinc finger - - - 0.00000000000000000000005177 102.0
BYD3_k127_8494186_168 ThiS family - - - 0.0000000000000000005583 98.0
BYD3_k127_8494186_169 Protein of unknown function (DUF3309) - - - 0.00000000000000000232 88.0
BYD3_k127_8494186_17 PFAM Beta-lactamase - - - 2.048e-207 677.0
BYD3_k127_8494186_170 Cytochrome c - - - 0.00000000000000009622 89.0
BYD3_k127_8494186_171 YKOF-related Family - - - 0.0000000000000001253 81.0
BYD3_k127_8494186_172 - - - - 0.000000000000004109 83.0
BYD3_k127_8494186_174 - - - - 0.0000000000005771 73.0
BYD3_k127_8494186_175 - - - - 0.00000000001565 72.0
BYD3_k127_8494186_177 Domain of unknown function (DUF4136) - - - 0.000000001199 68.0
BYD3_k127_8494186_178 PFAM Choline ethanolamine kinase - - - 0.000000006735 68.0
BYD3_k127_8494186_179 Beta-lactamase - - - 0.00000001519 59.0
BYD3_k127_8494186_18 choline dehydrogenase activity - - - 1.413e-206 665.0
BYD3_k127_8494186_180 SnoaL-like domain - - - 0.00000003734 60.0
BYD3_k127_8494186_182 Transcriptional regulatory protein, C terminal - - - 0.0000003162 63.0
BYD3_k127_8494186_183 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000005911 59.0
BYD3_k127_8494186_19 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 2.376e-196 619.0
BYD3_k127_8494186_2 (ABC) transporter K06147,K06148 - - 1.344e-288 898.0
BYD3_k127_8494186_20 acyl-CoA dehydrogenase - - - 3.353e-196 634.0
BYD3_k127_8494186_21 amidohydrolase - - - 7.209e-196 621.0
BYD3_k127_8494186_22 PTS system, N-acetylglucosamine-specific K02803,K02804 - 2.7.1.193 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 616.0
BYD3_k127_8494186_23 Belongs to the thiolase family K00626,K00632,K07823 - 2.3.1.16,2.3.1.174,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 584.0
BYD3_k127_8494186_24 3-hydroxyacyl-coa dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 599.0
BYD3_k127_8494186_25 aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 569.0
BYD3_k127_8494186_26 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 574.0
BYD3_k127_8494186_27 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 554.0
BYD3_k127_8494186_28 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000712 551.0
BYD3_k127_8494186_29 TonB-dependent receptor plug K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 546.0
BYD3_k127_8494186_3 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 3.972e-281 885.0
BYD3_k127_8494186_30 Phenylacetate-CoA oxygenase K02609 - 1.14.13.149 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009244 527.0
BYD3_k127_8494186_31 Belongs to the amidase family K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 535.0
BYD3_k127_8494186_32 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009372 541.0
BYD3_k127_8494186_33 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 509.0
BYD3_k127_8494186_34 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 505.0
BYD3_k127_8494186_35 alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 507.0
BYD3_k127_8494186_36 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 509.0
BYD3_k127_8494186_37 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 490.0
BYD3_k127_8494186_38 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007961 491.0
BYD3_k127_8494186_39 Belongs to the peptidase M24B family K01271 - 3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 487.0
BYD3_k127_8494186_4 dehydrogenase, E1 component K11381 - 1.2.4.4 6.917e-275 866.0
BYD3_k127_8494186_40 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 493.0
BYD3_k127_8494186_41 E COG0620 Methionine synthase II (cobalamin-independent) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 509.0
BYD3_k127_8494186_42 ribosomal rna small subunit methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 478.0
BYD3_k127_8494186_43 glycolate oxidase subunit GlcD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 473.0
BYD3_k127_8494186_44 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 468.0
BYD3_k127_8494186_45 Aminotransferase, class V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 468.0
BYD3_k127_8494186_46 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 462.0
BYD3_k127_8494186_47 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 454.0
BYD3_k127_8494186_48 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 473.0
BYD3_k127_8494186_49 COG2133 Glucose sorbosone dehydrogenases K21430 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016901,GO:0019842,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046872,GO:0048037,GO:0048038,GO:0055114,GO:0070968,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 451.0
BYD3_k127_8494186_5 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 1.996e-264 837.0
BYD3_k127_8494186_50 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 449.0
BYD3_k127_8494186_51 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 456.0
BYD3_k127_8494186_52 Mo-co oxidoreductase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 435.0
BYD3_k127_8494186_53 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 426.0
BYD3_k127_8494186_54 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 446.0
BYD3_k127_8494186_55 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 430.0
BYD3_k127_8494186_56 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 419.0
BYD3_k127_8494186_57 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 415.0
BYD3_k127_8494186_58 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004745 407.0
BYD3_k127_8494186_59 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008048 419.0
BYD3_k127_8494186_6 TonB-dependent receptor - - - 4.092e-239 762.0
BYD3_k127_8494186_60 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 404.0
BYD3_k127_8494186_61 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009851 423.0
BYD3_k127_8494186_62 efflux protein, MATE family K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002827 410.0
BYD3_k127_8494186_63 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 391.0
BYD3_k127_8494186_64 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 386.0
BYD3_k127_8494186_65 NYN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 383.0
BYD3_k127_8494186_66 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007438 399.0
BYD3_k127_8494186_67 MTH538 TIR-like domain (DUF1863) K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004457 398.0
BYD3_k127_8494186_68 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 376.0
BYD3_k127_8494186_69 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 398.0
BYD3_k127_8494186_7 Hydrolase CocE NonD family - - - 4.056e-236 756.0
BYD3_k127_8494186_70 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 370.0
BYD3_k127_8494186_71 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 377.0
BYD3_k127_8494186_72 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004538 363.0
BYD3_k127_8494186_73 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000545 371.0
BYD3_k127_8494186_74 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 362.0
BYD3_k127_8494186_75 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 374.0
BYD3_k127_8494186_76 e3 binding domain K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003895 365.0
BYD3_k127_8494186_77 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 364.0
BYD3_k127_8494186_78 Sigma factor regulator FecR K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 364.0
BYD3_k127_8494186_79 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 351.0
BYD3_k127_8494186_8 Beta-lactamase - - - 1.316e-235 750.0
BYD3_k127_8494186_80 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005894 355.0
BYD3_k127_8494186_81 UTRA K03710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 343.0
BYD3_k127_8494186_82 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 349.0
BYD3_k127_8494186_83 Acyl-CoA thioesterase K10805 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 344.0
BYD3_k127_8494186_84 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 343.0
BYD3_k127_8494186_85 dipeptidase activity K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 337.0
BYD3_k127_8494186_86 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007736 330.0
BYD3_k127_8494186_87 Conserved TM helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 333.0
BYD3_k127_8494186_88 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 346.0
BYD3_k127_8494186_89 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 331.0
BYD3_k127_8494186_9 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 1.115e-229 735.0
BYD3_k127_8494186_90 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009476 321.0
BYD3_k127_8494186_91 Phytanoyl-CoA dioxygenase (PhyH) K00477 - 1.14.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 319.0
BYD3_k127_8494186_92 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 321.0
BYD3_k127_8494186_93 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 311.0
BYD3_k127_8494186_94 WYL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 307.0
BYD3_k127_8494186_95 NADP oxidoreductase, coenzyme f420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 302.0
BYD3_k127_8494186_96 citrate synthase K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 311.0
BYD3_k127_8494186_97 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 297.0
BYD3_k127_8494186_98 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006825 289.0
BYD3_k127_8494186_99 phenylacetic acid degradation protein K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 291.0
BYD3_k127_8496278_0 peptidase K01354 - 3.4.21.83 1.129e-292 914.0
BYD3_k127_8496278_1 acyl-CoA dehydrogenase K06445 - - 2.852e-275 869.0
BYD3_k127_8496278_10 Dak2 K07030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 482.0
BYD3_k127_8496278_11 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 464.0
BYD3_k127_8496278_12 Peptidoglycan-binding domain 1 protein K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000751 441.0
BYD3_k127_8496278_13 COG0665 Glycine D-amino acid oxidases (deaminating) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 421.0
BYD3_k127_8496278_14 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008452 417.0
BYD3_k127_8496278_15 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 409.0
BYD3_k127_8496278_16 Zn_pept - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006527 411.0
BYD3_k127_8496278_17 abc transporter atp-binding protein K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 378.0
BYD3_k127_8496278_18 ATP ADP translocase K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 358.0
BYD3_k127_8496278_19 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 349.0
BYD3_k127_8496278_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 2.628e-267 835.0
BYD3_k127_8496278_20 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 332.0
BYD3_k127_8496278_21 Protein of unknown function (DUF1282) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 342.0
BYD3_k127_8496278_22 polyphosphate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 336.0
BYD3_k127_8496278_23 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 324.0
BYD3_k127_8496278_24 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004149 306.0
BYD3_k127_8496278_25 Putative prokaryotic signal transducing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007776 296.0
BYD3_k127_8496278_26 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 299.0
BYD3_k127_8496278_27 ATPases associated with a variety of cellular activities K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 310.0
BYD3_k127_8496278_28 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K14161 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002729 312.0
BYD3_k127_8496278_29 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004066 289.0
BYD3_k127_8496278_3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 5.485e-260 813.0
BYD3_k127_8496278_30 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003739 263.0
BYD3_k127_8496278_31 Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers K06955 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050664,GO:0051287,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000006477 259.0
BYD3_k127_8496278_32 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000002603 222.0
BYD3_k127_8496278_33 (twin-arginine translocation) pathway signal - - - 0.000000000000000000000000000000000000000000000000000000007937 209.0
BYD3_k127_8496278_34 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000006138 191.0
BYD3_k127_8496278_35 PFAM peptidase M15B and M15C DD-carboxypeptidase VanY endolysin - - - 0.000000000000000000000000000000000000000000000000005253 193.0
BYD3_k127_8496278_36 COG0655 Multimeric flavodoxin WrbA - - - 0.0000000000000000000000000000000000000000000000006358 181.0
BYD3_k127_8496278_37 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000756 173.0
BYD3_k127_8496278_38 MASE1 - - - 0.0000000000000000000000000000000000000000000001112 186.0
BYD3_k127_8496278_39 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.0000000000000000000000000000000000000000000001453 172.0
BYD3_k127_8496278_4 Belongs to the GcvT family K00302 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.5.3.1 1.288e-254 822.0
BYD3_k127_8496278_40 - - - - 0.0000000000000000000000000000000000000000004808 164.0
BYD3_k127_8496278_41 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000000000000001897 159.0
BYD3_k127_8496278_42 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000004022 163.0
BYD3_k127_8496278_43 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000663 156.0
BYD3_k127_8496278_44 - K01992 - - 0.000000000000000000000000000000000000002217 162.0
BYD3_k127_8496278_45 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000004891 156.0
BYD3_k127_8496278_47 - - - - 0.0000000000000000000000000000000000004575 144.0
BYD3_k127_8496278_48 Protein of unknown function (DUF3667) - - - 0.00000000000000000000000000000000001028 155.0
BYD3_k127_8496278_49 - - - - 0.00000000000000000000000000000000003324 142.0
BYD3_k127_8496278_5 peroxidase - - - 1.3e-213 670.0
BYD3_k127_8496278_50 Sarcosine oxidase, delta subunit family K00304 - 1.5.3.1 0.00000000000000000000000000000001717 127.0
BYD3_k127_8496278_51 ABC transporter substrate-binding protein K02067 - - 0.000000000000000000000000000005533 131.0
BYD3_k127_8496278_52 CAAX protease self-immunity K07052 - - 0.000000000000000000000000006861 120.0
BYD3_k127_8496278_53 Rhodanese Homology Domain K03972 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005623,GO:0016740,GO:0016782,GO:0016783,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.0000000000000000000000001287 110.0
BYD3_k127_8496278_54 Diguanylate cyclase - - - 0.000000000000000000000006021 117.0
BYD3_k127_8496278_55 Protein of unknown function (DUF3144) - - - 0.00000000000000000000007207 102.0
BYD3_k127_8496278_56 Belongs to the UPF0235 family K09131 - - 0.0000000000000000000001592 100.0
BYD3_k127_8496278_57 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000005678 98.0
BYD3_k127_8496278_58 - - - - 0.000000000000000001347 91.0
BYD3_k127_8496278_59 Dodecin K09165 - - 0.000000000000000001993 90.0
BYD3_k127_8496278_6 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00383 - 1.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 571.0
BYD3_k127_8496278_60 - - - - 0.000000000000000003556 88.0
BYD3_k127_8496278_61 - - - - 0.00000000000000005967 87.0
BYD3_k127_8496278_62 helix_turn_helix ASNC type K03719 - - 0.0000000000000001246 85.0
BYD3_k127_8496278_63 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000001425 94.0
BYD3_k127_8496278_64 - - - - 0.000000000001515 74.0
BYD3_k127_8496278_65 Type II secretion system protein B K02451 - - 0.00000000008147 76.0
BYD3_k127_8496278_66 ABC-type transport auxiliary lipoprotein component K18480 - - 0.000000002595 70.0
BYD3_k127_8496278_67 Maltose operon periplasmic protein precursor (MalM) K05775 - - 0.000000004337 66.0
BYD3_k127_8496278_68 LemA family K03744 - - 0.00000006086 62.0
BYD3_k127_8496278_69 chaperone-mediated protein folding - - - 0.0000003382 64.0
BYD3_k127_8496278_7 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 548.0
BYD3_k127_8496278_70 Putative adhesin - - - 0.0000003746 63.0
BYD3_k127_8496278_71 TIGRFAM sarcosine oxidase, gamma subunit family, heterotetrameric form K00305 - 1.5.3.1 0.0000214 55.0
BYD3_k127_8496278_72 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.0002177 44.0
BYD3_k127_8496278_8 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 525.0
BYD3_k127_8496278_9 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000551 475.0
BYD3_k127_8531359_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006457,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015627,GO:0015628,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042802,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061077,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:0098776,GO:1901265,GO:1901363,GO:1904680 - 3.026e-300 936.0
BYD3_k127_8531359_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 1.936e-200 632.0
BYD3_k127_8531359_10 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.00000000000000000000000000000000000003153 163.0
BYD3_k127_8531359_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 589.0
BYD3_k127_8531359_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 504.0
BYD3_k127_8531359_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 437.0
BYD3_k127_8531359_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 381.0
BYD3_k127_8531359_6 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 334.0
BYD3_k127_8531359_7 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 338.0
BYD3_k127_8531359_8 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 316.0
BYD3_k127_8531359_9 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003053 254.0
BYD3_k127_85568_0 DNA ligase K01971 - 6.5.1.1 0.0 1060.0
BYD3_k127_85568_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 1.685e-285 889.0
BYD3_k127_85568_10 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 2.792e-202 658.0
BYD3_k127_85568_11 Cytochrome c-type biogenesis protein CcmF K02198 - - 5.128e-196 627.0
BYD3_k127_85568_12 Belongs to the citrate synthase family K01659 - 2.3.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 589.0
BYD3_k127_85568_13 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 538.0
BYD3_k127_85568_14 belongs to the aldehyde dehydrogenase family K00128,K00154 - 1.2.1.3,1.2.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 516.0
BYD3_k127_85568_15 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 487.0
BYD3_k127_85568_16 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 475.0
BYD3_k127_85568_17 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 457.0
BYD3_k127_85568_18 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004784 451.0
BYD3_k127_85568_19 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 422.0
BYD3_k127_85568_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 7.701e-271 849.0
BYD3_k127_85568_20 component I K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008387 443.0
BYD3_k127_85568_21 Belongs to the Orn Lys Arg decarboxylase class-II family K00928,K12526 - 2.7.2.4,4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006159 418.0
BYD3_k127_85568_22 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 409.0
BYD3_k127_85568_23 Electron transfer flavoprotein K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 402.0
BYD3_k127_85568_24 Domain of unknown function (DUF4010) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 385.0
BYD3_k127_85568_25 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 387.0
BYD3_k127_85568_26 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009188 369.0
BYD3_k127_85568_27 PFAM Pyruvate carboxyltransferase K01640,K18314 - 4.1.3.4,4.1.3.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 354.0
BYD3_k127_85568_28 (ABC) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006492 357.0
BYD3_k127_85568_29 malonyl CoA-acyl carrier protein transacylase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 346.0
BYD3_k127_85568_3 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 9.351e-245 779.0
BYD3_k127_85568_30 transporter, permease K02033,K15581 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 346.0
BYD3_k127_85568_31 COGs COG5616 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008352 356.0
BYD3_k127_85568_32 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 343.0
BYD3_k127_85568_33 electron transfer flavoprotein beta subunit K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 335.0
BYD3_k127_85568_34 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 335.0
BYD3_k127_85568_35 Glutathione-dependent formaldehyde-activating enzyme K03396 - 4.4.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004955 308.0
BYD3_k127_85568_36 Binding-protein-dependent transport system inner membrane component K02034,K15582 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 321.0
BYD3_k127_85568_37 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 311.0
BYD3_k127_85568_38 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 308.0
BYD3_k127_85568_39 exonuclease activity K16899 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 323.0
BYD3_k127_85568_4 Flavin containing amine oxidoreductase - - - 3.761e-224 714.0
BYD3_k127_85568_40 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 292.0
BYD3_k127_85568_41 Oligopeptide/dipeptide transporter, C-terminal region K02031,K15583 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0008144,GO:0016020,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 290.0
BYD3_k127_85568_42 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004698 299.0
BYD3_k127_85568_43 PFAM Endonuclease Exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000174 273.0
BYD3_k127_85568_44 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000101 267.0
BYD3_k127_85568_45 PFAM aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001399 267.0
BYD3_k127_85568_46 Belongs to the ABC transporter superfamily K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002681 282.0
BYD3_k127_85568_47 EamA-like transporter family K15268 - - 0.000000000000000000000000000000000000000000000000000000000000000000000038 252.0
BYD3_k127_85568_48 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002884 264.0
BYD3_k127_85568_49 bacteriocin transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000481 241.0
BYD3_k127_85568_5 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 - 3.1.11.5 1.476e-222 731.0
BYD3_k127_85568_50 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000001186 219.0
BYD3_k127_85568_51 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006208,GO:0006212,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0017144,GO:0019860,GO:0034641,GO:0042737,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000007198 217.0
BYD3_k127_85568_52 PFAM Aminotransferase, class IV K02619 - 4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000105 219.0
BYD3_k127_85568_53 Peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000188 214.0
BYD3_k127_85568_54 MaoC like domain - - - 0.00000000000000000000000000000000000000000000000000000002541 207.0
BYD3_k127_85568_55 Periplasmic protein thiol K02199 - - 0.0000000000000000000000000000000000000000000000000000002069 204.0
BYD3_k127_85568_56 MerR family regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000005886 194.0
BYD3_k127_85568_57 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000002323 202.0
BYD3_k127_85568_58 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000000000000000001408 190.0
BYD3_k127_85568_59 COG3156 Type II secretory pathway, component PulK K02460 - - 0.0000000000000000000000000000000000000000000000000008803 204.0
BYD3_k127_85568_6 3-hydroxyacyl-coa dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 1.142e-216 692.0
BYD3_k127_85568_61 PFAM regulatory protein TetR - - - 0.000000000000000000000000000000000000000000000000001406 191.0
BYD3_k127_85568_62 Pilus assembly protein PilZ K02676 - - 0.00000000000000000000000000000000000000000000000005543 183.0
BYD3_k127_85568_63 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000001508 175.0
BYD3_k127_85568_64 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000001923 163.0
BYD3_k127_85568_65 DNA polymerase III subunit delta K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000001323 172.0
BYD3_k127_85568_66 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000000002583 159.0
BYD3_k127_85568_67 Cytochrome C biogenesis K02200 - - 0.00000000000000000000000000000000000000004693 171.0
BYD3_k127_85568_68 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000009068 164.0
BYD3_k127_85568_69 Thioesterase superfamily K07107 - - 0.000000000000000000000000000000000000005078 166.0
BYD3_k127_85568_7 2-methylcitrate dehydratase K01720 - 4.2.1.79 1.132e-207 660.0
BYD3_k127_85568_70 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000000000000000000000001801 147.0
BYD3_k127_85568_71 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000004442 128.0
BYD3_k127_85568_72 subunit of a heme lyase K02200 - - 0.0000000000000000000000000000005962 135.0
BYD3_k127_85568_73 Type II secretion system (T2SS), protein J - - - 0.00000000000000000000000000002314 131.0
BYD3_k127_85568_75 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000917 116.0
BYD3_k127_85568_76 Tetratricopeptide repeat - - - 0.0000000000000000000000175 115.0
BYD3_k127_85568_78 general secretion pathway protein K02458 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.000000000000000000002405 101.0
BYD3_k127_85568_79 - - - - 0.000000000000000000003083 107.0
BYD3_k127_85568_8 Zinc-binding dehydrogenase K00121 - 1.1.1.1,1.1.1.284 1.876e-205 643.0
BYD3_k127_85568_80 TIGRFAM TonB family protein K03832 - - 0.000000000000000000007025 100.0
BYD3_k127_85568_81 relative of glutathione S-transferase, MAPEG superfamily K07136 - - 0.00000000000000000002082 102.0
BYD3_k127_85568_82 Type II secretion system (T2SS), protein N - - - 0.00000000000000000002229 100.0
BYD3_k127_85568_83 Type II secretion system (T2SS), protein L K02461 - - 0.0000000000000000000871 102.0
BYD3_k127_85568_84 Domain of unknown function (DUF1330) - - - 0.0000000000000000001412 94.0
BYD3_k127_85568_85 Type II transport protein GspH K02457 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000001413 95.0
BYD3_k127_85568_86 Beta-L-arabinofuranosidase, GH127 K09955 - - 0.000000000000000003311 91.0
BYD3_k127_85568_87 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000001926 80.0
BYD3_k127_85568_88 proteolysis - - - 0.000000000000006708 82.0
BYD3_k127_85568_89 TraX protein - - - 0.00000000000001327 85.0
BYD3_k127_85568_9 Acetyl-CoA dehydrogenase C-terminal like - - - 1.542e-203 657.0
BYD3_k127_85568_90 MTH538 TIR-like domain (DUF1863) - - - 0.00000000000003497 80.0
BYD3_k127_85568_91 Transcriptional regulator, ArsR family K03892 - - 0.0000000000001698 76.0
BYD3_k127_85568_92 Beta-L-arabinofuranosidase, GH127 K09955 - - 0.0000000000003898 74.0
BYD3_k127_85568_93 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000007614 65.0
BYD3_k127_85568_94 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 - - 0.000000001786 65.0
BYD3_k127_8887198_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 3.406e-286 902.0
BYD3_k127_8887198_1 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 548.0
BYD3_k127_8887198_10 abc transporter atp-binding protein K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 370.0
BYD3_k127_8887198_11 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093 327.0
BYD3_k127_8887198_12 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 319.0
BYD3_k127_8887198_13 polyphosphate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003943 330.0
BYD3_k127_8887198_14 ATPases associated with a variety of cellular activities K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465 323.0
BYD3_k127_8887198_15 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 301.0
BYD3_k127_8887198_16 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000009642 269.0
BYD3_k127_8887198_17 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001649 267.0
BYD3_k127_8887198_18 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000016 274.0
BYD3_k127_8887198_19 D-alanyl-D-alanine carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000002626 210.0
BYD3_k127_8887198_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 537.0
BYD3_k127_8887198_20 carbonic - - - 0.00000000000000000000000000000000000000000000000001569 197.0
BYD3_k127_8887198_21 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.000000000000000000000000000000000000000000000208 171.0
BYD3_k127_8887198_22 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000001799 161.0
BYD3_k127_8887198_23 Belongs to the Smg family K03747 - - 0.000000000000000000000000000000000000002371 156.0
BYD3_k127_8887198_24 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000001851 150.0
BYD3_k127_8887198_25 MlaD protein K02067,K06192 - - 0.0000000000000000000000000000000000002471 153.0
BYD3_k127_8887198_26 - K01992 - - 0.0000000000000000000000000000000000008365 158.0
BYD3_k127_8887198_27 LemA family K03744 - - 0.00000000000000001836 91.0
BYD3_k127_8887198_28 AntiSigma factor - - - 0.000000000000181 82.0
BYD3_k127_8887198_29 Putative adhesin - - - 0.0000000001592 74.0
BYD3_k127_8887198_3 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 503.0
BYD3_k127_8887198_30 ABC-type transport auxiliary lipoprotein component K18480 - - 0.0000000007527 69.0
BYD3_k127_8887198_4 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966 483.0
BYD3_k127_8887198_5 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 432.0
BYD3_k127_8887198_6 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 414.0
BYD3_k127_8887198_7 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 401.0
BYD3_k127_8887198_8 COG0665 Glycine D-amino acid oxidases (deaminating) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008692 394.0
BYD3_k127_8887198_9 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004191 387.0
BYD3_k127_8896310_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0 1730.0
BYD3_k127_8896310_1 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1527.0
BYD3_k127_8896310_10 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 3.527e-250 781.0
BYD3_k127_8896310_100 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000007446 179.0
BYD3_k127_8896310_101 Riboflavin synthase K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000001144 196.0
BYD3_k127_8896310_102 Belongs to the DnaA family. HdA subfamily K10763 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030174,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:2000104,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000005633 185.0
BYD3_k127_8896310_103 Evidence 4 Homologs of previously reported genes of K09700 - - 0.0000000000000000000000000000000000000000000002732 168.0
BYD3_k127_8896310_104 PFAM Alkyl hydroperoxide reductase K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000003704 171.0
BYD3_k127_8896310_105 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000001035 179.0
BYD3_k127_8896310_106 NUDIX domain K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000002186 179.0
BYD3_k127_8896310_107 TIGRFAM SUF system FeS K04488 - - 0.0000000000000000000000000000000000000000001394 179.0
BYD3_k127_8896310_108 MlaD protein K02067 - - 0.000000000000000000000000000000000000000001211 161.0
BYD3_k127_8896310_109 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.000000000000000000000000000000000000000001502 164.0
BYD3_k127_8896310_11 MatE - - - 1.255e-238 744.0
BYD3_k127_8896310_111 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.00000000000000000000000000000000000000006201 157.0
BYD3_k127_8896310_112 Domain of unknown function (DUF1820) - - - 0.00000000000000000000000000000000000000008015 153.0
BYD3_k127_8896310_113 transport system permease component - - - 0.0000000000000000000000000000000000000001127 160.0
BYD3_k127_8896310_114 ABC-type transport system involved in resistance to organic solvents auxiliary component K07323 - - 0.0000000000000000000000000000000000000001584 161.0
BYD3_k127_8896310_115 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000003575 154.0
BYD3_k127_8896310_116 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000005949 158.0
BYD3_k127_8896310_117 PFAM CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.0000000000000000000000000000000000003368 161.0
BYD3_k127_8896310_118 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000005545 138.0
BYD3_k127_8896310_119 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000002121 145.0
BYD3_k127_8896310_12 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 5.343e-237 745.0
BYD3_k127_8896310_120 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000000000001368 131.0
BYD3_k127_8896310_121 MAPEG family - - - 0.0000000000000000000000000000008376 131.0
BYD3_k127_8896310_122 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000001797 129.0
BYD3_k127_8896310_123 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000003059 125.0
BYD3_k127_8896310_124 protein conserved in bacteria K09938 - - 0.000000000000000000000000001065 128.0
BYD3_k127_8896310_125 transcriptional regulator - - - 0.000000000000000000000000003158 128.0
BYD3_k127_8896310_127 Glycosyltransferase like family K07011 - - 0.00000000000000000000000001629 122.0
BYD3_k127_8896310_128 DNA polymerase III, chi subunit K02339 GO:0005575,GO:0005622,GO:0005623,GO:0006275,GO:0008150,GO:0009314,GO:0009360,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010556,GO:0010557,GO:0010604,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032298,GO:0032991,GO:0042575,GO:0043846,GO:0043847,GO:0044424,GO:0044464,GO:0045740,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0060255,GO:0061695,GO:0065007,GO:0080090,GO:0090329,GO:1902494,GO:1990234,GO:2000105,GO:2000112 2.7.7.7 0.000000000000000000000002936 108.0
BYD3_k127_8896310_129 Type VI secretion system FHA domain protein K11894,K11913 - - 0.000000000000000000000008893 114.0
BYD3_k127_8896310_13 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 3.684e-232 743.0
BYD3_k127_8896310_130 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000001998 102.0
BYD3_k127_8896310_131 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0016787,GO:0016817,GO:0016818,GO:0050896 3.6.1.7 0.0000000000000000005811 90.0
BYD3_k127_8896310_132 pfam rdd - - - 0.0000000000000000006505 93.0
BYD3_k127_8896310_133 Poly(hydroxyalcanoate) granule associated protein - - - 0.0000000000000000007851 94.0
BYD3_k127_8896310_134 MAPEG family - - - 0.00000000000000001736 89.0
BYD3_k127_8896310_135 - - - - 0.000000000000001822 79.0
BYD3_k127_8896310_136 Protein of unknown function (DUF1289) - - - 0.0000000000005864 70.0
BYD3_k127_8896310_137 DNA excision K07733 - - 0.00000000003459 68.0
BYD3_k127_8896310_138 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000001977 66.0
BYD3_k127_8896310_139 NTP binding protein (Contains STAS domain) K07122 - - 0.0000001064 58.0
BYD3_k127_8896310_14 PFAM biotin lipoyl attachment domain-containing protein K00382 - 1.8.1.4 5.505e-218 702.0
BYD3_k127_8896310_140 LysE type translocator - - - 0.0000002445 60.0
BYD3_k127_8896310_142 Membrane - - - 0.00001669 57.0
BYD3_k127_8896310_143 Recombinase zinc beta ribbon domain - - - 0.0001651 44.0
BYD3_k127_8896310_15 SMART Nucleotide binding protein, PINc K07175 - - 7.906e-218 685.0
BYD3_k127_8896310_16 Beta-eliminating lyase K01667 - 4.1.99.1 4.961e-208 654.0
BYD3_k127_8896310_17 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 9.642e-206 646.0
BYD3_k127_8896310_18 serine threonine protein kinase K12132 - 2.7.11.1 1.574e-201 660.0
BYD3_k127_8896310_19 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 572.0
BYD3_k127_8896310_2 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1281.0
BYD3_k127_8896310_20 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007217 563.0
BYD3_k127_8896310_21 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 545.0
BYD3_k127_8896310_22 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 538.0
BYD3_k127_8896310_23 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 - 2.3.1.29,2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 532.0
BYD3_k127_8896310_24 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048500,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1990904 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008863 526.0
BYD3_k127_8896310_25 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005088 524.0
BYD3_k127_8896310_26 PFAM Type II secretion system protein E - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000344 503.0
BYD3_k127_8896310_27 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 512.0
BYD3_k127_8896310_28 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 499.0
BYD3_k127_8896310_29 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007852 496.0
BYD3_k127_8896310_3 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1266.0
BYD3_k127_8896310_30 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0001073,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004177,GO:0005488,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006351,GO:0006355,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009056,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042150,GO:0043170,GO:0043171,GO:0043244,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 483.0
BYD3_k127_8896310_31 PFAM transglutaminase domain protein K22452 - 2.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 492.0
BYD3_k127_8896310_32 signal peptide peptidase K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 485.0
BYD3_k127_8896310_33 COG5598 Trimethylamine corrinoid methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 477.0
BYD3_k127_8896310_34 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 461.0
BYD3_k127_8896310_35 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 462.0
BYD3_k127_8896310_36 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 464.0
BYD3_k127_8896310_37 AIR synthase related protein, C-terminal K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 445.0
BYD3_k127_8896310_38 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 441.0
BYD3_k127_8896310_39 Protein of unknown function (DUF1298) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005475 445.0
BYD3_k127_8896310_4 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1177.0
BYD3_k127_8896310_40 Fructose-bisphosphate aldolase class-I K01623 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 436.0
BYD3_k127_8896310_41 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 445.0
BYD3_k127_8896310_42 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 445.0
BYD3_k127_8896310_43 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 441.0
BYD3_k127_8896310_44 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 438.0
BYD3_k127_8896310_45 Major facilitator superfamily K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 447.0
BYD3_k127_8896310_46 Including yeast histone deacetylase and acetoin utilization protein K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 400.0
BYD3_k127_8896310_47 N-acetylmuramoyl-L-alanine amidase K01448 GO:0000003,GO:0000910,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0008745,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019954,GO:0022402,GO:0022414,GO:0030288,GO:0030313,GO:0031975,GO:0032505,GO:0042597,GO:0043093,GO:0044464,GO:0051301,GO:0061783 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005376 400.0
BYD3_k127_8896310_48 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 383.0
BYD3_k127_8896310_49 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 394.0
BYD3_k127_8896310_5 HsdM N-terminal domain K03427 - 2.1.1.72 3.923e-302 930.0
BYD3_k127_8896310_50 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 394.0
BYD3_k127_8896310_51 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 368.0
BYD3_k127_8896310_52 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 374.0
BYD3_k127_8896310_53 FeS assembly ATPase SufC K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 361.0
BYD3_k127_8896310_54 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 345.0
BYD3_k127_8896310_55 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 351.0
BYD3_k127_8896310_56 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 348.0
BYD3_k127_8896310_57 PFAM ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 344.0
BYD3_k127_8896310_58 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 349.0
BYD3_k127_8896310_59 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 335.0
BYD3_k127_8896310_6 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 5.203e-294 914.0
BYD3_k127_8896310_60 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 327.0
BYD3_k127_8896310_61 taurine catabolism dioxygenase K00471 - 1.14.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 321.0
BYD3_k127_8896310_62 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007781 303.0
BYD3_k127_8896310_63 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 306.0
BYD3_k127_8896310_64 Belongs to the RNA methyltransferase TrmD family K00554 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 292.0
BYD3_k127_8896310_65 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 295.0
BYD3_k127_8896310_66 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001495 303.0
BYD3_k127_8896310_67 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003147 284.0
BYD3_k127_8896310_68 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008263 279.0
BYD3_k127_8896310_69 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001218 286.0
BYD3_k127_8896310_7 ABC transporter - - - 1.426e-285 886.0
BYD3_k127_8896310_70 phosphatase K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006661 289.0
BYD3_k127_8896310_71 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004833 297.0
BYD3_k127_8896310_72 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000001015 267.0
BYD3_k127_8896310_73 Phosphohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001597 275.0
BYD3_k127_8896310_74 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 GO:0000287,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0031123,GO:0034470,GO:0034641,GO:0034660,GO:0042780,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000008105 273.0
BYD3_k127_8896310_75 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000009457 264.0
BYD3_k127_8896310_76 FeS assembly SUF system protein SufT - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001443 263.0
BYD3_k127_8896310_77 COG1428 Deoxynucleoside kinases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000267 258.0
BYD3_k127_8896310_78 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006353 264.0
BYD3_k127_8896310_79 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000005637 246.0
BYD3_k127_8896310_8 dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes - - - 3.634e-267 837.0
BYD3_k127_8896310_80 ADP-glyceromanno-heptose 6-epimerase activity K01710,K01784 - 4.2.1.46,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000001052 259.0
BYD3_k127_8896310_81 Belongs to the WrbA family K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000001335 239.0
BYD3_k127_8896310_82 assembly protein SufD K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000001743 252.0
BYD3_k127_8896310_83 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000002315 253.0
BYD3_k127_8896310_84 permease K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000001619 235.0
BYD3_k127_8896310_85 (FHA) domain - - - 0.00000000000000000000000000000000000000000000000000000000000002146 222.0
BYD3_k127_8896310_86 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000002117 229.0
BYD3_k127_8896310_87 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000122 215.0
BYD3_k127_8896310_88 CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000001076 223.0
BYD3_k127_8896310_89 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000002765 213.0
BYD3_k127_8896310_9 TIGRFAM FeS assembly protein SufB K09014 - - 4.253e-267 828.0
BYD3_k127_8896310_90 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000002267 204.0
BYD3_k127_8896310_91 PFAM acid phosphatase (Class B) - - - 0.0000000000000000000000000000000000000000000000000000001913 205.0
BYD3_k127_8896310_92 Permease YjgP YjgQ K11720 - - 0.0000000000000000000000000000000000000000000000000000008215 216.0
BYD3_k127_8896310_93 MlaA lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000001545 205.0
BYD3_k127_8896310_94 PFAM Amino acid-binding ACT K03567 - - 0.00000000000000000000000000000000000000000000000000000186 199.0
BYD3_k127_8896310_95 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.00000000000000000000000000000000000000000000000000001036 209.0
BYD3_k127_8896310_96 Glucose-regulated metallo-peptidase M90 K09933 - - 0.00000000000000000000000000000000000000000000000000002027 215.0
BYD3_k127_8896310_97 type i restriction K01154 - 3.1.21.3 0.000000000000000000000000000000000000000000000000001011 199.0
BYD3_k127_8896310_98 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000000000472 180.0
BYD3_k127_8896310_99 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000002274 182.0
BYD3_k127_8964087_0 modulator of DNA gyrase K03568 - - 1.29e-213 684.0
BYD3_k127_8964087_1 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 522.0
BYD3_k127_8964087_10 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 330.0
BYD3_k127_8964087_11 Type II secretory pathway component ExeA K02450,K12283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 322.0
BYD3_k127_8964087_12 Protein of unknown function - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 343.0
BYD3_k127_8964087_13 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007373 285.0
BYD3_k127_8964087_14 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003406 280.0
BYD3_k127_8964087_15 dna polymerase III delta subunit K02340 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000008641 271.0
BYD3_k127_8964087_16 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000007345 231.0
BYD3_k127_8964087_17 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.0000000000000000000000000000000000000000000000000000000000000002535 228.0
BYD3_k127_8964087_18 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000006808 214.0
BYD3_k127_8964087_19 Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host K05801 - - 0.000000000000000000000000000000000000000000000000000001128 203.0
BYD3_k127_8964087_2 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 428.0
BYD3_k127_8964087_20 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000000000000000000005596 198.0
BYD3_k127_8964087_21 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000005508 190.0
BYD3_k127_8964087_22 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000001314 181.0
BYD3_k127_8964087_23 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000001626 161.0
BYD3_k127_8964087_24 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000001519 137.0
BYD3_k127_8964087_25 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000009013 135.0
BYD3_k127_8964087_26 Belongs to the UPF0307 family K09889 - - 0.0000000000000000000009083 101.0
BYD3_k127_8964087_3 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 422.0
BYD3_k127_8964087_4 SAICAR synthetase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 414.0
BYD3_k127_8964087_5 cytochrome C peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 408.0
BYD3_k127_8964087_6 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 392.0
BYD3_k127_8964087_7 ABC transporter substrate-binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 382.0
BYD3_k127_8964087_8 ribonuclease BN K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006989 344.0
BYD3_k127_8964087_9 Carbon-nitrogen hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 320.0
BYD3_k127_8971355_0 Protein of unknown function (DUF3604) - - - 2.054e-307 953.0
BYD3_k127_8971355_1 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 374.0
BYD3_k127_8971355_2 PPIC-type PPIASE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002259 239.0
BYD3_k127_8971355_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000003669 222.0
BYD3_k127_8971355_4 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000004735 198.0