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Overview

ID MAG00127
Name BYD3_bin.4
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Chitinophagales
Family Chitinophagaceae
Genus VBAS01
Species VBAS01 sp036374555
Assembly information
Completeness (%) 88.34
Contamination (%) 1.34
GC content (%) 39.0
N50 (bp) 18,045
Genome size (bp) 4,627,829

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3919

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1002710_0 Winged helix DNA-binding domain - - - 0.000000000000000002269 84.0
BYD3_k127_1002710_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000001899 87.0
BYD3_k127_1002710_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000486 79.0
BYD3_k127_100483_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 2.379e-221 690.0
BYD3_k127_100483_1 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 605.0
BYD3_k127_100483_2 Protein of unknown function (DUF1624) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 405.0
BYD3_k127_100483_3 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.000000000000000000000000000000000000000000000000000572 186.0
BYD3_k127_100483_4 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.000001229 52.0
BYD3_k127_1006309_0 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 553.0
BYD3_k127_1006309_1 COGs COG0076 Glutamate decarboxylase and related PLP-dependent protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005138 527.0
BYD3_k127_1006309_2 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 410.0
BYD3_k127_1006309_3 Response regulator of the LytR AlgR family K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000008497 229.0
BYD3_k127_1006309_4 peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000009748 213.0
BYD3_k127_1006309_5 Cupin domain - - - 0.0000000000000000000000000000000000000000000000004113 177.0
BYD3_k127_1006309_6 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000009761 181.0
BYD3_k127_1006309_7 Ketosteroid isomerase-related protein - - - 0.00000000000000000000000000000009827 129.0
BYD3_k127_1006309_8 cheY-homologous receiver domain - - - 0.0000000003702 67.0
BYD3_k127_10110_0 alkaline phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 587.0
BYD3_k127_10110_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 376.0
BYD3_k127_10110_2 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 293.0
BYD3_k127_10110_3 Domain of unknown function (DUF3472) - - - 0.000000000000000000000000000000000000000000000008526 184.0
BYD3_k127_10110_4 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000000000000000000000244 107.0
BYD3_k127_1036030_0 Molybdenum cofactor biosynthesis protein K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 420.0
BYD3_k127_1036030_1 PFAM ABC transporter related K06147 - - 0.000000000000000000000000000000000000000001662 159.0
BYD3_k127_1036030_2 Psort location OuterMembrane, score - - - 0.0000336 55.0
BYD3_k127_1038511_0 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 602.0
BYD3_k127_1038511_1 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 520.0
BYD3_k127_1038511_10 - - - - 0.000000000000000000000000006942 116.0
BYD3_k127_1038511_11 Belongs to the glycosyl hydrolase 43 family - - - 0.0000000000000000000000002911 106.0
BYD3_k127_1038511_12 Transposase IS200 like - - - 0.0000000000000000477 81.0
BYD3_k127_1038511_13 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000644 88.0
BYD3_k127_1038511_14 Transposase IS200 like - - - 0.00000000006435 64.0
BYD3_k127_1038511_2 Phospholipase, patatin family K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 435.0
BYD3_k127_1038511_3 DNA-damage-inducible protein D K14623 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008121 419.0
BYD3_k127_1038511_4 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006184 329.0
BYD3_k127_1038511_5 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000001553 201.0
BYD3_k127_1038511_6 - - - - 0.000000000000000000000000000000000000001806 152.0
BYD3_k127_1038511_7 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000014 150.0
BYD3_k127_1038511_8 - - - - 0.0000000000000000000000000000000000003544 143.0
BYD3_k127_1038511_9 Transposase IS200 like - - - 0.0000000000000000000000000007894 114.0
BYD3_k127_1053994_0 Belongs to the helicase family. UvrD subfamily K03657 - 3.6.4.12 6.461e-308 954.0
BYD3_k127_1053994_1 photosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 347.0
BYD3_k127_1053994_10 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00000009685 55.0
BYD3_k127_1053994_11 Type I restriction-modification system methyltransferase subunit - - - 0.000001657 51.0
BYD3_k127_1053994_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 304.0
BYD3_k127_1053994_3 DinB family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007459 271.0
BYD3_k127_1053994_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002125 241.0
BYD3_k127_1053994_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000001158 203.0
BYD3_k127_1053994_6 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000001662 217.0
BYD3_k127_1053994_7 - K01992 - - 0.000000000000000000000000000000000000001542 161.0
BYD3_k127_1053994_8 cheY-homologous receiver domain - - - 0.000000000000000000000000000004194 123.0
BYD3_k127_1053994_9 - - - - 0.000000000000000000000000002344 121.0
BYD3_k127_1064039_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01751,K01754,K06016,K17989,K21400 GO:0000287,GO:0003674,GO:0003824,GO:0003941,GO:0004793,GO:0004794,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006082,GO:0006090,GO:0006464,GO:0006520,GO:0006549,GO:0006563,GO:0006565,GO:0006566,GO:0006567,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008838,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009070,GO:0009071,GO:0009081,GO:0009082,GO:0009097,GO:0009987,GO:0016020,GO:0016053,GO:0016054,GO:0016597,GO:0016829,GO:0016830,GO:0016832,GO:0016840,GO:0016841,GO:0016853,GO:0016854,GO:0016855,GO:0017144,GO:0018249,GO:0019538,GO:0019752,GO:0019842,GO:0030170,GO:0030378,GO:0030848,GO:0031406,GO:0032787,GO:0036094,GO:0036211,GO:0036361,GO:0042219,GO:0042802,GO:0042803,GO:0042866,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0046416,GO:0046437,GO:0046872,GO:0046983,GO:0047661,GO:0048037,GO:0050662,GO:0070178,GO:0070179,GO:0070279,GO:0071704,GO:0071944,GO:0072330,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.3.1.263,3.5.1.6,3.5.1.87,4.3.1.15,4.3.1.17,4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 310.0
BYD3_k127_1064039_1 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000118 156.0
BYD3_k127_1074549_0 Bacterial membrane protein YfhO - - - 2.063e-219 708.0
BYD3_k127_1074549_1 phosphorylase K00757 - 2.4.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 426.0
BYD3_k127_1074549_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 380.0
BYD3_k127_1074549_3 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 316.0
BYD3_k127_1074549_4 Hep Hag repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004102 287.0
BYD3_k127_1074549_5 pfam nudix - - - 0.000000000000000000000000000000000000000000000000000000000000000006063 228.0
BYD3_k127_1074549_6 PFAM Glycosyl transferase family 2 K20444 - - 0.0000000000000000000000000000000000000000000000000000000007311 211.0
BYD3_k127_1074549_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.0000000000000000000000000000000000000000000000000002559 201.0
BYD3_k127_1074549_8 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.00000000000000000000000000000000005341 148.0
BYD3_k127_1074549_9 transferase activity, transferring glycosyl groups - - - 0.0000000001654 67.0
BYD3_k127_1102714_0 Por secretion system C-terminal sorting domain-containing protein - - - 1.476e-227 728.0
BYD3_k127_1102714_1 PFAM Aldehyde dehydrogenase K13877 - 1.2.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009166 309.0
BYD3_k127_1102714_2 Belongs to the proline racemase family K12658 - 5.1.1.8 0.000000000000000000000000000000000000000000000000000000000000000113 224.0
BYD3_k127_1109764_0 Sortilin, neurotensin receptor 3, - - - 0.0 1395.0
BYD3_k127_1109764_1 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 0.0 1069.0
BYD3_k127_1109764_10 methionine sulfoxide reductase K07305,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 288.0
BYD3_k127_1109764_11 PFAM HhH-GPD superfamily base excision DNA repair protein K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001305 276.0
BYD3_k127_1109764_12 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003848 274.0
BYD3_k127_1109764_13 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004814 271.0
BYD3_k127_1109764_14 gliding motility-associated lipoprotein GldK - - - 0.000000000000000000000000000000000000000000003472 174.0
BYD3_k127_1109764_15 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000002089 128.0
BYD3_k127_1109764_16 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000009078 107.0
BYD3_k127_1109764_17 Hydroxymethylglutaryl-coenzyme A reductase K00054 - 1.1.1.88 0.000000000000001411 82.0
BYD3_k127_1109764_2 Peptidase M16 K07263 - - 0.0 1066.0
BYD3_k127_1109764_3 PFAM GH3 auxin-responsive promoter - - - 4.341e-279 863.0
BYD3_k127_1109764_4 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006174 561.0
BYD3_k127_1109764_5 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 517.0
BYD3_k127_1109764_6 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 491.0
BYD3_k127_1109764_7 ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 428.0
BYD3_k127_1109764_8 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 399.0
BYD3_k127_1109764_9 COG1024 Enoyl-CoA hydratase carnithine racemase K13766 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005993 348.0
BYD3_k127_1113508_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 458.0
BYD3_k127_1113508_1 PFAM Chloroplast import component protein (Tic20) - - - 0.00000000000000000000000000000002614 130.0
BYD3_k127_1126756_0 Sortilin, neurotensin receptor 3, - - - 0.0 1448.0
BYD3_k127_1126756_1 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001832 267.0
BYD3_k127_1126756_2 Immunoglobulin-like domain of bacterial spore germination - - - 0.000000000000000000000000000000000000000000002064 169.0
BYD3_k127_1150258_0 PFAM Peptidase M16 inactive domain K07263 - - 0.0 1341.0
BYD3_k127_1150258_1 metallophosphoesterase - - - 0.0 1311.0
BYD3_k127_1150258_10 Acid phosphatase homologues K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000001345 168.0
BYD3_k127_1150258_11 SdiA-regulated - - - 0.0000000000000000000000000000000000000003256 160.0
BYD3_k127_1150258_2 TonB-dependent receptor - - - 0.0 1116.0
BYD3_k127_1150258_3 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.0 1061.0
BYD3_k127_1150258_4 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007629 444.0
BYD3_k127_1150258_5 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 334.0
BYD3_k127_1150258_6 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 322.0
BYD3_k127_1150258_7 Fe2 -dicitrate sensor, membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000001557 233.0
BYD3_k127_1150258_8 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000005557 193.0
BYD3_k127_1150258_9 sigma70 factor K03088 - - 0.0000000000000000000000000000000000000000001198 165.0
BYD3_k127_1194190_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.157e-301 929.0
BYD3_k127_1194190_1 Carboxypeptidase regulatory-like domain - - - 7.636e-273 860.0
BYD3_k127_1194190_10 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000001925 128.0
BYD3_k127_1194190_11 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000009818 94.0
BYD3_k127_1194190_2 ABC transporter K18890 - - 2.345e-257 806.0
BYD3_k127_1194190_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 419.0
BYD3_k127_1194190_4 Beta-lactamase superfamily domain K06136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 353.0
BYD3_k127_1194190_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000002535 219.0
BYD3_k127_1194190_6 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000000001861 189.0
BYD3_k127_1194190_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000001916 181.0
BYD3_k127_1194190_9 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000009122 154.0
BYD3_k127_1199087_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 298.0
BYD3_k127_1199087_1 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002652 276.0
BYD3_k127_1199087_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009157 252.0
BYD3_k127_1199087_3 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002306 226.0
BYD3_k127_1199087_4 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000000000000000001616 117.0
BYD3_k127_1199087_5 - - - - 0.000000000000000000000346 109.0
BYD3_k127_1224825_0 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 488.0
BYD3_k127_1224825_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.000000000000000000008288 91.0
BYD3_k127_1229688_0 Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 - 1.3.99.16 0.0 1102.0
BYD3_k127_1229688_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 580.0
BYD3_k127_1229688_2 Na H antiporter K03316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005934 509.0
BYD3_k127_1229688_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008882 323.0
BYD3_k127_1229688_4 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002663 273.0
BYD3_k127_1229688_5 - - - - 0.000000000000000000000000000000000000000000000000000001984 196.0
BYD3_k127_1229688_6 - - - - 0.00000000000000000000000000000000000000000000000000001093 192.0
BYD3_k127_1309246_0 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 397.0
BYD3_k127_1309246_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001781 269.0
BYD3_k127_1309246_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008958 264.0
BYD3_k127_1309246_3 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000001355 256.0
BYD3_k127_1309246_4 Cyclic nucleotide-monophosphate binding domain K03301 - - 0.0000000000000000000000000000000000000000000000000000006155 220.0
BYD3_k127_1309246_5 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000006288 198.0
BYD3_k127_1309246_6 Cyclic nucleotide-monophosphate binding domain K03301 - - 0.00000000000000000000000000000000000000007279 155.0
BYD3_k127_1310810_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006534 319.0
BYD3_k127_1310810_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 317.0
BYD3_k127_1310810_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000017 295.0
BYD3_k127_1310810_3 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000319 295.0
BYD3_k127_1310810_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000191 256.0
BYD3_k127_1310810_5 Pkd domain containing protein - - - 0.00000000000000000000000000000003164 145.0
BYD3_k127_1321468_0 Peptidase family C25 - - - 0.0 1650.0
BYD3_k127_1321468_1 heat shock protein 70 K04043,K04044 - - 6.983e-293 909.0
BYD3_k127_1321468_10 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000001938 193.0
BYD3_k127_1321468_11 PFAM Sigma 54 modulation protein S30EA ribosomal protein K05808 - - 0.00000000000000000000000000000000000001047 147.0
BYD3_k127_1321468_12 - - - - 0.0000000000000000000000000000000000004094 159.0
BYD3_k127_1321468_13 - - - - 0.0000000000000000000000000000171 135.0
BYD3_k127_1321468_14 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000000521 111.0
BYD3_k127_1321468_16 - - - - 0.0000003626 54.0
BYD3_k127_1321468_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 1.478e-241 748.0
BYD3_k127_1321468_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 4.032e-200 631.0
BYD3_k127_1321468_4 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 565.0
BYD3_k127_1321468_5 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 368.0
BYD3_k127_1321468_6 Pfam Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006384 319.0
BYD3_k127_1321468_7 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 295.0
BYD3_k127_1321468_8 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000708 282.0
BYD3_k127_1321468_9 AdoMet dependent proline di-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000004238 242.0
BYD3_k127_1321995_0 TonB-dependent receptor - - - 0.0 1139.0
BYD3_k127_1321995_1 Multicopper oxidase - - - 1.912e-198 626.0
BYD3_k127_1321995_10 Protein of unknown function (DUF3347) - - - 0.0000000000007519 73.0
BYD3_k127_1321995_2 Heavy-metal-associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 375.0
BYD3_k127_1321995_3 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 364.0
BYD3_k127_1321995_4 Protein of unknown function (DUF3347) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 348.0
BYD3_k127_1321995_5 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000004718 204.0
BYD3_k127_1321995_6 Heavy metal translocating P-type atpase - - - 0.0000000000000000000000000000000000000000001298 164.0
BYD3_k127_1321995_7 - - - - 0.000000000000000000000000000000002711 134.0
BYD3_k127_1321995_8 - - - - 0.000000000000000000000000000000002942 132.0
BYD3_k127_1321995_9 - - - - 0.0000000000000000000421 95.0
BYD3_k127_1322047_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 594.0
BYD3_k127_1322047_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003796 531.0
BYD3_k127_1322047_2 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000006579 217.0
BYD3_k127_1326784_0 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 453.0
BYD3_k127_1326784_1 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001056 258.0
BYD3_k127_1326784_2 transcription regulator containing HTH domain - - - 0.000000000000000000000000000000000000000000001384 167.0
BYD3_k127_1326784_3 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000003625 155.0
BYD3_k127_1326784_4 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system K19166 - - 0.000000000000000000000000000189 117.0
BYD3_k127_13451_0 SNF2 family N-terminal domain K08282 - 2.7.11.1 0.0 1456.0
BYD3_k127_13451_1 Asparaginyl-tRNA synthetase K01893 - 6.1.1.22 4.37e-271 838.0
BYD3_k127_13451_10 Amidinotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 297.0
BYD3_k127_13451_11 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 295.0
BYD3_k127_13451_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000009822 218.0
BYD3_k127_13451_13 Transcriptional regulator K10947 - - 0.0000000000000000000000000000000000000000000000000000000002361 203.0
BYD3_k127_13451_14 Cell division protein - - - 0.000000000000000000000000000000000000000000000000004759 185.0
BYD3_k127_13451_15 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000000000000000000000889 180.0
BYD3_k127_13451_16 DinB superfamily - - - 0.00000000000000000000000000000000000000000006932 166.0
BYD3_k127_13451_17 Pfam Biopolymer transport protein ExbD TolR - - - 0.000000000000000000000000000000000000008752 151.0
BYD3_k127_13451_18 PFAM Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000001352 139.0
BYD3_k127_13451_19 - - - - 0.00000000002101 77.0
BYD3_k127_13451_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 5.125e-257 802.0
BYD3_k127_13451_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 2.265e-205 644.0
BYD3_k127_13451_4 Peptidase, M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 553.0
BYD3_k127_13451_5 PFAM PspC domain K03973 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 563.0
BYD3_k127_13451_6 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 476.0
BYD3_k127_13451_7 Rhodanese Homology Domain K06917 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004707 384.0
BYD3_k127_13451_8 Belongs to the ComB family K05979 - 3.1.3.71 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 361.0
BYD3_k127_13451_9 Protein of unknown function (DUF3089) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004753 343.0
BYD3_k127_135733_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.429e-290 907.0
BYD3_k127_135733_1 Outer membrane protein beta-barrel family - - - 6.284e-277 876.0
BYD3_k127_135733_10 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009851 456.0
BYD3_k127_135733_11 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 452.0
BYD3_k127_135733_12 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 456.0
BYD3_k127_135733_13 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007007 436.0
BYD3_k127_135733_14 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 416.0
BYD3_k127_135733_15 3-carboxymuconate cyclase K07404 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 411.0
BYD3_k127_135733_16 Belongs to the UPF0176 family K07146 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 367.0
BYD3_k127_135733_17 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007013 349.0
BYD3_k127_135733_18 Domain of unknown function (DUF4270) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 328.0
BYD3_k127_135733_19 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 308.0
BYD3_k127_135733_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 5.948e-274 861.0
BYD3_k127_135733_20 ATPases associated with a variety of cellular activities K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 291.0
BYD3_k127_135733_21 SPTR NmrA family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 291.0
BYD3_k127_135733_22 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001436 285.0
BYD3_k127_135733_23 Belongs to the UPF0754 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001579 279.0
BYD3_k127_135733_24 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001737 286.0
BYD3_k127_135733_25 BlaR1 peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002931 297.0
BYD3_k127_135733_26 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006482 269.0
BYD3_k127_135733_27 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000002192 268.0
BYD3_k127_135733_28 Protein of unknown function (DUF1203) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001705 250.0
BYD3_k127_135733_29 - - - - 0.0000000000000000000000000000000000000000000000000000000000003237 219.0
BYD3_k127_135733_3 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 2.174e-272 844.0
BYD3_k127_135733_30 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000000000000000005126 203.0
BYD3_k127_135733_31 Penicillinase repressor - - - 0.0000000000000000000000000000000000000000000000000003042 187.0
BYD3_k127_135733_32 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000001026 177.0
BYD3_k127_135733_33 DinB superfamily - - - 0.000000000000000000000000000000000000000000000006395 177.0
BYD3_k127_135733_34 - - - - 0.00000000000000000000000000000000002132 143.0
BYD3_k127_135733_35 Domain of unknown function (DUF4281) - - - 0.0000000000000000000000000000109 123.0
BYD3_k127_135733_36 energy transducer activity K03832 - - 0.00000000000000000000000000003309 125.0
BYD3_k127_135733_37 - - - - 0.000000000000000000000000001052 124.0
BYD3_k127_135733_38 Transposase - - - 0.00000000000000000000000002958 119.0
BYD3_k127_135733_39 - - - - 0.000000000000000000002524 104.0
BYD3_k127_135733_4 TonB-dependent receptor plug domain K02014 - - 8.606e-269 859.0
BYD3_k127_135733_5 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 606.0
BYD3_k127_135733_6 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 546.0
BYD3_k127_135733_7 Phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 502.0
BYD3_k127_135733_8 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006619 488.0
BYD3_k127_135733_9 PFAM Starch synthase, catalytic domain K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 471.0
BYD3_k127_1376243_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 416.0
BYD3_k127_1376243_1 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 378.0
BYD3_k127_1376243_10 SPTR Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000000000000004315 130.0
BYD3_k127_1376243_11 gliding motility-associated C-terminal domain - - - 0.0000000000000000001788 106.0
BYD3_k127_1376243_12 Mycoplasma protein of unknown function, DUF285 K21449 - - 0.0000000003663 75.0
BYD3_k127_1376243_13 Chondroitinase B K01729 - 4.2.2.3 0.0002345 49.0
BYD3_k127_1376243_2 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 366.0
BYD3_k127_1376243_3 Glucose / Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 331.0
BYD3_k127_1376243_4 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 321.0
BYD3_k127_1376243_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000001648 228.0
BYD3_k127_1376243_6 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family K02503 - - 0.00000000000000000000000000000000000000000000000000000000000000001781 226.0
BYD3_k127_1376243_7 - - - - 0.000000000000000000000000000000000000000000000007094 194.0
BYD3_k127_1376243_8 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000001382 153.0
BYD3_k127_1398470_0 amino acid K03294 - - 5.557e-262 814.0
BYD3_k127_1398470_1 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 415.0
BYD3_k127_1398470_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 329.0
BYD3_k127_1398470_3 PFAM Uncharacterised BCR, COG1649 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 327.0
BYD3_k127_1398470_4 Murein transglycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001094 286.0
BYD3_k127_1398470_5 Protein of unknown function, DUF393 - - - 0.0000000000000000000000000000000000000000000000001172 179.0
BYD3_k127_1398470_6 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000009987 142.0
BYD3_k127_14460_0 Saccharopine dehydrogenase K00290,K00293 - 1.5.1.10,1.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004868 577.0
BYD3_k127_14460_1 ARD/ARD' family - - - 0.00000000000000000000005354 102.0
BYD3_k127_1457645_0 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 1.685e-258 807.0
BYD3_k127_1457645_1 OmpA MotB domain protein K03286 - - 3.764e-194 622.0
BYD3_k127_1457645_10 PFAM Endonuclease Exonuclease phosphatase K07004 - - 0.0000000000000000000000000000000000000000000000000000000000001317 232.0
BYD3_k127_1457645_11 RNA polymerase - - - 0.00000000000000000000000000000000000000000000000000004186 188.0
BYD3_k127_1457645_12 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000006657 185.0
BYD3_k127_1457645_13 Domain of unknown function (DUF4296) - - - 0.00000000000001639 78.0
BYD3_k127_1457645_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 532.0
BYD3_k127_1457645_3 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 438.0
BYD3_k127_1457645_4 PFAM Coenzyme A transferase K01027,K01028,K01031,K01034 - 2.8.3.5,2.8.3.6,2.8.3.8,2.8.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 402.0
BYD3_k127_1457645_5 PFAM Coenzyme A transferase K01029,K01032 - 2.8.3.5,2.8.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 393.0
BYD3_k127_1457645_6 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 357.0
BYD3_k127_1457645_7 Domain of unknown function (DUF4835) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 358.0
BYD3_k127_1457645_8 outer membrane assembly lipoprotein YfiO K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 324.0
BYD3_k127_1457645_9 Lamin Tail Domain K07004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000292 263.0
BYD3_k127_14608_0 Ribosomal protein S1 K02945 - - 0.0 1077.0
BYD3_k127_14608_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 4.525e-209 658.0
BYD3_k127_14608_10 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 300.0
BYD3_k127_14608_11 PFAM thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 282.0
BYD3_k127_14608_12 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000003379 239.0
BYD3_k127_14608_13 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000007252 231.0
BYD3_k127_14608_14 PFAM Pentapeptide repeats (8 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000181 234.0
BYD3_k127_14608_15 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000002331 226.0
BYD3_k127_14608_16 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000005736 181.0
BYD3_k127_14608_17 PFAM Phospholipid glycerol acyltransferase - - - 0.00000000000000000000000000000000000000000000000006541 190.0
BYD3_k127_14608_18 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000001459 159.0
BYD3_k127_14608_19 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000002229 160.0
BYD3_k127_14608_2 HI0933 family K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 598.0
BYD3_k127_14608_20 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000004279 161.0
BYD3_k127_14608_21 6-phosphogluconolactonase activity - - - 0.0000000000000000000000000000000000000000006001 182.0
BYD3_k127_14608_22 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000007523 154.0
BYD3_k127_14608_23 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000001029 139.0
BYD3_k127_14608_24 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000000000000000000007247 145.0
BYD3_k127_14608_25 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000005834 153.0
BYD3_k127_14608_26 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000003912 109.0
BYD3_k127_14608_27 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000001076 102.0
BYD3_k127_14608_28 antibiotic catabolic process - - - 0.0000000000000000002615 104.0
BYD3_k127_14608_29 nuclear chromosome segregation K18376 - - 0.00000000008895 74.0
BYD3_k127_14608_3 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 567.0
BYD3_k127_14608_30 Photosynthesis system II assembly factor YCF48 - - - 0.00000000215 72.0
BYD3_k127_14608_31 protein related to plant photosystem II stability assembly factor - - - 0.0002268 55.0
BYD3_k127_14608_4 Methionine aminopeptidase K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 434.0
BYD3_k127_14608_5 Acyl-transferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 399.0
BYD3_k127_14608_6 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005939 434.0
BYD3_k127_14608_7 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 326.0
BYD3_k127_14608_8 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 310.0
BYD3_k127_14608_9 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 338.0
BYD3_k127_1468500_0 Penicillin-binding protein 2 K05515 - 3.4.16.4 1.817e-317 985.0
BYD3_k127_1468500_1 POT family K03305 - - 1.421e-220 696.0
BYD3_k127_1468500_10 Metallo-beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 351.0
BYD3_k127_1468500_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 321.0
BYD3_k127_1468500_12 COGs COG1392 Phosphate transport regulator (distant homolog of PhoU) K07220 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 324.0
BYD3_k127_1468500_13 shape-determining protein MreC K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002554 276.0
BYD3_k127_1468500_14 rod shape-determining protein MreD - - - 0.00000000000000000000000000000000000000000000000000000000000001356 219.0
BYD3_k127_1468500_15 phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000008542 188.0
BYD3_k127_1468500_16 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000004554 182.0
BYD3_k127_1468500_17 S23 ribosomal protein - - - 0.0000000000000000000000000000000000000001653 153.0
BYD3_k127_1468500_18 - - - - 0.000000000000000000000006492 111.0
BYD3_k127_1468500_19 Amino acid transporter K03305 - - 0.00000000000000000002149 90.0
BYD3_k127_1468500_2 Cell shape determining protein MreB Mrl K03569 - - 1.974e-212 661.0
BYD3_k127_1468500_3 Belongs to the GARS family K01945 - 6.3.4.13 1.766e-198 625.0
BYD3_k127_1468500_4 Belongs to the SEDS family K05837 - - 2.071e-194 615.0
BYD3_k127_1468500_5 PFAM NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 589.0
BYD3_k127_1468500_6 Transketolase K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 556.0
BYD3_k127_1468500_7 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 466.0
BYD3_k127_1468500_8 MFS_1 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006404 454.0
BYD3_k127_1468500_9 phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 445.0
BYD3_k127_1494264_0 hydrolase, family 3 - - - 0.0 1137.0
BYD3_k127_1494264_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 3.282e-275 858.0
BYD3_k127_1494264_2 PFAM PSP1 C-terminal conserved region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 611.0
BYD3_k127_1494264_3 COG2812 DNA polymerase III, gamma tau subunits K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 475.0
BYD3_k127_1494264_4 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001729 265.0
BYD3_k127_1494264_5 Putative esterase K07017 - - 0.0000000000000000000000000009212 122.0
BYD3_k127_1494264_6 TonB-dependent receptor - - - 0.000000000001654 78.0
BYD3_k127_149910_0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K21310 - 2.1.1.334 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 311.0
BYD3_k127_149910_1 TIGRFAM Nicotinamide mononucleotide transporter PnuC K03811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005269 291.0
BYD3_k127_149910_2 DNA-3-methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 285.0
BYD3_k127_149910_3 ATPase kinase involved in NAD metabolism - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003367 271.0
BYD3_k127_149910_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000003332 253.0
BYD3_k127_149910_5 redox protein regulator of disulfide bond formation - - - 0.00000000000000000000000000000000000000000000000000004341 194.0
BYD3_k127_149910_6 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.000000000000000000000000000006919 121.0
BYD3_k127_1503804_0 PFAM Alkyl hydroperoxide reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 539.0
BYD3_k127_1503804_1 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005076 250.0
BYD3_k127_1503804_2 Transposase IS200 like - - - 0.00000000000000000000000000000000000000000005593 162.0
BYD3_k127_1503804_3 Transposase IS200 like - - - 0.00000000000002827 73.0
BYD3_k127_1503804_4 - - - - 0.00000000000006698 75.0
BYD3_k127_1512166_0 SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000001914 224.0
BYD3_k127_1512166_1 NlpC/P60 family - - - 0.0000000000000000000000000000000000000000000000003153 183.0
BYD3_k127_1512166_2 ketosteroid isomerase - - - 0.0000000000000000000000000000000000000000000004654 171.0
BYD3_k127_1512166_3 - - - - 0.0000000000000000000008003 100.0
BYD3_k127_1512166_4 - - - - 0.000000938 57.0
BYD3_k127_1561298_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 3.051e-301 945.0
BYD3_k127_1561298_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 4.227e-282 871.0
BYD3_k127_1561298_10 Amidohydrolase K07046 - - 0.0000000000000000000000000000000000000000000000000000000000000000002984 232.0
BYD3_k127_1561298_11 PFAM Rhamnose mutarotase K03534 - 5.1.3.32 0.00000000000000000000000000000000000000000000008842 171.0
BYD3_k127_1561298_12 S23 ribosomal protein - - - 0.0000000000000000000000000000000000000000009229 159.0
BYD3_k127_1561298_13 - - - - 0.0000000000000000000000000000000000004149 159.0
BYD3_k127_1561298_14 TIGRFAM Gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.000000000000000000000000005345 111.0
BYD3_k127_1561298_15 PA14 K19360 - - 0.0000000000000000000000005561 122.0
BYD3_k127_1561298_2 PRINTS Glycosyl hydrolase family 29 signature K01206 - 3.2.1.51 5.124e-225 703.0
BYD3_k127_1561298_3 Pfam Alpha-L-fucosidase K01206 - 3.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 571.0
BYD3_k127_1561298_4 PFAM Major Facilitator Superfamily K02429 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 512.0
BYD3_k127_1561298_5 transport system involved in gliding motility, auxiliary component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 483.0
BYD3_k127_1561298_6 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009507 439.0
BYD3_k127_1561298_7 Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006245 437.0
BYD3_k127_1561298_8 short-chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 383.0
BYD3_k127_1561298_9 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001493 280.0
BYD3_k127_158685_0 PFAM TonB-dependent Receptor Plug Domain - - - 0.0 1234.0
BYD3_k127_158685_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0 1045.0
BYD3_k127_158685_10 membrane transporter protein K07090 - - 0.0000000000000000000000000000001629 128.0
BYD3_k127_158685_11 DoxX family - - - 0.0000000000000000000000000000232 122.0
BYD3_k127_158685_12 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000000000000001066 116.0
BYD3_k127_158685_15 Sialate O-acetylesterase K05970 - 3.1.1.53 0.00000000000000004227 84.0
BYD3_k127_158685_17 Cytochrome c - - - 0.0002177 44.0
BYD3_k127_158685_2 Phosphate starvation-inducible protein PhoH K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 588.0
BYD3_k127_158685_3 major facilitator superfamily K08151 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 579.0
BYD3_k127_158685_4 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007572 272.0
BYD3_k127_158685_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008401 261.0
BYD3_k127_158685_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008979 250.0
BYD3_k127_158685_7 PFAM Transglycosylase SLT domain K08307 - - 0.0000000000000000000000000000000000000000000000000000007338 203.0
BYD3_k127_158685_8 - - - - 0.00000000000000000000000000000000000000000000000000873 187.0
BYD3_k127_158685_9 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000005627 133.0
BYD3_k127_1660350_0 CarboxypepD_reg-like domain - - - 0.0 1223.0
BYD3_k127_1660350_1 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 0.0 1014.0
BYD3_k127_1660350_10 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000007536 191.0
BYD3_k127_1660350_11 - - - - 0.0000000000000000000000000006179 123.0
BYD3_k127_1660350_12 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000002862 117.0
BYD3_k127_1660350_2 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 554.0
BYD3_k127_1660350_3 nucleotide phosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000924 512.0
BYD3_k127_1660350_4 Domain of unknown function (DUF4395) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007604 301.0
BYD3_k127_1660350_5 selenocysteine lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007295 267.0
BYD3_k127_1660350_6 metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004484 251.0
BYD3_k127_1660350_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000003253 212.0
BYD3_k127_1660350_8 DinB family - - - 0.000000000000000000000000000000000000000000000000000000000003617 212.0
BYD3_k127_1660350_9 - - - - 0.0000000000000000000000000000000000000000000000000001343 194.0
BYD3_k127_1665270_0 - - - - 0.000000000000000000000000000000000000000009022 160.0
BYD3_k127_1665270_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01751,K01754,K06016,K17989,K21400 GO:0000287,GO:0003674,GO:0003824,GO:0003941,GO:0004793,GO:0004794,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006082,GO:0006090,GO:0006464,GO:0006520,GO:0006549,GO:0006563,GO:0006565,GO:0006566,GO:0006567,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008838,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009070,GO:0009071,GO:0009081,GO:0009082,GO:0009097,GO:0009987,GO:0016020,GO:0016053,GO:0016054,GO:0016597,GO:0016829,GO:0016830,GO:0016832,GO:0016840,GO:0016841,GO:0016853,GO:0016854,GO:0016855,GO:0017144,GO:0018249,GO:0019538,GO:0019752,GO:0019842,GO:0030170,GO:0030378,GO:0030848,GO:0031406,GO:0032787,GO:0036094,GO:0036211,GO:0036361,GO:0042219,GO:0042802,GO:0042803,GO:0042866,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0046416,GO:0046437,GO:0046872,GO:0046983,GO:0047661,GO:0048037,GO:0050662,GO:0070178,GO:0070179,GO:0070279,GO:0071704,GO:0071944,GO:0072330,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.3.1.263,3.5.1.6,3.5.1.87,4.3.1.15,4.3.1.17,4.3.1.19 0.0000000000000000000000000000000000000006941 150.0
BYD3_k127_1665270_2 Beta-lactamase - - - 0.0000000000000000000000000000249 133.0
BYD3_k127_1665270_3 - - - - 0.00000000000001464 76.0
BYD3_k127_1671276_0 Amino acid permease K03294 - - 1.729e-223 702.0
BYD3_k127_1671276_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000001267 208.0
BYD3_k127_1671276_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000004471 206.0
BYD3_k127_1671276_3 Outer membrane chaperone Skp K06142 - - 0.000000000000000000000000002442 119.0
BYD3_k127_1672122_0 Domain of unknown function (DUF4450) - - - 0.0 1289.0
BYD3_k127_1672122_1 Fg-gap repeat K18197 - 4.2.2.23 5.201e-279 869.0
BYD3_k127_1672122_2 PFAM Glycosyl hydrolases family 28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 611.0
BYD3_k127_1672122_3 Glycosyl Hydrolase Family 88 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 595.0
BYD3_k127_1672122_4 PFAM sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004968 534.0
BYD3_k127_1672122_5 SPTR Beta-galactosidase I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007787 449.0
BYD3_k127_1672122_6 hydrolase, family 65, central catalytic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 383.0
BYD3_k127_1672122_7 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 352.0
BYD3_k127_1672122_8 Histidine biosynthesis bifunctional protein hisIE K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 295.0
BYD3_k127_1672122_9 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K01663,K02500,K11755 GO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009382,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 3.5.4.19,3.6.1.31 0.00000000000000000000000000000003007 126.0
BYD3_k127_1688856_0 GH3 auxin-responsive promoter - - - 8.704e-262 812.0
BYD3_k127_1688856_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 1.046e-204 642.0
BYD3_k127_1688856_2 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 479.0
BYD3_k127_1688856_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000001977 147.0
BYD3_k127_1688856_4 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000009257 79.0
BYD3_k127_1713629_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1372.0
BYD3_k127_1713629_1 - - - - 0.0000000000000000000000000000000000001029 158.0
BYD3_k127_1713629_2 chaperone-mediated protein folding K08309 - - 0.00000000000000000000000000000003562 141.0
BYD3_k127_1720529_0 of the RND superfamily K07003 - - 8.521e-318 990.0
BYD3_k127_1720529_1 TonB dependent receptor - - - 4.025e-265 853.0
BYD3_k127_1720529_2 Two component regulator propeller domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000006596 219.0
BYD3_k127_1725096_0 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family - - - 3.1e-241 758.0
BYD3_k127_1725096_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 477.0
BYD3_k127_1725096_2 Rieske (2Fe-2S) domain K05710 - - 0.0000000000000000000000000000000002519 133.0
BYD3_k127_1756220_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.0 1051.0
BYD3_k127_1756220_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.202e-290 897.0
BYD3_k127_1756220_2 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 1.134e-223 698.0
BYD3_k127_1756220_3 Penicillin binding protein transpeptidase domain K17838 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 391.0
BYD3_k127_1756220_4 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000399 256.0
BYD3_k127_1756220_5 YhhN family - - - 0.0000000000000000000000000000000000000006389 156.0
BYD3_k127_1763848_0 Peptidase family M1 domain - - - 2.734e-278 867.0
BYD3_k127_1763848_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 4.934e-273 847.0
BYD3_k127_1763848_10 secreted Zn-dependent protease - - - 0.000000000000000000000000000000000002903 143.0
BYD3_k127_1763848_11 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000028 132.0
BYD3_k127_1763848_15 energy transducer activity K03832 - - 0.00000000001873 69.0
BYD3_k127_1763848_2 Belongs to the peptidase M24B family K01262 - 3.4.11.9 5.034e-215 676.0
BYD3_k127_1763848_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 4.524e-202 634.0
BYD3_k127_1763848_4 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 509.0
BYD3_k127_1763848_5 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 366.0
BYD3_k127_1763848_6 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 321.0
BYD3_k127_1763848_7 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 289.0
BYD3_k127_1763848_8 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 290.0
BYD3_k127_1763848_9 deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001457 236.0
BYD3_k127_1792469_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 508.0
BYD3_k127_1792469_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003904 430.0
BYD3_k127_1792469_2 Outer membrane protein beta-barrel family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006259 322.0
BYD3_k127_1792469_3 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000765 198.0
BYD3_k127_1819342_0 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000006681 154.0
BYD3_k127_1819342_1 leucine- rich repeat protein - - - 0.0000000001231 74.0
BYD3_k127_1819342_2 COGs COG3324 protein related to lactoylglutathione lyase - - - 0.00000003692 57.0
BYD3_k127_1838643_0 Beta-galactosidase - - - 0.0 1247.0
BYD3_k127_1838643_1 alpha-L-rhamnosidase - - - 0.0 1097.0
BYD3_k127_1838643_2 hydrolase, family 65, central catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 625.0
BYD3_k127_1839784_0 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 0.0 1115.0
BYD3_k127_1839784_1 Erythromycin esterase K06880 - - 1.732e-261 808.0
BYD3_k127_1839784_2 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007629 585.0
BYD3_k127_1839784_3 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 469.0
BYD3_k127_1839784_4 Domain of unknown function (DUF892) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002318 241.0
BYD3_k127_1839784_5 Dienelactone hydrolase family - - - 0.0000000000000000000006496 96.0
BYD3_k127_1839784_6 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000002196 67.0
BYD3_k127_1842101_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 374.0
BYD3_k127_1842101_1 - - - - 0.00000000000000000000000000000000000000000002355 169.0
BYD3_k127_1842101_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000001103 125.0
BYD3_k127_1885522_0 COGs COG1253 Hemolysins and related protein containing CBS domains K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000464 316.0
BYD3_k127_1885522_1 PFAM sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 310.0
BYD3_k127_1885522_2 Phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000008346 204.0
BYD3_k127_1928601_0 metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004215 536.0
BYD3_k127_1928601_1 ketosteroid isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008152 239.0
BYD3_k127_1938070_0 InterPro IPR003838 K02004 - - 5.876e-309 965.0
BYD3_k127_1938070_1 MacB-like periplasmic core domain K02004 - - 7.08e-258 818.0
BYD3_k127_1938070_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 372.0
BYD3_k127_1964648_0 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000002941 190.0
BYD3_k127_1964648_1 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions - - - 0.0000000000000000000007009 98.0
BYD3_k127_1964648_2 - - - - 0.0000000000000000000007621 99.0
BYD3_k127_1964866_0 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 387.0
BYD3_k127_1964866_1 Glycosyltransferase, group 2 family protein K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003061 282.0
BYD3_k127_1964866_2 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000009581 254.0
BYD3_k127_1964866_4 GH3 auxin-responsive promoter - - - 0.0005016 42.0
BYD3_k127_1964922_0 PFAM Peptidase M1 membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0 1051.0
BYD3_k127_1964922_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 1.596e-206 647.0
BYD3_k127_1964922_10 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000644 239.0
BYD3_k127_1964922_11 Leucine-rich repeat (LRR) protein - - - 0.0000000000000000000000000000000000000000000000000000000004221 229.0
BYD3_k127_1964922_12 PFAM Acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000002067 214.0
BYD3_k127_1964922_13 TPM domain - - - 0.0000000000000000000000000000000000000000000000000001634 189.0
BYD3_k127_1964922_14 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000005226 184.0
BYD3_k127_1964922_15 translation initiation factor activity K02487,K13582 - - 0.0000000000000000000000000000000000000000000000009183 191.0
BYD3_k127_1964922_16 Histidine kinase - - - 0.0000000000000000000000000000000000002599 151.0
BYD3_k127_1964922_17 - - - - 0.00000000000000000000000000000000000233 160.0
BYD3_k127_1964922_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 1.938e-197 617.0
BYD3_k127_1964922_20 - - - - 0.0000000000582 64.0
BYD3_k127_1964922_3 Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate K01815 - 5.3.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004415 344.0
BYD3_k127_1964922_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000358 363.0
BYD3_k127_1964922_5 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 307.0
BYD3_k127_1964922_6 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005597 266.0
BYD3_k127_1964922_7 COG1512 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003882 266.0
BYD3_k127_1964922_8 chlorophyll binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002123 260.0
BYD3_k127_1964922_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004339 246.0
BYD3_k127_1966148_0 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 8.197e-263 823.0
BYD3_k127_1966148_1 Domain of unknown function (DUF4407) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 524.0
BYD3_k127_1966148_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000656 504.0
BYD3_k127_1966148_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006114 284.0
BYD3_k127_1966148_4 PFAM Uncharacterised protein family UPF0029, Impact, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004317 263.0
BYD3_k127_1966148_5 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000001958 231.0
BYD3_k127_1966148_6 Immunoglobulin-like domain of bacterial spore germination - - - 0.00000000000000000000000000000009676 124.0
BYD3_k127_1966148_7 biopolymer transport protein K03559 - - 0.00000000000000000000009953 102.0
BYD3_k127_1966148_9 Bacterial inner membrane protein - - - 0.000000000074 65.0
BYD3_k127_1967106_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 2.449e-223 698.0
BYD3_k127_1967106_1 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 432.0
BYD3_k127_1967106_10 peptidase M23 - - - 0.000000000000000000000000000000000000000001818 162.0
BYD3_k127_1967106_11 Saccharopine dehydrogenase C-terminal domain - - - 0.00000000000000000000000000000000000009586 145.0
BYD3_k127_1967106_13 - - - - 0.0000000000000000000000000000002544 132.0
BYD3_k127_1967106_15 - - - - 0.00000000000000000000000000002041 127.0
BYD3_k127_1967106_16 - - - - 0.0000000000000000000000003884 114.0
BYD3_k127_1967106_17 - - - - 0.000000000000000000000008472 111.0
BYD3_k127_1967106_18 - - - - 0.00000000000000000000004751 108.0
BYD3_k127_1967106_19 - - - - 0.00000000000000000000005153 105.0
BYD3_k127_1967106_2 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 387.0
BYD3_k127_1967106_20 - - - - 0.0000000000000000000001511 107.0
BYD3_k127_1967106_22 - - - - 0.00000000000000000208 94.0
BYD3_k127_1967106_23 - - - - 0.00000000000000001387 92.0
BYD3_k127_1967106_24 - - - - 0.0000000000000005527 87.0
BYD3_k127_1967106_3 PFAM Scaffold protein Nfu NifU N terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003157 363.0
BYD3_k127_1967106_4 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 372.0
BYD3_k127_1967106_5 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005268 322.0
BYD3_k127_1967106_6 AAA domain, putative AbiEii toxin, Type IV TA system K20459 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 315.0
BYD3_k127_1967106_8 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000086 186.0
BYD3_k127_1967106_9 ArsC family K00537 - 1.20.4.1 0.0000000000000000000000000000000000000000000774 165.0
BYD3_k127_1968401_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000002545 229.0
BYD3_k127_1968401_1 Two component regulator three Y - - - 0.00000000000000000000000000000000000000000000000000000000000001312 231.0
BYD3_k127_1968401_2 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000005217 127.0
BYD3_k127_1996179_0 PFAM metallophosphoesterase - - - 1.343e-236 772.0
BYD3_k127_1996179_1 S1 P1 Nuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009351 438.0
BYD3_k127_1996179_2 Domain of unknown function (DUF4347) - - - 0.0000000000000000000000000000000000000000000000004569 202.0
BYD3_k127_1996179_3 Fibrinogen-related domains (FReDs) - - - 0.00000000000001255 89.0
BYD3_k127_1999679_0 Putative Phosphatase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 520.0
BYD3_k127_1999679_1 Voltage gated chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 404.0
BYD3_k127_1999679_2 Endonuclease containing a URI domain K07461 - - 0.000000000000000000008143 96.0
BYD3_k127_1999679_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0001422 45.0
BYD3_k127_1999679_4 Excinuclease ABC C subunit domain protein K07461 - - 0.0001577 49.0
BYD3_k127_1999679_5 L,D-transpeptidase catalytic domain K21470 - - 0.0003284 46.0
BYD3_k127_2006152_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1251.0
BYD3_k127_2006152_1 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 0.0 1048.0
BYD3_k127_2006152_10 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003485 313.0
BYD3_k127_2006152_12 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000001725 236.0
BYD3_k127_2006152_13 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000003885 244.0
BYD3_k127_2006152_14 sugar transferase K03606 - - 0.000000000000000000000000000000000000000000000000000000002576 208.0
BYD3_k127_2006152_15 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000000006287 213.0
BYD3_k127_2006152_16 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000000003685 204.0
BYD3_k127_2006152_17 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000784 196.0
BYD3_k127_2006152_18 - - - - 0.000000000000000000000000000000000000000000000000008249 183.0
BYD3_k127_2006152_19 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000003007 179.0
BYD3_k127_2006152_2 COG2373 Large extracellular alpha-helical protein - - - 6.687e-313 970.0
BYD3_k127_2006152_20 (GNAT) family K02348 - - 0.0000000000000000000000000000000000000000000001888 172.0
BYD3_k127_2006152_21 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000001872 171.0
BYD3_k127_2006152_22 Pfam PAP2 superfamily - - - 0.000000000000000000000000000000000000004247 154.0
BYD3_k127_2006152_23 extracellular matrix structural constituent - - - 0.00000000000000000000000000000000003225 158.0
BYD3_k127_2006152_24 Peptidase, M28 - - - 0.00000000000000000000000000000003342 127.0
BYD3_k127_2006152_25 GIY-YIG catalytic domain K07461 - - 0.00000000003497 67.0
BYD3_k127_2006152_26 luxR family K03088,K21405 - - 0.0000000003406 62.0
BYD3_k127_2006152_27 helix_turn_helix, Lux Regulon - - - 0.00000001803 58.0
BYD3_k127_2006152_28 - - - - 0.00000002229 65.0
BYD3_k127_2006152_29 PFAM polysaccharide biosynthesis protein - - - 0.00000005352 65.0
BYD3_k127_2006152_3 homoserine dehydrogenase K00003 - 1.1.1.3 2.553e-213 668.0
BYD3_k127_2006152_30 receptor K04527,K05086,K05087 GO:0000003,GO:0000166,GO:0000187,GO:0000768,GO:0000902,GO:0000904,GO:0001101,GO:0001505,GO:0001540,GO:0001558,GO:0001655,GO:0001678,GO:0001700,GO:0001882,GO:0001883,GO:0001932,GO:0001933,GO:0001934,GO:0001965,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002119,GO:0002164,GO:0002376,GO:0002791,GO:0002792,GO:0003006,GO:0003007,GO:0003008,GO:0003205,GO:0003230,GO:0003674,GO:0003824,GO:0004672,GO:0004713,GO:0004714,GO:0004888,GO:0005009,GO:0005010,GO:0005102,GO:0005158,GO:0005159,GO:0005488,GO:0005504,GO:0005515,GO:0005520,GO:0005524,GO:0005525,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005829,GO:0005886,GO:0005887,GO:0005899,GO:0005901,GO:0005929,GO:0005975,GO:0005979,GO:0006109,GO:0006110,GO:0006140,GO:0006355,GO:0006464,GO:0006468,GO:0006469,GO:0006629,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006935,GO:0006949,GO:0006950,GO:0006955,GO:0006979,GO:0006996,GO:0007010,GO:0007088,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007186,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007285,GO:0007292,GO:0007346,GO:0007390,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007444,GO:0007446,GO:0007507,GO:0007520,GO:0007525,GO:0007530,GO:0007548,GO:0007568,GO:0007569,GO:0007584,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007617,GO:0007618,GO:0007623,GO:0007626,GO:0007631,GO:0008144,GO:0008150,GO:0008152,GO:0008284,GO:0008286,GO:0008289,GO:0008340,GO:0008356,GO:0008361,GO:0008406,GO:0008544,GO:0008582,GO:0008584,GO:0008585,GO:0009266,GO:0009267,GO:0009268,GO:0009314,GO:0009408,GO:0009410,GO:0009411,GO:0009416,GO:0009605,GO:0009612,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009790,GO:0009791,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009897,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0009991,GO:0010008,GO:0010033,GO:0010035,GO:0010038,GO:0010042,GO:0010243,GO:0010259,GO:0010286,GO:0010310,GO:0010446,GO:0010468,GO:0010506,GO:0010507,GO:0010556,GO:0010557,GO:0010559,GO:0010560,GO:0010562,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010656,GO:0010660,GO:0010675,GO:0010676,GO:0010720,GO:0010817,GO:0010827,GO:0010828,GO:0010883,GO:0010884,GO:0010888,GO:0010893,GO:0010906,GO:0010907,GO:0010941,GO:0010962,GO:0010975,GO:0010976,GO:0012505,GO:0014041,GO:0014042,GO:0014065,GO:0014066,GO:0014068,GO:0014070,GO:0014823,GO:0014902,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0016049,GO:0016241,GO:0016301,GO:0016310,GO:0016500,GO:0016740,GO:0016772,GO:0016773,GO:0017046,GO:0017076,GO:0017145,GO:0018108,GO:0018193,GO:0018212,GO:0019001,GO:0019048,GO:0019087,GO:0019098,GO:0019199,GO:0019216,GO:0019218,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019725,GO:0019838,GO:0019899,GO:0019900,GO:0019901,GO:0019902,GO:0019903,GO:0019904,GO:0019953,GO:0021537,GO:0021543,GO:0021549,GO:0021761,GO:0021766,GO:0022008,GO:0022037,GO:0022412,GO:0022414,GO:0022607,GO:0022611,GO:0022612,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030010,GO:0030029,GO:0030030,GO:0030036,GO:0030154,GO:0030182,GO:0030238,GO:0030307,GO:0030315,GO:0030325,GO:0030334,GO:0030335,GO:0030424,GO:0030425,GO:0030536,GO:0030537,GO:0030554,GO:0030707,GO:0030808,GO:0030810,GO:0030811,GO:0030813,GO:0030850,GO:0030855,GO:0030879,GO:0030900,GO:0030902,GO:0031016,GO:0031017,GO:0031090,GO:0031175,GO:0031224,GO:0031226,GO:0031252,GO:0031253,GO:0031256,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031331,GO:0031344,GO:0031346,GO:0031399,GO:0031400,GO:0031401,GO:0031405,GO:0031406,GO:0031410,GO:0031532,GO:0031667,GO:0031668,GO:0031669,GO:0031960,GO:0031982,GO:0031994,GO:0031995,GO:0032006,GO:0032008,GO:0032101,GO:0032103,GO:0032147,GO:0032148,GO:0032268,GO:0032269,GO:0032270,GO:0032350,GO:0032352,GO:0032355,GO:0032386,GO:0032387,GO:0032409,GO:0032410,GO:0032465,GO:0032467,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0032570,GO:0032589,GO:0032590,GO:0032809,GO:0032868,GO:0032869,GO:0032870,GO:0032872,GO:0032879,GO:0032880,GO:0032881,GO:0032885,GO:0032989,GO:0032990,GO:0032991,GO:0033043,GO:0033157,GO:0033197,GO:0033218,GO:0033273,GO:0033280,GO:0033293,GO:0033500,GO:0033554,GO:0033574,GO:0033673,GO:0033674,GO:0033688,GO:0033690,GO:0033993,GO:0034059,GO:0034097,GO:0034284,GO:0034612,GO:0034762,GO:0034764,GO:0035094,GO:0035264,GO:0035265,GO:0035270,GO:0035272,GO:0035295,GO:0035556,GO:0035639,GO:0035690,GO:0035821,GO:0035867,GO:0036094,GO:0036211,GO:0036293,GO:0036335,GO:0036477,GO:0038023,GO:0038083,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040014,GO:0040015,GO:0040017,GO:0040018,GO:0040024,GO:0040034,GO:0042078,GO:0042127,GO:0042169,GO:0042220,GO:0042221,GO:0042277,GO:0042306,GO:0042308,GO:0042321,GO:0042325,GO:0042326,GO:0042327,GO:0042330,GO:0042383,GO:0042493,GO:0042562,GO:0042592,GO:0042593,GO:0042594,GO:0042632,GO:0042692,GO:0042698,GO:0042749,GO:0042752,GO:0042754,GO:0042802,GO:0042981,GO:0042995,GO:0043005,GO:0043025,GO:0043054,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043235,GO:0043243,GO:0043244,GO:0043255,GO:0043279,GO:0043405,GO:0043406,GO:0043408,GO:0043409,GO:0043410,GO:0043412,GO:0043423,GO:0043433,GO:0043434,GO:0043467,GO:0043470,GO:0043548,GO:0043549,GO:0043559,GO:0043560,GO:0043933,GO:0043954,GO:0044003,GO:0044085,GO:0044087,GO:0044088,GO:0044089,GO:0044092,GO:0044093,GO:0044214,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044297,GO:0044298,GO:0044403,GO:0044419,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044849,GO:0044853,GO:0044877,GO:0045121,GO:0045137,GO:0045187,GO:0045202,GO:0045428,GO:0045429,GO:0045444,GO:0045471,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045725,GO:0045787,GO:0045793,GO:0045821,GO:0045834,GO:0045840,GO:0045859,GO:0045860,GO:0045887,GO:0045893,GO:0045913,GO:0045926,GO:0045927,GO:0045931,GO:0045935,GO:0045936,GO:0045937,GO:0045940,GO:0045981,GO:0045995,GO:0046324,GO:0046326,GO:0046328,GO:0046545,GO:0046546,GO:0046620,GO:0046622,GO:0046626,GO:0046627,GO:0046660,GO:0046661,GO:0046677,GO:0046777,GO:0046822,GO:0046823,GO:0046883,GO:0046885,GO:0046886,GO:0046888,GO:0046889,GO:0046890,GO:0048009,GO:0048015,GO:0048017,GO:0048037,GO:0048132,GO:0048133,GO:0048232,GO:0048468,GO:0048477,GO:0048511,GO:0048513,GO:0048518,GO:0048519,GO:0048521,GO:0048522,GO:0048523,GO:0048545,GO:0048580,GO:0048581,GO:0048583,GO:0048584,GO:0048585,GO:0048588,GO:0048589,GO:0048598,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048640,GO:0048646,GO:0048660,GO:0048661,GO:0048666,GO:0048667,GO:0048679,GO:0048680,GO:0048699,GO:0048729,GO:0048731,GO:0048732,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048872,GO:0048878,GO:0050662,GO:0050767,GO:0050769,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050795,GO:0050803,GO:0050804,GO:0050806,GO:0050807,GO:0050808,GO:0050810,GO:0050877,GO:0050890,GO:0050896,GO:0051046,GO:0051048,GO:0051049,GO:0051050,GO:0051051,GO:0051052,GO:0051054,GO:0051090,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051146,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051193,GO:0051194,GO:0051196,GO:0051197,GO:0051223,GO:0051224,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051259,GO:0051262,GO:0051270,GO:0051272,GO:0051290,GO:0051291,GO:0051301,GO:0051302,GO:0051338,GO:0051347,GO:0051348,GO:0051384,GO:0051385,GO:0051389,GO:0051425,GO:0051445,GO:0051446,GO:0051701,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051817,GO:0051896,GO:0051897,GO:0051898,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0055082,GO:0055088,GO:0055090,GO:0055092,GO:0055115,GO:0055116,GO:0055123,GO:0060089,GO:0060180,GO:0060249,GO:0060250,GO:0060255,GO:0060259,GO:0060263,GO:0060267,GO:0060284,GO:0060322,GO:0060341,GO:0060359,GO:0060429,GO:0060512,GO:0060548,GO:0060740,GO:0061061,GO:0061062,GO:0061064,GO:0061065,GO:0061067,GO:0061458,GO:0061564,GO:0061695,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070302,GO:0070328,GO:0070344,GO:0070346,GO:0070482,GO:0070570,GO:0070572,GO:0070848,GO:0070873,GO:0070875,GO:0070887,GO:0071214,GO:0071260,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071363,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071389,GO:0071392,GO:0071393,GO:0071394,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071467,GO:0071469,GO:0071495,GO:0071496,GO:0071548,GO:0071549,GO:0071559,GO:0071560,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0071981,GO:0072347,GO:0072359,GO:0080090,GO:0080134,GO:0080135,GO:0089717,GO:0090030,GO:0090031,GO:0090066,GO:0090068,GO:0090087,GO:0090276,GO:0090278,GO:0090317,GO:0090398,GO:0097061,GO:0097062,GO:0097159,GO:0097242,GO:0097305,GO:0097306,GO:0097327,GO:0097367,GO:0097447,GO:0097458,GO:0097485,GO:0097708,GO:0097730,GO:0098552,GO:0098588,GO:0098589,GO:0098590,GO:0098722,GO:0098728,GO:0098796,GO:0098797,GO:0098802,GO:0098805,GO:0098857,GO:0099173,GO:0099177,GO:0104004,GO:0106027,GO:0110096,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:1900073,GO:1900075,GO:1900076,GO:1900077,GO:1900180,GO:1900181,GO:1900371,GO:1900373,GO:1900542,GO:1900544,GO:1901031,GO:1901265,GO:1901363,GO:1901564,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901681,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902065,GO:1902074,GO:1902075,GO:1902115,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902680,GO:1902882,GO:1902911,GO:1903018,GO:1903020,GO:1903034,GO:1903036,GO:1903426,GO:1903428,GO:1903429,GO:1903431,GO:1903432,GO:1903506,GO:1903508,GO:1903530,GO:1903531,GO:1903578,GO:1903580,GO:1903827,GO:1903828,GO:1903943,GO:1903944,GO:1903998,GO:1904035,GO:1904036,GO:1904044,GO:1904045,GO:1904192,GO:1904193,GO:1904263,GO:1904385,GO:1904396,GO:1904398,GO:1904407,GO:1904589,GO:1904590,GO:1904645,GO:1904646,GO:1904799,GO:1904801,GO:1904950,GO:1905909,GO:1905910,GO:1905939,GO:1905952,GO:1905953,GO:1905954,GO:1990234,GO:1990314,GO:1990535,GO:1990776,GO:2000026,GO:2000112,GO:2000145,GO:2000147,GO:2000194,GO:2000241,GO:2000243,GO:2000252,GO:2000377,GO:2000379,GO:2000785,GO:2001141,GO:2001169,GO:2001171 2.7.10.1 0.000000115 67.0
BYD3_k127_2006152_32 HYR domain K03286 - - 0.000004081 62.0
BYD3_k127_2006152_33 O-Antigen ligase - - - 0.00001132 58.0
BYD3_k127_2006152_4 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 1.861e-203 639.0
BYD3_k127_2006152_5 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 586.0
BYD3_k127_2006152_6 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 468.0
BYD3_k127_2006152_7 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004594 421.0
BYD3_k127_2006152_8 Glycosyl transferase family 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 401.0
BYD3_k127_2006152_9 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 376.0
BYD3_k127_2019205_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.0 1262.0
BYD3_k127_2019205_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0 1113.0
BYD3_k127_2019205_10 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009294 323.0
BYD3_k127_2019205_11 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 308.0
BYD3_k127_2019205_12 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000002106 196.0
BYD3_k127_2019205_14 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000000000005549 115.0
BYD3_k127_2019205_15 Erythromycin esterase - - - 0.000000000000000000001459 108.0
BYD3_k127_2019205_17 Sec-independent protein translocase protein TatA K03116 - - 0.000000000000000005968 85.0
BYD3_k127_2019205_19 - - - - 0.00003737 50.0
BYD3_k127_2019205_2 Endoribonuclease that initiates mRNA decay K18682 - - 7.206e-275 851.0
BYD3_k127_2019205_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 6.014e-229 713.0
BYD3_k127_2019205_4 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 1.014e-225 704.0
BYD3_k127_2019205_5 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.54e-206 651.0
BYD3_k127_2019205_6 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) K03545 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 577.0
BYD3_k127_2019205_7 PFAM chorismate binding K01665,K03342 - 2.6.1.85,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008602 462.0
BYD3_k127_2019205_8 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007616 396.0
BYD3_k127_2019205_9 PFAM Transglycosylase SLT domain K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007124 372.0
BYD3_k127_2047546_0 COGs COG0488 ATPase components of ABC transporter with duplicated ATPase domains - - - 5.874e-249 775.0
BYD3_k127_2047546_1 TonB-dependent receptor - - - 4.29e-237 755.0
BYD3_k127_2047546_2 PFAM ABC transporter related K01990,K20459 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 398.0
BYD3_k127_2047546_3 ABC-2 family transporter protein K20461 - - 0.000000000000000000000000000000000000000000003275 173.0
BYD3_k127_2050387_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639,K20967 - 4.1.99.22,4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 501.0
BYD3_k127_2050387_1 MoeA C-terminal region (domain IV) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 476.0
BYD3_k127_2050387_10 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.000000000000000000000000000000000000000000000000000000003246 205.0
BYD3_k127_2050387_11 PFAM Carbon monoxide dehydrogenase subunit G (CoxG) K09386 - - 0.0000000000000000000000000000000000000000007562 161.0
BYD3_k127_2050387_12 Cytochrome C oxidase, cbb3-type, subunit III K00405 - - 0.000000000000000000000000000004415 124.0
BYD3_k127_2050387_13 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide - - - 0.00000000000000000002077 95.0
BYD3_k127_2050387_14 ThiS family K03636 - - 0.00000000000000000003281 92.0
BYD3_k127_2050387_15 Putative beta-lactamase-inhibitor-like, PepSY-like - - - 0.000000000000000001063 91.0
BYD3_k127_2050387_16 Putative beta-lactamase-inhibitor-like, PepSY-like - - - 0.0006473 47.0
BYD3_k127_2050387_2 COGs COG1975 Xanthine and CO dehydrogenase maturation factor XdhC CoxF family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 476.0
BYD3_k127_2050387_3 UBA THIF-type NAD FAD binding protein K21029,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 439.0
BYD3_k127_2050387_4 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 416.0
BYD3_k127_2050387_5 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005561 354.0
BYD3_k127_2050387_6 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008875 303.0
BYD3_k127_2050387_7 PFAM Aldehyde oxidase xanthine dehydrogenase, molybdopterin binding K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005715 267.0
BYD3_k127_2050387_8 Pfam:Pyridox_oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008366 266.0
BYD3_k127_2050387_9 SdiA-regulated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002361 258.0
BYD3_k127_205195_0 Gaf domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 540.0
BYD3_k127_205195_1 Short-chain dehydrogenase reductase SDR K00034 - 1.1.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009755 398.0
BYD3_k127_205195_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 346.0
BYD3_k127_205195_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000002464 224.0
BYD3_k127_205195_4 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000001113 150.0
BYD3_k127_205195_6 Septum formation initiator - - - 0.0000000000000000000002212 100.0
BYD3_k127_205195_7 PFAM Outer membrane efflux protein - - - 0.0000000000000000000008497 109.0
BYD3_k127_205195_8 - - - - 0.00000000000000000002201 93.0
BYD3_k127_213024_0 DNA photolyase K01669 - 4.1.99.3 1.522e-206 649.0
BYD3_k127_213024_1 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009259 479.0
BYD3_k127_213024_10 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000452 206.0
BYD3_k127_213024_11 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.00000000000000000000000000000000000000000000000345 180.0
BYD3_k127_213024_12 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000007599 162.0
BYD3_k127_213024_13 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000002408 160.0
BYD3_k127_213024_14 - - - - 0.0004218 51.0
BYD3_k127_213024_2 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 377.0
BYD3_k127_213024_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 382.0
BYD3_k127_213024_4 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 334.0
BYD3_k127_213024_5 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007825 329.0
BYD3_k127_213024_6 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 323.0
BYD3_k127_213024_7 6-pyruvoyl tetrahydrobiopterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000001118 243.0
BYD3_k127_213024_8 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00826,K02619 - 2.6.1.42,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000004256 247.0
BYD3_k127_213024_9 Pfam 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000000000002826 213.0
BYD3_k127_2221620_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1682.0
BYD3_k127_2221620_1 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0 1584.0
BYD3_k127_2221620_10 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 482.0
BYD3_k127_2221620_11 of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 386.0
BYD3_k127_2221620_12 Oxidoreductase FAD-binding domain K00523,K05784 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 341.0
BYD3_k127_2221620_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 303.0
BYD3_k127_2221620_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000007892 184.0
BYD3_k127_2221620_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.000000000000000000000000000000000000000002988 158.0
BYD3_k127_2221620_16 - - - - 0.0000000000000000000000000000003062 124.0
BYD3_k127_2221620_17 - - - - 0.000000000000000000000000000001796 121.0
BYD3_k127_2221620_18 Sulfatase-modifying factor enzyme 1 - - - 0.000000006951 67.0
BYD3_k127_2221620_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1129.0
BYD3_k127_2221620_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 9.518e-295 909.0
BYD3_k127_2221620_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 1.822e-255 796.0
BYD3_k127_2221620_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 2.106e-207 649.0
BYD3_k127_2221620_6 acyl-CoA dehydrogenase - - - 1.297e-203 638.0
BYD3_k127_2221620_7 phosphohydrolase K06885 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 581.0
BYD3_k127_2221620_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 573.0
BYD3_k127_2221620_9 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007431 531.0
BYD3_k127_2296463_0 Mandelate racemase muconate lactonizing enzyme, N-terminal - - - 1.615e-251 781.0
BYD3_k127_2296463_1 Oxidoreductase domain protein - - - 2.444e-199 625.0
BYD3_k127_2296463_2 PFAM Bile acid sodium symporter K03453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003402 477.0
BYD3_k127_2296463_3 Intracellular protease, PfpI family K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 315.0
BYD3_k127_2296463_4 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal K01684 - 4.2.1.6 0.0000000000000000000000000000000000006202 140.0
BYD3_k127_2296463_5 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000002486 56.0
BYD3_k127_2332611_0 peptidase S9B dipeptidylpeptidase IV domain protein - - - 0.0 1197.0
BYD3_k127_2332611_1 COGs COG0058 Glucan phosphorylase K00688,K00691 - 2.4.1.1,2.4.1.8 4.102e-320 984.0
BYD3_k127_2332611_10 Conserved Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 387.0
BYD3_k127_2332611_11 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009236 351.0
BYD3_k127_2332611_12 protein homooligomerization - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 351.0
BYD3_k127_2332611_13 epimerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006429 301.0
BYD3_k127_2332611_14 Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001485 273.0
BYD3_k127_2332611_15 Plasmid pRiA4b ORF-3-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001958 271.0
BYD3_k127_2332611_16 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005715 272.0
BYD3_k127_2332611_17 Belongs to the SUA5 family K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000003481 265.0
BYD3_k127_2332611_19 cyclic nucleotide binding - - - 0.00000000000000000000000000000000000000000000000000000000000000001096 230.0
BYD3_k127_2332611_2 AMP-dependent synthetase and ligase K01908 - 6.2.1.17 2.191e-279 871.0
BYD3_k127_2332611_20 Acetyltransferase (GNAT) domain K03829 - - 0.00000000000000000000000000000000000000000000000000000000000001286 218.0
BYD3_k127_2332611_21 cyclic nucleotide binding - - - 0.0000000000000000000000000000000000000000000000000000000000000162 221.0
BYD3_k127_2332611_22 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000003491 217.0
BYD3_k127_2332611_23 cyclic nucleotide binding - - - 0.00000000000000000000000000000000000000000000000000000004937 201.0
BYD3_k127_2332611_24 - - - - 0.00000000000000000000000000000000000000000000001935 177.0
BYD3_k127_2332611_25 Protein of unknown function (DUF1622) - - - 0.000000000000000000000000000000000000000001058 159.0
BYD3_k127_2332611_26 SdiA-regulated - - - 0.000000000000000000000000000000000000002838 158.0
BYD3_k127_2332611_27 - - - - 0.00000000000000000000000000000000000002271 152.0
BYD3_k127_2332611_28 Domain of unknown function (DUF202) K00389 - - 0.00000000000000000000000000000000000131 142.0
BYD3_k127_2332611_29 - - - - 0.00000000000000000009281 95.0
BYD3_k127_2332611_3 H( )-stimulated, divalent metal cation uptake system K03322 - - 2.338e-255 801.0
BYD3_k127_2332611_30 - - - - 0.000000000000004139 81.0
BYD3_k127_2332611_31 PFAM Resolvase, N-terminal - - - 0.000003056 49.0
BYD3_k127_2332611_4 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 5.436e-254 786.0
BYD3_k127_2332611_5 PFAM Serine carboxypeptidase - - - 9.085e-248 772.0
BYD3_k127_2332611_6 tRNA nucleotidyltransferase K00970,K00974 - 2.7.7.19,2.7.7.72 2.032e-228 715.0
BYD3_k127_2332611_7 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity K00945,K02945,K03527 - 1.17.7.4,2.7.4.25 4.786e-203 637.0
BYD3_k127_2332611_8 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 482.0
BYD3_k127_2332611_9 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 484.0
BYD3_k127_2337961_0 Fumarase C C-terminus K01744 - 4.3.1.1 2.024e-260 808.0
BYD3_k127_2337961_1 Asparaginase K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008097 588.0
BYD3_k127_2337961_2 Phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 414.0
BYD3_k127_2337961_3 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001546 267.0
BYD3_k127_2340820_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0 1091.0
BYD3_k127_2340820_1 PFAM tRNA synthetases class I (E and Q), catalytic domain K01886 - 6.1.1.18 4.186e-285 880.0
BYD3_k127_2340820_2 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 2.694e-271 842.0
BYD3_k127_2340820_3 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000000001043 170.0
BYD3_k127_2340820_4 - - - - 0.0000000000000000000000000000000000000000008471 162.0
BYD3_k127_2340820_5 - - - - 0.000000000002581 72.0
BYD3_k127_2362610_0 Peptidase M14, carboxypeptidase A - - - 1.241e-256 802.0
BYD3_k127_2362610_1 PFAM Major Facilitator Superfamily K08156 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 463.0
BYD3_k127_2362610_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 409.0
BYD3_k127_2362610_3 PFAM beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 403.0
BYD3_k127_2362610_4 Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.00000000000000000000000000000000000000000000000000000596 201.0
BYD3_k127_2362610_5 Protein of unknown function (DUF1223) - - - 0.00000000000000000000000000000000000000004775 157.0
BYD3_k127_2362610_6 lipolytic protein G-D-S-L family - - - 0.00000003359 64.0
BYD3_k127_2362610_7 Protein of unknown function (DUF1223) - - - 0.00001476 48.0
BYD3_k127_23683_0 Dienelactone hydrolase family - - - 1.129e-296 921.0
BYD3_k127_23683_1 COGs COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 504.0
BYD3_k127_23683_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 343.0
BYD3_k127_2372339_0 Glycosyl hydrolases family 2, TIM barrel domain K01190 - 3.2.1.23 0.0 1362.0
BYD3_k127_2372339_1 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000434 361.0
BYD3_k127_2372339_2 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000006793 178.0
BYD3_k127_2453649_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 597.0
BYD3_k127_2453649_1 COGs COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 516.0
BYD3_k127_2453649_10 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000207 57.0
BYD3_k127_2453649_2 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008825 494.0
BYD3_k127_2453649_3 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008599 469.0
BYD3_k127_2453649_4 Oxidoreductase family, C-terminal alpha beta domain K13016 - 1.1.1.335 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 471.0
BYD3_k127_2453649_5 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009304 421.0
BYD3_k127_2453649_6 PFAM Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 411.0
BYD3_k127_2453649_7 PFAM ABC-2 type transporter K09690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 358.0
BYD3_k127_2453649_8 Hexapeptide repeat of succinyl-transferase K13018 - 2.3.1.201 0.00000000000000000000000000000000000000000000000000000000000000000002178 237.0
BYD3_k127_2453649_9 WxcM-like, C-terminal - - - 0.000000000000000000000000000000000000000000002876 167.0
BYD3_k127_2457848_0 Glycosyl hydrolase family 65, N-terminal domain K15923 - 3.2.1.51 0.0 1324.0
BYD3_k127_2457848_1 COGs COG2382 Enterochelin esterase K07214 - - 0.0 1101.0
BYD3_k127_2457848_2 Belongs to the glycosyl hydrolase 2 family K05970 - 3.1.1.53 0.0 1013.0
BYD3_k127_2457848_3 Alpha-L-arabinofuranosidase domain protein K01209 - 3.2.1.55 3.886e-224 704.0
BYD3_k127_2457848_4 PFAM Alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 531.0
BYD3_k127_2457848_5 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000003301 72.0
BYD3_k127_2462504_0 Protein of unknown function (DUF2652) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 319.0
BYD3_k127_2462504_1 2-methylthioadenine synthetase K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000003882 245.0
BYD3_k127_2482898_0 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 455.0
BYD3_k127_2482898_1 leucine binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009494 335.0
BYD3_k127_2482898_2 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000000005749 103.0
BYD3_k127_2493262_0 Uncharacterized protein conserved in bacteria (DUF2309) K09822 - - 0.0 1094.0
BYD3_k127_2493262_1 transporter - - - 2.395e-254 791.0
BYD3_k127_2493262_10 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 325.0
BYD3_k127_2493262_11 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 297.0
BYD3_k127_2493262_12 Protein of unknown function (DUF2490) - - - 0.0000000000000000000000000000000000000000000000000000000000000000005986 237.0
BYD3_k127_2493262_13 - - - - 0.00000000000000000000000000001502 119.0
BYD3_k127_2493262_14 Transcription factor zinc-finger K09981 - - 0.00000000000000000000003926 101.0
BYD3_k127_2493262_2 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) K01673,K03321 - 4.2.1.1 3.051e-249 779.0
BYD3_k127_2493262_3 NADH ubiquinone oxidoreductase subunit 5 (chain L) multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004339 612.0
BYD3_k127_2493262_4 COG1055 Na H antiporter NhaD and related arsenite - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 549.0
BYD3_k127_2493262_5 beta-1,4-mannooligosaccharide phosphorylase K21065 - 3.2.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000616 464.0
BYD3_k127_2493262_6 COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000734 415.0
BYD3_k127_2493262_7 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 393.0
BYD3_k127_2493262_8 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 371.0
BYD3_k127_2493262_9 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 327.0
BYD3_k127_2497452_0 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000004722 230.0
BYD3_k127_2497452_1 Putative esterase K07017 - - 0.00000000000000000000000000000000000000000000000000000000002254 220.0
BYD3_k127_2497452_2 DinB family - - - 0.0000000000000000000000000001668 119.0
BYD3_k127_2501829_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.223e-202 635.0
BYD3_k127_2501829_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009308 589.0
BYD3_k127_2501829_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 365.0
BYD3_k127_2501829_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000002697 226.0
BYD3_k127_2515968_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 597.0
BYD3_k127_2515968_1 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 413.0
BYD3_k127_2515968_2 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 318.0
BYD3_k127_2515968_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004282 256.0
BYD3_k127_2515968_4 - - - - 0.00000000000000000000000000000009006 125.0
BYD3_k127_2515968_5 thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000439 97.0
BYD3_k127_2516113_0 COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit K02621 - - 0.0 1318.0
BYD3_k127_2516113_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 475.0
BYD3_k127_2516113_2 Protein of unknown function - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 366.0
BYD3_k127_2516113_3 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008881 239.0
BYD3_k127_2516113_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002794 231.0
BYD3_k127_2534363_0 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 362.0
BYD3_k127_2534363_1 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.0000000000000000000000000000000000000000000000002204 180.0
BYD3_k127_2534363_2 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.0000000000000000000000000000000000000000000001399 171.0
BYD3_k127_2534363_3 - - - - 0.00000000000000000000000000000000000003945 147.0
BYD3_k127_2534363_4 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.00000000000000000000001051 101.0
BYD3_k127_2565020_0 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004072 481.0
BYD3_k127_2565020_1 carbonic anhydrase K01674 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000008005 217.0
BYD3_k127_2565020_2 - - - - 0.000000000000000000000000000000000000000000000000000000001783 207.0
BYD3_k127_2565020_3 Protein of unknown function, DUF481 - - - 0.0000000000000000000000000000000000000000000000006148 182.0
BYD3_k127_2565020_4 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000004375 181.0
BYD3_k127_2604121_0 Oligoendopeptidase F K08602 - - 1.223e-283 880.0
BYD3_k127_2604121_1 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 587.0
BYD3_k127_2604121_10 - - - - 0.00000000000000000000000000000000000000000000000000000000883 201.0
BYD3_k127_2604121_11 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000001816 200.0
BYD3_k127_2604121_12 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000000000000000000003448 177.0
BYD3_k127_2604121_13 COG2346, Truncated hemoglobins K06886 - - 0.00000000000000000000000000000000000000000000005609 171.0
BYD3_k127_2604121_14 MerC mercury resistance protein - - - 0.000000000000000000000000000000000000000509 152.0
BYD3_k127_2604121_2 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 553.0
BYD3_k127_2604121_3 Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000369 563.0
BYD3_k127_2604121_4 Uncharacterized protein conserved in bacteria (DUF2330) K00347,K21163 GO:0000166,GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008137,GO:0008144,GO:0008150,GO:0008152,GO:0010181,GO:0015672,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0019842,GO:0030001,GO:0030964,GO:0032553,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0044425,GO:0044464,GO:0048037,GO:0050136,GO:0050662,GO:0051179,GO:0051234,GO:0055114,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:1901265,GO:1901363,GO:1902444,GO:1902494 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 559.0
BYD3_k127_2604121_5 peptidase M1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 497.0
BYD3_k127_2604121_6 nitrite reductase [NAD(P)H] activity K00158,K03809 - 1.2.3.3,1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 466.0
BYD3_k127_2604121_7 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 411.0
BYD3_k127_2604121_8 PFAM Glycosyl hydrolases family 25 K07273 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005954 331.0
BYD3_k127_2604121_9 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000001202 238.0
BYD3_k127_2615297_0 DNA polymerase K02347 - - 1.908e-212 674.0
BYD3_k127_2615297_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 336.0
BYD3_k127_2615297_2 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000009582 154.0
BYD3_k127_2617126_0 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 316.0
BYD3_k127_2617126_1 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000002221 181.0
BYD3_k127_2617126_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000003789 137.0
BYD3_k127_2617126_3 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.00000003094 61.0
BYD3_k127_2625612_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000253 226.0
BYD3_k127_2625612_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000002628 177.0
BYD3_k127_2625612_3 - - - - 0.0000001316 53.0
BYD3_k127_2627153_0 Glycosyl hydrolase family 65 central catalytic domain - - - 0.0 1143.0
BYD3_k127_2627153_1 PFAM TonB-dependent Receptor Plug K21573 - - 0.0 1053.0
BYD3_k127_2627153_10 - - - - 0.0000000000000000000000000001531 121.0
BYD3_k127_2627153_2 PAP2 superfamily - - - 1.029e-227 715.0
BYD3_k127_2627153_3 SPTR Phosphoesterase, PA-phosphatase related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 536.0
BYD3_k127_2627153_4 Protein of unknown function (DUF3179) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 443.0
BYD3_k127_2627153_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 431.0
BYD3_k127_2627153_6 PFAM periplasmic binding protein LacI transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 424.0
BYD3_k127_2627153_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 395.0
BYD3_k127_2627153_8 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 284.0
BYD3_k127_2627153_9 RagB SusD domain protein K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000637 263.0
BYD3_k127_2628959_0 SnoaL-like domain - - - 0.0 1406.0
BYD3_k127_2628959_1 Y_Y_Y domain - - - 0.0 1057.0
BYD3_k127_2628959_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000396 523.0
BYD3_k127_2628959_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 512.0
BYD3_k127_2628959_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008974 510.0
BYD3_k127_2628959_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 508.0
BYD3_k127_2628959_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 392.0
BYD3_k127_2628959_7 Acetyl-coenzyme A transporter 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005048 281.0
BYD3_k127_2668166_0 Motility related/secretion protein - - - 0.0 1020.0
BYD3_k127_2718566_0 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 550.0
BYD3_k127_2718566_1 PcfJ-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006662 264.0
BYD3_k127_2718566_2 Ribonuclease H-like K09776 - - 0.00000000000000000003462 89.0
BYD3_k127_2736741_0 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 444.0
BYD3_k127_2736741_1 Trehalose utilisation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002752 265.0
BYD3_k127_2736741_2 PFAM RNA polymerase sigma factor 70, region 4 type 2 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000004056 216.0
BYD3_k127_2736741_3 - - - - 0.0000000000000000000000000000007781 134.0
BYD3_k127_2736741_4 - - - - 0.0000000000000000000000000732 114.0
BYD3_k127_27431_0 COG2373 Large extracellular alpha-helical protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 534.0
BYD3_k127_2757374_0 DNA helicase K03657 - 3.6.4.12 7.278e-229 714.0
BYD3_k127_2757374_1 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 602.0
BYD3_k127_2757374_2 Peptidase family S58 K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008746 477.0
BYD3_k127_2757374_3 OmpA family K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 394.0
BYD3_k127_2757374_4 OmpA family K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 379.0
BYD3_k127_2757374_5 Amino-transferase class IV K00824,K00826 - 2.6.1.21,2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000758 312.0
BYD3_k127_2757374_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 283.0
BYD3_k127_2757374_7 Helix-turn-helix domain - - - 0.0000000000000000004605 97.0
BYD3_k127_2757374_8 - - - - 0.00001145 50.0
BYD3_k127_2780429_0 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 524.0
BYD3_k127_2780429_1 Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000001161 193.0
BYD3_k127_2780429_2 transcription elongation factor GreA K06140 - - 0.00000000000000000000000000000007551 128.0
BYD3_k127_2780429_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000006566 107.0
BYD3_k127_2780429_5 Flavodoxin - - - 0.00000000000000001788 82.0
BYD3_k127_2906349_0 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 599.0
BYD3_k127_2906349_1 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 316.0
BYD3_k127_2914954_0 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 2.1e-249 789.0
BYD3_k127_2914954_1 COGs COG2723 Beta-glucosidase 6-phospho-beta-glucosidase beta- galactosidase - - - 5.249e-230 715.0
BYD3_k127_2914954_2 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 7.062e-202 632.0
BYD3_k127_2914954_3 COG0562 UDP-galactopyranose mutase K01854 - 5.4.99.9 7.771e-202 633.0
BYD3_k127_2914954_4 PFAM UDP-galactopyranose mutase, C-terminal K01854 - 5.4.99.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 443.0
BYD3_k127_2914954_5 Pregnancy-associated plasma protein-A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 369.0
BYD3_k127_2914954_6 endonuclease I K01337 - 3.4.21.50 0.00000000344 71.0
BYD3_k127_2934835_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006668 295.0
BYD3_k127_2934835_1 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003124 276.0
BYD3_k127_2934835_2 - - - - 0.000000000000000000000000004879 118.0
BYD3_k127_2934835_3 CDGSH iron-sulfur domain-containing protein 3 - - - 0.00000000000000000003317 92.0
BYD3_k127_2934835_4 - - - - 0.000001492 58.0
BYD3_k127_2966904_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 0.0 1049.0
BYD3_k127_2966904_1 Acetolactate synthase, large subunit K01652 - 2.2.1.6 1.151e-308 952.0
BYD3_k127_2966904_10 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004196 394.0
BYD3_k127_2966904_11 D-isomer specific 2-hydroxyacid dehydrogenase K00015,K15893 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 392.0
BYD3_k127_2966904_12 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 389.0
BYD3_k127_2966904_13 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 374.0
BYD3_k127_2966904_14 phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 342.0
BYD3_k127_2966904_15 synthase small subunit K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 318.0
BYD3_k127_2966904_16 very-long-chain-acyl-CoA dehydrogenase activity K17880,K18817 - 2.7.1.119,2.7.1.163 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 309.0
BYD3_k127_2966904_17 Fibronectin type III domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002757 276.0
BYD3_k127_2966904_18 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000003414 214.0
BYD3_k127_2966904_19 PFAM DinB - - - 0.000000000000000000000000000000000000000000000000000001744 196.0
BYD3_k127_2966904_2 GMC oxidoreductase - - - 7.183e-284 880.0
BYD3_k127_2966904_20 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000000003261 163.0
BYD3_k127_2966904_21 Gluconate 2-dehydrogenase subunit 3 - - - 0.000000000000000000000000000000000003714 143.0
BYD3_k127_2966904_22 Domain of unknown function (DUF4342) - - - 0.00000000000000000000000646 104.0
BYD3_k127_2966904_23 integral membrane protein - - - 0.0000000000000001955 89.0
BYD3_k127_2966904_24 PAS domain containing protein K13924 - 2.1.1.80,3.1.1.61 0.0000000004026 67.0
BYD3_k127_2966904_26 Fe2 -dicitrate sensor, membrane component - - - 0.000003644 54.0
BYD3_k127_2966904_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 8.879e-231 721.0
BYD3_k127_2966904_4 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 1.589e-220 689.0
BYD3_k127_2966904_5 TonB-dependent Receptor Plug - - - 5.972e-220 707.0
BYD3_k127_2966904_6 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 2.495e-213 665.0
BYD3_k127_2966904_7 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009112 610.0
BYD3_k127_2966904_8 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000609 583.0
BYD3_k127_2966904_9 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 543.0
BYD3_k127_2968159_0 Transport of potassium into the cell K03549 - - 1.56e-318 985.0
BYD3_k127_2968159_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008717 515.0
BYD3_k127_2968159_2 Transport of potassium into the cell K03549 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 454.0
BYD3_k127_2968159_4 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000002957 80.0
BYD3_k127_3005582_0 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 0.0 1232.0
BYD3_k127_3005582_1 Aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 9.581e-244 760.0
BYD3_k127_3005582_10 Domain of unknown function (DUF4476) - - - 0.000000000000000000001062 105.0
BYD3_k127_3005582_11 - - - - 0.00000002113 62.0
BYD3_k127_3005582_2 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 610.0
BYD3_k127_3005582_3 Alpha-2-macroglobulin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000893 593.0
BYD3_k127_3005582_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 518.0
BYD3_k127_3005582_5 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 425.0
BYD3_k127_3005582_6 Belongs to the aldehyde dehydrogenase family K22187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 389.0
BYD3_k127_3005582_7 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000922 360.0
BYD3_k127_3005582_8 Domain of unknown function (DUF4198) - - - 0.00000000000000000000000000000000000000000001581 171.0
BYD3_k127_3005582_9 PFAM Sporulation related domain - - - 0.000000000000000000000000000000000000002859 152.0
BYD3_k127_302565_0 Prolyl oligopeptidase family - - - 0.0 1155.0
BYD3_k127_302565_1 Anthranilate synthase K01657 - 4.1.3.27 9.229e-235 732.0
BYD3_k127_302565_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004736 559.0
BYD3_k127_302565_3 COGs COG1228 Imidazolonepropionase and related amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 553.0
BYD3_k127_302565_4 sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 540.0
BYD3_k127_302565_5 Glycosyl hydrolases family 16 K01216 - 3.2.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 357.0
BYD3_k127_302565_6 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005942 307.0
BYD3_k127_302565_7 GCN5-related N-acetyl-transferase K06975 - - 0.000000000000000000000000005531 112.0
BYD3_k127_3058172_0 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 5.218e-247 778.0
BYD3_k127_3058172_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007348 361.0
BYD3_k127_3058172_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 318.0
BYD3_k127_3058172_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 302.0
BYD3_k127_3058172_4 protein-disulfide reductase activity K04084 - 1.8.1.8 0.00000000000000000000000000000000000000003004 157.0
BYD3_k127_3073093_0 ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K17686 - 3.6.3.54 7.281e-303 945.0
BYD3_k127_3073093_1 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 458.0
BYD3_k127_3073093_2 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000000000000005045 187.0
BYD3_k127_3077344_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 1.697e-288 892.0
BYD3_k127_3077344_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 639.0
BYD3_k127_3077344_10 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000000000000004083 156.0
BYD3_k127_3077344_11 Cupin domain - - - 0.0000000000000000000000000000000000002183 147.0
BYD3_k127_3077344_12 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000001153 138.0
BYD3_k127_3077344_13 - - - - 0.0000000000000000000000001732 115.0
BYD3_k127_3077344_14 alginic acid biosynthetic process - - - 0.00000001294 62.0
BYD3_k127_3077344_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 476.0
BYD3_k127_3077344_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004427 435.0
BYD3_k127_3077344_4 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007795 351.0
BYD3_k127_3077344_5 Forms part of the polypeptide exit tunnel K02926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000682 329.0
BYD3_k127_3077344_6 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008165 285.0
BYD3_k127_3077344_7 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000009116 196.0
BYD3_k127_3077344_8 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000002717 188.0
BYD3_k127_3077344_9 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000006784 172.0
BYD3_k127_31118_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 2.284e-245 766.0
BYD3_k127_31118_1 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 381.0
BYD3_k127_31118_2 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 340.0
BYD3_k127_31118_3 Clp protease adaptor protein ClpS K06891 - - 0.00000000000000000000000000000000000000000004174 162.0
BYD3_k127_31118_4 Protein of unknown function (DUF2652) - - - 0.00000000000000000000000000000000001409 141.0
BYD3_k127_31551_0 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 404.0
BYD3_k127_31551_1 antisigma factor binding K04749 - - 0.0000000000000000000000000000000001207 137.0
BYD3_k127_31551_2 Putative esterase - - - 0.0000000000000000000000001887 108.0
BYD3_k127_320468_0 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.0 1208.0
BYD3_k127_320468_1 PFAM Tetratricopeptide - - - 0.0 1144.0
BYD3_k127_320468_10 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 434.0
BYD3_k127_320468_11 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006341 412.0
BYD3_k127_320468_12 PFAM Methyltransferase type 12 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 369.0
BYD3_k127_320468_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 356.0
BYD3_k127_320468_15 PFAM EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 341.0
BYD3_k127_320468_16 Glutamine cyclotransferase K00683 - 2.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 289.0
BYD3_k127_320468_17 Glutamine cyclotransferase K00683 - 2.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002185 276.0
BYD3_k127_320468_18 PFAM Pregnancy-associated plasma protein-A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008599 275.0
BYD3_k127_320468_19 cyclopropane-fatty-acyl-phospholipid synthase K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000001642 239.0
BYD3_k127_320468_2 peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.0 1054.0
BYD3_k127_320468_20 Protein of unknown function (DUF1211) - - - 0.0000000000000000000000000000000000000000000000000000000000001665 217.0
BYD3_k127_320468_21 Peptidase M50 - - - 0.000000000000000000000000000000000000000000000000000000000004322 219.0
BYD3_k127_320468_22 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000000000000007195 183.0
BYD3_k127_320468_23 - - - - 0.000000000000000000000000000000000000002311 151.0
BYD3_k127_320468_24 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000768 134.0
BYD3_k127_320468_25 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000000000000000295 113.0
BYD3_k127_320468_26 Universal stress protein - - - 0.00000000000000000000000009598 119.0
BYD3_k127_320468_27 Phosphoglycerate mutase family - - - 0.0000000000000000000000001166 113.0
BYD3_k127_320468_28 Domain of unknown function (DUF4295) - - - 0.000000000000000000000009365 100.0
BYD3_k127_320468_29 - - - - 0.00000000000000000000003174 107.0
BYD3_k127_320468_3 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) K00382 - 1.8.1.4 9.29e-264 818.0
BYD3_k127_320468_30 COG NOG30135 non supervised orthologous group - - - 0.000000000003619 73.0
BYD3_k127_320468_31 Methane oxygenase PmoA - - - 0.00000000006788 66.0
BYD3_k127_320468_4 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 2.999e-241 749.0
BYD3_k127_320468_5 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 4.634e-238 754.0
BYD3_k127_320468_6 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008373 563.0
BYD3_k127_320468_7 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 540.0
BYD3_k127_320468_8 receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 499.0
BYD3_k127_320468_9 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 488.0
BYD3_k127_3220214_0 TonB-dependent Receptor Plug - - - 0.0 1221.0
BYD3_k127_3220214_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 4.771e-288 891.0
BYD3_k127_3220214_2 SusD family K21572 - - 4.201e-267 831.0
BYD3_k127_3220214_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 3.698e-201 634.0
BYD3_k127_3220214_4 Inositol oxygenase K00469 - 1.13.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 526.0
BYD3_k127_3220214_5 helix_turn _helix lactose operon repressor K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 403.0
BYD3_k127_3220214_6 NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 364.0
BYD3_k127_3220214_7 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003436 346.0
BYD3_k127_3220214_8 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007711 279.0
BYD3_k127_3220214_9 - - - - 0.0000000000000000000000000000000000000000000000000000000001546 210.0
BYD3_k127_326402_0 PFAM RNA polymerase sigma factor 54, interaction - - - 4.786e-209 682.0
BYD3_k127_326402_1 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 406.0
BYD3_k127_326402_2 HSCB C-terminal oligomerisation domain K04082 - - 0.0000000000000000000000000000000000000000000000000008563 189.0
BYD3_k127_3266607_0 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 609.0
BYD3_k127_3266607_1 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 602.0
BYD3_k127_3266607_10 lysine 2,3-aminomutase activity - - - 0.000000007407 57.0
BYD3_k127_3266607_11 Protein of unknown function (DUF1211) - - - 0.0006531 44.0
BYD3_k127_3266607_2 Glycogen recognition site of AMP-activated protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 440.0
BYD3_k127_3266607_3 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 376.0
BYD3_k127_3266607_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001845 259.0
BYD3_k127_3266607_5 Platelet-activating factor acetylhydrolase, isoform II - - - 0.000000000000000000000000000000000000000000000000000000000000000000167 244.0
BYD3_k127_3266607_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000003976 234.0
BYD3_k127_3266607_7 Major intrinsic protein K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000003403 230.0
BYD3_k127_3266607_8 SCO1/SenC - - - 0.00000000000000000000000000006744 124.0
BYD3_k127_3266607_9 Protein of unknown function (DUF1622) - - - 0.0000000000000000000000001319 109.0
BYD3_k127_329050_0 NmrA-like family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 295.0
BYD3_k127_329050_1 Phospholipase/Carboxylesterase - - - 0.000006659 57.0
BYD3_k127_3296660_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1301.0
BYD3_k127_3296660_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.442e-293 907.0
BYD3_k127_3296660_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005312 271.0
BYD3_k127_3296660_11 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000002357 251.0
BYD3_k127_3296660_12 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000004702 241.0
BYD3_k127_3296660_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000004333 241.0
BYD3_k127_3296660_14 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000007194 252.0
BYD3_k127_3296660_15 Chitinase class I - - - 0.0000000000000000000000000000000000000000000000000000000008228 206.0
BYD3_k127_3296660_16 Thioesterase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000003078 190.0
BYD3_k127_3296660_17 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000004504 164.0
BYD3_k127_3296660_18 S23 ribosomal protein - - - 0.0000000000000000000000000000000000000000001265 162.0
BYD3_k127_3296660_19 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000002095 156.0
BYD3_k127_3296660_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 9.069e-224 709.0
BYD3_k127_3296660_20 Methyltransferase domain - - - 0.000000000000000000000000000002316 129.0
BYD3_k127_3296660_22 response regulator, receiver - - - 0.000000000000000000000002485 109.0
BYD3_k127_3296660_23 TIGRFAM conserved repeat domain - - - 0.000000007303 70.0
BYD3_k127_3296660_3 PFAM Tetratricopeptide repeat - - - 6.113e-221 693.0
BYD3_k127_3296660_4 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 537.0
BYD3_k127_3296660_5 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 - 4.4.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 462.0
BYD3_k127_3296660_6 2-dehydro-3-deoxyphosphooctonate aldolase K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 424.0
BYD3_k127_3296660_7 PFAM Shikimate dehydrogenase substrate binding K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 321.0
BYD3_k127_3296660_8 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006442 279.0
BYD3_k127_3296660_9 Domain of unknown function (DUF4382) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005897 281.0
BYD3_k127_331891_0 glycosyl transferase family 2 K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 456.0
BYD3_k127_331891_1 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005852 375.0
BYD3_k127_331891_2 Protein of unknown function (DUF3667) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005256 326.0
BYD3_k127_331891_3 self proteolysis - - - 0.00000000000000000000000000000000000000000000797 173.0
BYD3_k127_331891_5 GIY-YIG catalytic domain K07461 - - 0.000000000512 64.0
BYD3_k127_331891_6 - - - - 0.00000419 49.0
BYD3_k127_332444_0 RNA polymerase, sigma-54 factor K03092 - - 6.682e-235 734.0
BYD3_k127_332444_1 Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613 580.0
BYD3_k127_332444_2 PFAM Uncharacterised BCR, COG1649 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 561.0
BYD3_k127_332444_3 PFAM Allophanate hydrolase subunit 2 K06350 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 307.0
BYD3_k127_332444_4 Belongs to the UPF0271 (lamB) family K07160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005231 291.0
BYD3_k127_332444_5 PFAM Allophanate hydrolase subunit 1 K06351 - - 0.000000000000000000000000000000000000000000000000000000001127 209.0
BYD3_k127_332444_6 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000009071 192.0
BYD3_k127_332444_7 phosphoesterase, PA-phosphatase related - - - 0.00000000000000000000000000000000000000000000000000005449 195.0
BYD3_k127_332444_8 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000003937 173.0
BYD3_k127_3327722_0 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 5.19e-239 748.0
BYD3_k127_3327722_1 Peptidase family S58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003412 248.0
BYD3_k127_3327722_3 - - - - 0.00000000000000002106 92.0
BYD3_k127_3359046_0 Domain of unknown function (DUF4954) - - - 0.0 1015.0
BYD3_k127_3359046_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 8.872e-226 705.0
BYD3_k127_3359046_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 414.0
BYD3_k127_3359046_3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.00000000000000000000000001052 109.0
BYD3_k127_3359046_4 GIY-YIG catalytic domain protein K07461 - - 0.00000000000000000000000003736 110.0
BYD3_k127_3435962_0 TonB dependent receptor - - - 0.0 1322.0
BYD3_k127_3435962_1 Pfam:SusD K21572 - - 0.0 1042.0
BYD3_k127_3435962_2 PFAM glycoside hydrolase family 39 K01198 - 3.2.1.37 4.537e-265 824.0
BYD3_k127_3435962_3 Alpha-L-arabinofuranosidase K01209 - 3.2.1.55 3.417e-254 799.0
BYD3_k127_3435962_4 Involved in the tonB-independent uptake of proteins K01730 - 4.2.2.6 2.547e-232 725.0
BYD3_k127_3435962_5 FMN-dependent dehydrogenase K00101,K00467 - 1.1.2.3,1.13.12.4 4.586e-209 654.0
BYD3_k127_3435962_6 Glycosyl Hydrolase Family 88 - - - 5.358e-204 644.0
BYD3_k127_3435962_7 Oligogalacturonate lyase K01730 - 4.2.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 576.0
BYD3_k127_3435962_8 Sugar (Pentulose and hexulose) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 554.0
BYD3_k127_3435962_9 TIGRFAM L-rhamnose catabolism isomerase, Pseudomonas stutzeri subtype K01820 - 5.3.1.14 0.00000000000000000000000000000000000000000000002514 171.0
BYD3_k127_3481240_0 PFAM Family of - - - 0.0 1272.0
BYD3_k127_3481240_1 acyl-CoA dehydrogenase - - - 5.493e-316 974.0
BYD3_k127_3481240_10 TIGRFAM selT selW selH selenoprotein domain K07401 - - 0.000000000000000000000000000000000000000000386 158.0
BYD3_k127_3481240_11 PFAM Photosynthetic reaction centre cytochrome C subunit K13992 - - 0.0000000000000000000000007509 108.0
BYD3_k127_3481240_12 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000001167 95.0
BYD3_k127_3481240_2 Esterase of the alpha-beta hydrolase superfamily - - - 2.548e-291 912.0
BYD3_k127_3481240_3 COGs COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 604.0
BYD3_k127_3481240_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 588.0
BYD3_k127_3481240_5 Cupin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 492.0
BYD3_k127_3481240_6 protein required for cytochrome oxidase assembly K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 466.0
BYD3_k127_3481240_7 Diacylglycerol kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 342.0
BYD3_k127_3481240_8 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 290.0
BYD3_k127_3481240_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000008937 230.0
BYD3_k127_34949_0 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 359.0
BYD3_k127_34949_1 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003183 307.0
BYD3_k127_3497792_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 5.613e-273 844.0
BYD3_k127_3497792_1 Dahp synthetase i kdsa K04516 - 5.4.99.5 1.503e-200 629.0
BYD3_k127_3497792_10 Domain of unknown function (DUF5103) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007156 441.0
BYD3_k127_3497792_11 membrane protein involved in aromatic hydrocarbon degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009701 425.0
BYD3_k127_3497792_12 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009938 419.0
BYD3_k127_3497792_13 Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009301 399.0
BYD3_k127_3497792_14 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 383.0
BYD3_k127_3497792_15 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 355.0
BYD3_k127_3497792_16 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 335.0
BYD3_k127_3497792_17 PFAM Integral membrane protein DUF95 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 335.0
BYD3_k127_3497792_18 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 293.0
BYD3_k127_3497792_19 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005302 265.0
BYD3_k127_3497792_2 Aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 609.0
BYD3_k127_3497792_20 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000002948 192.0
BYD3_k127_3497792_21 - - - - 0.000000000000000000000000000000000000000000000000003049 197.0
BYD3_k127_3497792_22 pfam rdd - - - 0.00000000000000000000000000000000000000000000162 175.0
BYD3_k127_3497792_24 Domain of unknown function (DUF4328) - - - 0.00000000000000000000000000000008251 134.0
BYD3_k127_3497792_25 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000502 120.0
BYD3_k127_3497792_26 - - - - 0.00000000000000000000001523 111.0
BYD3_k127_3497792_27 Interferon-induced transmembrane protein - - - 0.00000000000000000000004493 102.0
BYD3_k127_3497792_28 Protein of unknown function (DUF2752) - - - 0.00000000000000000000004515 103.0
BYD3_k127_3497792_29 Domain of unknown function (DUF4129) - - - 0.0000000000000000000001145 109.0
BYD3_k127_3497792_3 Outer membrane protein protective antigen OMA87 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003892 573.0
BYD3_k127_3497792_30 Family of unknown function (DUF5362) - - - 0.00000000000000000001417 97.0
BYD3_k127_3497792_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 545.0
BYD3_k127_3497792_5 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004594 518.0
BYD3_k127_3497792_6 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004117 493.0
BYD3_k127_3497792_7 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 490.0
BYD3_k127_3497792_8 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008381 466.0
BYD3_k127_3497792_9 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006526 453.0
BYD3_k127_353034_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1109.0
BYD3_k127_353034_1 Heat shock 70 kDa protein K04043 - - 0.0 1032.0
BYD3_k127_353034_10 Domain of unknown function (DUF4403) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 463.0
BYD3_k127_353034_11 COGs COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005984 357.0
BYD3_k127_353034_12 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009511 306.0
BYD3_k127_353034_13 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003975 236.0
BYD3_k127_353034_14 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000004499 241.0
BYD3_k127_353034_15 Protein of unknown function (Porph_ging) - - - 0.00000000000000000000000000000000000000000000000000000000000000000009042 238.0
BYD3_k127_353034_16 Protein of unknown function (DUF3089) - - - 0.000000000000000000000000000000000000000000000000000000000000002037 231.0
BYD3_k127_353034_17 Legume lectin domain - - - 0.000000000000000000000000000000000000000000000000000000000001536 219.0
BYD3_k127_353034_18 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000003229 204.0
BYD3_k127_353034_19 SprB repeat - - - 0.00000000000000000000000000000000000000000000000000000254 212.0
BYD3_k127_353034_2 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 1.837e-288 895.0
BYD3_k127_353034_20 GtrA-like protein - - - 0.000000000000000000000000000000000000000000001563 171.0
BYD3_k127_353034_21 Glyoxalase K04750 - - 0.0000000000000000000000000000000000000001807 153.0
BYD3_k127_353034_22 Psort location CytoplasmicMembrane, score K09793 - - 0.00000000000000000000000000000000000006023 151.0
BYD3_k127_353034_23 major pilin protein fima - - - 0.00000000000000000000006913 106.0
BYD3_k127_353034_24 cellulase activity K20276 - - 0.00000000000000000003013 106.0
BYD3_k127_353034_3 COG0738 Fucose permease K02429 - - 2.606e-276 860.0
BYD3_k127_353034_4 Outer membrane protein beta-barrel family - - - 3.262e-264 842.0
BYD3_k127_353034_5 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 2.039e-237 740.0
BYD3_k127_353034_6 Belongs to the glycosyl hydrolase 13 family K21575 GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016798,GO:0031216,GO:0044464,GO:0071944 3.2.1.135 4.365e-226 716.0
BYD3_k127_353034_7 glucose-1-phosphate adenylyltransferase K00975 - 2.7.7.27 1.279e-216 678.0
BYD3_k127_353034_8 Major facilitator Superfamily K16211 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 561.0
BYD3_k127_353034_9 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 514.0
BYD3_k127_358217_0 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016049,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030154,GO:0030312,GO:0030313,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1079.0
BYD3_k127_358217_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006667 583.0
BYD3_k127_358217_2 Mandelate racemase muconate lactonizing enzyme K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 443.0
BYD3_k127_358217_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003016 291.0
BYD3_k127_358217_4 Leucine-rich repeat (LRR) protein - - - 0.000000000000000000000000000000000000000000000000000000009136 213.0
BYD3_k127_358217_5 Belongs to the UPF0145 family - - - 0.00000000000000000000000000000000000000007863 153.0
BYD3_k127_358217_6 Hexapeptide repeat of succinyl-transferase K02617,K08279 - - 0.0000000000000000000001466 98.0
BYD3_k127_3603384_0 Glucose / Sorbosone dehydrogenase - - - 0.0 1043.0
BYD3_k127_3603384_1 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 4.782e-194 612.0
BYD3_k127_3603384_10 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000101 156.0
BYD3_k127_3603384_11 - - - - 0.00000000000000000000000001787 110.0
BYD3_k127_3603384_12 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000003484 111.0
BYD3_k127_3603384_2 COGs COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 576.0
BYD3_k127_3603384_3 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 431.0
BYD3_k127_3603384_4 DNA helicase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 377.0
BYD3_k127_3603384_5 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 358.0
BYD3_k127_3603384_6 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000706 367.0
BYD3_k127_3603384_7 Alpha/beta hydrolase family K07020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 311.0
BYD3_k127_3603384_8 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 297.0
BYD3_k127_3603384_9 PFAM Alcohol dehydrogenase, zinc-binding K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000003535 190.0
BYD3_k127_36060_0 Histidine kinase - - - 5.169e-273 903.0
BYD3_k127_36060_1 Subtilase family - - - 5.697e-225 772.0
BYD3_k127_36060_10 Belongs to the P-Pant transferase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002801 252.0
BYD3_k127_36060_11 calcium- and calmodulin-responsive adenylate cyclase activity K01406 - 3.4.24.40 0.00000000000000000000000000000000000000000000000000000000000000000000001735 257.0
BYD3_k127_36060_12 InterPro IPR010287 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000614 245.0
BYD3_k127_36060_13 protein-glutamate methylesterase K00575,K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000008169 246.0
BYD3_k127_36060_14 Belongs to the CinA family K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000138 198.0
BYD3_k127_36060_15 COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) K05770 - - 0.0000000000000000000000000000000000000000000000001027 181.0
BYD3_k127_36060_16 D-alanyl-D-alanine carboxypeptidase - - - 0.00000000000000000000000000000000000000003452 162.0
BYD3_k127_36060_17 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000002229 108.0
BYD3_k127_36060_18 cheY-homologous receiver domain - - - 0.00000000000000000000000006286 111.0
BYD3_k127_36060_19 Low affinity iron permease - - - 0.0000000000000001791 84.0
BYD3_k127_36060_2 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 5.334e-207 662.0
BYD3_k127_36060_20 membrane - - - 0.0000004958 55.0
BYD3_k127_36060_21 nucleotidyltransferase activity - - - 0.00002196 47.0
BYD3_k127_36060_3 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 495.0
BYD3_k127_36060_4 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 461.0
BYD3_k127_36060_5 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 451.0
BYD3_k127_36060_6 belongs to the carbohydrate kinase PfkB family K00917,K16370 - 2.7.1.11,2.7.1.144 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005267 387.0
BYD3_k127_36060_7 Deoxycytidine triphosphate deaminase K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009557 346.0
BYD3_k127_36060_8 Protein of unknown function (DUF3810) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 338.0
BYD3_k127_36060_9 acr, cog1399 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 288.0
BYD3_k127_3614068_0 AsmA-like C-terminal region - - - 0.0 1054.0
BYD3_k127_3614068_1 Tetratricopeptide repeat - - - 2.559e-269 844.0
BYD3_k127_3614068_10 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000001605 212.0
BYD3_k127_3614068_11 Uncharacterized protein conserved in bacteria (DUF2200) - - - 0.0000000000000000000000000000000000000000000000000000001003 196.0
BYD3_k127_3614068_12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.0000000000000000000000000000000000000000000000000000001187 197.0
BYD3_k127_3614068_13 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000001483 190.0
BYD3_k127_3614068_14 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000001205 160.0
BYD3_k127_3614068_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000004029 141.0
BYD3_k127_3614068_16 gag-polyprotein putative aspartyl protease - - - 0.00000000000000005009 87.0
BYD3_k127_3614068_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 566.0
BYD3_k127_3614068_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009631 505.0
BYD3_k127_3614068_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009227 402.0
BYD3_k127_3614068_5 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008847 329.0
BYD3_k127_3614068_6 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003015 264.0
BYD3_k127_3614068_7 Belongs to the MtfA family K09933 - - 0.000000000000000000000000000000000000000000000000000000000000000000106 239.0
BYD3_k127_3614068_8 Protein of unknown function (DUF998) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001596 237.0
BYD3_k127_3614068_9 Protein of unknown function (DUF421) - - - 0.00000000000000000000000000000000000000000000000000000000000000001786 232.0
BYD3_k127_3617115_0 Oxidoreductase domain protein - - - 9.783e-222 693.0
BYD3_k127_3617115_1 Putative Phosphatase K01079 - 3.1.3.3 1.961e-219 688.0
BYD3_k127_3617115_10 AMP binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 293.0
BYD3_k127_3617115_11 Diacylglycerol kinase catalytic domain (presumed) - - - 0.0000000000000000000000000000000003655 142.0
BYD3_k127_3617115_12 AMP binding - - - 0.00000000000000001594 93.0
BYD3_k127_3617115_13 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.000000343 53.0
BYD3_k127_3617115_2 Domain of Unknown Function (DUF1080) - - - 4.156e-213 669.0
BYD3_k127_3617115_3 PFAM Cytochrome c, class I - - - 1.283e-198 629.0
BYD3_k127_3617115_4 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 568.0
BYD3_k127_3617115_5 AMP binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 375.0
BYD3_k127_3617115_6 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 353.0
BYD3_k127_3617115_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006981 360.0
BYD3_k127_3617115_8 alpha-2-macroglobulin domain protein K06894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 347.0
BYD3_k127_3617115_9 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 332.0
BYD3_k127_3657787_0 DNA mismatch repair protein MutS - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004427 529.0
BYD3_k127_3657787_1 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000001252 153.0
BYD3_k127_3658114_0 Glycogen debranching enzyme - - - 6.366e-195 617.0
BYD3_k127_3658114_1 protein homotetramerization - GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005267,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015267,GO:0015318,GO:0015672,GO:0016043,GO:0022607,GO:0022803,GO:0022838,GO:0022840,GO:0022841,GO:0022842,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0043933,GO:0044085,GO:0046873,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055085,GO:0065003,GO:0071804,GO:0071805,GO:0071840,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000001161 171.0
BYD3_k127_3658114_2 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000001081 152.0
BYD3_k127_3660185_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 0.0 1011.0
BYD3_k127_3660185_1 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 1.171e-294 914.0
BYD3_k127_3660185_10 PFAM Major Facilitator Superfamily - - - 4.091e-206 648.0
BYD3_k127_3660185_11 Nucleoside H+ symporter - - - 2.163e-195 616.0
BYD3_k127_3660185_12 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 585.0
BYD3_k127_3660185_13 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006713 557.0
BYD3_k127_3660185_14 DNA polymerase III, epsilon subunit K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 538.0
BYD3_k127_3660185_15 PFAM peptidase T2 asparaginase 2 K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006994 481.0
BYD3_k127_3660185_16 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 430.0
BYD3_k127_3660185_17 Hydroxypyruvate isomerase K01816 - 5.3.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007029 429.0
BYD3_k127_3660185_18 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 421.0
BYD3_k127_3660185_19 Ion channel K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007677 390.0
BYD3_k127_3660185_2 GMC oxidoreductase - - - 1.505e-285 884.0
BYD3_k127_3660185_20 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 373.0
BYD3_k127_3660185_21 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 363.0
BYD3_k127_3660185_22 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 334.0
BYD3_k127_3660185_23 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006911 302.0
BYD3_k127_3660185_24 Participates in the control of copper homeostasis K06201 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 295.0
BYD3_k127_3660185_25 Dual-action HEIGH metallo-peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000453 265.0
BYD3_k127_3660185_26 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002731 256.0
BYD3_k127_3660185_27 (twin-arginine translocation) pathway signal - - - 0.000000000000000000000000000000000000000000000000000000000000000000004375 240.0
BYD3_k127_3660185_28 (twin-arginine translocation) pathway signal - - - 0.0000000000000000000000000000000000000000000000000000000000000005439 224.0
BYD3_k127_3660185_29 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000003018 186.0
BYD3_k127_3660185_3 Oxidoreductase - - - 1.817e-264 823.0
BYD3_k127_3660185_30 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000001158 192.0
BYD3_k127_3660185_31 Protein of unknown function (DUF1573) - - - 0.00000000000000000000000000000000000000000003374 165.0
BYD3_k127_3660185_32 Protein of unknown function (DUF1573) - - - 0.00000000000000000000000000000000000000003222 156.0
BYD3_k127_3660185_33 Cytochrome c K08738 - - 0.00000000000000000000000000000000000001378 147.0
BYD3_k127_3660185_34 guanyl-nucleotide exchange factor activity - - - 0.0000000000000000000000000000000000742 153.0
BYD3_k127_3660185_35 regulator of chromosome condensation, RCC1 - - - 0.000000000000000000000001046 115.0
BYD3_k127_3660185_36 regulator of chromosome condensation, RCC1 - - - 0.000000000000000000000002245 118.0
BYD3_k127_3660185_37 regulator of chromosome condensation, RCC1 - - - 0.000000000000000000000009427 116.0
BYD3_k127_3660185_38 SAP or adhesin AidA-related K01727 - 4.2.2.1 0.0000000000000000002647 102.0
BYD3_k127_3660185_39 Protein of unknown function (DUF1761) - - - 0.00000000000008951 78.0
BYD3_k127_3660185_4 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 8.17e-260 807.0
BYD3_k127_3660185_5 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 4.404e-252 791.0
BYD3_k127_3660185_6 Glycosyl hydrolase family 20, domain 2 K12373 - 3.2.1.52 1.279e-244 775.0
BYD3_k127_3660185_7 Subtilase family - - - 1.056e-232 748.0
BYD3_k127_3660185_8 AP endonuclease - - - 4.151e-212 661.0
BYD3_k127_3660185_9 PFAM Aminotransferase class I and II K00812,K14260 - 2.6.1.1,2.6.1.2,2.6.1.66 9.478e-209 654.0
BYD3_k127_3661238_0 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 0.0 1249.0
BYD3_k127_3661238_1 Fatty acid desaturase K00508 - 1.14.19.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 600.0
BYD3_k127_3661238_10 Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 345.0
BYD3_k127_3661238_11 Glycosyltransferase family 36 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006799 280.0
BYD3_k127_3661238_12 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002706 267.0
BYD3_k127_3661238_13 PFAM Bacterial regulatory helix-turn-helix proteins, AraC family - - - 0.00000000000000000000000000000000000000000000000000000000000000003236 227.0
BYD3_k127_3661238_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000005981 225.0
BYD3_k127_3661238_15 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000148 199.0
BYD3_k127_3661238_16 PAS fold - - - 0.0000000000000000000000000000000000000000000000000001055 195.0
BYD3_k127_3661238_17 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000001825 167.0
BYD3_k127_3661238_18 Endonuclease containing a URI domain K07461 - - 0.000000000000000000000000000000000006095 139.0
BYD3_k127_3661238_19 - - - - 0.00000000000000000000000002484 111.0
BYD3_k127_3661238_2 Alcohol dehydrogenase GroES domain protein K18369 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 568.0
BYD3_k127_3661238_20 - - - - 0.00000000000000233 77.0
BYD3_k127_3661238_21 - - - - 0.0000000000967 65.0
BYD3_k127_3661238_22 - - - - 0.00000001169 62.0
BYD3_k127_3661238_3 Lipid A 3-O-deacylase (PagL) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 451.0
BYD3_k127_3661238_4 response to stress - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 374.0
BYD3_k127_3661238_5 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 366.0
BYD3_k127_3661238_6 PFAM Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005665 364.0
BYD3_k127_3661238_7 response to stress - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 354.0
BYD3_k127_3661238_8 COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 350.0
BYD3_k127_3661238_9 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 351.0
BYD3_k127_3698673_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1346.0
BYD3_k127_3698673_1 Nlp p60 protein K13694,K13695 - 3.4.17.13 0.00000000000000000000000000000000000000000000000002472 187.0
BYD3_k127_3698673_2 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.0000000000000000000000000000000000000000000001547 173.0
BYD3_k127_3708583_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 2.02e-236 737.0
BYD3_k127_3708583_1 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 1.874e-195 617.0
BYD3_k127_3708583_10 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000002841 261.0
BYD3_k127_3708583_11 NADPH-dependent FMN reductase K19784 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000417 245.0
BYD3_k127_3708583_12 Pfam Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001355 222.0
BYD3_k127_3708583_13 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000008015 209.0
BYD3_k127_3708583_14 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000007393 185.0
BYD3_k127_3708583_15 - - - - 0.0000000000000000000000000000000000009373 146.0
BYD3_k127_3708583_16 OsmC-like protein K07397 - - 0.0000000000000000000000000008277 117.0
BYD3_k127_3708583_17 - - - - 0.000000000000000000009192 91.0
BYD3_k127_3708583_18 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000006119 60.0
BYD3_k127_3708583_2 PFAM Phosphoadenosine phosphosulfate reductase K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 527.0
BYD3_k127_3708583_3 Arylsulfotransferase Ig-like domain K01023 - 2.8.2.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 518.0
BYD3_k127_3708583_4 Domain of unknown function (DUF3943) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 483.0
BYD3_k127_3708583_5 Permease, YjgP YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005211 479.0
BYD3_k127_3708583_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008999 469.0
BYD3_k127_3708583_7 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 440.0
BYD3_k127_3708583_8 PFAM Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 409.0
BYD3_k127_3708583_9 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008924 345.0
BYD3_k127_3709550_0 TonB dependent receptor - - - 3.547e-234 746.0
BYD3_k127_3709550_1 seryl-tRNA synthetase K01875 - 6.1.1.11 8.681e-214 669.0
BYD3_k127_3709550_10 - - - - 0.00000000000000000000000000000000000000000000000000000001116 199.0
BYD3_k127_3709550_11 (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000006026 186.0
BYD3_k127_3709550_12 Putative heavy-metal-binding - - - 0.0000000000000000000000000000000000000000000959 162.0
BYD3_k127_3709550_13 Anti-sigma-K factor rskA - - - 0.000000000000000000000000000000000000793 149.0
BYD3_k127_3709550_14 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000001013 105.0
BYD3_k127_3709550_2 Protein of unknown function (DUF1501) - - - 2.891e-197 620.0
BYD3_k127_3709550_3 Protein of unknown function (DUF1800) - - - 4.561e-194 616.0
BYD3_k127_3709550_4 OPT oligopeptide transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579 604.0
BYD3_k127_3709550_5 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 596.0
BYD3_k127_3709550_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 302.0
BYD3_k127_3709550_7 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000000000009537 211.0
BYD3_k127_3709550_8 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000004023 218.0
BYD3_k127_3709550_9 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000002307 205.0
BYD3_k127_3717903_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 6.945e-295 914.0
BYD3_k127_3717903_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005667 593.0
BYD3_k127_3717903_2 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 554.0
BYD3_k127_3717903_3 Lamin Tail Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 560.0
BYD3_k127_3717903_4 PFAM pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005969 499.0
BYD3_k127_3717903_5 Oxidoreductase FAD-binding domain K02613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 425.0
BYD3_k127_3717903_6 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 334.0
BYD3_k127_3717903_7 TIGRFAM TIGR02453 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 317.0
BYD3_k127_3717903_8 Transcriptional regulator, TetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004906 256.0
BYD3_k127_3717903_9 GIY-YIG catalytic domain K07461 - - 0.000000000000000000000000003533 115.0
BYD3_k127_3727659_0 Sulfatase - - - 1.399e-203 644.0
BYD3_k127_3727659_1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 593.0
BYD3_k127_3727659_10 Domain of unknown function (DUF4382) - - - 0.0000000000000000000000000000000000000000000000000001429 198.0
BYD3_k127_3727659_11 - - - - 0.0000000000000000000000000000000000000005923 158.0
BYD3_k127_3727659_12 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000001251 136.0
BYD3_k127_3727659_13 self proteolysis - - - 0.0000000000000000000000001547 125.0
BYD3_k127_3727659_14 domain, Protein K13735 - - 0.00000000000001169 89.0
BYD3_k127_3727659_15 regulation of response to stimulus K01224 - 3.2.1.89 0.0000000000001769 76.0
BYD3_k127_3727659_2 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 593.0
BYD3_k127_3727659_3 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 567.0
BYD3_k127_3727659_4 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 550.0
BYD3_k127_3727659_6 adhesin AidA-related - - - 0.000000000000000000000000000000000000000000000000000000000000000000005318 268.0
BYD3_k127_3727659_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000002227 224.0
BYD3_k127_3727659_8 (GNAT) family K22441 - 2.3.1.57 0.00000000000000000000000000000000000000000000000000000000001465 210.0
BYD3_k127_3727659_9 - - - - 0.0000000000000000000000000000000000000000000000000000000003211 210.0
BYD3_k127_3740279_0 ASPIC and UnbV - - - 0.0 1455.0
BYD3_k127_3740279_1 ASPIC and UnbV - - - 0.0 1357.0
BYD3_k127_3740279_10 Nudix hydrolase K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 328.0
BYD3_k127_3740279_11 - - - - 0.00000000000000000000000000000000000000000000000000000005763 208.0
BYD3_k127_3740279_2 TonB-dependent receptor plug - - - 3.136e-310 979.0
BYD3_k127_3740279_3 Belongs to the glycosyl hydrolase 13 family - - - 1.327e-281 884.0
BYD3_k127_3740279_4 Maltogenic Amylase, C-terminal domain K01182,K05343 - 3.2.1.1,3.2.1.10,5.4.99.16 1.619e-245 770.0
BYD3_k127_3740279_5 Major Facilitator K16211 - - 1.975e-224 701.0
BYD3_k127_3740279_6 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 607.0
BYD3_k127_3740279_7 pfkB family carbohydrate kinase K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005789 488.0
BYD3_k127_3740279_8 Pfam:SusD K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009638 452.0
BYD3_k127_3740279_9 Glycogen debranching enzyme, glucanotransferase domain K05341 - 2.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 331.0
BYD3_k127_374286_0 Cysteine desulfurase K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 599.0
BYD3_k127_374286_1 Phage integrase, N-terminal SAM-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 413.0
BYD3_k127_374286_2 - - - - 0.0000000000000000000000000000000000000000000000000000000001165 207.0
BYD3_k127_376194_0 Oxidoreductase K00184 - - 0.0 1297.0
BYD3_k127_376194_1 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 0.0 1061.0
BYD3_k127_376194_10 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000576 457.0
BYD3_k127_376194_11 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008858 439.0
BYD3_k127_376194_12 Tricorn protease homolog - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008658 426.0
BYD3_k127_376194_13 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009847 431.0
BYD3_k127_376194_14 Phosphotriesterase family K07048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 424.0
BYD3_k127_376194_15 Quinol cytochrome c oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 313.0
BYD3_k127_376194_16 Collagen triple helix repeat (20 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 344.0
BYD3_k127_376194_17 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 292.0
BYD3_k127_376194_18 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009653 286.0
BYD3_k127_376194_19 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000001529 247.0
BYD3_k127_376194_2 PFAM Polysulphide reductase, NrfD K00185 - - 6.113e-284 875.0
BYD3_k127_376194_20 cytochrome C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003191 244.0
BYD3_k127_376194_21 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000436 239.0
BYD3_k127_376194_22 - - - - 0.000000000000000000000000000000000000000000000000000000002683 208.0
BYD3_k127_376194_23 Hep Hag repeat protein K12056 - - 0.0000000000000000000000000000000000000000000000000000001719 223.0
BYD3_k127_376194_24 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000001195 192.0
BYD3_k127_376194_25 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000009609 159.0
BYD3_k127_376194_26 PFAM membrane protein of K08972 - - 0.000000000000000000000000000000004434 131.0
BYD3_k127_376194_27 Protein of unknown function (DUF2892) - - - 0.000000000000000000000473 96.0
BYD3_k127_376194_29 Major facilitator Superfamily - - - 0.0000000000000000004198 89.0
BYD3_k127_376194_3 Radical SAM K11784 - 1.21.98.1 3.721e-223 694.0
BYD3_k127_376194_4 Peptidase M16 K07263 - - 1.598e-206 648.0
BYD3_k127_376194_5 Peptidase M16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 596.0
BYD3_k127_376194_6 Quinol cytochrome c oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 546.0
BYD3_k127_376194_7 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 491.0
BYD3_k127_376194_8 PFAM Cytochrome c, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009717 492.0
BYD3_k127_376194_9 Aspartyl protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 464.0
BYD3_k127_37783_0 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 385.0
BYD3_k127_37783_1 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009762 271.0
BYD3_k127_3779590_0 oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 373.0
BYD3_k127_3779590_1 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005801 332.0
BYD3_k127_3779590_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009712 304.0
BYD3_k127_3779590_3 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002917 277.0
BYD3_k127_3779590_4 Protein of unknown function (DUF420) K08976 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003366 247.0
BYD3_k127_3779590_5 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000482 247.0
BYD3_k127_3779590_6 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K07443 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000006815 188.0
BYD3_k127_3779590_7 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.00000000000000000000000000000000000000000000001841 174.0
BYD3_k127_3779590_8 - - - - 0.0000000000000000003612 88.0
BYD3_k127_379439_0 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003614 258.0
BYD3_k127_379439_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008754 265.0
BYD3_k127_379439_2 PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - 0.000006696 52.0
BYD3_k127_3811008_0 Outer membrane protein beta-barrel family - - - 2.319e-210 681.0
BYD3_k127_3811008_1 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007102 607.0
BYD3_k127_3811008_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000003429 165.0
BYD3_k127_3811008_3 Protein of unknown function (DUF1211) - - - 0.0000000000000000000002305 105.0
BYD3_k127_3859068_0 PFAM Sulfatase K01130 - 3.1.6.1 0.0 1205.0
BYD3_k127_3859068_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005298 261.0
BYD3_k127_3859068_2 Protein of unknown function (DUF3575) - - - 0.0000000000000000000000000000000000000000000000000000000000006065 218.0
BYD3_k127_3859068_3 - - - - 0.000000000000000000005194 96.0
BYD3_k127_3911092_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1314.0
BYD3_k127_3911092_1 peptidase M42 - - - 1.46e-201 633.0
BYD3_k127_3911092_10 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000009219 257.0
BYD3_k127_3911092_12 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000007971 207.0
BYD3_k127_3911092_13 - - - - 0.00000000000000000000000000000000000000000001516 168.0
BYD3_k127_3911092_14 S23 ribosomal protein - - - 0.0000000000000000000000000000000000000002372 152.0
BYD3_k127_3911092_16 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000728 66.0
BYD3_k127_3911092_17 PFAM Resolvase, N-terminal - - - 0.00002287 46.0
BYD3_k127_3911092_18 META domain K03668 - - 0.0003204 50.0
BYD3_k127_3911092_2 DNA mismatch repair protein MutT K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 523.0
BYD3_k127_3911092_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 486.0
BYD3_k127_3911092_4 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 457.0
BYD3_k127_3911092_5 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 428.0
BYD3_k127_3911092_6 PFAM Aminoglycoside phosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 417.0
BYD3_k127_3911092_7 penicillin-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 414.0
BYD3_k127_3911092_8 Acyl-protein synthetase, LuxE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 392.0
BYD3_k127_3911092_9 Belongs to the UPF0173 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 338.0
BYD3_k127_3913657_0 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 356.0
BYD3_k127_3913657_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 338.0
BYD3_k127_3913657_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 335.0
BYD3_k127_3913657_3 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000002172 111.0
BYD3_k127_3932504_0 TonB-dependent receptor K02014 - - 4.566e-232 737.0
BYD3_k127_3932504_1 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 570.0
BYD3_k127_3932504_2 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000838 521.0
BYD3_k127_3932504_3 Biotin-lipoyl like K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 516.0
BYD3_k127_3932504_4 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005267 504.0
BYD3_k127_3932504_5 outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005334 421.0
BYD3_k127_3932504_6 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 367.0
BYD3_k127_3932504_7 Outer membrane cobalamin receptor protein K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000006264 234.0
BYD3_k127_3936160_0 GAF domain K03406 - - 0.0 3386.0
BYD3_k127_3936160_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0 1021.0
BYD3_k127_3936160_10 Formamidopyrimidine-DNA glycosylase H2TH domain K05522 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 295.0
BYD3_k127_3936160_11 Domain of unknown function (DUF892) - - - 0.000000000000000000000000000000000000000000000000000000000000000000009339 239.0
BYD3_k127_3936160_12 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000007797 236.0
BYD3_k127_3936160_13 Domain of unknown function (DUF4136) - - - 0.00000000000000000000000000000000000000000000000000000000005046 210.0
BYD3_k127_3936160_14 Domain of unknown function (DUF2383) - - - 0.0000000000000000000000000000000000004988 144.0
BYD3_k127_3936160_15 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.0000000000000000000000000000000000129 141.0
BYD3_k127_3936160_16 Domain of unknown function (DUF4142) K08995 - - 0.000000000000000000000000000000002429 136.0
BYD3_k127_3936160_17 cheY-homologous receiver domain - - - 0.00000000000000000000000000001317 122.0
BYD3_k127_3936160_18 phosphorelay signal transduction system - - - 0.000000000000000000000000007517 114.0
BYD3_k127_3936160_19 phosphorelay signal transduction system - - - 0.00000000000000000000000009949 110.0
BYD3_k127_3936160_2 PFAM FAD dependent oxidoreductase - - - 6.887e-194 617.0
BYD3_k127_3936160_20 - - - - 0.0000000000000000001235 89.0
BYD3_k127_3936160_21 - - - - 0.000000000000000008861 84.0
BYD3_k127_3936160_22 Protein of unknown function DUF72 - - - 0.0000000000000006549 78.0
BYD3_k127_3936160_24 Putative beta-lactamase-inhibitor-like, PepSY-like - - - 0.000008595 55.0
BYD3_k127_3936160_25 Protein of unknown function (DUF1328) - - - 0.00001506 49.0
BYD3_k127_3936160_26 Protein of unknown function DUF72 - - - 0.00001884 48.0
BYD3_k127_3936160_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000072 499.0
BYD3_k127_3936160_4 two component, sigma54 specific, transcriptional regulator, Fis family K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 438.0
BYD3_k127_3936160_5 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 417.0
BYD3_k127_3936160_6 Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 379.0
BYD3_k127_3936160_7 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000863 368.0
BYD3_k127_3936160_8 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 362.0
BYD3_k127_3936160_9 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005837 340.0
BYD3_k127_393809_0 Trehalose utilisation K09992 - - 1.33e-311 969.0
BYD3_k127_393809_1 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 467.0
BYD3_k127_393809_2 acr, cog1678 K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 290.0
BYD3_k127_393809_3 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000996 275.0
BYD3_k127_393809_4 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000002309 213.0
BYD3_k127_393809_5 Transmembrane family 220, helix - - - 0.000000000000000000000000000000000000000000000001608 176.0
BYD3_k127_3941147_0 Proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 4.711e-272 851.0
BYD3_k127_3941147_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 1.415e-233 731.0
BYD3_k127_3941147_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000004314 248.0
BYD3_k127_3941147_3 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000268 209.0
BYD3_k127_3941147_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000001135 186.0
BYD3_k127_3941147_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000000000008848 172.0
BYD3_k127_3941287_0 TonB-dependent Receptor Plug - - - 0.0 1364.0
BYD3_k127_3941287_1 OmpA MotB domain protein - - - 3.441e-212 677.0
BYD3_k127_3941287_2 metallopeptidase activity - - - 1.205e-211 685.0
BYD3_k127_3941287_3 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 508.0
BYD3_k127_3941287_4 protein CHP03519, membrane, Bacteroidetes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 456.0
BYD3_k127_3941287_5 PFAM FecR protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 377.0
BYD3_k127_3941287_6 PFAM RagB SusD domain protein K21572 GO:0000272,GO:0001871,GO:0003674,GO:0005488,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0016052,GO:0030246,GO:0030247,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 350.0
BYD3_k127_3941287_7 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000003631 173.0
BYD3_k127_3950142_0 CarboxypepD_reg-like domain - - - 0.0 1583.0
BYD3_k127_3950142_1 Peptidase family M1 domain - - - 0.0 1236.0
BYD3_k127_3950142_10 COGs COG1253 Hemolysins and related protein containing CBS domains K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007348 361.0
BYD3_k127_3950142_11 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006035 263.0
BYD3_k127_3950142_12 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000003553 226.0
BYD3_k127_3950142_13 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000001463 222.0
BYD3_k127_3950142_14 Protein of unknown function (DUF3788) - - - 0.00000000000000000000000000000000000000000002357 166.0
BYD3_k127_3950142_15 - - - - 0.0000000000000000000000000000000000000000001368 166.0
BYD3_k127_3950142_16 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000001493 158.0
BYD3_k127_3950142_2 Peptidase family M1 domain - - - 0.0 1114.0
BYD3_k127_3950142_3 Sortilin, neurotensin receptor 3, - - - 0.0 1057.0
BYD3_k127_3950142_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 5.184e-236 737.0
BYD3_k127_3950142_5 radical SAM domain protein - - - 2.95e-228 717.0
BYD3_k127_3950142_6 Starch-binding associating with outer membrane - - - 2.088e-222 698.0
BYD3_k127_3950142_7 acetyl-CoA hydrolase - - - 1.465e-221 692.0
BYD3_k127_3950142_8 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.836e-212 664.0
BYD3_k127_3950142_9 Belongs to the CarA family K01956 - 6.3.5.5 3.396e-195 614.0
BYD3_k127_3958116_0 COGs COG1033 exporter of the RND superfamily protein K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004716 310.0
BYD3_k127_3958116_1 Peptidase family U32 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000783 251.0
BYD3_k127_3958116_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000002769 119.0
BYD3_k127_3994145_0 TonB dependent receptor K02014 - - 0.0 1250.0
BYD3_k127_3994145_1 Nitrite and sulphite reductase 4Fe-4S K00392 - 1.8.7.1 4.443e-301 937.0
BYD3_k127_3994145_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 541.0
BYD3_k127_3994145_11 Sirohaem biosynthesis protein central K02304,K07090 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 527.0
BYD3_k127_3994145_12 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 441.0
BYD3_k127_3994145_13 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000581 424.0
BYD3_k127_3994145_14 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 416.0
BYD3_k127_3994145_15 SusD family K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 423.0
BYD3_k127_3994145_16 5-aminolevulinic acid synthase K00643 - 2.3.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 395.0
BYD3_k127_3994145_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 362.0
BYD3_k127_3994145_18 Von Willebrand factor A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 355.0
BYD3_k127_3994145_19 Pseudouridine synthase K06179,K06180 - 5.4.99.23,5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 314.0
BYD3_k127_3994145_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335,K18331 - 1.12.1.3,1.6.5.3 1.546e-267 827.0
BYD3_k127_3994145_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004231 304.0
BYD3_k127_3994145_21 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 301.0
BYD3_k127_3994145_22 PFAM Tetratricopeptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007862 321.0
BYD3_k127_3994145_23 ABC-type phosphate transport system periplasmic K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 306.0
BYD3_k127_3994145_24 NADH-quinone oxidoreductase, E subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 284.0
BYD3_k127_3994145_25 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000492 263.0
BYD3_k127_3994145_26 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000001319 230.0
BYD3_k127_3994145_27 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000000000000000000002497 230.0
BYD3_k127_3994145_28 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000000000000001337 214.0
BYD3_k127_3994145_29 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000006927 216.0
BYD3_k127_3994145_3 TonB-linked outer membrane protein, SusC RagA family - - - 4.436e-266 852.0
BYD3_k127_3994145_30 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000004894 201.0
BYD3_k127_3994145_31 guanyl-nucleotide exchange factor activity - - - 0.0000000000000000000000000000000000000000000001443 192.0
BYD3_k127_3994145_32 START domain - - - 0.00000000000000000000000000000000000000000000021 174.0
BYD3_k127_3994145_33 - - - - 0.0000000000000000000000000000000000000000000025 168.0
BYD3_k127_3994145_34 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.0000000000000000000000000000000000000000001112 179.0
BYD3_k127_3994145_35 DinB superfamily - - - 0.000000000000000000000000000000000000000001161 161.0
BYD3_k127_3994145_36 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000004763 123.0
BYD3_k127_3994145_38 - - - - 0.00000000000002193 78.0
BYD3_k127_3994145_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 3.316e-244 757.0
BYD3_k127_3994145_40 ATP-independent chaperone mediated protein folding - - - 0.00000000006684 71.0
BYD3_k127_3994145_41 SPTR Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000002079 57.0
BYD3_k127_3994145_5 Histidyl-tRNA synthetase K01892 - 6.1.1.21 1.931e-213 670.0
BYD3_k127_3994145_6 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 1.205e-201 631.0
BYD3_k127_3994145_7 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 578.0
BYD3_k127_3994145_8 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003732 576.0
BYD3_k127_3994145_9 PFAM Uncharacterised protein family UPF0324 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 556.0
BYD3_k127_4029939_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 5.534e-238 741.0
BYD3_k127_4029939_1 PFAM RNA polymerase sigma-70 region 2 K03088 - - 7.771e-202 634.0
BYD3_k127_4029939_10 PFAM Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000000000000000000004659 228.0
BYD3_k127_4029939_11 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000003009 201.0
BYD3_k127_4029939_12 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000009929 197.0
BYD3_k127_4029939_13 Colicin V production protein K03558 - - 0.000000000000000000000000000000000000000000000000009361 186.0
BYD3_k127_4029939_14 TIGRFAM Gliding motility-associated protein, GldC - - - 0.000000000000000000000000000000000000000000003374 166.0
BYD3_k127_4029939_2 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 518.0
BYD3_k127_4029939_3 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000892 455.0
BYD3_k127_4029939_4 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 436.0
BYD3_k127_4029939_5 Domain of unknown function (DUF4290) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 346.0
BYD3_k127_4029939_6 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 296.0
BYD3_k127_4029939_7 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004193 268.0
BYD3_k127_4029939_8 SMI1 / KNR4 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002853 235.0
BYD3_k127_4029939_9 Domain of unknown function (DUF5117) - - - 0.000000000000000000000000000000000000000000000000000000000000000000293 234.0
BYD3_k127_4030170_0 PFAM Uncharacterised BCR, COG1649 - - - 0.00000000000000000000000000000000000000000000000000004796 211.0
BYD3_k127_4030170_1 - - - - 0.0000000000000002439 92.0
BYD3_k127_4030170_2 Tim44 K15539 - - 0.0002773 49.0
BYD3_k127_4030170_3 Belongs to the peptidase S8 family - - - 0.0006683 53.0
BYD3_k127_4103739_0 TIGRFAM TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region - - - 0.0 1507.0
BYD3_k127_4103739_1 PFAM Glycosyl hydrolase family 3 C terminal domain K05349 - 3.2.1.21 0.0 1331.0
BYD3_k127_4103739_10 WD40-like Beta Propeller Repeat K03641 - - 2.447e-252 786.0
BYD3_k127_4103739_11 ABC transporter K18889 - - 2.746e-252 791.0
BYD3_k127_4103739_12 Alpha-L-arabinofuranosidase C-terminus K01209 - 3.2.1.55 9.112e-244 761.0
BYD3_k127_4103739_13 Oxidoreductase family, NAD-binding Rossmann fold - - - 2.078e-239 746.0
BYD3_k127_4103739_14 Catalyzes the dehydration of D-mannonate K01686 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008198,GO:0008927,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019585,GO:0019752,GO:0030145,GO:0032787,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0071704,GO:0072329,GO:1901575 4.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000648 590.0
BYD3_k127_4103739_15 COGs COG0673 dehydrogenase and related protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 587.0
BYD3_k127_4103739_16 Belongs to the glycosyl hydrolase 43 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 569.0
BYD3_k127_4103739_17 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 605.0
BYD3_k127_4103739_18 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000765 554.0
BYD3_k127_4103739_19 helix_turn _helix lactose operon repressor K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 473.0
BYD3_k127_4103739_2 Glycosyl hydrolase family 115 - - - 0.0 1193.0
BYD3_k127_4103739_20 Threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595 451.0
BYD3_k127_4103739_21 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 443.0
BYD3_k127_4103739_22 Methane oxygenase PmoA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 404.0
BYD3_k127_4103739_23 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 395.0
BYD3_k127_4103739_24 Sugar nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 381.0
BYD3_k127_4103739_25 SMART glycoside hydrolase family 10 K01181 - 3.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 377.0
BYD3_k127_4103739_26 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00046 - 1.1.1.69 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 354.0
BYD3_k127_4103739_27 pfam nipsnap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004982 290.0
BYD3_k127_4103739_28 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006047 257.0
BYD3_k127_4103739_29 Cupin domain K14977 - 3.5.3.26 0.000000000000000000000000000000000000000000000000000000000000000000002895 244.0
BYD3_k127_4103739_3 PFAM RagB SusD K21572 - - 0.0 1022.0
BYD3_k127_4103739_30 PFAM Pregnancy-associated plasma protein-A - - - 0.000000000000000000000000000000000000000000000000000000000000000001049 261.0
BYD3_k127_4103739_31 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000004363 237.0
BYD3_k127_4103739_32 SMART PUR-alpha beta gamma DNA RNA-binding - - - 0.0000000000000000000000000000000000000000000000000000004856 196.0
BYD3_k127_4103739_33 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000003471 189.0
BYD3_k127_4103739_34 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000002445 190.0
BYD3_k127_4103739_35 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000005946 183.0
BYD3_k127_4103739_36 IMP dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000007544 184.0
BYD3_k127_4103739_37 Belongs to the glycosyl hydrolase 2 family K05970 - 3.1.1.53 0.000000000000000000000000000000000000000000000000008601 183.0
BYD3_k127_4103739_38 Protein of Unknown function (DUF2784) - - - 0.0000000000000000000000000000000000000000000000005215 178.0
BYD3_k127_4103739_39 Ribosomal protein L31 K02909 - - 0.000000000000000000000000000000000000000002427 157.0
BYD3_k127_4103739_4 Belongs to the glycosyl hydrolase 67 family K01235 - 3.2.1.139 1.14e-311 970.0
BYD3_k127_4103739_40 - - - - 0.000000000000000000000000000000000000001797 157.0
BYD3_k127_4103739_41 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000001826 131.0
BYD3_k127_4103739_42 Acyl-coA-binding protein - - - 0.0000000000000000000000000000004147 124.0
BYD3_k127_4103739_43 - - - - 0.00000000000000001014 89.0
BYD3_k127_4103739_44 - - - - 0.00000000000000007083 87.0
BYD3_k127_4103739_45 VanZ like family - - - 0.0000000000000002202 87.0
BYD3_k127_4103739_46 Late embryogenesis abundant protein - - - 0.000000000000072 78.0
BYD3_k127_4103739_47 Cytochrome c - - - 0.0000000000001811 75.0
BYD3_k127_4103739_48 - - - - 0.0000000000006878 70.0
BYD3_k127_4103739_49 PFAM Methyltransferase type 11 - - - 0.000000000005865 77.0
BYD3_k127_4103739_5 Belongs to the GPI family K01810 - 5.3.1.9 5.631e-282 874.0
BYD3_k127_4103739_50 Domain of unknown function (DUF4476) - - - 0.0000000002393 73.0
BYD3_k127_4103739_51 - - - - 0.00000001172 63.0
BYD3_k127_4103739_52 Polysaccharide biosynthesis protein - - - 0.000001231 61.0
BYD3_k127_4103739_53 - - - - 0.0001491 49.0
BYD3_k127_4103739_6 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 1.059e-274 854.0
BYD3_k127_4103739_7 TonB-dependent receptor - - - 2.336e-270 854.0
BYD3_k127_4103739_8 TonB-dependent receptor - - - 4.122e-256 815.0
BYD3_k127_4103739_9 Belongs to the xylose isomerase family K01805 - 5.3.1.5 6.068e-254 787.0
BYD3_k127_410625_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005551 597.0
BYD3_k127_410625_1 prohibitin homologues - - - 0.000000000000000000007423 92.0
BYD3_k127_410625_2 - - - - 0.00000000000001695 83.0
BYD3_k127_4131671_0 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000000000000000000000000000000000507 257.0
BYD3_k127_4131671_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000001088 229.0
BYD3_k127_4131671_2 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000107 207.0
BYD3_k127_4131671_3 - - - - 0.000000061 64.0
BYD3_k127_414402_0 KaiC K08482 - - 1.711e-229 721.0
BYD3_k127_414402_1 protein histidine kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004745 382.0
BYD3_k127_414402_2 FR47-like protein - - - 0.000000000000000000000000000000000000000000000003623 178.0
BYD3_k127_414402_3 KaiB K08481 - - 0.00000000000000000000000000000000000000000001375 163.0
BYD3_k127_414402_4 KaiB K08481 - - 0.0000000000000000000000000006633 116.0
BYD3_k127_419855_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 1.297e-208 655.0
BYD3_k127_419855_1 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000633 362.0
BYD3_k127_419855_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000001445 255.0
BYD3_k127_421725_1 Uncharacterized protein family, UPF0114 - - - 0.00000000000000000000000000005805 121.0
BYD3_k127_421725_2 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000012 104.0
BYD3_k127_421725_3 Sulfatase K01130 - 3.1.6.1 0.000000000000000000000001647 104.0
BYD3_k127_421725_4 Tetratricopeptide repeat - - - 0.000877 44.0
BYD3_k127_4253694_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004171 327.0
BYD3_k127_4253694_1 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004908 290.0
BYD3_k127_4253694_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000000000000000322 242.0
BYD3_k127_4253694_3 Oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000005361 154.0
BYD3_k127_4253694_4 - - - - 0.0000228 50.0
BYD3_k127_4272597_0 SPTR ASPIC UnbV domain protein - - - 0.0 1522.0
BYD3_k127_4272597_1 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.0 1196.0
BYD3_k127_4272597_10 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005831 280.0
BYD3_k127_4272597_11 uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005251 267.0
BYD3_k127_4272597_12 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000003533 263.0
BYD3_k127_4272597_13 Belongs to the Nudix hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002435 251.0
BYD3_k127_4272597_14 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000003548 217.0
BYD3_k127_4272597_15 Linear amide C-N hydrolases, choloylglycine hydrolase family K01442 - 3.5.1.24 0.000000000000000000000000000000000000000000000000000000000001557 222.0
BYD3_k127_4272597_16 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000000000000000000000000000000002414 229.0
BYD3_k127_4272597_17 Transcriptional repressor, CopY family - - - 0.000000000000000000000000000000000000000000000000000000003809 201.0
BYD3_k127_4272597_18 Fibronectin type III domain protein - - - 0.00000000000000000000000000000000000000000000000000000013 220.0
BYD3_k127_4272597_19 - - - - 0.000000000000000000000000000000000000000000000000000006408 196.0
BYD3_k127_4272597_2 PFAM TonB-dependent Receptor Plug - - - 0.0 1146.0
BYD3_k127_4272597_20 - - - - 0.0000000000000000000000000000000000000000000000000000438 212.0
BYD3_k127_4272597_21 protein possibly involved in aromatic compounds catabolism K19222 - 3.1.2.28 0.0000000000000000000000000000000000000000000000000002684 188.0
BYD3_k127_4272597_22 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000002126 182.0
BYD3_k127_4272597_23 CHY zinc finger - - - 0.000000000000000000000000000000000000000000000000454 176.0
BYD3_k127_4272597_24 mercury ion transmembrane transporter activity K08364 - - 0.00000000000000000000000000000008603 128.0
BYD3_k127_4272597_25 - - - - 0.000000000000000000000000004529 115.0
BYD3_k127_4272597_26 - - - - 0.00000000000000002745 87.0
BYD3_k127_4272597_27 - - - - 0.00009516 52.0
BYD3_k127_4272597_3 PFAM PKD domain - - - 0.0 1065.0
BYD3_k127_4272597_4 Belongs to the aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 3.256e-310 955.0
BYD3_k127_4272597_5 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 532.0
BYD3_k127_4272597_6 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007892 489.0
BYD3_k127_4272597_7 PFAM RagB SusD K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 447.0
BYD3_k127_4272597_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 439.0
BYD3_k127_4272597_9 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762,K13421 - 2.4.2.10,4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 337.0
BYD3_k127_4273346_0 Glycosyl hydrolase family 32 K03332 - 3.2.1.80 4.856e-220 692.0
BYD3_k127_4273346_1 Oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 467.0
BYD3_k127_4273346_2 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000000000000000002124 215.0
BYD3_k127_4273346_3 - - - - 0.000000000000000000000000000000000000000000000000000001111 199.0
BYD3_k127_4273346_4 Protein of unknown function (DUF1328) - - - 0.0000000000000000477 81.0
BYD3_k127_4273346_6 Gas vesicle protein - - - 0.0000001558 56.0
BYD3_k127_4276461_0 Outer membrane protein beta-barrel family - - - 8.577e-242 765.0
BYD3_k127_4285921_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 2.02e-207 651.0
BYD3_k127_4285921_1 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008043 339.0
BYD3_k127_4297003_0 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001237 274.0
BYD3_k127_4297003_1 PFAM Major Facilitator Superfamily K08156 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001071 264.0
BYD3_k127_4297003_2 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000003992 225.0
BYD3_k127_4297003_3 Protein of unknown function (DUF1223) - - - 0.00000000000000000000000000000000000000000000000000002389 196.0
BYD3_k127_4321785_0 Phage integrase, N-terminal SAM-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 307.0
BYD3_k127_4321785_1 - - - - 0.000000000000000000001281 104.0
BYD3_k127_4321785_2 Helix-turn-helix domain - - - 0.00000004114 58.0
BYD3_k127_4321785_3 genomic island protein Bartonella henselae str. Houston-1 gi 49238468 emb CAF27697.1 - - - 0.0006171 45.0
BYD3_k127_4332206_0 TonB-dependent receptor plug K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 629.0
BYD3_k127_4332206_1 Response regulator of the LytR AlgR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001874 279.0
BYD3_k127_4332206_2 - - - - 0.000000001667 58.0
BYD3_k127_434316_0 Protein of unknown function (DUF1549) - - - 0.0 1093.0
BYD3_k127_434316_1 Protein of unknown function (DUF1501) - - - 2.222e-270 837.0
BYD3_k127_434316_2 Chitobiase/beta-hexosaminidase C-terminal domain - - - 4.076e-223 712.0
BYD3_k127_434316_3 NHL repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001548 283.0
BYD3_k127_434316_4 Protein of unknown function (DUF2480) - - - 0.000000000000000000000000000000000000000000000000000000000000000004616 230.0
BYD3_k127_434316_5 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.0000000000000000000000000000004436 131.0
BYD3_k127_4379582_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007856 271.0
BYD3_k127_4379582_1 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000002338 229.0
BYD3_k127_4390150_0 Glycosyltransferase like family 2 K17250 - 2.4.1.293 0.0000000000000000000000000000000000000000000000000000000000003336 221.0
BYD3_k127_4390150_1 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000008034 130.0
BYD3_k127_43967_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1789.0
BYD3_k127_43967_1 TonB dependent receptor K16091 - - 0.0 1259.0
BYD3_k127_43967_10 iron-regulated protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 302.0
BYD3_k127_43967_11 PhoD-like phosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 299.0
BYD3_k127_43967_12 TIGRFAM Gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 286.0
BYD3_k127_43967_13 Molecular chaperone DnaK - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003235 260.0
BYD3_k127_43967_14 HmuY protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002665 255.0
BYD3_k127_43967_15 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006324 247.0
BYD3_k127_43967_16 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000000000000000001407 216.0
BYD3_k127_43967_17 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000000000002605 213.0
BYD3_k127_43967_19 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000001324 206.0
BYD3_k127_43967_2 PFAM TonB-dependent Receptor Plug K02014,K16089 - - 2.091e-283 887.0
BYD3_k127_43967_21 PFAM ABC transporter K02193 - 3.6.3.41 0.000000000000000000000000000000000000000001834 163.0
BYD3_k127_43967_22 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000000004639 146.0
BYD3_k127_43967_23 - - - - 0.000000000003384 70.0
BYD3_k127_43967_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 3.365e-240 745.0
BYD3_k127_43967_4 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 3.495e-233 726.0
BYD3_k127_43967_5 alanine dehydrogenase K00259 - 1.4.1.1 1.374e-212 663.0
BYD3_k127_43967_6 TonB dependent receptor K16089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 540.0
BYD3_k127_43967_7 transcriptional regulator (AraC family) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 487.0
BYD3_k127_43967_8 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 468.0
BYD3_k127_43967_9 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 362.0
BYD3_k127_4398270_0 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 466.0
BYD3_k127_4398270_1 cellulose binding K12132,K15125,K21449 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 391.0
BYD3_k127_4398270_2 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 314.0
BYD3_k127_4398270_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000004117 195.0
BYD3_k127_4398270_4 pathogenesis - - - 0.0000000000000000000000000000000000000000000000000153 209.0
BYD3_k127_442346_0 COGs COG1914 Mn2 and Fe2 transporter of the NRAMP family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009557 492.0
BYD3_k127_442346_1 Domain of unknown function (DUF4920) - - - 0.00000000000000000000000000000000368 134.0
BYD3_k127_442346_2 Belongs to the UPF0271 (lamB) family K07160 - - 0.0000000001709 61.0
BYD3_k127_442346_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000003237 61.0
BYD3_k127_4451836_0 Involved in the tonB-independent uptake of proteins - - - 1.364e-273 871.0
BYD3_k127_4451836_1 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 464.0
BYD3_k127_4451836_2 - - - - 0.00000000000000000000000000000000000000000000000000000002338 201.0
BYD3_k127_4451836_3 - - - - 0.00000000000000000000000000000000000000000000007978 176.0
BYD3_k127_4518689_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 287.0
BYD3_k127_4518689_1 Sodium:sulfate symporter transmembrane region K14445 - - 0.0000000000000000000000000000000000000000698 153.0
BYD3_k127_4518689_2 Domain of unknown function (DUF202) K00389 - - 0.000001277 56.0
BYD3_k127_4537498_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 461.0
BYD3_k127_4537498_1 photosystem II stabilization - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 308.0
BYD3_k127_4537498_2 Psort location OuterMembrane, score - - - 0.0000000000000004687 80.0
BYD3_k127_457221_0 Transglutaminase-like superfamily - - - 0.0 1114.0
BYD3_k127_457221_1 Permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004947 357.0
BYD3_k127_457221_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006955 268.0
BYD3_k127_457221_3 - - - - 0.000000000000001102 88.0
BYD3_k127_4589370_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 2.725e-239 750.0
BYD3_k127_4589370_1 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 420.0
BYD3_k127_4589370_2 Protein of unknown function (DUF559) - - - 0.000000000000000000000000000000578 125.0
BYD3_k127_4605179_0 COG NOG10142 non supervised orthologous group - - - 2.498e-196 618.0
BYD3_k127_4605179_1 Belongs to the glutaminase family K01425 GO:0003674,GO:0003824,GO:0004359,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006543,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009987,GO:0016053,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 3.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 497.0
BYD3_k127_4605179_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008139 416.0
BYD3_k127_4605179_3 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 301.0
BYD3_k127_4605179_4 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007141 248.0
BYD3_k127_4605179_5 Protein of unknown function (DUF3575) - - - 0.000000000000000000000000000000000000000000000000000000000000004285 224.0
BYD3_k127_4605179_6 - - - - 0.0000000000000000000000000000000000000000000005205 175.0
BYD3_k127_4605179_7 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000007885 124.0
BYD3_k127_4605179_8 - - - - 0.0000000000000000000000000383 125.0
BYD3_k127_4605179_9 - - - - 0.00000002471 63.0
BYD3_k127_4645214_0 Belongs to the IlvD Edd family - - - 0.0 1002.0
BYD3_k127_4645214_1 GntP family permease K06155 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004018 506.0
BYD3_k127_4645214_2 COGs COG3970 Fumarylacetoacetate (FAA) hydrolase family protein K14259 - 4.2.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004502 396.0
BYD3_k127_4645214_3 Putative esterase K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000552 391.0
BYD3_k127_4645214_4 PFAM SMP-30 Gluconolaconase K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 367.0
BYD3_k127_4645214_5 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009255 342.0
BYD3_k127_4645214_6 Outer membrane cobalamin receptor protein K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000009056 241.0
BYD3_k127_4645214_7 - - - - 0.000000000000000000000000001884 115.0
BYD3_k127_4645214_8 Cysteine-rich CWC - - - 0.000000000000000002093 86.0
BYD3_k127_4671002_0 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 330.0
BYD3_k127_4671002_1 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000005798 226.0
BYD3_k127_4671002_2 Domain of unknown function (DUF4136) - - - 0.000002895 52.0
BYD3_k127_46856_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 7.776e-270 842.0
BYD3_k127_46856_1 TIGRFAM gliding motility associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 318.0
BYD3_k127_4688809_0 Predicted membrane protein (DUF2339) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 500.0
BYD3_k127_4688809_1 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 317.0
BYD3_k127_4688809_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004026 284.0
BYD3_k127_4688809_3 Domain of unknown function (DUF4286) - - - 0.000000000000000000000000000000000007866 138.0
BYD3_k127_4688809_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000007381 120.0
BYD3_k127_4707566_0 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006138 452.0
BYD3_k127_4707566_1 Rifampin ADP-ribosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 419.0
BYD3_k127_4707566_2 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005072 268.0
BYD3_k127_4707566_3 Cation transport regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002921 244.0
BYD3_k127_4707566_4 LytTr DNA-binding domain - - - 0.00000004045 55.0
BYD3_k127_4719962_0 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000398 252.0
BYD3_k127_4719962_1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000001839 75.0
BYD3_k127_4719962_2 AAA ATPase domain K12132 - 2.7.11.1 0.00003601 55.0
BYD3_k127_472830_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 1.195e-195 614.0
BYD3_k127_472830_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 468.0
BYD3_k127_472830_10 Histidine kinase - - - 0.00000000000000000000000000000000000000000005628 163.0
BYD3_k127_472830_11 Outer membrane protein beta-barrel family - - - 0.00000000000000000000000000000000000001143 148.0
BYD3_k127_472830_13 Amidohydrolase family - - - 0.0000000000000000004768 90.0
BYD3_k127_472830_16 - - - - 0.000000005469 64.0
BYD3_k127_472830_17 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000004978 53.0
BYD3_k127_472830_2 Metal-dependent hydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 445.0
BYD3_k127_472830_3 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 432.0
BYD3_k127_472830_4 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 331.0
BYD3_k127_472830_5 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 301.0
BYD3_k127_472830_6 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000495 255.0
BYD3_k127_472830_7 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000001166 237.0
BYD3_k127_472830_8 Putative FMN-binding domain K07734 - - 0.000000000000000000000000000000000000000000000000000000000000000004517 231.0
BYD3_k127_472830_9 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000003863 190.0
BYD3_k127_4737700_0 PFAM Penicillin binding protein transpeptidase domain K05366 - 2.4.1.129,3.4.16.4 0.0 1077.0
BYD3_k127_4737700_1 DNA segregation ATPase FtsK SpoIIIE and related K03466 - - 1.978e-278 868.0
BYD3_k127_4737700_10 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 381.0
BYD3_k127_4737700_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008298 332.0
BYD3_k127_4737700_12 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 289.0
BYD3_k127_4737700_13 PFAM SprT-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002225 269.0
BYD3_k127_4737700_14 AsnC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002575 250.0
BYD3_k127_4737700_15 GAF domain-containing protein K08968 - 1.8.4.14 0.0000000000000000000000000000000000000000000000000000000000000000000000003222 250.0
BYD3_k127_4737700_16 Acetyltransferase (GNAT) domain K03828 - - 0.0000000000000000000000000000000000000000000000000000000000000002058 224.0
BYD3_k127_4737700_17 outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000000000000000000000000000000000000000000000000000000000000002207 227.0
BYD3_k127_4737700_18 Domain of unknown function (DUF1905) - - - 0.00000000000000000000000000000000000000000000000000000000001401 210.0
BYD3_k127_4737700_19 Protein of unknown function, DUF255 - - - 0.000000000000000000000000000000000000000000000004291 178.0
BYD3_k127_4737700_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 1.133e-270 835.0
BYD3_k127_4737700_20 Heavy-metal-associated domain - - - 0.00000000000000000000000000000000000000000009747 165.0
BYD3_k127_4737700_21 peptidase M23 - - - 0.0000000000000000000000000000000000000002461 153.0
BYD3_k127_4737700_22 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000004326 154.0
BYD3_k127_4737700_23 NLP P60 protein - - - 0.0000000000000000000000000000000000000007819 156.0
BYD3_k127_4737700_24 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000000003692 150.0
BYD3_k127_4737700_25 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000003209 146.0
BYD3_k127_4737700_26 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.0000000000000000000000000000000002254 134.0
BYD3_k127_4737700_27 Transcriptional regulator - - - 0.0000000000000000000000000005549 115.0
BYD3_k127_4737700_28 TonB-dependent receptor - - - 0.00000000000000000000000004724 114.0
BYD3_k127_4737700_29 - - - - 0.00000000000000000000002582 105.0
BYD3_k127_4737700_3 Tetratricopeptide repeat protein - - - 4.262e-253 812.0
BYD3_k127_4737700_31 - - - - 0.000000000000002031 81.0
BYD3_k127_4737700_4 PFAM Aminotransferase class I and II K00639 - 2.3.1.29 1.307e-238 742.0
BYD3_k127_4737700_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 3.244e-229 715.0
BYD3_k127_4737700_6 Putative porin - - - 1.244e-210 674.0
BYD3_k127_4737700_7 fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 444.0
BYD3_k127_4737700_8 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 417.0
BYD3_k127_4737700_9 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 395.0
BYD3_k127_4769228_0 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 436.0
BYD3_k127_4769228_1 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000007354 180.0
BYD3_k127_4769228_2 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000001068 141.0
BYD3_k127_4769228_3 metallopeptidase activity - - - 0.000001559 53.0
BYD3_k127_4808827_0 regulator of cell autolysis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006105 252.0
BYD3_k127_4808827_1 regulator of cell autolysis - - - 0.00000000000000000000000000000000000000000000000000000000000000000001585 247.0
BYD3_k127_4808827_2 domain protein - - - 0.000000000000002431 76.0
BYD3_k127_4827092_0 Glycosyltransferase family 36 - - - 0.0 4563.0
BYD3_k127_4827092_1 FtsX-like permease family - - - 0.0 1115.0
BYD3_k127_4827092_2 TIGRFAM Acidobacterial duplicated orphan permease K02004 - - 0.0 1062.0
BYD3_k127_4827092_3 InterPro IPR003838 - - - 0.0 1052.0
BYD3_k127_4827092_4 MacB-like periplasmic core domain - - - 2.488e-308 963.0
BYD3_k127_4827092_5 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 2.583e-229 717.0
BYD3_k127_4827092_6 Histidine kinase - - - 1.42e-209 659.0
BYD3_k127_4827092_7 Efflux transporter, RND family, MFP subunit K02005 - - 3.965e-199 628.0
BYD3_k127_4827092_8 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 411.0
BYD3_k127_4827092_9 PRC-barrel domain - - - 0.000000000000000000000000000002275 129.0
BYD3_k127_4860250_0 metallophosphoesterase - - - 4.374e-257 814.0
BYD3_k127_4875278_0 Amino acid permease K03294 - - 1.377e-203 642.0
BYD3_k127_4875278_1 Pfam SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 492.0
BYD3_k127_4875278_10 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) - - - 0.0000000000000000000000000001415 119.0
BYD3_k127_4875278_2 Fe-S oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004931 456.0
BYD3_k127_4875278_3 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 406.0
BYD3_k127_4875278_4 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 317.0
BYD3_k127_4875278_5 PFAM LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 294.0
BYD3_k127_4875278_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001319 259.0
BYD3_k127_4875278_7 DinB family - - - 0.000000000000000000000000000000000000000000000142 173.0
BYD3_k127_4875278_8 PFAM LysE type translocator - - - 0.0000000000000000000000000000000000000000000009396 173.0
BYD3_k127_4875278_9 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000001906 164.0
BYD3_k127_4883030_0 PKD domain containing protein - - - 2.129e-269 854.0
BYD3_k127_4883030_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 3.247e-253 788.0
BYD3_k127_4883030_10 hydrolase of the alpha beta superfamily K07017 - - 0.000000003814 70.0
BYD3_k127_4883030_11 Putative esterase K07017 - - 0.00000393 60.0
BYD3_k127_4883030_2 PKD domain containing protein - - - 7.363e-249 795.0
BYD3_k127_4883030_3 Domain of unknown function (DUF4105) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009569 361.0
BYD3_k127_4883030_4 Ndr family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009201 293.0
BYD3_k127_4883030_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009774 284.0
BYD3_k127_4883030_6 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000005324 206.0
BYD3_k127_4883030_8 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000001337 189.0
BYD3_k127_4883030_9 KR domain - - - 0.000000000007652 66.0
BYD3_k127_4888760_0 Glyco_18 K01183 - 3.2.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 393.0
BYD3_k127_4888760_1 IMG reference gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 393.0
BYD3_k127_4888760_2 Integrase core domain K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 335.0
BYD3_k127_4888760_4 Domain of unknown function (DUF5009) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 329.0
BYD3_k127_4888760_5 transposase activity K07483,K07497 - - 0.00000000000000000000000000001021 122.0
BYD3_k127_4888760_6 Belongs to the peptidase S41A family K06399 - 3.4.21.116 0.0000000000000000000000002822 117.0
BYD3_k127_4888760_7 Domain of unknown function (DUF5009) - - - 0.0000000000000002456 79.0
BYD3_k127_4888760_8 Kelch repeat type 1 - - - 0.0000000441 66.0
BYD3_k127_4893114_0 PFAM Bacterial alpha-L-rhamnosidase K05989 - 3.2.1.40 0.0 1332.0
BYD3_k127_4893114_1 rhamnulose-1-phosphate aldolase alcohol dehydrogenase - - - 0.0 1203.0
BYD3_k127_4893114_2 Bacterial alpha-L-rhamnosidase C-terminal domain - - - 0.0 1053.0
BYD3_k127_4893114_3 L-rhamnose-proton symport protein (RhaT) K02856 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 588.0
BYD3_k127_4893114_4 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 474.0
BYD3_k127_4893114_5 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 448.0
BYD3_k127_4893114_6 PFAM Xylose - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003176 436.0
BYD3_k127_4893114_7 PFAM Mannose-6-phosphate isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000008048 231.0
BYD3_k127_4929256_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 3.606e-292 899.0
BYD3_k127_4929256_1 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009881 386.0
BYD3_k127_4929256_2 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005461 278.0
BYD3_k127_4929256_3 5'-nucleotidase K01081 - 3.1.3.5 0.000000000000000000000000000000000000000001556 165.0
BYD3_k127_4929256_4 GIY-YIG catalytic domain K07461 - - 0.00000000000002961 74.0
BYD3_k127_4929256_5 - - - - 0.0000001466 53.0
BYD3_k127_4929256_6 FAD-dependent dehydrogenase K07137 - - 0.000007146 49.0
BYD3_k127_4935371_0 chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 569.0
BYD3_k127_4935371_1 Chromate resistance exported protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 489.0
BYD3_k127_4935371_2 PA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 446.0
BYD3_k127_4935371_3 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244,K19743 - 1.4.1.1,1.5.1.1,4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 293.0
BYD3_k127_4935371_4 COG2755 Lysophospholipase L1 and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000001426 243.0
BYD3_k127_4935371_5 COG NOG27188 non supervised orthologous group - - - 0.0000000000000000000000000000002212 130.0
BYD3_k127_4935371_6 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000005064 111.0
BYD3_k127_4935371_7 Protein of unknown function (DUF2892) - - - 0.00000000007074 66.0
BYD3_k127_4935664_0 - - - - 0.0 1136.0
BYD3_k127_4935664_1 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.0 1017.0
BYD3_k127_4935664_10 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000588 302.0
BYD3_k127_4935664_11 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001104 251.0
BYD3_k127_4935664_12 Two component transcriptional regulator, LytTR family K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000005594 227.0
BYD3_k127_4935664_13 LysM domain - - - 0.00000000000000000000000000000000000000000000000000004303 196.0
BYD3_k127_4935664_14 Domain of Unknown Function (DUF326) - - - 0.00000000000000000000000000000000000000000000007343 171.0
BYD3_k127_4935664_15 Hep Hag repeat protein - - - 0.0000000000000000000000000000000000000000000007679 183.0
BYD3_k127_4935664_18 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000002451 99.0
BYD3_k127_4935664_2 Serine dehydratase K01752 - 4.3.1.17 6.272e-237 739.0
BYD3_k127_4935664_3 von Willebrand factor, type A - - - 5.011e-210 656.0
BYD3_k127_4935664_4 Zinc finger SWIM domain protein - - - 1.646e-205 646.0
BYD3_k127_4935664_5 PFAM ATPase associated with various cellular activities - - - 7.712e-204 637.0
BYD3_k127_4935664_6 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004029 544.0
BYD3_k127_4935664_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 504.0
BYD3_k127_4935664_8 GTP cyclohydrolase 1 K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009733 323.0
BYD3_k127_4935664_9 FAD-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 310.0
BYD3_k127_4943046_0 hemolysin activation secretion protein - - - 0.0 1262.0
BYD3_k127_4943046_1 Glycosyl hydrolase, family 20, catalytic domain - - - 5.47e-298 929.0
BYD3_k127_4943046_10 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 334.0
BYD3_k127_4943046_11 beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 314.0
BYD3_k127_4943046_12 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002016 273.0
BYD3_k127_4943046_13 PFAM Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000002194 260.0
BYD3_k127_4943046_14 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000006729 239.0
BYD3_k127_4943046_15 - - - - 0.000000000000000000000000000000000000000000000000000000001496 206.0
BYD3_k127_4943046_16 MazG nucleotide pyrophosphohydrolase domain - - - 0.0000000000000000000000000000000000000000000000000000009749 194.0
BYD3_k127_4943046_17 HD domain - - - 0.000000000000000000000000000000000000000000000000009174 186.0
BYD3_k127_4943046_18 abc-type fe3 -hydroxamate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000005115 151.0
BYD3_k127_4943046_19 Class I peptide chain release factor K15034 - - 0.000000000000000000000000000000000002006 143.0
BYD3_k127_4943046_2 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 4.727e-269 833.0
BYD3_k127_4943046_20 Protein conserved in bacteria - - - 0.0000000000000000000000000004696 117.0
BYD3_k127_4943046_21 - - - - 0.000000000000000000000000012 116.0
BYD3_k127_4943046_22 YceI-like domain - - - 0.00000000000000000000000001258 126.0
BYD3_k127_4943046_23 KTSC domain - - - 0.000000000000000003866 85.0
BYD3_k127_4943046_24 KTSC domain - - - 0.0000000000000001748 80.0
BYD3_k127_4943046_25 domain protein - - - 0.00000000000007552 85.0
BYD3_k127_4943046_3 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008133 543.0
BYD3_k127_4943046_4 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008596 483.0
BYD3_k127_4943046_5 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 446.0
BYD3_k127_4943046_6 Glyco_18 K01183 - 3.2.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 430.0
BYD3_k127_4943046_7 PFAM SPFH domain Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 399.0
BYD3_k127_4943046_8 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007777 390.0
BYD3_k127_4943046_9 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 376.0
BYD3_k127_4948872_0 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000153 312.0
BYD3_k127_4948872_1 YceI-like domain - - - 0.000000000000000000000003948 120.0
BYD3_k127_4948872_2 Hep Hag repeat protein - - - 0.00000000000000000000001602 115.0
BYD3_k127_4948872_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000008923 68.0
BYD3_k127_4965285_0 glutamine synthetase K01915 - 6.3.1.2 0.0 1242.0
BYD3_k127_4965285_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1216.0
BYD3_k127_4965285_10 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007383 367.0
BYD3_k127_4965285_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001319 287.0
BYD3_k127_4965285_12 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000001983 231.0
BYD3_k127_4965285_13 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000003636 230.0
BYD3_k127_4965285_14 metallophosphoesterase - - - 0.0000000000000000000000000000000000005769 141.0
BYD3_k127_4965285_15 Limonene-1,2-epoxide hydrolase catalytic domain K03088 - - 0.0000000000000000000345 94.0
BYD3_k127_4965285_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.048e-204 666.0
BYD3_k127_4965285_3 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 1.389e-198 621.0
BYD3_k127_4965285_4 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 561.0
BYD3_k127_4965285_5 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 484.0
BYD3_k127_4965285_6 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 453.0
BYD3_k127_4965285_7 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 434.0
BYD3_k127_4965285_8 Phosphate transport system permease protein K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 398.0
BYD3_k127_4965285_9 ATPase-coupled phosphate ion transmembrane transporter activity K02036 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0008144,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008389 374.0
BYD3_k127_4971559_0 Glucosamine-6-phosphate K02564 - 3.5.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009453 387.0
BYD3_k127_4971559_1 COGs COG3712 Fe2 -dicitrate sensor membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000327 238.0
BYD3_k127_4971559_2 RNA polymerase sigma factor - - - 0.0000000000000000000000000000000000000000000000000962 183.0
BYD3_k127_4971559_3 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000002464 136.0
BYD3_k127_4990589_0 Penicillin amidase - - - 0.0 1060.0
BYD3_k127_4990589_1 DNA helicase K03657 - 3.6.4.12 1.276e-201 633.0
BYD3_k127_4990589_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004625 421.0
BYD3_k127_4990589_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 348.0
BYD3_k127_4990589_4 Protein of unknown function (Porph_ging) - - - 0.00000000000000000000000000000000000000000000000000000000004916 214.0
BYD3_k127_4990589_5 hydrolase of the alpha beta-hydrolase fold - - - 0.00000000000000000000000000000000000000000000000315 184.0
BYD3_k127_4990589_6 - - - - 0.000000000000000000000000001504 119.0
BYD3_k127_499702_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 1.126e-246 766.0
BYD3_k127_499702_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 3.345e-202 645.0
BYD3_k127_499702_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 4.6e-198 626.0
BYD3_k127_499702_3 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 595.0
BYD3_k127_499702_4 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 471.0
BYD3_k127_499702_5 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000001354 261.0
BYD3_k127_499702_6 Cell division protein K03589 - - 0.000000000000000000000000000000000000000000000000000000000000000000004381 246.0
BYD3_k127_5003480_0 TonB dependent receptor - - - 1.526e-243 766.0
BYD3_k127_5003480_1 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 432.0
BYD3_k127_5003480_2 Methane oxygenase PmoA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 415.0
BYD3_k127_5003480_3 Gram-negative-bacterium-type cell outer membrane assembly K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 419.0
BYD3_k127_5003480_4 Two component transcriptional regulator, LytTR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004788 404.0
BYD3_k127_5003480_5 PFAM Signal transduction histidine kinase, internal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 355.0
BYD3_k127_5003480_6 Oxidoreductase domain protein - - - 0.000000000000000000000000000000000001216 138.0
BYD3_k127_5082442_0 TIGRFAM Acidobacterial duplicated orphan permease K02004 - - 0.0 1018.0
BYD3_k127_5082442_1 permease - - - 4.424e-273 862.0
BYD3_k127_5082442_2 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 585.0
BYD3_k127_5082442_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000123 120.0
BYD3_k127_5088310_0 COGs COG0058 Glucan phosphorylase K00688,K00691 - 2.4.1.1,2.4.1.8 3.09e-267 831.0
BYD3_k127_5088310_1 TIGRFAM Alcohol dehydrogenase, zinc-binding type 2 K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007707 513.0
BYD3_k127_5088310_2 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 GO:0003674,GO:0003824,GO:0004322,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016491,GO:0016722,GO:0016724,GO:0019725,GO:0030003,GO:0033212,GO:0033214,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0098771 1.16.3.1 0.000000000000000000000000000000000000000000000000000000004693 202.0
BYD3_k127_5088310_3 SPTR Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07005 - - 0.0000000000000000000000000000000000000000000004861 171.0
BYD3_k127_5088310_4 glyoxalase III activity K13653 - - 0.00000000000000000000000000000000000002048 146.0
BYD3_k127_5088310_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000004177 147.0
BYD3_k127_5088310_6 translation release factor activity - - - 0.0000000000000000000000000000006127 127.0
BYD3_k127_50889_0 Protein of unknown function (DUF1553) - - - 0.0 1081.0
BYD3_k127_50889_1 Y_Y_Y domain - - - 1.968e-312 987.0
BYD3_k127_50889_10 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 503.0
BYD3_k127_50889_11 Planctomycete cytochrome C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008234 469.0
BYD3_k127_50889_12 Pfam Xylose - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008423 461.0
BYD3_k127_50889_13 Y_Y_Y domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 490.0
BYD3_k127_50889_14 Aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009034 430.0
BYD3_k127_50889_15 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 391.0
BYD3_k127_50889_16 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 406.0
BYD3_k127_50889_17 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 361.0
BYD3_k127_50889_18 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 323.0
BYD3_k127_50889_19 TIGRFAM hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 310.0
BYD3_k127_50889_2 Glycosyl hydrolase family 65, N-terminal domain K15923 - 3.2.1.51 1.093e-299 935.0
BYD3_k127_50889_20 Enoyl-(Acyl carrier protein) reductase K00059,K18333 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 298.0
BYD3_k127_50889_21 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 297.0
BYD3_k127_50889_22 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007906 291.0
BYD3_k127_50889_23 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002668 280.0
BYD3_k127_50889_24 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004721 277.0
BYD3_k127_50889_25 Amidohydrolase K07046 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007734 250.0
BYD3_k127_50889_26 B12 binding domain K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000003771 241.0
BYD3_k127_50889_27 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000003971 242.0
BYD3_k127_50889_28 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000006264 233.0
BYD3_k127_50889_29 Nodulation protein S (NodS) - - - 0.00000000000000000000000000000000000000000000000000000000000000004263 233.0
BYD3_k127_50889_3 Protein of unknown function (DUF1501) - - - 1.469e-264 820.0
BYD3_k127_50889_30 Two component transcriptional regulator, LytTR family K02477 - - 0.00000000000000000000000000000000000000000000000000000000000001014 223.0
BYD3_k127_50889_31 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.00000000000000000000000000000000000000000000000000000000005411 223.0
BYD3_k127_50889_32 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.0000000000000000000000000000000000000000000000000003704 203.0
BYD3_k127_50889_33 Protein of unknown function (DUF983) - - - 0.0000000000000000000000000000000000000000000000004757 179.0
BYD3_k127_50889_34 - - - - 0.0000000000000000000000000000000000000000005445 168.0
BYD3_k127_50889_35 Globin - - - 0.000000000000000000000000000000000000000001726 160.0
BYD3_k127_50889_36 F plasmid transfer operon protein K03671 - - 0.00000000000000000000000000000000000005101 145.0
BYD3_k127_50889_37 Hep Hag repeat protein - - - 0.0000000000000000000000000001766 129.0
BYD3_k127_50889_38 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000001819 89.0
BYD3_k127_50889_39 Hep Hag repeat protein - - - 0.0000000000000001361 93.0
BYD3_k127_50889_4 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 6.022e-261 811.0
BYD3_k127_50889_40 Prokaryotic N-terminal methylation motif K02456,K02457,K02458,K02459,K02655,K10926 - - 0.000000000000001609 85.0
BYD3_k127_50889_41 Prokaryotic N-terminal methylation motif K02456,K02457,K02458,K02459,K02655,K10926 - - 0.0000000000007698 78.0
BYD3_k127_50889_42 - - - - 0.000000000003967 73.0
BYD3_k127_50889_43 C-terminal of Glycosyl hydrolases family 43 - - - 0.000000003066 66.0
BYD3_k127_50889_44 cellulase activity K01224 - 3.2.1.89 0.000000288 61.0
BYD3_k127_50889_45 LamG domain protein jellyroll fold domain protein - - - 0.00000227 58.0
BYD3_k127_50889_46 PFAM DsrE DsrF-like family K09004 - - 0.00003872 46.0
BYD3_k127_50889_5 Circularly permuted ATP-grasp type 2 - - - 2.463e-257 799.0
BYD3_k127_50889_6 Y_Y_Y domain - - - 1.005e-220 719.0
BYD3_k127_50889_7 PFAM coagulation factor 5 8 type K01206 - 3.2.1.51 3.001e-205 647.0
BYD3_k127_50889_8 Metalloenzyme superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 539.0
BYD3_k127_50889_9 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 527.0
BYD3_k127_5114607_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 3.155e-221 696.0
BYD3_k127_5114607_1 Catalyzes the hydrolysis of terminal beta-D-glucosyl residues K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003892 394.0
BYD3_k127_5197663_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 1.258e-214 676.0
BYD3_k127_5197663_1 SusD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 458.0
BYD3_k127_5197663_2 Domain of unknown function (DUF4369) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002763 284.0
BYD3_k127_5197663_3 serine-type endopeptidase activity K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000005379 200.0
BYD3_k127_5197663_4 acetyltransferase - - - 0.0000000000000000000000000000000000000008119 153.0
BYD3_k127_5197663_5 Peptidase, M28 - - - 0.000000000000000000000001654 106.0
BYD3_k127_5197663_6 Peptidase, M28 - - - 0.0000000000000000000002603 98.0
BYD3_k127_5205955_0 PFAM Major facilitator superfamily MFS-1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008869 553.0
BYD3_k127_5205955_1 Glycosyl Hydrolase Family 88 K18581 - 3.2.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009945 388.0
BYD3_k127_5205955_2 Protein of unknown function (DUF3500) - - - 0.0000000000000000000000000000000000000000004461 158.0
BYD3_k127_5205955_3 - - - - 0.000000000000000000000000000009436 128.0
BYD3_k127_5206681_0 homogentisate 12-dioxygenase K00451 - 1.13.11.5 3.228e-202 630.0
BYD3_k127_5206681_1 Phosphoesterase K07095 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001238 245.0
BYD3_k127_5206681_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000000000000000000000000000000000598 156.0
BYD3_k127_5206681_3 bleomycin resistance protein - - - 0.00000000000000000000000000000000000000007655 153.0
BYD3_k127_5206681_4 acetyltransferase - - - 0.0000000000000000000001248 97.0
BYD3_k127_5209546_0 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 364.0
BYD3_k127_5209546_1 Signal transduction histidine kinase, LytS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 385.0
BYD3_k127_5209546_2 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 335.0
BYD3_k127_5209546_3 PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 323.0
BYD3_k127_5209546_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000002056 201.0
BYD3_k127_5209546_5 metallopeptidase activity - - - 0.000000000000000000000000000000000000009579 165.0
BYD3_k127_5209546_6 Carboxypeptidase regulatory-like domain - - - 0.00000000000113 79.0
BYD3_k127_5209546_7 Galactose oxidase, central domain - - - 0.000000001236 71.0
BYD3_k127_5209546_8 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0005298 45.0
BYD3_k127_5225263_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1263.0
BYD3_k127_5225263_1 COGs COG3533 conserved K09955 - - 0.0 1016.0
BYD3_k127_5225263_10 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 433.0
BYD3_k127_5225263_11 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 421.0
BYD3_k127_5225263_12 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 433.0
BYD3_k127_5225263_13 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 407.0
BYD3_k127_5225263_14 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 396.0
BYD3_k127_5225263_15 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 363.0
BYD3_k127_5225263_16 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 356.0
BYD3_k127_5225263_17 spore germination - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 308.0
BYD3_k127_5225263_18 pfam nudix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002042 271.0
BYD3_k127_5225263_19 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002211 265.0
BYD3_k127_5225263_2 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 1.109e-211 662.0
BYD3_k127_5225263_20 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000004076 255.0
BYD3_k127_5225263_21 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000399 256.0
BYD3_k127_5225263_22 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001188 246.0
BYD3_k127_5225263_23 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000001116 207.0
BYD3_k127_5225263_24 - - - - 0.00000000000000000000000000000000000000000000000000000003508 203.0
BYD3_k127_5225263_25 - - - - 0.000000000000000000000000000000000000000002949 167.0
BYD3_k127_5225263_26 acetyltransferase - - - 0.00000000000000000000000000000000001564 141.0
BYD3_k127_5225263_27 Domain of unknown function (DUF5127) - - - 0.000000000000000000008741 91.0
BYD3_k127_5225263_28 - - - - 0.0000009381 53.0
BYD3_k127_5225263_29 TonB family domain protein - - - 0.00002971 55.0
BYD3_k127_5225263_3 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009224 598.0
BYD3_k127_5225263_4 Belongs to the BshC family K22136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 597.0
BYD3_k127_5225263_5 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 587.0
BYD3_k127_5225263_6 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 561.0
BYD3_k127_5225263_7 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 549.0
BYD3_k127_5225263_8 PFAM FAD dependent oxidoreductase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 472.0
BYD3_k127_5225263_9 Cellulase (glycosyl hydrolase family 5) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 439.0
BYD3_k127_5261_0 Peptidase family M1 domain K01256 - 3.4.11.2 9.094e-249 776.0
BYD3_k127_5261_1 Glucose Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 551.0
BYD3_k127_5261_10 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003226 286.0
BYD3_k127_5261_11 Protein of unknown function (DUF1415) K09941 - - 0.000000000000000000000000000000000000000000000000000000000000000000001762 239.0
BYD3_k127_5261_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002449 246.0
BYD3_k127_5261_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000012 228.0
BYD3_k127_5261_14 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000000000004327 218.0
BYD3_k127_5261_15 dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000001205 211.0
BYD3_k127_5261_16 general stress protein - - - 0.00000000000000000000000000000000000000000000000000000001266 203.0
BYD3_k127_5261_17 PFAM Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000000000000000001131 198.0
BYD3_k127_5261_18 - - - - 0.00000000000000000000000000000000000000000000000000006514 191.0
BYD3_k127_5261_19 - - - - 0.000000000000000000000000000000000000000000000001271 178.0
BYD3_k127_5261_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 480.0
BYD3_k127_5261_20 Putative lumazine-binding - - - 0.0000000000000000000000000000000000000000000003376 172.0
BYD3_k127_5261_21 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000601 172.0
BYD3_k127_5261_22 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000000000298 152.0
BYD3_k127_5261_23 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000003428 124.0
BYD3_k127_5261_24 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000000000000000000000000001822 119.0
BYD3_k127_5261_26 Domain of unknown function (DU1801) - - - 0.0000000000000000000000003901 107.0
BYD3_k127_5261_27 META domain - - - 0.0000000000000000000000007207 108.0
BYD3_k127_5261_28 Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000026 85.0
BYD3_k127_5261_29 - - - - 0.00000000000000002536 90.0
BYD3_k127_5261_3 Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 427.0
BYD3_k127_5261_30 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.000000000000002824 77.0
BYD3_k127_5261_31 - - - - 0.000000000000006999 78.0
BYD3_k127_5261_32 - - - - 0.0000000008232 61.0
BYD3_k127_5261_33 - - - - 0.0000005062 57.0
BYD3_k127_5261_4 Inosine-uridine preferring nucleoside hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 413.0
BYD3_k127_5261_5 PFAM amine oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005586 346.0
BYD3_k127_5261_6 protein with SCP PR1 domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 322.0
BYD3_k127_5261_7 EcsC protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 306.0
BYD3_k127_5261_8 PFAM metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 310.0
BYD3_k127_5261_9 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007789 293.0
BYD3_k127_5274366_0 SnoaL-like domain - - - 0.0 1169.0
BYD3_k127_5274366_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000001181 89.0
BYD3_k127_5283762_0 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 5.641e-240 748.0
BYD3_k127_5283762_1 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000000000000000000000002937 198.0
BYD3_k127_5283762_2 Domain of unknown function (DUF4136) - - - 0.0000000000000000000000000000000000000000000001061 174.0
BYD3_k127_5283762_3 Cytochrome c - - - 0.0000000000000002151 82.0
BYD3_k127_5290597_0 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003621 543.0
BYD3_k127_5290597_1 Histidine kinase K07636 - 2.7.13.3 0.0000000000000001028 79.0
BYD3_k127_5290597_2 TonB-dependent receptor - - - 0.000000005303 58.0
BYD3_k127_5296626_0 TonB-dependent Receptor Plug Domain K02014 - - 1.557e-298 930.0
BYD3_k127_5296626_1 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 583.0
BYD3_k127_5296626_10 Cupin domain - - - 0.0000000000000000000000000001717 118.0
BYD3_k127_5296626_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 465.0
BYD3_k127_5296626_3 acyl-CoA reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 462.0
BYD3_k127_5296626_4 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 414.0
BYD3_k127_5296626_5 PASTA domain containing protein K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000007919 259.0
BYD3_k127_5296626_6 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000001317 258.0
BYD3_k127_5296626_7 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000199 233.0
BYD3_k127_5296626_8 protein histidine kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000001152 213.0
BYD3_k127_5296626_9 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000008363 159.0
BYD3_k127_5373189_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.26e-224 701.0
BYD3_k127_5373189_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 494.0
BYD3_k127_5373189_2 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003077 309.0
BYD3_k127_5373189_3 PFAM Acetyltransferase (GNAT) family K03790 - 2.3.1.128 0.000000000000000000000000000000000000000000000007977 176.0
BYD3_k127_5381331_0 belongs to the imidazoleglycerol-phosphate dehydratase family K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007368 586.0
BYD3_k127_5381331_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 445.0
BYD3_k127_5381331_2 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 332.0
BYD3_k127_5381331_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007408 302.0
BYD3_k127_5381331_4 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000000000000007762 237.0
BYD3_k127_5395593_0 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00632 - 2.3.1.16 1.555e-218 683.0
BYD3_k127_5395593_1 Protein of unknown function (DUF1800) - - - 5.005e-211 670.0
BYD3_k127_540790_0 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000573 562.0
BYD3_k127_540790_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 516.0
BYD3_k127_540790_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009184 376.0
BYD3_k127_540790_3 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 333.0
BYD3_k127_540790_4 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002695 274.0
BYD3_k127_540790_5 deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001394 262.0
BYD3_k127_540790_6 Protein of unknown function (DUF2795) - - - 0.00000000000000000000000000000000000000006528 151.0
BYD3_k127_540790_7 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000001792 128.0
BYD3_k127_5425033_0 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 3.135e-216 678.0
BYD3_k127_5425033_1 PFAM Peptidase family M20 M25 M40 K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 551.0
BYD3_k127_5425033_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 403.0
BYD3_k127_5425033_3 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 385.0
BYD3_k127_5425033_4 - - - - 0.00000000000000000000000153 108.0
BYD3_k127_5448589_0 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 8.082e-251 782.0
BYD3_k127_5448589_1 Exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 518.0
BYD3_k127_5448589_2 domain, Protein K13735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 357.0
BYD3_k127_5448589_3 DEAD DEAH box helicase K03724 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 320.0
BYD3_k127_5448589_4 domain, Protein K13735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002616 287.0
BYD3_k127_5453546_0 Methyltransferase - - - 8.066e-215 680.0
BYD3_k127_5453546_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000043 410.0
BYD3_k127_5453546_2 Glyoxalase K04750 - - 0.000000000000000000000000000000000000000000000000000000000000001084 223.0
BYD3_k127_5453546_3 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.00000000000003256 73.0
BYD3_k127_5453546_4 - - - - 0.000000001992 66.0
BYD3_k127_5453546_5 Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.00004392 51.0
BYD3_k127_5460234_0 protein conserved in bacteria K09955 - - 0.0 1178.0
BYD3_k127_5460234_1 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.0 1128.0
BYD3_k127_5460234_10 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 316.0
BYD3_k127_5460234_11 InterPro IPR010287 - - - 0.000000000000000000000000000000000000000000000000000000000000005353 223.0
BYD3_k127_5460234_12 Beta-galactosidase - - - 0.0000000000000000009435 88.0
BYD3_k127_5460234_2 Belongs to the glycosyl hydrolase 43 family - - - 8.236e-223 697.0
BYD3_k127_5460234_3 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 606.0
BYD3_k127_5460234_4 Belongs to the glycosyl hydrolase 13 family K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 587.0
BYD3_k127_5460234_5 Putative esterase K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 569.0
BYD3_k127_5460234_6 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 472.0
BYD3_k127_5460234_7 Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 449.0
BYD3_k127_5460234_8 COGs COG0726 xylanase chitin deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 395.0
BYD3_k127_5460234_9 Phospholipase D. Active site motifs. K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 385.0
BYD3_k127_5534610_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008109 604.0
BYD3_k127_5534610_1 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 367.0
BYD3_k127_5534610_2 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000008671 158.0
BYD3_k127_5534610_3 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000005497 101.0
BYD3_k127_5556621_0 alpha-2-macroglobulin domain protein K06894 - - 0.0 2009.0
BYD3_k127_5556621_1 Penicillin-binding Protein K05367 - 2.4.1.129 9.618e-319 985.0
BYD3_k127_5556621_2 transglutaminase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001022 267.0
BYD3_k127_5556621_3 Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000000000000000001835 224.0
BYD3_k127_5556621_4 Penicillin-binding Protein K05367 - 2.4.1.129 0.0000000000000000000000000000000000000000003131 161.0
BYD3_k127_5556621_5 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000000000001263 119.0
BYD3_k127_5556621_6 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000002234 52.0
BYD3_k127_5595585_0 Domain of unknown function (DUF4976) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 506.0
BYD3_k127_5595585_1 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 472.0
BYD3_k127_5595585_2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007838 428.0
BYD3_k127_5595585_3 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 366.0
BYD3_k127_5595585_4 Asparaginase, N-terminal K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003411 272.0
BYD3_k127_5595585_5 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000001152 214.0
BYD3_k127_5595585_6 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000004409 211.0
BYD3_k127_5595585_7 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01921 - 6.3.2.4 0.0000000000000000000000000000001121 124.0
BYD3_k127_5595585_8 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.000000000000000004497 89.0
BYD3_k127_5608132_0 aconitate hydratase K01681 - 4.2.1.3 5.158e-319 982.0
BYD3_k127_5608132_1 Beta-eliminating lyase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 485.0
BYD3_k127_5608132_2 Dienelactone hydrolase family - - - 0.0000000000000000008266 88.0
BYD3_k127_5619968_0 ABC transporter - - - 3.127e-275 856.0
BYD3_k127_5619968_1 PFAM sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 518.0
BYD3_k127_5619968_10 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000000000000000000005504 188.0
BYD3_k127_5619968_11 exo-alpha-(2->6)-sialidase activity K01387 - 3.4.24.3 0.0000000000000000000000000000000000000000000000001656 205.0
BYD3_k127_5619968_12 - - - - 0.0000000000000000000000000000000000004834 142.0
BYD3_k127_5619968_13 Protein of unknown function (DUF3667) - - - 0.0000000000000000000000002675 115.0
BYD3_k127_5619968_14 MerR HTH family regulatory protein - - - 0.0000000000000000000000004086 107.0
BYD3_k127_5619968_15 LytTr DNA-binding domain - - - 0.000000000000000000000001326 103.0
BYD3_k127_5619968_16 - - - - 0.0000000000000000003768 97.0
BYD3_k127_5619968_17 Protein of unknown function (DUF1573) - - - 0.00000000000000003563 88.0
BYD3_k127_5619968_18 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) - - - 0.00000000000001498 77.0
BYD3_k127_5619968_2 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 499.0
BYD3_k127_5619968_3 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 466.0
BYD3_k127_5619968_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 437.0
BYD3_k127_5619968_5 chaperone DnaJ K03686,K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 411.0
BYD3_k127_5619968_6 S1 P1 nuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003617 364.0
BYD3_k127_5619968_7 ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000002809 248.0
BYD3_k127_5619968_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000004148 209.0
BYD3_k127_5619968_9 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000000000000000000000000000001788 189.0
BYD3_k127_5632217_0 DNA segregation ATPase FtsK SpoIIIE and related K03466 - - 1.549e-308 966.0
BYD3_k127_5632217_1 acyl-CoA dehydrogenase K00252 - 1.3.8.6 5.402e-235 729.0
BYD3_k127_5632217_10 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000001257 141.0
BYD3_k127_5632217_11 Protein of unknown function (DUF423) - - - 0.000000000000000000000000000006836 123.0
BYD3_k127_5632217_12 YCII-related domain - - - 0.000000000000000000000001541 108.0
BYD3_k127_5632217_2 Belongs to the aldehyde dehydrogenase family K10217 - 1.2.1.32,1.2.1.85 2.807e-216 680.0
BYD3_k127_5632217_3 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 573.0
BYD3_k127_5632217_4 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 542.0
BYD3_k127_5632217_5 Histidine kinase K07778 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008335 413.0
BYD3_k127_5632217_6 Orotidine 5''-phosphate decarboxylase K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 399.0
BYD3_k127_5632217_7 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000000000000000000000000000000000000000002081 204.0
BYD3_k127_5632217_8 Endoribonuclease L-PSP K15067 - 3.5.99.5 0.000000000000000000000000000000000000000000000000000000445 196.0
BYD3_k127_5632217_9 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000006318 192.0
BYD3_k127_5634583_0 Amidophosphoribosyltransferase K00764 - 2.4.2.14 5.909e-310 958.0
BYD3_k127_5634583_1 peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 482.0
BYD3_k127_5634583_2 SPTR Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 443.0
BYD3_k127_5634583_3 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 380.0
BYD3_k127_5634583_4 Glycosyl transferase family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 346.0
BYD3_k127_5634583_5 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004389 262.0
BYD3_k127_5634583_6 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000000000000000000000000000000000002609 203.0
BYD3_k127_5643428_0 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 436.0
BYD3_k127_5643428_1 Peptidyl-prolyl cis-trans isomerase K01802,K03774,K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000001374 232.0
BYD3_k127_5643428_2 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.00000000000000000000000000000000000000000000000000000000000001146 217.0
BYD3_k127_5643428_3 - - - - 0.0000000000000000000000000000000000000000000000005045 181.0
BYD3_k127_5649194_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 525.0
BYD3_k127_5649194_1 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 424.0
BYD3_k127_5649194_10 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004161 265.0
BYD3_k127_5649194_11 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000557 212.0
BYD3_k127_5649194_13 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000001951 140.0
BYD3_k127_5649194_14 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000001296 136.0
BYD3_k127_5649194_2 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 419.0
BYD3_k127_5649194_3 peptidase S1 and S6 chymotrypsin Hap - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 396.0
BYD3_k127_5649194_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 372.0
BYD3_k127_5649194_5 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 357.0
BYD3_k127_5649194_6 Prephenate dehydratase K04518 - 4.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 341.0
BYD3_k127_5649194_7 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 285.0
BYD3_k127_5649194_8 1-aminocyclopropane-1-carboxylate deaminase K01505 - 3.5.99.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001193 284.0
BYD3_k127_5649194_9 SpoU rRNA Methylase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005251 267.0
BYD3_k127_56580_0 elongation factor G domain IV K02355 - - 0.0 1013.0
BYD3_k127_56580_1 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000913 195.0
BYD3_k127_5688257_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 1.123e-264 822.0
BYD3_k127_5688257_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 6.119e-226 708.0
BYD3_k127_5688257_2 endonuclease exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 371.0
BYD3_k127_5688257_3 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 293.0
BYD3_k127_5688257_4 PFAM HhH-GPD superfamily base excision DNA repair protein K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007322 276.0
BYD3_k127_5688257_5 Rhomboid family K09650 - 3.4.21.105 0.000000000000000000000000000000000000000000000000000000000000000006127 232.0
BYD3_k127_5688257_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000004186 225.0
BYD3_k127_5688257_7 - - - - 0.0000000000000000000000000000000000000005508 156.0
BYD3_k127_5688257_9 mandelate racemase muconate lactonizing K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.000000004152 58.0
BYD3_k127_5751381_0 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000344 503.0
BYD3_k127_5751381_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008607 398.0
BYD3_k127_5751381_2 Transcriptional regulator, asnc family K03718 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001165 247.0
BYD3_k127_5751381_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001818 241.0
BYD3_k127_5751381_5 acyl-CoA dehydrogenase - - - 0.00000000000335 67.0
BYD3_k127_5807282_0 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000000000000000000000001118 235.0
BYD3_k127_5807282_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000001564 159.0
BYD3_k127_5896368_0 Domain of unknown function (DUF5118) - - - 1.269e-317 992.0
BYD3_k127_5896368_1 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 7.435e-278 867.0
BYD3_k127_5896368_10 ftsk spoiiie - - - 0.000000000000000000000000000000000000000000000000000000000000005658 248.0
BYD3_k127_5896368_11 PFAM Biopolymer transport protein ExbD TolR - - - 0.0000000000000000000000000000000000000000000000000000026 198.0
BYD3_k127_5896368_12 WD domain, G-beta repeat - - - 0.00000000000000000001759 98.0
BYD3_k127_5896368_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 4.302e-209 659.0
BYD3_k127_5896368_3 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 3.191e-194 617.0
BYD3_k127_5896368_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005814 591.0
BYD3_k127_5896368_5 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 486.0
BYD3_k127_5896368_6 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004986 403.0
BYD3_k127_5896368_7 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000937 286.0
BYD3_k127_5896368_8 PFAM Biopolymer transport protein ExbD TolR - - - 0.000000000000000000000000000000000000000000000000000000000000000004823 230.0
BYD3_k127_5896368_9 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000004428 241.0
BYD3_k127_5900372_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 542.0
BYD3_k127_5900372_1 Motility related/secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 381.0
BYD3_k127_5900372_2 PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000589 330.0
BYD3_k127_5900372_3 Response regulator of the LytR AlgR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 298.0
BYD3_k127_5900372_4 regulator of cell autolysis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006306 278.0
BYD3_k127_5900372_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000003059 252.0
BYD3_k127_5900372_6 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000005118 239.0
BYD3_k127_5900372_7 PFAM DsrE DsrF-like family K09004 - - 0.000000000000001517 79.0
BYD3_k127_5906770_0 Carboxypeptidase regulatory-like domain - - - 5.965e-258 832.0
BYD3_k127_5906770_1 Belongs to the ompA family - - - 8.416e-241 760.0
BYD3_k127_5906770_2 DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 409.0
BYD3_k127_5906770_3 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 379.0
BYD3_k127_5906770_4 Starch-binding associating with outer membrane - - - 0.0000000000000000000000000000000000000000000000008749 183.0
BYD3_k127_5906770_5 DNA protecting protein DprA K04096 - - 0.00000000000000000001582 93.0
BYD3_k127_5914689_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 511.0
BYD3_k127_5914689_1 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002726 264.0
BYD3_k127_5914689_2 PFAM coagulation factor 5 8 type - - - 0.000000000000000000000000000000000000005249 146.0
BYD3_k127_5938397_0 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 307.0
BYD3_k127_5938397_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03543 - - 0.000000000000000000000000000000000000000000000000000000000006881 219.0
BYD3_k127_5938397_2 Surface antigen - - - 0.0000000000000000000000000000000000000000000008676 167.0
BYD3_k127_5938397_3 Ion transport 2 domain protein - - - 0.0000000000000000000000000000000006399 139.0
BYD3_k127_5938397_4 drug resistance transporter, EmrB QacA subfamily K03446 - - 0.000000000001907 79.0
BYD3_k127_5938697_0 MacB-like periplasmic core domain - - - 1.775e-208 675.0
BYD3_k127_5938697_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 556.0
BYD3_k127_5938697_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000622 198.0
BYD3_k127_5953002_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 567.0
BYD3_k127_5953002_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 529.0
BYD3_k127_5953002_10 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 315.0
BYD3_k127_5953002_11 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 306.0
BYD3_k127_5953002_12 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002148 278.0
BYD3_k127_5953002_13 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000000004262 188.0
BYD3_k127_5953002_14 GldH lipoprotein - GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000004323 162.0
BYD3_k127_5953002_15 - - - - 0.00001206 47.0
BYD3_k127_5953002_16 - - - - 0.0004594 51.0
BYD3_k127_5953002_2 glucosamine N-acyltransferase K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 455.0
BYD3_k127_5953002_3 NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 439.0
BYD3_k127_5953002_4 PFAM YicC-like family, N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 430.0
BYD3_k127_5953002_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005195 383.0
BYD3_k127_5953002_6 Dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007773 374.0
BYD3_k127_5953002_7 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000074 358.0
BYD3_k127_5953002_8 HAD-hyrolase-like K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 330.0
BYD3_k127_5953002_9 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 325.0
BYD3_k127_5978276_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 6.67e-201 633.0
BYD3_k127_5978276_1 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008233 400.0
BYD3_k127_5978276_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008203 351.0
BYD3_k127_5983513_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0 1248.0
BYD3_k127_5983513_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 2.5e-323 997.0
BYD3_k127_5983513_10 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 466.0
BYD3_k127_5983513_11 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009676 388.0
BYD3_k127_5983513_12 Methylase involved in ubiquinone menaquinone biosynthesis K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005351 379.0
BYD3_k127_5983513_13 Peptidase family S51 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003821 364.0
BYD3_k127_5983513_14 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006299 372.0
BYD3_k127_5983513_15 ankyrin repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 353.0
BYD3_k127_5983513_16 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004315 342.0
BYD3_k127_5983513_17 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000000008713 249.0
BYD3_k127_5983513_18 Acid phosphatase K09474 - 3.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000006345 251.0
BYD3_k127_5983513_19 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104,K03325,K03741,K03892,K18701 - 1.20.4.1,2.8.4.2,3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000000004464 229.0
BYD3_k127_5983513_2 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 7.614e-291 909.0
BYD3_k127_5983513_20 PFAM EamA-like transporter family K15270 - - 0.00000000000000000000000000000000000000000000000000000000000002128 225.0
BYD3_k127_5983513_21 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000007566 186.0
BYD3_k127_5983513_22 N-acetylglucosaminylinositol deacetylase activity - - - 0.000000000000000000000000000000000000000000000000001111 194.0
BYD3_k127_5983513_23 - - - - 0.000000000000000000000000000000000000000000000000009938 185.0
BYD3_k127_5983513_24 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000002442 180.0
BYD3_k127_5983513_25 Peptidase, M28 - - - 0.000000000000000000000000000000000000000000000002516 177.0
BYD3_k127_5983513_26 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.000000000000000000000000000000000003586 145.0
BYD3_k127_5983513_27 - - - - 0.00000000000000000000000000000000003865 138.0
BYD3_k127_5983513_28 FeoA K04758 - - 0.000000000000000000000001907 104.0
BYD3_k127_5983513_29 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000002221 94.0
BYD3_k127_5983513_3 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - 1.077e-234 752.0
BYD3_k127_5983513_4 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 1.475e-204 652.0
BYD3_k127_5983513_5 PFAM Aminotransferase class I and II K14287 - 2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005779 595.0
BYD3_k127_5983513_6 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412 592.0
BYD3_k127_5983513_7 mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 566.0
BYD3_k127_5983513_8 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 558.0
BYD3_k127_5983513_9 PFAM Peptidase family M20 M25 M40 K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 547.0
BYD3_k127_5993143_0 Raf kinase inhibitor-like protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000000008048 231.0
BYD3_k127_5993143_1 translation release factor activity - - - 0.00000000000000000000000000000000000000000000000002185 188.0
BYD3_k127_5997662_0 Pfam Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 543.0
BYD3_k127_5997662_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006692 386.0
BYD3_k127_5997662_2 Cytochrome c, class I K08738,K09992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003217 277.0
BYD3_k127_6027642_0 TonB dependent receptor - - - 0.0 1691.0
BYD3_k127_6027642_1 TonB-linked outer membrane protein, SusC RagA family - - - 0.0 1648.0
BYD3_k127_6027642_10 membrane protein required for spore maturation in B.subtilis K06373 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 594.0
BYD3_k127_6027642_11 Succinate dehydrogenase fumarate reductase Fe-S protein subunit K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 449.0
BYD3_k127_6027642_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 323.0
BYD3_k127_6027642_13 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004908 323.0
BYD3_k127_6027642_14 succinate dehydrogenase K00241 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 302.0
BYD3_k127_6027642_15 OstA-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001723 275.0
BYD3_k127_6027642_17 Protein of unknown function (DUF559) - - - 0.0000000000000000000000000000004215 126.0
BYD3_k127_6027642_2 Protein conserved in bacteria - - - 0.0 1332.0
BYD3_k127_6027642_3 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1185.0
BYD3_k127_6027642_4 Starch-binding associating with outer membrane - - - 0.0 1080.0
BYD3_k127_6027642_5 Pfam:SusD K21572 - - 2.888e-299 928.0
BYD3_k127_6027642_6 Peptidase S9, prolyl oligopeptidase, catalytic domain K01354 - 3.4.21.83 2.307e-271 854.0
BYD3_k127_6027642_7 PQQ enzyme repeat - - - 4.278e-252 791.0
BYD3_k127_6027642_8 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 1.593e-197 619.0
BYD3_k127_6027642_9 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 593.0
BYD3_k127_6027831_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1131.0
BYD3_k127_6027831_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 520.0
BYD3_k127_6027831_10 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002349 261.0
BYD3_k127_6027831_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001808 252.0
BYD3_k127_6027831_12 fatty acid desaturase K00508 - 1.14.19.3 0.000000000000000000000000000000000000000000000000000000000000000000008524 247.0
BYD3_k127_6027831_13 - - - - 0.00000000000000000000000000000000000000000000000000001428 191.0
BYD3_k127_6027831_14 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000002832 136.0
BYD3_k127_6027831_15 - - - - 0.00000000945 62.0
BYD3_k127_6027831_2 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P) K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 490.0
BYD3_k127_6027831_3 GSCFA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 473.0
BYD3_k127_6027831_4 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006763 400.0
BYD3_k127_6027831_5 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009901 368.0
BYD3_k127_6027831_6 PFAM Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 365.0
BYD3_k127_6027831_7 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 356.0
BYD3_k127_6027831_8 COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 329.0
BYD3_k127_6027831_9 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 328.0
BYD3_k127_6037512_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 2.511e-240 749.0
BYD3_k127_6037512_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 1.289e-217 682.0
BYD3_k127_6037512_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 2.033e-213 670.0
BYD3_k127_6047_0 TonB dependent receptor - - - 0.0 1145.0
BYD3_k127_6047_1 ABC transporter K06158 - - 6.589e-303 940.0
BYD3_k127_6047_2 Alanine dehydrogenase/PNT, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008545 400.0
BYD3_k127_6047_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000009596 243.0
BYD3_k127_6047_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000006592 147.0
BYD3_k127_6047_5 protein histidine kinase activity K05962 - 2.7.13.1 0.00000000000000000000000000000000106 138.0
BYD3_k127_6047_6 - - - - 0.000001283 53.0
BYD3_k127_6047_7 - - - - 0.0009869 44.0
BYD3_k127_6091867_0 TonB-dependent Receptor Plug Domain - - - 0.0 1028.0
BYD3_k127_6091867_1 mechanosensitive ion channel K05802 - - 1.829e-196 640.0
BYD3_k127_6091867_10 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000001503 195.0
BYD3_k127_6091867_11 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000006534 167.0
BYD3_k127_6091867_13 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000156 143.0
BYD3_k127_6091867_15 - - - - 0.000000000000000000000003199 109.0
BYD3_k127_6091867_16 Dodecin K09165 - - 0.000000000000000000000008458 104.0
BYD3_k127_6091867_18 Protein of unknown function (DUF3667) K01091 - 3.1.3.18 0.00000000000000000002651 100.0
BYD3_k127_6091867_19 Belongs to the UPF0312 family - - - 0.00000000000003162 83.0
BYD3_k127_6091867_2 Belongs to the glycosyl hydrolase 43 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 560.0
BYD3_k127_6091867_20 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000004148 62.0
BYD3_k127_6091867_21 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.000000713 53.0
BYD3_k127_6091867_3 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008375 442.0
BYD3_k127_6091867_4 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 432.0
BYD3_k127_6091867_5 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00042 - 1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 296.0
BYD3_k127_6091867_6 Protein of unknown function (DUF664) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004599 275.0
BYD3_k127_6091867_7 Belongs to the peptidase M48B family - - - 0.0000000000000000000000000000000000000000000000000000000001091 215.0
BYD3_k127_6091867_8 - - - - 0.0000000000000000000000000000000000000000000000000000000002463 209.0
BYD3_k127_6091867_9 Fibronectin type III domain protein - - - 0.0000000000000000000000000000000000000000000000000000009906 201.0
BYD3_k127_6152212_0 TIGRFAM TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region K21573 - - 0.0 1037.0
BYD3_k127_6152212_1 RagB SusD domain protein K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003376 441.0
BYD3_k127_6156913_0 PFAM GumN - - - 0.0 1057.0
BYD3_k127_6156913_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 4.862e-253 786.0
BYD3_k127_6156913_10 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 464.0
BYD3_k127_6156913_11 thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 316.0
BYD3_k127_6156913_12 PFAM Cytochrome c-type biogenesis protein CcmB K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 305.0
BYD3_k127_6156913_13 NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 299.0
BYD3_k127_6156913_14 PFAM Cytochrome c assembly protein K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 302.0
BYD3_k127_6156913_15 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.000000000000000000000000000000000000000000000000000000636 195.0
BYD3_k127_6156913_17 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000008015 106.0
BYD3_k127_6156913_18 - - - - 0.00000000009022 66.0
BYD3_k127_6156913_19 Domain of unknown function (DUF1768) - - - 0.00001274 51.0
BYD3_k127_6156913_2 Belongs to the ABC transporter superfamily K02031,K02032 - - 3.126e-242 760.0
BYD3_k127_6156913_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 5.652e-231 720.0
BYD3_k127_6156913_4 Belongs to the aspartokinase family K00928 - 2.7.2.4 1.659e-211 664.0
BYD3_k127_6156913_5 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 1.053e-210 656.0
BYD3_k127_6156913_6 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 601.0
BYD3_k127_6156913_7 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009733 574.0
BYD3_k127_6156913_8 Belongs to the glycosyl hydrolase 32 family K03332 - 3.2.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 512.0
BYD3_k127_6156913_9 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile K01241 - 3.2.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 459.0
BYD3_k127_6180299_0 COG1233 Phytoene dehydrogenase and related K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 5.062e-218 686.0
BYD3_k127_6180299_1 Belongs to the xylose isomerase family K01805 - 5.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 599.0
BYD3_k127_6180299_10 Formyl transferase - - - 0.0000000000000000000000000000000000000000000000000000003386 203.0
BYD3_k127_6180299_2 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 452.0
BYD3_k127_6180299_3 Squalene phytoene synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 389.0
BYD3_k127_6180299_4 MerR family K22491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 374.0
BYD3_k127_6180299_5 Lycopene cyclase protein K06443 - 5.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 345.0
BYD3_k127_6180299_6 TIGRFAM isopentenyl-diphosphate delta-isomerase, type 1 K01823 - 5.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000004094 256.0
BYD3_k127_6180299_7 Fatty acid hydroxylase K15746 - 1.14.15.24 0.0000000000000000000000000000000000000000000000000000000000000000000003986 241.0
BYD3_k127_6180299_8 COG4464 Capsular polysaccharide biosynthesis protein K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000000001345 237.0
BYD3_k127_6180299_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000001657 230.0
BYD3_k127_6181266_0 CarboxypepD_reg-like domain - - - 0.0 1268.0
BYD3_k127_6181266_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 4.579e-242 753.0
BYD3_k127_6181266_10 - - - - 0.000005367 48.0
BYD3_k127_6181266_2 ribonuclease, Rne Rng family K08301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 610.0
BYD3_k127_6181266_3 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 577.0
BYD3_k127_6181266_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 558.0
BYD3_k127_6181266_5 PFAM Peptidase, membrane zinc metallopeptidase K06973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 317.0
BYD3_k127_6181266_6 PFAM Phosphoribosyl transferase domain K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 292.0
BYD3_k127_6181266_7 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007817 274.0
BYD3_k127_6181266_8 Belongs to the bacterial histone-like protein family K03530 - - 0.000000000000000000000000000000000000000000000000000000004282 199.0
BYD3_k127_6181266_9 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000001758 187.0
BYD3_k127_6196672_0 SusD family K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000003447 235.0
BYD3_k127_6196672_1 SusE outer membrane protein K21571 - - 0.00000000000000000000000000000000000000000000000000000000002645 219.0
BYD3_k127_6196672_2 - - - - 0.000000000000000000000000000000000000000003515 166.0
BYD3_k127_6196672_3 Pkd domain containing protein - - - 0.00000000000005899 82.0
BYD3_k127_6199069_0 Legume lectin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 389.0
BYD3_k127_6199069_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000008958 224.0
BYD3_k127_6199069_2 Belongs to the dihydrofolate reductase family - - - 0.0000000000000000000000000000000000000000000000005958 181.0
BYD3_k127_6199069_3 regulatory protein, arsR - - - 0.0000000000000000000000000000000000000000000003581 171.0
BYD3_k127_6199069_4 methyltransferase - - - 0.000000000118 62.0
BYD3_k127_6225297_0 Neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 359.0
BYD3_k127_6225297_1 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 344.0
BYD3_k127_6225297_2 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006162 337.0
BYD3_k127_6225297_3 Lanthionine synthetase C-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003623 276.0
BYD3_k127_6225297_4 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004683 269.0
BYD3_k127_6225297_5 Prenyltransferase and squalene oxidase repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000002729 237.0
BYD3_k127_6225297_6 Lanthionine synthetase C family protein - - - 0.00000000000000000000000000000000000000000000000001002 193.0
BYD3_k127_6225297_7 - - - - 0.00000000000000000007335 93.0
BYD3_k127_6233147_0 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 465.0
BYD3_k127_6233147_1 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 424.0
BYD3_k127_6233147_10 - - - - 0.0007833 48.0
BYD3_k127_6233147_2 COGs COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005799 330.0
BYD3_k127_6233147_3 PFAM fructosamine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002811 299.0
BYD3_k127_6233147_4 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000002313 160.0
BYD3_k127_6233147_5 SWI complex, BAF60b domains - - - 0.0000000000000000000000000000000000000002719 153.0
BYD3_k127_6233147_6 YjbR - - - 0.00000000000000000000000003239 111.0
BYD3_k127_6233147_7 - - - - 0.0000000000000003607 85.0
BYD3_k127_6233147_8 YtxH-like protein - - - 0.000000003503 60.0
BYD3_k127_6233147_9 Dioxygenase - - - 0.00005568 52.0
BYD3_k127_6289558_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 2.286e-268 833.0
BYD3_k127_6289558_1 amino acid activation for nonribosomal peptide biosynthetic process - - - 2.512e-202 687.0
BYD3_k127_6289558_10 - - - - 0.000000000000005016 87.0
BYD3_k127_6289558_11 Putative metal-binding motif - - - 0.00000000000005731 87.0
BYD3_k127_6289558_12 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.000000000001178 83.0
BYD3_k127_6289558_13 - - - - 0.0000000003601 67.0
BYD3_k127_6289558_14 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00004552 50.0
BYD3_k127_6289558_2 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007027 487.0
BYD3_k127_6289558_3 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005212 367.0
BYD3_k127_6289558_4 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008162 382.0
BYD3_k127_6289558_5 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 287.0
BYD3_k127_6289558_6 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000002625 229.0
BYD3_k127_6289558_7 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000003503 147.0
BYD3_k127_6289558_8 - - - - 0.000000000000000000000001056 106.0
BYD3_k127_6289558_9 - - - - 0.0000000000000005359 94.0
BYD3_k127_63086_0 Amidohydrolase family - - - 5.965e-222 694.0
BYD3_k127_63086_1 TPR repeat - - - 0.000000000000000000000000000000000000000000000002769 199.0
BYD3_k127_6329316_0 Belongs to the UbiD family K03182 - 4.1.1.98 0.0 1075.0
BYD3_k127_6329316_1 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 8.254e-253 784.0
BYD3_k127_6329316_10 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 466.0
BYD3_k127_6329316_11 Fe-S oxidoreductase K18928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006562 403.0
BYD3_k127_6329316_12 DoxX family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 395.0
BYD3_k127_6329316_13 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006314 376.0
BYD3_k127_6329316_14 Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001693 297.0
BYD3_k127_6329316_15 Domain of Unknown Function (DUF1599) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002416 257.0
BYD3_k127_6329316_16 TraB family K09973 - - 0.000000000000000000000000000000000000000000000000000000000000000000000378 248.0
BYD3_k127_6329316_17 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000021 238.0
BYD3_k127_6329316_18 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001785 234.0
BYD3_k127_6329316_19 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000001425 226.0
BYD3_k127_6329316_2 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 2.687e-238 755.0
BYD3_k127_6329316_20 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000005113 226.0
BYD3_k127_6329316_21 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000001049 209.0
BYD3_k127_6329316_22 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000001218 205.0
BYD3_k127_6329316_23 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03767 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000001022 204.0
BYD3_k127_6329316_24 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.000000000000000000000000000000009744 128.0
BYD3_k127_6329316_25 IMP dehydrogenase activity - - - 0.0000000000000000000000268 105.0
BYD3_k127_6329316_3 von Willebrand factor, type A K07114 - - 1.131e-235 738.0
BYD3_k127_6329316_4 Amino acid permease K16238 - - 6.343e-219 685.0
BYD3_k127_6329316_5 Iron-containing alcohol dehydrogenase K00048 - 1.1.1.77 1.905e-212 663.0
BYD3_k127_6329316_6 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 565.0
BYD3_k127_6329316_7 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 544.0
BYD3_k127_6329316_8 SPTR Transglutaminase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003524 520.0
BYD3_k127_6329316_9 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008556 478.0
BYD3_k127_6351640_0 TonB-linked outer membrane protein, SusC RagA family - - - 4.892e-299 950.0
BYD3_k127_6351640_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 1.941e-249 781.0
BYD3_k127_6351640_10 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 348.0
BYD3_k127_6351640_11 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 288.0
BYD3_k127_6351640_12 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000001631 249.0
BYD3_k127_6351640_13 Galactose-1-phosphate uridyl transferase, C-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000001384 225.0
BYD3_k127_6351640_16 Bacterial regulatory proteins, deoR family - - - 0.000005206 49.0
BYD3_k127_6351640_2 PFAM FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 5.222e-197 625.0
BYD3_k127_6351640_3 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 618.0
BYD3_k127_6351640_4 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004001 563.0
BYD3_k127_6351640_5 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 516.0
BYD3_k127_6351640_6 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 483.0
BYD3_k127_6351640_7 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 422.0
BYD3_k127_6351640_8 galactokinase activity K00849 - 2.7.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007958 399.0
BYD3_k127_6351640_9 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 365.0
BYD3_k127_6390980_0 Belongs to the arginase family K01479 - 3.5.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006086 555.0
BYD3_k127_6390980_1 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005542 318.0
BYD3_k127_6499940_0 Acetyl xylan esterase - - - 9.542e-202 642.0
BYD3_k127_6499940_1 major facilitator superfamily K08191 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 595.0
BYD3_k127_6499940_2 Oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000172 277.0
BYD3_k127_6499940_3 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002674 273.0
BYD3_k127_6499940_5 Carbohydrate esterase, sialic acid-specific acetylesterase K05970 - 3.1.1.53 0.0000002406 59.0
BYD3_k127_6505579_0 Caenorhabditis protein of unknown function, DUF268 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005567 305.0
BYD3_k127_6505579_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001078 229.0
BYD3_k127_6505579_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins - - - 0.000000000000000000000000000000000000000000000000000000000007524 213.0
BYD3_k127_6505579_3 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000006686 133.0
BYD3_k127_6505579_4 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000002056 132.0
BYD3_k127_650724_0 PFAM sulfatase K01130 - 3.1.6.1 1.8e-311 957.0
BYD3_k127_650724_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 568.0
BYD3_k127_650724_2 Protein of unknown function (DUF1254) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 474.0
BYD3_k127_650724_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 324.0
BYD3_k127_6508262_0 FtsX-like permease family K02004 - - 1.565e-255 811.0
BYD3_k127_6508262_1 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 584.0
BYD3_k127_6508262_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008877 489.0
BYD3_k127_6508262_3 outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 454.0
BYD3_k127_6508262_4 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 377.0
BYD3_k127_654508_0 Zinc carboxypeptidase - - - 3.221e-300 933.0
BYD3_k127_654508_1 Belongs to the glycosyl hydrolase 32 family K03332 - 3.2.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006797 553.0
BYD3_k127_654508_2 single-stranded DNA-binding protein K03111 - - 0.00000000000000000000000000000000000000000000000000000001811 200.0
BYD3_k127_654508_3 COG1621 Beta-fructosidases (levanase invertase) K03332 GO:0003674,GO:0003824,GO:0004553,GO:0004564,GO:0005975,GO:0005984,GO:0005985,GO:0005987,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0016052,GO:0016787,GO:0016798,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0046352,GO:0071704,GO:1901575 3.2.1.80 0.000000001184 66.0
BYD3_k127_657526_0 Oxidoreductase NAD-binding domain protein K02030,K03810 - - 0.0 1079.0
BYD3_k127_657526_1 PFAM lipopolysaccharide biosynthesis - - - 2.38e-208 672.0
BYD3_k127_657526_10 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000554 251.0
BYD3_k127_657526_11 Glycosyltransferase, group 2 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001413 237.0
BYD3_k127_657526_12 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000007056 198.0
BYD3_k127_657526_13 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000002805 178.0
BYD3_k127_657526_14 DNA-dependent DNA replication K02315 - - 0.00000000000000000000000000000000000000003542 154.0
BYD3_k127_657526_15 O-methyltransferase activity K00797 - 2.5.1.16 0.000000000000000000000000000000001974 139.0
BYD3_k127_657526_16 Integrase core domain - - - 0.00000000000000000000000000000003097 130.0
BYD3_k127_657526_17 PFAM integrase - - - 0.0000000000000000000000002566 109.0
BYD3_k127_657526_18 Glycosyl transferases group 1 - - - 0.00000000000000000005642 102.0
BYD3_k127_657526_19 PFAM transposase IS116 IS110 IS902 family - - - 0.000000000000000002002 89.0
BYD3_k127_657526_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007155 482.0
BYD3_k127_657526_20 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000002943 92.0
BYD3_k127_657526_21 Belongs to the glycosyl hydrolase 13 family K01176 - 3.2.1.1 0.00000000000002518 75.0
BYD3_k127_657526_22 IstB-like ATP binding protein - - - 0.00000000000003459 74.0
BYD3_k127_657526_23 Alpha amylase, catalytic domain K01176 - 3.2.1.1 0.0000000000004866 72.0
BYD3_k127_657526_24 asparagine K01953 - 6.3.5.4 0.000000000003088 69.0
BYD3_k127_657526_25 asparagine synthase K01953 - 6.3.5.4 0.00000000001318 67.0
BYD3_k127_657526_26 Methyltransferase type 11 - - - 0.00000000006168 72.0
BYD3_k127_657526_27 alpha/beta hydrolase fold - - - 0.0000003193 53.0
BYD3_k127_657526_28 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.000001625 53.0
BYD3_k127_657526_29 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter - - - 0.00001502 48.0
BYD3_k127_657526_3 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 477.0
BYD3_k127_657526_30 Belongs to the 'phage' integrase family - - - 0.00001745 50.0
BYD3_k127_657526_31 Belongs to the UPF0758 family K03630 - - 0.00001929 46.0
BYD3_k127_657526_32 Alpha amylase, catalytic domain K01176 - 3.2.1.1 0.0001959 44.0
BYD3_k127_657526_4 Highly conserved protein containing a thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 474.0
BYD3_k127_657526_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 442.0
BYD3_k127_657526_6 Protein of unknown function (DUF354) K09726 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007943 379.0
BYD3_k127_657526_7 Right handed beta helix region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000047 388.0
BYD3_k127_657526_8 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 316.0
BYD3_k127_657526_9 COG1596 Periplasmic protein involved in polysaccharide export K01991 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 291.0
BYD3_k127_6599118_0 Ankyrin repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003035 269.0
BYD3_k127_6599118_1 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000531 250.0
BYD3_k127_6599118_2 Thioesterase superfamily - - - 0.0000000000000000000000000000000001959 136.0
BYD3_k127_6599118_3 Domain of unknown function (DUF1330) - - - 0.00000003801 58.0
BYD3_k127_6620263_0 Oxidoreductase - - - 3.515e-247 769.0
BYD3_k127_6620263_1 Glycosyl hydrolase family 53 K01224 - 3.2.1.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 323.0
BYD3_k127_6620263_2 Protocatechuate 3,4-dioxygenase beta subunit N terminal K00449 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000000000005877 244.0
BYD3_k127_6620263_3 methyltransferase - - - 0.0000000000000000000000000000000000000006041 157.0
BYD3_k127_6620263_4 Leucine-rich repeat (LRR) protein - - - 0.000000000000000000000000003383 130.0
BYD3_k127_6620822_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 9.683e-273 846.0
BYD3_k127_6620822_1 LamB porin K02024 - - 1.535e-197 625.0
BYD3_k127_6620822_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 586.0
BYD3_k127_6620822_3 Anaerobic c4-dicarboxylate membrane transporter K07791,K07792 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 285.0
BYD3_k127_6620822_4 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001518 258.0
BYD3_k127_662753_0 COG2885 Outer membrane protein and related peptidoglycan-associated - - - 3.857e-248 777.0
BYD3_k127_662753_1 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000726 437.0
BYD3_k127_662753_3 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000007922 249.0
BYD3_k127_662753_4 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000001879 201.0
BYD3_k127_662753_5 Outer membrane protein beta-barrel domain - - - 0.0000000004729 72.0
BYD3_k127_663117_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1594.0
BYD3_k127_663117_1 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005808 521.0
BYD3_k127_663117_10 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000000000004113 219.0
BYD3_k127_663117_11 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000000000002563 185.0
BYD3_k127_663117_12 Putative member of DMT superfamily (DUF486) K09922 - - 0.0000000000000000000000000000000000000000000000172 172.0
BYD3_k127_663117_13 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000008057 147.0
BYD3_k127_663117_14 Methyltransferase FkbM domain - - - 0.0000000000000000001167 98.0
BYD3_k127_663117_15 YceI-like domain - - - 0.00000000000000007879 94.0
BYD3_k127_663117_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 408.0
BYD3_k127_663117_3 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007002 361.0
BYD3_k127_663117_4 dTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 350.0
BYD3_k127_663117_5 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005477 335.0
BYD3_k127_663117_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007807 304.0
BYD3_k127_663117_7 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000535 273.0
BYD3_k127_663117_8 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000007861 233.0
BYD3_k127_663117_9 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000004386 235.0
BYD3_k127_6704680_0 Electron transfer flavoprotein K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000626 500.0
BYD3_k127_6704680_1 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 410.0
BYD3_k127_6704680_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 368.0
BYD3_k127_6704680_3 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 314.0
BYD3_k127_6704680_4 PFAM Glyoxalase Bleomycin resistance protein Dioxygenase superfamily K07104 - 1.13.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000004889 260.0
BYD3_k127_6704680_5 Type IV pilus biogenesis stability protein PilW - - - 0.0000000000000000000000000000000000000265 145.0
BYD3_k127_6704680_6 - - - - 0.0000000003885 65.0
BYD3_k127_67566_0 receptor - - - 1.561e-232 750.0
BYD3_k127_67566_1 Belongs to the PdxA family K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 535.0
BYD3_k127_67566_10 NHL repeat containing protein - - - 0.000005221 56.0
BYD3_k127_67566_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 350.0
BYD3_k127_67566_3 Quinoprotein glucose dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 333.0
BYD3_k127_67566_4 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008936 293.0
BYD3_k127_67566_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000633 249.0
BYD3_k127_67566_6 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.00000000000000000000000000000006775 145.0
BYD3_k127_67566_7 domain, Protein - - - 0.00000000000000000000000000000117 141.0
BYD3_k127_67566_9 PFAM SMP-30 Gluconolaconase - - - 0.000000000000008775 89.0
BYD3_k127_6766965_0 Tricorn protease homolog - - - 0.0 1200.0
BYD3_k127_6766965_2 Endonuclease Exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 326.0
BYD3_k127_6766965_3 PFAM Proprotein convertase P-domain - - - 0.000000000000000000000000000000000000000000000111 194.0
BYD3_k127_6766965_4 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.00000000000000000000000000000000000000000001535 167.0
BYD3_k127_6766965_5 guanyl-nucleotide exchange factor activity K20276 - - 0.00000000000000000008848 106.0
BYD3_k127_678899_0 Organic solvent tolerance protein OstA - - - 1.384e-279 886.0
BYD3_k127_678899_1 Histidine ammonia-lyase K01745 - 4.3.1.3 1.244e-266 826.0
BYD3_k127_678899_2 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 379.0
BYD3_k127_678899_3 Acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005616 325.0
BYD3_k127_678899_4 OstA-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 325.0
BYD3_k127_678899_5 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001496 271.0
BYD3_k127_678899_6 N-Acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000001159 257.0
BYD3_k127_678899_7 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000001876 209.0
BYD3_k127_678899_8 Recombinase - - - 0.0000000909 54.0
BYD3_k127_682629_0 lysine biosynthetic process via aminoadipic acid - - - 0.0 1338.0
BYD3_k127_6830420_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 7.705e-236 749.0
BYD3_k127_6830420_1 Oxidoreductase - - - 1.178e-201 638.0
BYD3_k127_6830420_10 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000000000000000000000002607 233.0
BYD3_k127_6830420_11 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000012 195.0
BYD3_k127_6830420_12 acetylesterase activity - - - 0.000000000000000000000000000000000000000000000003299 177.0
BYD3_k127_6830420_13 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000004314 175.0
BYD3_k127_6830420_14 PFAM Transposase IS200 like - - - 0.0000000000000000000000000000000000000000244 158.0
BYD3_k127_6830420_15 response to abiotic stimulus - - - 0.0000000000000000000000000000000000000001282 159.0
BYD3_k127_6830420_16 Uncharacterized protein domain (DUF2202) - - - 0.000000000000000000000000000000000000009215 153.0
BYD3_k127_6830420_17 domain, Protein - - - 0.0000000000000000000000000000000000006256 156.0
BYD3_k127_6830420_18 CHRD domain - - - 0.0000000000000000000000000000000000008448 155.0
BYD3_k127_6830420_19 Nacht domain - - - 0.00000000000000000000000000006463 130.0
BYD3_k127_6830420_2 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 552.0
BYD3_k127_6830420_20 - - - - 0.0000000000000000000000000005109 121.0
BYD3_k127_6830420_21 Universal stress protein - - - 0.0000000000000001512 86.0
BYD3_k127_6830420_24 amine dehydrogenase activity - - - 0.00000000945 62.0
BYD3_k127_6830420_25 - - - - 0.0000000419 63.0
BYD3_k127_6830420_26 - - - - 0.0000004949 53.0
BYD3_k127_6830420_3 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 479.0
BYD3_k127_6830420_4 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 439.0
BYD3_k127_6830420_5 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 397.0
BYD3_k127_6830420_6 PFAM C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009184 376.0
BYD3_k127_6830420_7 SPTR Cell surface protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006998 380.0
BYD3_k127_6830420_8 Ribonuclease K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 294.0
BYD3_k127_6830420_9 Transposase IS116/IS110/IS902 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003181 253.0
BYD3_k127_6833281_0 TonB-dependent Receptor Plug K02014 - - 2.44e-244 781.0
BYD3_k127_6833281_1 PAP2 superfamily - - - 1.168e-211 663.0
BYD3_k127_6833281_2 PFAM NAD dependent epimerase dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 570.0
BYD3_k127_6833281_3 regulator of cell autolysis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 302.0
BYD3_k127_6833281_4 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 286.0
BYD3_k127_6833281_5 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005235 256.0
BYD3_k127_6833521_0 PFAM sulfatase - - - 9.297e-265 831.0
BYD3_k127_6833521_1 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 4.524e-218 685.0
BYD3_k127_6833521_2 COGs COG1253 Hemolysins and related protein containing CBS domains K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 585.0
BYD3_k127_6833521_3 Thiopurine S-methyltransferase (TPMT) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006033 326.0
BYD3_k127_6833521_4 Protein of unknown function (DUF4256) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 310.0
BYD3_k127_6833521_5 Phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000005517 201.0
BYD3_k127_6846172_0 Glycosyl hydrolase family 26 K01218 - 3.2.1.78 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 502.0
BYD3_k127_6846172_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 429.0
BYD3_k127_6846172_10 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000002524 149.0
BYD3_k127_6846172_13 monooxygenase activity - - - 0.00000000000000000000000000000001198 134.0
BYD3_k127_6846172_14 monooxygenase activity - - - 0.000000000000000000000000000002157 132.0
BYD3_k127_6846172_15 monooxygenase activity - - - 0.00000000000000000000000005001 119.0
BYD3_k127_6846172_16 - - - - 0.0000000000000129 82.0
BYD3_k127_6846172_2 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000065 368.0
BYD3_k127_6846172_3 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 356.0
BYD3_k127_6846172_4 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 325.0
BYD3_k127_6846172_5 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007005 310.0
BYD3_k127_6846172_6 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 288.0
BYD3_k127_6846172_7 SdpI/YhfL protein family - - - 0.00000000000000000000000000000000000000005033 160.0
BYD3_k127_6846172_8 Haem-degrading - - - 0.00000000000000000000000000000000000002598 148.0
BYD3_k127_6846172_9 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000004897 138.0
BYD3_k127_685622_0 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 405.0
BYD3_k127_685622_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008735 367.0
BYD3_k127_685900_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1180.0
BYD3_k127_685900_1 Sigma-54 interaction domain K03405 - 6.6.1.1 1.464e-259 807.0
BYD3_k127_685900_10 PFAM Biopolymer transport protein ExbD TolR - - - 0.000000000000000001843 91.0
BYD3_k127_685900_11 PFAM RNA polymerase sigma factor 70, region 4 type 2 - - - 0.000000000791 66.0
BYD3_k127_685900_12 Domain of unknown function (DUF4258) - - - 0.0000009533 56.0
BYD3_k127_685900_2 2-methylthioadenine synthetase K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000739 526.0
BYD3_k127_685900_3 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006866 460.0
BYD3_k127_685900_4 Alpha amylase, catalytic domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 389.0
BYD3_k127_685900_5 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009812 323.0
BYD3_k127_685900_6 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006058 275.0
BYD3_k127_685900_7 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005812 243.0
BYD3_k127_685900_8 Domain of unknown function (DUF4258) - - - 0.00000000000000000000000000003485 123.0
BYD3_k127_685900_9 Gcn5-related n-acetyltransferase - - - 0.0000000000000000008608 94.0
BYD3_k127_68960_0 Domain of unknown function (DUF5117) - - - 0.0 1020.0
BYD3_k127_68960_1 Asparagine synthase K01953 - 6.3.5.4 2.017e-232 734.0
BYD3_k127_68960_10 Acyl carrier protein phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000001066 220.0
BYD3_k127_68960_11 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000001762 189.0
BYD3_k127_68960_14 - - - - 0.000000000000000008997 87.0
BYD3_k127_68960_15 - - - - 0.00000000000009496 72.0
BYD3_k127_68960_16 - - - - 0.0000000000005985 74.0
BYD3_k127_68960_2 PFAM Cys Met metabolism K01739,K01758,K01760 - 2.5.1.48,4.4.1.1,4.4.1.8 1.521e-206 647.0
BYD3_k127_68960_3 Deoxyhypusine synthase K00809 - 2.5.1.46 1.3e-199 623.0
BYD3_k127_68960_4 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008489 530.0
BYD3_k127_68960_5 Protein of unknown function (DUF2400) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000898 348.0
BYD3_k127_68960_6 Fatty acid hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 282.0
BYD3_k127_68960_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004161 270.0
BYD3_k127_68960_8 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001916 237.0
BYD3_k127_68960_9 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000002449 220.0
BYD3_k127_6957317_0 Zinc carboxypeptidase - - - 4.654e-283 893.0
BYD3_k127_6957317_1 Tetratricopeptide repeat - - - 8.237e-279 870.0
BYD3_k127_6957317_10 Aspartyl protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 450.0
BYD3_k127_6957317_11 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008981 448.0
BYD3_k127_6957317_12 Protein of unknown function (DUF418) K07148 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 442.0
BYD3_k127_6957317_13 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008668 347.0
BYD3_k127_6957317_14 Collagen triple helix repeat (20 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 346.0
BYD3_k127_6957317_15 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002389 258.0
BYD3_k127_6957317_16 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000001758 228.0
BYD3_k127_6957317_17 Hep Hag repeat protein K12056 - - 0.0000000000000000000000000000000000000000000000000002231 213.0
BYD3_k127_6957317_18 DoxX family - - - 0.0000000000000000000000000000000000000000000000001954 181.0
BYD3_k127_6957317_19 - - - - 0.0000000000000000000000000000000002769 141.0
BYD3_k127_6957317_2 Tetratricopeptide repeat - - - 1.027e-269 844.0
BYD3_k127_6957317_22 - - - - 0.0000000000000000000000000000004823 132.0
BYD3_k127_6957317_24 PFAM membrane protein of K08972 - - 0.000000000000000000000000000001373 124.0
BYD3_k127_6957317_25 - - - - 0.00000000000000000000000000001026 127.0
BYD3_k127_6957317_27 - - - - 0.00000000000000000000001146 106.0
BYD3_k127_6957317_28 - - - - 0.00000000000000000000009049 107.0
BYD3_k127_6957317_3 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 6.072e-229 716.0
BYD3_k127_6957317_30 - - - - 0.00000000000000003149 91.0
BYD3_k127_6957317_31 - - - - 0.000000008484 63.0
BYD3_k127_6957317_32 cell wall surface anchor family protein - - - 0.0002557 55.0
BYD3_k127_6957317_4 Radical SAM K11784 - 1.21.98.1 5.07e-222 691.0
BYD3_k127_6957317_5 Beta-lactamase - - - 4.613e-208 659.0
BYD3_k127_6957317_6 Peptidase M16 K07263 - - 7.995e-205 643.0
BYD3_k127_6957317_7 Peptidase M16 - - - 1.104e-196 620.0
BYD3_k127_6957317_8 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 551.0
BYD3_k127_6957317_9 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556 452.0
BYD3_k127_6969182_0 Mur ligase family, catalytic domain - - - 3.866e-207 653.0
BYD3_k127_6969182_1 COG1228 Imidazolonepropionase and related K01468 - 3.5.2.7 2.834e-195 615.0
BYD3_k127_6969182_10 DinB family - - - 0.00000000000000000000000000000000000000000000000000000207 196.0
BYD3_k127_6969182_11 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.00000000000000000000000000000000000000000000000003356 184.0
BYD3_k127_6969182_12 1,4-alpha-glucan branching enzyme activity K00700 - 2.4.1.18 0.000000000000000000000000000000000000000003122 156.0
BYD3_k127_6969182_13 RibD C-terminal domain K00287 - 1.5.1.3 0.000000000000000000000000000000000000000004431 160.0
BYD3_k127_6969182_15 - - - - 0.000000000000000000000000000000000005831 139.0
BYD3_k127_6969182_16 COG3209 Rhs family protein - - - 0.0000000000000000001276 100.0
BYD3_k127_6969182_17 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000001086 88.0
BYD3_k127_6969182_2 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 462.0
BYD3_k127_6969182_3 alcohol dehydrogenase K13979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 444.0
BYD3_k127_6969182_4 Trehalose utilisation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008476 413.0
BYD3_k127_6969182_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005657 362.0
BYD3_k127_6969182_6 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 357.0
BYD3_k127_6969182_7 PFAM HhH-GPD superfamily base excision DNA repair protein K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 327.0
BYD3_k127_6969182_8 Glycosyl hydrolases family 16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008438 305.0
BYD3_k127_6969182_9 GCN5 family acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000214 223.0
BYD3_k127_697828_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 346.0
BYD3_k127_698159_0 PFAM ASPIC and UnbV - - - 7.642e-212 668.0
BYD3_k127_698159_1 PFAM RagB SusD domain protein K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009974 613.0
BYD3_k127_698159_2 Concanavalin A-like lectin/glucanases superfamily - - - 0.00000000000000000000000000000000000006681 154.0
BYD3_k127_6986179_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 1.745e-204 647.0
BYD3_k127_6986179_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000007928 117.0
BYD3_k127_701461_0 InterPro IPR003838 - - - 0.0 1196.0
BYD3_k127_701461_1 MacB-like periplasmic core domain K02004 - - 0.0 1069.0
BYD3_k127_701461_10 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000001493 117.0
BYD3_k127_701461_2 MacB-like periplasmic core domain - - - 1.927e-321 1001.0
BYD3_k127_701461_3 MacB-like periplasmic core domain K02004 - - 8.636e-314 980.0
BYD3_k127_701461_4 MacB-like periplasmic core domain K02004 - - 1.445e-302 947.0
BYD3_k127_701461_5 MacB-like periplasmic core domain - - - 5.215e-281 884.0
BYD3_k127_701461_6 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 7.406e-259 821.0
BYD3_k127_701461_7 TIGRFAM Acidobacterial duplicated orphan permease K02004 - - 3.384e-252 801.0
BYD3_k127_701461_8 MacB-like periplasmic core domain - - - 1.666e-198 645.0
BYD3_k127_701461_9 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000001462 162.0
BYD3_k127_7018774_0 TonB dependent receptor - - - 0.0 1266.0
BYD3_k127_7018774_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 2.032e-318 988.0
BYD3_k127_7018774_10 PFAM periplasmic binding protein LacI transcriptional regulator K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 475.0
BYD3_k127_7018774_11 PFAM Pectinesterase K01051 - 3.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 479.0
BYD3_k127_7018774_12 lacI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009504 390.0
BYD3_k127_7018774_13 COG0657 Esterase lipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008156 349.0
BYD3_k127_7018774_14 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007434 328.0
BYD3_k127_7018774_15 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009461 312.0
BYD3_k127_7018774_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 327.0
BYD3_k127_7018774_17 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000000000000009232 201.0
BYD3_k127_7018774_18 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000000000000003566 158.0
BYD3_k127_7018774_2 Belongs to the glycosyl hydrolase 43 family - - - 5.347e-255 795.0
BYD3_k127_7018774_3 PFAM glycoside hydrolase family 28 - - - 2.629e-236 738.0
BYD3_k127_7018774_4 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 2.18e-232 730.0
BYD3_k127_7018774_5 SusD family K21572 - - 1.002e-221 702.0
BYD3_k127_7018774_6 Oxidoreductase family, C-terminal alpha beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 610.0
BYD3_k127_7018774_7 Pectate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 593.0
BYD3_k127_7018774_8 Peptidase family M1 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 558.0
BYD3_k127_7018774_9 Oxidoreductase family, C-terminal alpha/beta domain K16044 - 1.1.1.371 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 490.0
BYD3_k127_702529_0 Protein of unknown function (DUF2851) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 532.0
BYD3_k127_702529_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 518.0
BYD3_k127_702529_10 FeS assembly protein IscX - - - 0.000000000000000000000000000000000000000000007497 163.0
BYD3_k127_702529_11 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000009099 150.0
BYD3_k127_702529_2 UbiA prenyltransferase family K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 319.0
BYD3_k127_702529_3 NADP oxidoreductase coenzyme F420-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004917 280.0
BYD3_k127_702529_4 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001535 264.0
BYD3_k127_702529_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003301 246.0
BYD3_k127_702529_6 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006545 247.0
BYD3_k127_702529_7 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000000001241 219.0
BYD3_k127_702529_8 PFAM OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000000001391 204.0
BYD3_k127_702529_9 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000000000000000000000000000003004 189.0
BYD3_k127_7043305_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1373.0
BYD3_k127_7043305_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0 1134.0
BYD3_k127_7043305_10 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 434.0
BYD3_k127_7043305_11 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008986 394.0
BYD3_k127_7043305_12 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 362.0
BYD3_k127_7043305_13 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004849 352.0
BYD3_k127_7043305_14 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 350.0
BYD3_k127_7043305_15 Hydrolase with alpha beta fold protein K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008423 327.0
BYD3_k127_7043305_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 305.0
BYD3_k127_7043305_17 PFAM Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000000000000000214 223.0
BYD3_k127_7043305_18 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000008218 224.0
BYD3_k127_7043305_19 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000001847 179.0
BYD3_k127_7043305_2 alpha/beta hydrolase fold K07214 - - 5.234e-212 671.0
BYD3_k127_7043305_20 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000009087 158.0
BYD3_k127_7043305_3 PFAM Peptidase M19, renal dipeptidase K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 589.0
BYD3_k127_7043305_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005817 621.0
BYD3_k127_7043305_5 Transport of potassium into the cell K03549 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007414 575.0
BYD3_k127_7043305_6 LD-carboxypeptidase K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 485.0
BYD3_k127_7043305_7 peptidase K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000625 467.0
BYD3_k127_7043305_8 PFAM Alanine racemase, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 464.0
BYD3_k127_7043305_9 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 444.0
BYD3_k127_7052310_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1178.0
BYD3_k127_7052310_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005676 497.0
BYD3_k127_7052310_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005134 375.0
BYD3_k127_7052310_3 MGS-like domain K01734 - 4.2.3.3 0.000000000000000000000000000000000000000000000000000000000000001478 220.0
BYD3_k127_7052310_4 Belongs to the UPF0312 family - - - 0.00000000000000000085 93.0
BYD3_k127_7052310_5 tRNA_anti-like - - - 0.000004854 56.0
BYD3_k127_7099362_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 4.229e-271 840.0
BYD3_k127_7099362_1 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 522.0
BYD3_k127_7099362_2 Fatty acid hydroxylase - - - 0.000000000000007746 82.0
BYD3_k127_714455_0 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 0.0 1055.0
BYD3_k127_714455_1 peptidase M24 K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 535.0
BYD3_k127_714455_2 protein related to plant photosystem II stability assembly factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000063 389.0
BYD3_k127_714455_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001832 267.0
BYD3_k127_714455_4 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000452 196.0
BYD3_k127_714455_5 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000008299 198.0
BYD3_k127_7159939_0 Carboxypeptidase regulatory-like domain - - - 2.236e-300 941.0
BYD3_k127_7159939_1 Glucosamine-6-phosphate K02564 - 3.5.99.6 6.005e-234 727.0
BYD3_k127_7159939_2 peptidase - - - 4.217e-199 637.0
BYD3_k127_7159939_3 Asparaginase K13051 - 3.4.19.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 403.0
BYD3_k127_7159939_4 competence protein COMEC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 329.0
BYD3_k127_7159939_5 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000006211 261.0
BYD3_k127_7159939_6 - - - - 0.00000000001228 74.0
BYD3_k127_7167653_0 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000112 210.0
BYD3_k127_7167653_1 - - - - 0.0000000000000000000000000000000729 131.0
BYD3_k127_7168522_0 PFAM ASPIC and UnbV - - - 1.8e-263 827.0
BYD3_k127_7168522_1 protein conserved in bacteria (DUF2329) - - - 6.893e-228 717.0
BYD3_k127_7168522_2 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000008601 183.0
BYD3_k127_7204478_0 ABC transporter K15738 - - 2.273e-298 926.0
BYD3_k127_7204478_1 PFAM Major Facilitator Superfamily - - - 6.966e-200 629.0
BYD3_k127_7204478_10 AhpC/TSA family - - - 0.0000000000000000000000000000002584 128.0
BYD3_k127_7204478_2 hemolysin activation secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 615.0
BYD3_k127_7204478_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006699 582.0
BYD3_k127_7204478_4 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 488.0
BYD3_k127_7204478_5 Glycosyl transferase, family 9 K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 479.0
BYD3_k127_7204478_6 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006448 377.0
BYD3_k127_7204478_7 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 325.0
BYD3_k127_7204478_8 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000007535 216.0
BYD3_k127_7204478_9 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000000000000003019 216.0
BYD3_k127_7213433_0 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 459.0
BYD3_k127_7213433_1 FIST N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 456.0
BYD3_k127_7213433_2 FIST N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 407.0
BYD3_k127_7213433_3 FIST_C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 360.0
BYD3_k127_7226046_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0 1089.0
BYD3_k127_7226046_1 decarboxylase K01585 - 4.1.1.19 5.089e-280 863.0
BYD3_k127_7226046_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008084 252.0
BYD3_k127_7226046_11 Belongs to the UPF0403 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001084 243.0
BYD3_k127_7226046_12 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000000000002599 230.0
BYD3_k127_7226046_13 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000004326 213.0
BYD3_k127_7226046_14 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000002933 194.0
BYD3_k127_7226046_15 - - - - 0.0000000000000000000000000000000000000000000001638 182.0
BYD3_k127_7226046_16 - - - - 0.0000000000000000000000000000000000000000000007161 171.0
BYD3_k127_7226046_17 PFAM Uncharacterised BCR, COG1649 - - - 0.00000000000000000000000000000000000000007052 170.0
BYD3_k127_7226046_18 YjbR - - - 0.00000000000000000000000000000000001304 139.0
BYD3_k127_7226046_19 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000005417 138.0
BYD3_k127_7226046_2 Peptidase family M28 - - - 3.487e-235 737.0
BYD3_k127_7226046_20 Cytochrome c - - - 0.00000000000000000000000000461 114.0
BYD3_k127_7226046_21 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000724 102.0
BYD3_k127_7226046_22 domain, Protein - - - 0.000000000001704 80.0
BYD3_k127_7226046_23 domain, Protein - - - 0.0000000001481 74.0
BYD3_k127_7226046_24 - - - - 0.0000001463 59.0
BYD3_k127_7226046_26 TonB-linked outer membrane protein, SusC RagA family - - - 0.00005545 54.0
BYD3_k127_7226046_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 536.0
BYD3_k127_7226046_4 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 477.0
BYD3_k127_7226046_5 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 385.0
BYD3_k127_7226046_6 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003767 324.0
BYD3_k127_7226046_7 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006772 325.0
BYD3_k127_7226046_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005225 327.0
BYD3_k127_7232367_0 TonB dependent receptor K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002364 265.0
BYD3_k127_7232367_1 TonB-dependent receptor K02014 - - 0.000000006668 57.0
BYD3_k127_7270260_0 peptidase K01278 - 3.4.14.5 4.135e-300 935.0
BYD3_k127_7270260_1 ABC transporter K06147,K11085 - - 9.898e-268 836.0
BYD3_k127_7270260_10 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000003122 245.0
BYD3_k127_7270260_11 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000331 220.0
BYD3_k127_7270260_12 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000003743 229.0
BYD3_k127_7270260_13 Protein of unknown function (DUF3078) - - - 0.0000000000000000000000000000000000000000000000000000000008928 212.0
BYD3_k127_7270260_14 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000000000000000000004602 198.0
BYD3_k127_7270260_15 TIGRFAM Peroxiredoxin, osmotically inducible protein C, subgroup K04063 - - 0.0000000000000000000000000000000000000000000003501 171.0
BYD3_k127_7270260_16 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000000000000004724 170.0
BYD3_k127_7270260_17 - - - - 0.00000000000000000000000000000000000000002435 159.0
BYD3_k127_7270260_18 Class III cytochrome C family - - - 0.000000000000000009393 89.0
BYD3_k127_7270260_2 Transketolase K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 465.0
BYD3_k127_7270260_3 ABC-type transport system involved in lipoprotein release permease component K09808,K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 435.0
BYD3_k127_7270260_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 394.0
BYD3_k127_7270260_5 Polyphosphate nucleotide phosphotransferase, PPK2 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 389.0
BYD3_k127_7270260_6 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000514 279.0
BYD3_k127_7270260_8 Protein of unknown function (DUF3078) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002769 259.0
BYD3_k127_7270260_9 Protein of unknown function (DUF3078) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002506 252.0
BYD3_k127_727547_0 Carbamoyl-phosphate synthase K01955 - 6.3.5.5 0.0 1635.0
BYD3_k127_727547_1 Two component regulator three Y - - - 0.0 1101.0
BYD3_k127_727547_10 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 497.0
BYD3_k127_727547_11 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004784 419.0
BYD3_k127_727547_12 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 359.0
BYD3_k127_727547_13 mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 359.0
BYD3_k127_727547_14 drug metabolite-transporting permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 348.0
BYD3_k127_727547_15 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 321.0
BYD3_k127_727547_16 Protein of unknown function (DUF3109) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 312.0
BYD3_k127_727547_17 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 301.0
BYD3_k127_727547_18 PFAM Uncharacterised ACR, YkgG family COG1556 K00782 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002065 274.0
BYD3_k127_727547_19 PFAM Biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000000004925 257.0
BYD3_k127_727547_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 7.636e-316 980.0
BYD3_k127_727547_20 Alpha beta hydrolase K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000001958 253.0
BYD3_k127_727547_21 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008665 248.0
BYD3_k127_727547_22 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000003501 234.0
BYD3_k127_727547_23 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000003467 214.0
BYD3_k127_727547_24 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000000000000005053 195.0
BYD3_k127_727547_25 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000009901 188.0
BYD3_k127_727547_26 regulation of ryanodine-sensitive calcium-release channel activity - - - 0.000000000000000000000000000000000000000000000004194 181.0
BYD3_k127_727547_27 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000000000000000000000000000000000000001668 165.0
BYD3_k127_727547_28 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03673,K03981 - 5.3.4.1 0.000000000000000000000000000008989 131.0
BYD3_k127_727547_29 Dna alkylation repair - - - 0.00000000000000000000000000002133 124.0
BYD3_k127_727547_3 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 6.827e-260 807.0
BYD3_k127_727547_30 Domain of unknown function (DUF4249) - - - 0.000000000000000000000004309 113.0
BYD3_k127_727547_31 DinB superfamily - - - 0.00000000000000000003441 96.0
BYD3_k127_727547_32 Tetratricopeptide repeats - - - 0.000000000000002867 87.0
BYD3_k127_727547_33 - - - - 0.0000000555 63.0
BYD3_k127_727547_4 iron-sulfur cluster-binding protein K18929 - - 4.04e-238 742.0
BYD3_k127_727547_5 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 629.0
BYD3_k127_727547_6 TIGRFAM ComEC Rec2-related protein K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 620.0
BYD3_k127_727547_7 PFAM metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 584.0
BYD3_k127_727547_8 Peptidase, M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004196 517.0
BYD3_k127_727547_9 SPTR Phosphoesterase, PA-phosphatase related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 496.0
BYD3_k127_7297166_0 Bacterial protein of unknown function (DUF853) K06915 - - 2.005e-260 811.0
BYD3_k127_7297166_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004666 290.0
BYD3_k127_7297166_2 PFAM Chaperonin Cpn10 - - - 0.0000000000000000000000006344 104.0
BYD3_k127_7304924_0 Carboxypeptidase regulatory-like domain - - - 0.0 1426.0
BYD3_k127_7304924_1 Belongs to the FGGY kinase family K00851 - 2.7.1.12 1.465e-264 822.0
BYD3_k127_7304924_2 Pfam:Methyltransf_6 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000674 511.0
BYD3_k127_7304924_3 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 409.0
BYD3_k127_7304924_4 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 381.0
BYD3_k127_7304924_5 Mandelate racemase muconate lactonizing enzyme, N-terminal - - - 0.0000000000000000425 83.0
BYD3_k127_7377194_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 431.0
BYD3_k127_7377194_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000001603 236.0
BYD3_k127_7377194_2 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000004358 214.0
BYD3_k127_7377194_4 - - - - 0.00000000000000000000000000000000000003945 147.0
BYD3_k127_7377194_5 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 0.000000000000003177 76.0
BYD3_k127_7422757_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K00615 - 2.2.1.1 0.0 1157.0
BYD3_k127_7422757_1 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008615 496.0
BYD3_k127_7422757_2 Phenazine biosynthesis-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007801 349.0
BYD3_k127_7422757_3 Response regulator of the LytR AlgR family K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001418 267.0
BYD3_k127_7422757_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001614 283.0
BYD3_k127_7422757_5 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000001914 244.0
BYD3_k127_7423297_0 amidohydrolase - - - 0.0 1369.0
BYD3_k127_7423297_1 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 531.0
BYD3_k127_7423297_2 DeoC/LacD family aldolase K01619 - 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 460.0
BYD3_k127_7423297_3 Ion transport protein K10716 - - 0.000000000000000000000000000419 115.0
BYD3_k127_743515_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 545.0
BYD3_k127_743515_1 DNA polymerase III K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004109 436.0
BYD3_k127_743515_2 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000605 409.0
BYD3_k127_743515_3 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 393.0
BYD3_k127_743515_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 359.0
BYD3_k127_743515_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006107 309.0
BYD3_k127_743515_6 PFAM class II aldolase adducin family protein K01628 - 4.1.2.17 0.0000000000000000000000000000000000579 137.0
BYD3_k127_743515_7 - - - - 0.00000001514 63.0
BYD3_k127_743867_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.09e-199 659.0
BYD3_k127_743867_1 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.00001206 47.0
BYD3_k127_7524476_0 Domain of unknown function (DUF5117) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 467.0
BYD3_k127_7524476_1 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000005618 124.0
BYD3_k127_7527211_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1483.0
BYD3_k127_7527211_1 TonB dependent receptor - - - 0.0 1128.0
BYD3_k127_7527211_10 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000713 436.0
BYD3_k127_7527211_11 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007122 385.0
BYD3_k127_7527211_12 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 385.0
BYD3_k127_7527211_13 Thymidylate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007643 374.0
BYD3_k127_7527211_14 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007773 374.0
BYD3_k127_7527211_15 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 349.0
BYD3_k127_7527211_16 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 319.0
BYD3_k127_7527211_17 regulation of DNA-templated transcription, elongation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 327.0
BYD3_k127_7527211_18 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003552 255.0
BYD3_k127_7527211_19 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001879 265.0
BYD3_k127_7527211_2 TonB-dependent receptor plug K02014 - - 0.0 1052.0
BYD3_k127_7527211_20 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000001456 228.0
BYD3_k127_7527211_21 COGs COG3279 Response regulator of the LytR AlgR family - - - 0.00000000000000000000000000000000000000000000000000000000001292 214.0
BYD3_k127_7527211_22 PFAM Acetyltransferase (GNAT) family K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000001795 185.0
BYD3_k127_7527211_23 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000001878 178.0
BYD3_k127_7527211_24 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000001289 168.0
BYD3_k127_7527211_25 Domain of unknown function (DUF4399) - - - 0.0000000000000000000000000000000000000000002302 163.0
BYD3_k127_7527211_26 COGs COG5616 integral membrane protein - - - 0.0000000000000000000000000000000000000003205 155.0
BYD3_k127_7527211_27 Ketosteroid isomerase-related protein - - - 0.0000000000000000000000000001589 121.0
BYD3_k127_7527211_3 Peptidase M61 - - - 6.466e-218 691.0
BYD3_k127_7527211_30 COGs COG5616 integral membrane protein - - - 0.000008596 49.0
BYD3_k127_7527211_4 signal peptide peptidase SppA, 67K type K04773 - - 3.153e-212 675.0
BYD3_k127_7527211_5 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 612.0
BYD3_k127_7527211_6 Pectate lyase superfamily protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 586.0
BYD3_k127_7527211_7 ABC1 family K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 579.0
BYD3_k127_7527211_8 Starch-binding associating with outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007037 463.0
BYD3_k127_7527211_9 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 444.0
BYD3_k127_7530681_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 1.484e-290 910.0
BYD3_k127_7530681_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 2.066e-200 629.0
BYD3_k127_7530681_2 Modulates RecA activity K03565 - - 0.000000000000000000000000000000000000000000000000001619 186.0
BYD3_k127_7539273_0 Protein of unknown function (DUF2723) - - - 7.219e-261 832.0
BYD3_k127_7543089_0 SPTR ASPIC UnbV domain protein - - - 0.0 1157.0
BYD3_k127_7543089_1 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003357 481.0
BYD3_k127_7543089_2 Pfam Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 0.00000000000000000035 90.0
BYD3_k127_755111_0 PFAM Glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0 1121.0
BYD3_k127_755111_1 Mandelate racemase muconate lactonizing enzyme K01776,K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20,5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 500.0
BYD3_k127_755111_2 - - - - 0.00000000000000000000000000000000008948 137.0
BYD3_k127_755111_4 - - - - 0.000001192 57.0
BYD3_k127_7551542_0 Lycopene cyclase protein K06443 - 5.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 366.0
BYD3_k127_7551542_1 Fatty acid hydroxylase K15746 - 1.14.15.24 0.000000000000000000000000000000000000000000000000000000000000000000002522 238.0
BYD3_k127_7551542_2 TIGRFAM isopentenyl-diphosphate delta-isomerase, type 1 K01823 - 5.3.3.2 0.0000002493 52.0
BYD3_k127_7555787_0 AMP-dependent synthetase K01897 - 6.2.1.3 3.837e-251 787.0
BYD3_k127_7555787_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 355.0
BYD3_k127_7555787_2 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003676 273.0
BYD3_k127_7555787_3 ABC-type multidrug transport system ATPase and permease K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002715 260.0
BYD3_k127_7557236_0 Glycogen debranching enzyme - - - 0.0 1531.0
BYD3_k127_7557236_1 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component K02004 - - 0.0 1019.0
BYD3_k127_7557236_10 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 488.0
BYD3_k127_7557236_11 Flavin-binding monooxygenase-like K07222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 442.0
BYD3_k127_7557236_12 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 431.0
BYD3_k127_7557236_13 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 383.0
BYD3_k127_7557236_14 OST-HTH/LOTUS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 369.0
BYD3_k127_7557236_15 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 355.0
BYD3_k127_7557236_16 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006753 357.0
BYD3_k127_7557236_17 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 335.0
BYD3_k127_7557236_18 PFAM HTH domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 329.0
BYD3_k127_7557236_19 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 297.0
BYD3_k127_7557236_2 alpha amylase, catalytic region - - - 8.163e-231 727.0
BYD3_k127_7557236_20 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009355 295.0
BYD3_k127_7557236_21 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005868 250.0
BYD3_k127_7557236_22 Domain of Unknown Function (DUF1543) - - - 0.0000000000000000000000000000000000000000000000000000000000000001081 228.0
BYD3_k127_7557236_23 Cupin superfamily (DUF985) K09705 - - 0.0000000000000000000000000000000000000000000000000000000002002 207.0
BYD3_k127_7557236_24 PFAM DinB - - - 0.000000000000000000000000000000000000000000000000000000001328 204.0
BYD3_k127_7557236_25 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000001031 204.0
BYD3_k127_7557236_26 PAS domain - - - 0.000000000000000000000000000000000000000000000000000001148 195.0
BYD3_k127_7557236_27 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000002117 187.0
BYD3_k127_7557236_28 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000006022 188.0
BYD3_k127_7557236_29 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000003017 175.0
BYD3_k127_7557236_3 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) K16213 - 5.1.3.11 1.86e-209 659.0
BYD3_k127_7557236_30 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.000000000000000000000000000000000000000000001044 166.0
BYD3_k127_7557236_31 - - - - 0.00000000000000000000000000000000000000004277 155.0
BYD3_k127_7557236_32 Diguanylate cyclase - - - 0.00000000000000000000000000000000000003757 149.0
BYD3_k127_7557236_33 Protein of unknown function (DUF559) - - - 0.0000000000000000000000000000000000000426 146.0
BYD3_k127_7557236_34 - - - - 0.000000000000000000000000000000000002707 140.0
BYD3_k127_7557236_35 Protein of unknown function (DUF1569) - - - 0.000000000000000000000000000000001165 135.0
BYD3_k127_7557236_37 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000003161 120.0
BYD3_k127_7557236_38 Fasciclin domain - - - 0.0000000000000000000000003117 109.0
BYD3_k127_7557236_39 Belongs to the UPF0337 (CsbD) family - - - 0.0000000000000000000005891 98.0
BYD3_k127_7557236_4 C-terminal domain of CHU protein family - - - 6.984e-195 649.0
BYD3_k127_7557236_40 Bor protein - - - 0.0000000000000000001033 93.0
BYD3_k127_7557236_41 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000001109 77.0
BYD3_k127_7557236_42 - - - - 0.0000000000104 70.0
BYD3_k127_7557236_44 helix_turn_helix, Lux Regulon - - - 0.000001686 51.0
BYD3_k127_7557236_45 Tetratricopeptide repeat - - - 0.00002544 57.0
BYD3_k127_7557236_5 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000914 598.0
BYD3_k127_7557236_6 Multidrug ABC transporter ATPase K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 591.0
BYD3_k127_7557236_7 TrkA-C domain K11105 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 545.0
BYD3_k127_7557236_8 Cell surface receptor IPT TIG domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 564.0
BYD3_k127_7557236_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009958 506.0
BYD3_k127_7586088_0 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 592.0
BYD3_k127_7586088_1 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009113 449.0
BYD3_k127_7586088_10 Bacterial transcription activator, effector binding domain - - - 0.000000000000000000000000000000003884 136.0
BYD3_k127_7586088_11 RNA recognition motif - - - 0.0000000000000000000000111 103.0
BYD3_k127_7586088_12 - - - - 0.00000000001187 66.0
BYD3_k127_7586088_13 Universal stress protein family - - - 0.000005806 53.0
BYD3_k127_7586088_2 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 368.0
BYD3_k127_7586088_4 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 331.0
BYD3_k127_7586088_5 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000001406 216.0
BYD3_k127_7586088_6 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000000000000004836 212.0
BYD3_k127_7586088_7 - catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.00000000000000000000000000000000000000000000000000001276 197.0
BYD3_k127_7586088_8 - - - - 0.00000000000000000000000000000000000000000000002405 179.0
BYD3_k127_7586088_9 Domain of unknown function (DUF296) K06934 - - 0.0000000000000000000000000000000000000007621 152.0
BYD3_k127_761916_0 regulator of cell autolysis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 523.0
BYD3_k127_761916_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 454.0
BYD3_k127_761916_2 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 353.0
BYD3_k127_761916_3 TonB-dependent receptor - - - 0.00000000003497 68.0
BYD3_k127_7647729_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 474.0
BYD3_k127_7647729_1 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 312.0
BYD3_k127_7647729_11 - - - - 0.00001995 55.0
BYD3_k127_7647729_12 - - - - 0.0000938 52.0
BYD3_k127_7647729_2 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 302.0
BYD3_k127_7647729_3 peptidase M24B X-Pro dipeptidase aminopeptidase domain protein K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 299.0
BYD3_k127_7647729_4 PFAM Peptidase family S41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 291.0
BYD3_k127_7647729_5 LysM domain - - - 0.0000000000000000000000000000000000000000000000000000000006889 207.0
BYD3_k127_7647729_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000002289 171.0
BYD3_k127_7647729_9 Domain of unknown function (DUF4976) - - - 0.0000004965 54.0
BYD3_k127_7664058_0 domain, Protein - - - 0.000000000000000000000000000000006471 143.0
BYD3_k127_7664058_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000342 108.0
BYD3_k127_7670974_0 choline dehydrogenase activity - - - 3.528e-317 977.0
BYD3_k127_7670974_1 Oxidoreductase - - - 9.912e-230 715.0
BYD3_k127_7670974_2 Gluconate 2-dehydrogenase subunit 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005335 298.0
BYD3_k127_7670974_3 COGs COG1523 Type II secretory pathway pullulanase PulA and related glycosidase K01200 - 3.2.1.41 0.000000000000000000000000000000000000000004182 160.0
BYD3_k127_7694960_0 TonB-dependent Receptor Plug Domain - - - 0.0 1185.0
BYD3_k127_7694960_1 Starch-binding associating with outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 470.0
BYD3_k127_7694960_2 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 316.0
BYD3_k127_7694960_3 Protein of unknown function (DUF3467) - - - 0.0000000000000000000000000000000000000000000000000001898 186.0
BYD3_k127_7694960_4 Domain of unknown function (DUF1735) - - - 0.00000000000000009553 91.0
BYD3_k127_7719_0 Belongs to the arginase family K01479,K12255 - 3.5.3.7,3.5.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008359 528.0
BYD3_k127_7719_1 beta-lactamase - - - 0.00000000000000000000000000000000002427 139.0
BYD3_k127_7730819_0 CarboxypepD_reg-like domain - - - 4.068e-311 973.0
BYD3_k127_7730819_1 Isocitrate isopropylmalate dehydrogenase K00031,K00052 - 1.1.1.42,1.1.1.85 3.633e-280 865.0
BYD3_k127_7730819_10 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003397 337.0
BYD3_k127_7730819_11 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 323.0
BYD3_k127_7730819_12 COGs COG0663 Carbonic anhydrase acetyltransferase isoleucine patch superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 296.0
BYD3_k127_7730819_13 Gliding motility protein, GldB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007495 295.0
BYD3_k127_7730819_14 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000457 237.0
BYD3_k127_7730819_15 translation initiation inhibitor, yjgF family - - - 0.0000000000000000000000000000000000000000000000000000000000000000008799 232.0
BYD3_k127_7730819_16 protein affecting Mg2 Co2 transport K06195 - - 0.00000000000000000000000000000000000000000000000000000000000000003895 224.0
BYD3_k127_7730819_17 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000001089 215.0
BYD3_k127_7730819_18 Haem-binding domain - - - 0.00000000000000000000000000000000000000000000000000009668 192.0
BYD3_k127_7730819_19 Translation initiation factor SUI1 K03113 - - 0.0000000000000000000000000000000000000000000000000003825 185.0
BYD3_k127_7730819_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 2.17e-272 843.0
BYD3_k127_7730819_20 - - - - 0.0000000000000000000000000000000000000000000000003982 179.0
BYD3_k127_7730819_21 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000001309 148.0
BYD3_k127_7730819_22 Domain of unknown function (DUF4783) - - - 0.00000000000000000000000000000005802 128.0
BYD3_k127_7730819_24 Divergent 4Fe-4S mono-cluster - - - 0.00000000000000000000000000002954 119.0
BYD3_k127_7730819_3 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 3.359e-268 835.0
BYD3_k127_7730819_4 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 5.811e-239 746.0
BYD3_k127_7730819_5 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 1.348e-203 646.0
BYD3_k127_7730819_6 TonB dependent receptor K16087 - - 1.672e-203 656.0
BYD3_k127_7730819_7 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 591.0
BYD3_k127_7730819_8 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006083 463.0
BYD3_k127_7730819_9 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 406.0
BYD3_k127_7731471_0 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 347.0
BYD3_k127_7731471_1 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003497 272.0
BYD3_k127_7731471_2 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000009884 204.0
BYD3_k127_7731471_3 Protein of unknown function (DUF3667) K01091 - 3.1.3.18 0.0000000000000000000003344 102.0
BYD3_k127_7738971_0 GDP-mannose 4,6 dehydratase K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009665 436.0
BYD3_k127_7738971_1 glycosyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 332.0
BYD3_k127_7738971_2 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 321.0
BYD3_k127_7738971_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 318.0
BYD3_k127_7738971_4 HAD-hyrolase-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004931 304.0
BYD3_k127_7738971_5 glycerophosphoryl diester phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003227 254.0
BYD3_k127_7738971_6 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006254 250.0
BYD3_k127_7738971_7 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000008686 141.0
BYD3_k127_7738971_8 Glycosyl transferase, family 2 - - - 0.00000000000000000000000001611 114.0
BYD3_k127_7825292_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.413e-257 797.0
BYD3_k127_7825292_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 6.198e-202 633.0
BYD3_k127_7825292_2 Glucose / Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 422.0
BYD3_k127_7825292_3 Permease, YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 421.0
BYD3_k127_7825292_4 TonB-dependent receptor K02014,K16087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003598 250.0
BYD3_k127_7825292_5 SPTR Conserved repeat domain protein - - - 0.0000000000000000000000000000000000000975 163.0
BYD3_k127_7825292_6 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000002806 117.0
BYD3_k127_7843632_0 MacB-like periplasmic core domain K02004 - - 2.45e-312 975.0
BYD3_k127_7843632_1 MacB-like periplasmic core domain K02004 - - 2.565e-280 882.0
BYD3_k127_7843632_2 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 530.0
BYD3_k127_7843632_3 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 530.0
BYD3_k127_7843632_4 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 500.0
BYD3_k127_7884117_0 Sucrose synthase K00696 - 2.4.1.14 3.745e-321 996.0
BYD3_k127_7884117_1 PFAM Cytochrome c assembly protein K02198 - - 5.556e-288 907.0
BYD3_k127_7884117_10 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 506.0
BYD3_k127_7884117_11 Fatty acid desaturase K00508 - 1.14.19.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 488.0
BYD3_k127_7884117_12 PFAM Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 456.0
BYD3_k127_7884117_13 Mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 397.0
BYD3_k127_7884117_14 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000299 360.0
BYD3_k127_7884117_15 GlcNAc-PI de-N-acetylase K01463 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 360.0
BYD3_k127_7884117_16 AMP binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 351.0
BYD3_k127_7884117_17 PFAM sodium hydrogen exchanger - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 311.0
BYD3_k127_7884117_18 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004441 278.0
BYD3_k127_7884117_19 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000001668 266.0
BYD3_k127_7884117_2 acyl-CoA dehydrogenase - - - 2.128e-215 672.0
BYD3_k127_7884117_20 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006421 265.0
BYD3_k127_7884117_21 Dioxygenase K00449 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000000000000000009087 256.0
BYD3_k127_7884117_22 Domain of unknown function (DUF4294) - - - 0.00000000000000000000000000000000000000000000000000000000000000242 226.0
BYD3_k127_7884117_23 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000001734 204.0
BYD3_k127_7884117_24 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000005914 209.0
BYD3_k127_7884117_25 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000001316 175.0
BYD3_k127_7884117_26 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000003401 157.0
BYD3_k127_7884117_27 Membrane - - - 0.00000000000000000000000009597 111.0
BYD3_k127_7884117_28 Protein of unknown function (DUF3303) - - - 0.000000000000000000000007059 103.0
BYD3_k127_7884117_29 PFAM Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000004206 75.0
BYD3_k127_7884117_3 Putative Phosphatase K01079 - 3.1.3.3 1.738e-207 653.0
BYD3_k127_7884117_32 Universal stress protein family - - - 0.0008502 50.0
BYD3_k127_7884117_4 Glycosyl hydrolases family 32 N-terminal domain K01193 - 3.2.1.26 5.318e-206 651.0
BYD3_k127_7884117_5 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 563.0
BYD3_k127_7884117_6 COG1055 Na H antiporter NhaD and related arsenite - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 551.0
BYD3_k127_7884117_7 Belongs to the arginase family K01480 - 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006941 535.0
BYD3_k127_7884117_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 528.0
BYD3_k127_7884117_9 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000805 500.0
BYD3_k127_7887420_0 PFAM PKD domain - - - 0.0 1304.0
BYD3_k127_7887420_1 PFAM PKD domain - - - 0.0 1273.0
BYD3_k127_7887420_10 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 501.0
BYD3_k127_7887420_11 TonB-dependent receptor K02014,K16087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 442.0
BYD3_k127_7887420_12 protein CHP03519, membrane, Bacteroidetes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 375.0
BYD3_k127_7887420_13 Zinc ribbon domain K07164 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 369.0
BYD3_k127_7887420_14 COG1705 Muramidase (flagellum-specific) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 328.0
BYD3_k127_7887420_15 O-methyltransferase K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003155 273.0
BYD3_k127_7887420_16 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000001067 265.0
BYD3_k127_7887420_17 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000005888 232.0
BYD3_k127_7887420_18 water channel activity K02440,K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000787 233.0
BYD3_k127_7887420_19 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000004936 220.0
BYD3_k127_7887420_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.003e-297 924.0
BYD3_k127_7887420_20 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000001606 210.0
BYD3_k127_7887420_21 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000001721 198.0
BYD3_k127_7887420_3 Dehydrogenase K00102,K00104 - 1.1.2.4,1.1.3.15 5.38e-235 733.0
BYD3_k127_7887420_4 May be involved in recombinational repair of damaged DNA K03631 - - 4.95e-222 701.0
BYD3_k127_7887420_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 4.662e-206 645.0
BYD3_k127_7887420_6 PUA domain containing protein K06969 - 2.1.1.191 1.093e-199 628.0
BYD3_k127_7887420_7 von Willebrand factor, type A K07114 - - 4.75e-199 636.0
BYD3_k127_7887420_8 Natural resistance-associated macrophage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 587.0
BYD3_k127_7887420_9 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 558.0
BYD3_k127_7889020_0 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000523 608.0
BYD3_k127_7889020_1 Beta-lactamase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 458.0
BYD3_k127_7889020_2 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 376.0
BYD3_k127_7889020_3 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005627 335.0
BYD3_k127_7889020_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 282.0
BYD3_k127_7889020_5 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000000000005728 235.0
BYD3_k127_7889020_6 Preprotein translocase subunit YajC K03210 - - 0.00000000000000000000000000000000000004856 145.0
BYD3_k127_7889020_7 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000001477 136.0
BYD3_k127_7889020_8 Protein of unknown function (DUF1573) - - - 0.000000000000000000000000002813 117.0
BYD3_k127_7889020_9 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000009625 124.0
BYD3_k127_7917879_0 Cys/Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 554.0
BYD3_k127_7917879_1 COGs COG3653 N-acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 529.0
BYD3_k127_7917879_2 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 509.0
BYD3_k127_7917879_3 Pfam DinB family - - - 0.00000000000000000000000000000000000000000000000002952 184.0
BYD3_k127_7917879_4 Y_Y_Y domain - - - 0.0000000000000000000000001187 118.0
BYD3_k127_794460_0 FAD linked oxidases, C-terminal domain - - - 0.0 1637.0
BYD3_k127_794460_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 9.003e-304 944.0
BYD3_k127_794460_10 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 435.0
BYD3_k127_794460_11 Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009457 426.0
BYD3_k127_794460_12 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 333.0
BYD3_k127_794460_13 Domain of unknown function (DUF4249) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006635 320.0
BYD3_k127_794460_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 310.0
BYD3_k127_794460_15 RNA methyltransferase, RsmD K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 289.0
BYD3_k127_794460_16 CAAX protease self-immunity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004319 268.0
BYD3_k127_794460_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001181 258.0
BYD3_k127_794460_18 Belongs to the aspartate glutamate racemases family K01779 - 5.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000005403 232.0
BYD3_k127_794460_19 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000001559 231.0
BYD3_k127_794460_2 amino acid K03294 - - 9.933e-267 832.0
BYD3_k127_794460_20 - - - - 0.00000000000000000000000000000000000000000000001149 180.0
BYD3_k127_794460_21 PAS fold - - - 0.00000000000000000000000000000000000000000003756 170.0
BYD3_k127_794460_22 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.000000000000000000000000000000000000001327 153.0
BYD3_k127_794460_23 Stress responsive alpha-beta barrel domain protein - - - 0.00000000000000000000000000000000000001001 148.0
BYD3_k127_794460_24 Cupin domain protein - - - 0.0000000000000000000000000000000000004619 145.0
BYD3_k127_794460_25 Ppx GppA phosphatase - - - 0.000000000000000000000000000000000003444 151.0
BYD3_k127_794460_26 ThiS family - - - 0.00000000000000000000000000000000002972 136.0
BYD3_k127_794460_27 Peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.0000000000000000000000000000000001042 139.0
BYD3_k127_794460_29 Proteolipid membrane potential modulator - - - 0.0000000000000000003711 92.0
BYD3_k127_794460_3 cellulose binding - - - 2.352e-200 628.0
BYD3_k127_794460_30 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K00796,K00950,K01633,K13940 - 1.13.11.81,2.5.1.15,2.7.6.3,4.1.2.25,5.1.99.8 0.000000000000000004985 88.0
BYD3_k127_794460_31 Protein of unknown function (DUF3822) - - - 0.00000000000123 78.0
BYD3_k127_794460_4 Protein of unknown function (DUF2961) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 607.0
BYD3_k127_794460_5 Thioredoxin reductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 556.0
BYD3_k127_794460_6 MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 546.0
BYD3_k127_794460_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 532.0
BYD3_k127_794460_8 Smr domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 442.0
BYD3_k127_794460_9 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004846 439.0
BYD3_k127_7966929_0 PFAM RagB SusD domain protein K21572 GO:0000272,GO:0001871,GO:0003674,GO:0005488,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0016052,GO:0030246,GO:0030247,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 500.0
BYD3_k127_7966929_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 466.0
BYD3_k127_7966929_2 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003285 279.0
BYD3_k127_79848_0 WD domain, G-beta repeat - - - 0.000000000000000000000000000000000000000000001293 190.0
BYD3_k127_8104773_0 Oxidoreductase domain protein - - - 3.65e-232 724.0
BYD3_k127_8104773_1 Xylose isomerase K01816 - 5.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007539 469.0
BYD3_k127_8104773_10 23S rRNA-intervening sequence protein - - - 0.0000000000001692 72.0
BYD3_k127_8104773_2 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 420.0
BYD3_k127_8104773_3 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 366.0
BYD3_k127_8104773_4 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009222 364.0
BYD3_k127_8104773_5 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002589 284.0
BYD3_k127_8104773_6 Pfam:DUF59 K02612 - - 0.000000000000000000000000000000000000000000000000000000000000000000001679 239.0
BYD3_k127_8104773_8 Phenylacetic acid degradation B K02610 - - 0.000000000000000000000000000000000000000000000000000000001649 201.0
BYD3_k127_8104773_9 phenylacetic acid degradation protein K02614 - - 0.00000000000000000000000000000000000716 138.0
BYD3_k127_8271509_0 Y_Y_Y domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 543.0
BYD3_k127_8271509_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 366.0
BYD3_k127_8271509_2 response regulator, receiver K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 349.0
BYD3_k127_8271509_3 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 298.0
BYD3_k127_8271509_4 membrane protein (DUF2154) - - - 0.000000000000000000000000000000000000000000000000000000000000001154 228.0
BYD3_k127_8271509_5 Domain of unknown function (DUF4288) - - - 0.000000000000000000000000000000000000001151 150.0
BYD3_k127_8363621_0 GGDEF domain - - - 1.228e-256 842.0
BYD3_k127_8363621_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 527.0
BYD3_k127_8363621_2 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007787 424.0
BYD3_k127_8363621_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 407.0
BYD3_k127_8363621_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 392.0
BYD3_k127_8363621_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009795 377.0
BYD3_k127_8363621_6 Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000001475 185.0
BYD3_k127_8363621_7 PFAM Y_Y_Y domain - - - 0.00000000000000000000005482 117.0
BYD3_k127_8364061_0 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.0 1206.0
BYD3_k127_8364061_1 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005985 440.0
BYD3_k127_8364061_10 Ketosteroid isomerase-related protein - - - 0.000000000000000000000000000000000000000003121 158.0
BYD3_k127_8364061_11 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000000000000000002914 146.0
BYD3_k127_8364061_12 - - - - 0.0000000000000000000000000000000000005345 141.0
BYD3_k127_8364061_13 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000000000003231 137.0
BYD3_k127_8364061_14 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000000000005846 121.0
BYD3_k127_8364061_15 unfolded protein binding K06142 - - 0.00000000000000000000000002138 115.0
BYD3_k127_8364061_16 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000001861 77.0
BYD3_k127_8364061_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 424.0
BYD3_k127_8364061_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 413.0
BYD3_k127_8364061_4 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007022 415.0
BYD3_k127_8364061_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005091 379.0
BYD3_k127_8364061_6 Ion transport protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007957 358.0
BYD3_k127_8364061_7 outer membrane chaperone Skp (OmpH) K06142 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006282 254.0
BYD3_k127_8364061_8 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000007616 226.0
BYD3_k127_8364061_9 DoxX K15977 - - 0.0000000000000000000000000000000000000000000000000002566 188.0
BYD3_k127_8375765_0 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007955 429.0
BYD3_k127_8375765_1 Psort location CytoplasmicMembrane, score 10.00 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 336.0
BYD3_k127_8375765_2 PFAM fumarylacetoacetate (FAA) hydrolase K16171 - 3.7.1.2 0.00000000000000000000008047 100.0
BYD3_k127_8390317_0 alginic acid biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 573.0
BYD3_k127_8390317_1 dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008142 461.0
BYD3_k127_8390317_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 426.0
BYD3_k127_8390317_3 aconitate hydratase K01681 - 4.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 362.0
BYD3_k127_8390317_4 BlaR1 peptidase M56 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 343.0
BYD3_k127_8390317_5 Uncharacterised protein family (UPF0104) K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 294.0
BYD3_k127_8390317_6 Eukaryotic translation initiation factor eIF2A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006397 252.0
BYD3_k127_8390317_7 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000001055 170.0
BYD3_k127_8390317_8 PFAM PspC domain - - - 0.00000000000000000000000000001263 118.0
BYD3_k127_8390317_9 DoxX K15977 - - 0.00000000002399 69.0
BYD3_k127_8404303_0 membrane K07148 - - 0.000000000000000000000000000000001114 144.0
BYD3_k127_8404303_1 Histidine kinase - - - 0.00000000000000000000000031 122.0
BYD3_k127_8404303_2 - - - - 0.000000000009172 68.0
BYD3_k127_8426459_0 PFAM Tetratricopeptide - - - 0.0 1317.0
BYD3_k127_8426459_1 TonB-linked outer membrane protein, SusC RagA family - - - 0.0 1253.0
BYD3_k127_8426459_10 PFAM sulfatase - - - 2.54e-274 850.0
BYD3_k127_8426459_11 Belongs to the glycosyl hydrolase 28 family - - - 1.808e-268 835.0
BYD3_k127_8426459_12 - - - - 2.179e-260 826.0
BYD3_k127_8426459_13 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal K01684 - 4.2.1.6 2.145e-250 775.0
BYD3_k127_8426459_14 C-terminal region of aryl-sulfatase K01130 - 3.1.6.1 3.306e-250 778.0
BYD3_k127_8426459_15 Alpha-L-arabinofuranosidase domain protein K01209 - 3.2.1.55 5.078e-244 762.0
BYD3_k127_8426459_16 SusD family K21572 - - 1.716e-218 691.0
BYD3_k127_8426459_17 Belongs to the FGGY kinase family K00851 - 2.7.1.12 6.386e-218 687.0
BYD3_k127_8426459_18 Putative esterase - - - 1.265e-205 646.0
BYD3_k127_8426459_19 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family K02100,K03444,K08138 - - 1.038e-196 621.0
BYD3_k127_8426459_2 PQQ-like domain - - - 0.0 1160.0
BYD3_k127_8426459_20 Starch-binding associating with outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 612.0
BYD3_k127_8426459_21 Uncharacterized protein conserved in bacteria (DUF2264) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000602 589.0
BYD3_k127_8426459_22 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009312 567.0
BYD3_k127_8426459_23 PFAM Aldehyde dehydrogenase K13877 - 1.2.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007744 563.0
BYD3_k127_8426459_24 SPTR Demethylmenaquinone methyltransferase-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 547.0
BYD3_k127_8426459_25 Pfam Oxidoreductase family, C-terminal alpha beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 553.0
BYD3_k127_8426459_26 Glycosyl Hydrolase Family 88 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008527 544.0
BYD3_k127_8426459_27 Sialate O-acetylesterase K05970 - 3.1.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003992 503.0
BYD3_k127_8426459_28 SPTR Demethylmenaquinone methyltransferase-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 473.0
BYD3_k127_8426459_29 PFAM Bile acid sodium symporter K03453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 473.0
BYD3_k127_8426459_3 TonB dependent receptor - - - 0.0 1046.0
BYD3_k127_8426459_30 Belongs to the glycosyl hydrolase 43 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 403.0
BYD3_k127_8426459_31 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 367.0
BYD3_k127_8426459_32 transcriptional regulator, AraC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 329.0
BYD3_k127_8426459_33 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001202 276.0
BYD3_k127_8426459_34 Voltage gated chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003831 268.0
BYD3_k127_8426459_35 SMP-30 Gluconolaconase LRE-like K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000005126 261.0
BYD3_k127_8426459_36 COGs COG2731 Beta-galactosidase beta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001985 247.0
BYD3_k127_8426459_37 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000007606 233.0
BYD3_k127_8426459_39 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000006064 128.0
BYD3_k127_8426459_4 Belongs to the IlvD Edd family - - - 0.0 1032.0
BYD3_k127_8426459_40 COGs COG3970 Fumarylacetoacetate (FAA) hydrolase family protein K14259 - 4.2.1.141 0.000000000008253 65.0
BYD3_k127_8426459_41 NADPH-dependent FMN reductase - - - 0.00001077 50.0
BYD3_k127_8426459_5 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 5e-324 1002.0
BYD3_k127_8426459_6 Glycosyl-hydrolase 97 N-terminal K01187 - 3.2.1.20 8.132e-295 915.0
BYD3_k127_8426459_7 Right handed beta helix region - - - 1.489e-290 908.0
BYD3_k127_8426459_8 Belongs to the glycosyl hydrolase 43 family K06113 - 3.2.1.99 6.191e-286 881.0
BYD3_k127_8426459_9 Belongs to the glycosyl hydrolase 43 family - - - 9.961e-276 854.0
BYD3_k127_844_0 COGs COG0491 Zn-dependent hydrolase including glyoxylase - - - 4.559e-224 703.0
BYD3_k127_844_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 509.0
BYD3_k127_844_2 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003126 281.0
BYD3_k127_844_3 PFAM Peptidase M22, glycoprotease K14742 - - 0.00000000000000000000000000000000000000000000000000000000000000471 224.0
BYD3_k127_844_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000002433 124.0
BYD3_k127_844_5 Histidine kinase - - - 0.000000000000000000000000000003703 124.0
BYD3_k127_844_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000002236 87.0
BYD3_k127_8447656_0 COGs COG2270 Permease of the major facilitator superfamily K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 586.0
BYD3_k127_8447656_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007065 496.0
BYD3_k127_8447656_2 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 452.0
BYD3_k127_8447656_3 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 394.0
BYD3_k127_8447656_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006267 362.0
BYD3_k127_8447656_5 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 305.0
BYD3_k127_8447656_6 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002014 259.0
BYD3_k127_8447656_7 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000000000000000000000000005073 250.0
BYD3_k127_8448917_0 Berberine and berberine like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 583.0
BYD3_k127_8448917_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 561.0
BYD3_k127_8448917_2 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000004835 254.0
BYD3_k127_8465891_0 Belongs to the GarS family - - - 7.415e-195 621.0
BYD3_k127_8465891_1 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 377.0
BYD3_k127_8465891_2 uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 344.0
BYD3_k127_8465891_3 Glyoxalase-like domain - - - 0.0000000000000000000000000000002498 132.0
BYD3_k127_8465891_4 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 0.00000000000000000000000003801 111.0
BYD3_k127_8465891_5 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000001322 82.0
BYD3_k127_8477580_0 DEAD DEAH box helicase domain protein K05591 - 3.6.4.13 8.579e-204 642.0
BYD3_k127_8477580_1 Belongs to the methyltransferase superfamily K07444 - - 8.481e-197 620.0
BYD3_k127_8477580_2 - - - - 0.0000000000000000000000000000000000000000000004251 168.0
BYD3_k127_8477580_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000004704 164.0
BYD3_k127_8477580_4 MazG nucleotide pyrophosphohydrolase domain - - - 0.0000000000000000003194 89.0
BYD3_k127_849261_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1749.0
BYD3_k127_849261_1 TonB-dependent receptor plug domain - - - 0.0 1157.0
BYD3_k127_849261_10 - - - - 0.0003402 51.0
BYD3_k127_849261_2 COG0308 Aminopeptidase N - - - 1.002e-296 923.0
BYD3_k127_849261_3 P-loop ATPase protein family - - - 5.69e-242 756.0
BYD3_k127_849261_4 Large extracellular alpha-helical protein - - - 1.668e-204 664.0
BYD3_k127_849261_5 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 352.0
BYD3_k127_849261_6 Domain of unknown function (DUF4249) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 343.0
BYD3_k127_849261_7 N-acetylmuramoyl-L-alanine amidase K01447,K11066 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 336.0
BYD3_k127_849261_8 Intracellular protease, PfpI family K05520 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005998 290.0
BYD3_k127_849261_9 DNA alkylation repair enzyme - - - 0.00000000000000000000000000001498 120.0
BYD3_k127_8494064_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 9.368e-251 779.0
BYD3_k127_8494064_1 ATPase (AAA - - - 1.686e-202 636.0
BYD3_k127_8494064_10 Lipopolysaccharide-assembly - - - 0.000000000000000000000000000000000000000000003611 169.0
BYD3_k127_8494064_11 PFAM AhpC TSA family - - - 0.000000000000000000000000000000000000000000673 162.0
BYD3_k127_8494064_12 - - - - 0.0000000000000000000000000000000000000002774 159.0
BYD3_k127_8494064_13 Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000000003356 120.0
BYD3_k127_8494064_2 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 2.481e-195 614.0
BYD3_k127_8494064_3 Dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 499.0
BYD3_k127_8494064_4 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007758 472.0
BYD3_k127_8494064_5 Protein of unknown function, DUF481 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005382 397.0
BYD3_k127_8494064_6 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 357.0
BYD3_k127_8494064_7 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 315.0
BYD3_k127_8494064_8 ribonuclease BN K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007884 305.0
BYD3_k127_8494064_9 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009019 247.0
BYD3_k127_8509495_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 2.16e-277 857.0
BYD3_k127_8509495_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 495.0
BYD3_k127_8509495_2 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 449.0
BYD3_k127_8509495_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 428.0
BYD3_k127_8523512_0 PFAM Glycoside hydrolase, family 37 K01194 - 3.2.1.28 4.51e-237 744.0
BYD3_k127_8523512_1 Alpha amylase, catalytic domain K05341 - 2.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009698 605.0
BYD3_k127_8528005_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1534.0
BYD3_k127_8528005_1 Hydrolase Family 16 - - - 2.886e-232 729.0
BYD3_k127_8528005_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 436.0
BYD3_k127_8528005_3 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000000005581 119.0
BYD3_k127_8528005_4 Transcriptional regulator, HxlR family - - - 0.0000000000000000000000000004778 117.0
BYD3_k127_8541761_0 Cystathionine beta-synthase K01697 - 4.2.1.22 3.136e-272 840.0
BYD3_k127_8541761_1 Fructose-bisphosphate aldolase K01624 - 4.1.2.13 1.495e-212 662.0
BYD3_k127_8541761_10 Cytochrome c - - - 0.000000457 55.0
BYD3_k127_8541761_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 602.0
BYD3_k127_8541761_3 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 573.0
BYD3_k127_8541761_4 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009855 526.0
BYD3_k127_8541761_5 Serine acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 368.0
BYD3_k127_8541761_6 N-acetylglucosamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 310.0
BYD3_k127_8541761_7 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008862 258.0
BYD3_k127_8541761_8 - - - - 0.000000000000000000000000000000000000002928 151.0
BYD3_k127_8541761_9 - - - - 0.0000000000000000000000000001504 118.0
BYD3_k127_8557219_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 542.0
BYD3_k127_8557219_1 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 513.0
BYD3_k127_8557219_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 339.0
BYD3_k127_8557219_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001566 276.0
BYD3_k127_8557219_4 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000167 154.0
BYD3_k127_8557219_5 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000001767 119.0
BYD3_k127_8568533_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.778e-296 912.0
BYD3_k127_8568533_1 TonB-dependent receptor K02014 - - 2.214e-293 921.0
BYD3_k127_8568533_10 Psort location Cytoplasmic, score 8.96 - - - 6.909e-194 611.0
BYD3_k127_8568533_11 DNA mismatch repair protein MutS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002506 588.0
BYD3_k127_8568533_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000383 595.0
BYD3_k127_8568533_13 PFAM Peptidase M1 membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008127 533.0
BYD3_k127_8568533_14 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000829 452.0
BYD3_k127_8568533_15 calcium- and calmodulin-responsive adenylate cyclase activity K01406 - 3.4.24.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 437.0
BYD3_k127_8568533_16 NAD dependent epimerase dehydratase K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009966 418.0
BYD3_k127_8568533_17 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 306.0
BYD3_k127_8568533_18 Ribonuclease H-like K09776 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 294.0
BYD3_k127_8568533_19 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 301.0
BYD3_k127_8568533_2 ABC transporter K06147 - - 1.145e-278 867.0
BYD3_k127_8568533_20 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001958 279.0
BYD3_k127_8568533_21 Belongs to the GbsR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002087 267.0
BYD3_k127_8568533_22 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009681 267.0
BYD3_k127_8568533_23 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000003674 248.0
BYD3_k127_8568533_24 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000009312 236.0
BYD3_k127_8568533_25 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000002814 229.0
BYD3_k127_8568533_26 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000006053 199.0
BYD3_k127_8568533_27 CoA binding domain K06929 - - 0.00000000000000000000000000000000000000000000002305 173.0
BYD3_k127_8568533_28 Glycosyltransferase family 25 (LPS biosynthesis protein) K07270 - - 0.000000000000000000000000000000000000000000006715 172.0
BYD3_k127_8568533_29 Protein of unknown function (DUF2721) - - - 0.000000000000000000000000000000000004855 141.0
BYD3_k127_8568533_3 chelatase, subunit chli K07391 - - 8.401e-277 857.0
BYD3_k127_8568533_30 ATP synthase K02114 - - 0.000000000000000000000000000000000005574 139.0
BYD3_k127_8568533_31 YCII-related domain - - - 0.00000000000000000000000000000438 123.0
BYD3_k127_8568533_32 Sulfurtransferase - - - 0.0000000000000000000000003126 108.0
BYD3_k127_8568533_33 Protein of unknown function (DUF4197) - - - 0.000539 43.0
BYD3_k127_8568533_34 - - - - 0.0009028 47.0
BYD3_k127_8568533_4 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 3.102e-247 780.0
BYD3_k127_8568533_5 L,D-transpeptidase catalytic domain K21470 - - 8.068e-229 720.0
BYD3_k127_8568533_6 Protein of unknown function (DUF1501) - - - 2.618e-220 694.0
BYD3_k127_8568533_7 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 5.06e-220 695.0
BYD3_k127_8568533_8 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 1.757e-213 673.0
BYD3_k127_8568533_9 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 5.548e-205 653.0
BYD3_k127_8574069_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 4.1e-300 927.0
BYD3_k127_8574069_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 550.0
BYD3_k127_8574069_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 453.0
BYD3_k127_8574069_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006225 328.0
BYD3_k127_8574069_4 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000001723 155.0
BYD3_k127_8574069_5 phosphatidylinositol-4-phosphate 5-kinase family protein K00889 K12132 - 2.7.11.1 0.000000000000000000000009226 117.0
BYD3_k127_8574069_6 Cytochrome c - - - 0.0000000000000000001343 90.0
BYD3_k127_8574069_7 - - - - 0.00000006412 64.0
BYD3_k127_8579167_0 B12 binding domain K00548 - 2.1.1.13 0.0 1306.0
BYD3_k127_8579167_1 Belongs to the helicase family. UvrD subfamily K03657 - 3.6.4.12 1.802e-219 687.0
BYD3_k127_8579167_10 LemA family - - - 0.0000000000000000000000000000000000000000000000001558 183.0
BYD3_k127_8579167_2 Methionine synthase K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 550.0
BYD3_k127_8579167_3 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006665 429.0
BYD3_k127_8579167_4 Bacterial Ig-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006635 426.0
BYD3_k127_8579167_5 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008249 388.0
BYD3_k127_8579167_6 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009514 337.0
BYD3_k127_8579167_7 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01560,K07025 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004028 271.0
BYD3_k127_8579167_8 Protein of unknown function (DUF3137) - - - 0.00000000000000000000000000000000000000000000000000000000008887 216.0
BYD3_k127_8579167_9 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000001011 206.0
BYD3_k127_8583268_0 TamB, inner membrane protein subunit of TAM complex - - - 0.0 1316.0
BYD3_k127_8583268_1 PFAM Zinc carboxypeptidase - - - 0.0 1015.0
BYD3_k127_8583268_10 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004888 592.0
BYD3_k127_8583268_11 Amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 588.0
BYD3_k127_8583268_12 Glutathione synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 563.0
BYD3_k127_8583268_13 Tyrosine recombinase XerC K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 494.0
BYD3_k127_8583268_14 Releases the N-terminal proline from various substrates K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 497.0
BYD3_k127_8583268_15 Domain of unknown function K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003248 432.0
BYD3_k127_8583268_16 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 410.0
BYD3_k127_8583268_17 Na+/Pi-cotransporter K03324 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 423.0
BYD3_k127_8583268_18 Large extracellular alpha-helical protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092 396.0
BYD3_k127_8583268_19 GMP synthase-glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 388.0
BYD3_k127_8583268_2 TonB-dependent receptor plug K02014 - - 4.262e-296 936.0
BYD3_k127_8583268_20 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004578 319.0
BYD3_k127_8583268_21 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006369 295.0
BYD3_k127_8583268_22 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003449 261.0
BYD3_k127_8583268_23 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005162 259.0
BYD3_k127_8583268_24 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000819 241.0
BYD3_k127_8583268_25 RDD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000008158 238.0
BYD3_k127_8583268_26 - - - - 0.000000000000000000000000000000000000000000000000000000004635 208.0
BYD3_k127_8583268_27 PFAM Uncharacterised protein family (UPF0153) K06940 - - 0.0000000000000000000000000000000000000000000000000000006863 197.0
BYD3_k127_8583268_28 - - - - 0.0000000000000000000000000000000000000000000000003533 181.0
BYD3_k127_8583268_29 transport - - - 0.0000000000000000000000000000000000000000000003149 181.0
BYD3_k127_8583268_3 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 1.89e-290 897.0
BYD3_k127_8583268_30 -acetyltransferase K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000009208 157.0
BYD3_k127_8583268_31 - - - - 0.00000000000000000000000000000000000001199 145.0
BYD3_k127_8583268_32 COG0202 DNA-directed RNA polymerase, alpha subunit 40 kD subunit - - - 0.00000000000000000000000000000000000001811 145.0
BYD3_k127_8583268_34 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000000000283 131.0
BYD3_k127_8583268_35 PFAM Cupin 2, conserved barrel - - - 0.00000000000000000000000000000005821 127.0
BYD3_k127_8583268_36 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000000000000000000002013 130.0
BYD3_k127_8583268_37 - - - - 0.00000000000000000000000000171 121.0
BYD3_k127_8583268_38 TonB-dependent receptor K02014,K16089 - - 0.000000000000000000000000001855 111.0
BYD3_k127_8583268_39 Pkd domain containing protein - - - 0.00000000000000000000006466 108.0
BYD3_k127_8583268_4 LmbE family - - - 2.598e-285 898.0
BYD3_k127_8583268_40 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000001436 68.0
BYD3_k127_8583268_41 Outer membrane protein beta-barrel domain - - - 0.00000001492 64.0
BYD3_k127_8583268_42 response to heat - - - 0.00006916 51.0
BYD3_k127_8583268_5 Carboxypeptidase regulatory-like domain - - - 1.026e-263 849.0
BYD3_k127_8583268_6 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 2.09e-244 767.0
BYD3_k127_8583268_7 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 1.002e-220 688.0
BYD3_k127_8583268_8 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 1.04e-218 692.0
BYD3_k127_8583268_9 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 8.198e-210 655.0
BYD3_k127_860636_0 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 541.0
BYD3_k127_860636_1 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 344.0
BYD3_k127_860636_2 Metallo-peptidase family M12 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 301.0
BYD3_k127_860636_3 aminotransferase, class I K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006675 285.0
BYD3_k127_860636_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005592 277.0
BYD3_k127_860636_5 - - - - 0.0000000000000000000000000000000000001752 145.0
BYD3_k127_860636_6 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000002086 153.0
BYD3_k127_860636_7 PFAM TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000006375 143.0
BYD3_k127_860636_8 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.000000000000000000000000000002733 126.0
BYD3_k127_860636_9 Putative lumazine-binding - - - 0.000000000000000000000000000416 119.0
BYD3_k127_8621730_0 FAD-dependent dehydrogenase K07137 - - 7.465e-234 732.0
BYD3_k127_8621730_1 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 462.0
BYD3_k127_8621730_2 2-nitropropane dioxygenase K02371 - 1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 456.0
BYD3_k127_8621730_3 ABC-type Na efflux pump, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008853 436.0
BYD3_k127_8621730_4 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 324.0
BYD3_k127_8621730_5 PFAM Phosphoesterase, HXTX - - - 0.0000000000000000000000000000000000000000000000000001261 191.0
BYD3_k127_8621730_6 nuclear chromosome segregation - - - 0.0000000000000000008934 97.0
BYD3_k127_8621730_7 Outer membrane receptor - - - 0.000002282 55.0
BYD3_k127_8646565_0 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 6.021e-250 783.0
BYD3_k127_8646565_1 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 434.0
BYD3_k127_8646565_2 COGs COG4775 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005109 277.0
BYD3_k127_8646565_3 Domain of unknown function (DUF4271) - - - 0.000000000000000000000000000000000000000000000001166 186.0
BYD3_k127_8656399_0 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 529.0
BYD3_k127_8656399_1 PFAM FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 303.0
BYD3_k127_8656399_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000134 226.0
BYD3_k127_8656399_3 TonB-dependent receptor - - - 0.00000000000000000000000000000000000002384 149.0
BYD3_k127_8678664_0 PFAM Multi antimicrobial extrusion protein MatE K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 581.0
BYD3_k127_8678664_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005904 391.0
BYD3_k127_8678664_2 Domain of unknown function (DUF4918) - - - 0.0000000000000000000000000000000000000000000000000000000000000002117 228.0
BYD3_k127_8678664_3 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000002323 105.0
BYD3_k127_8689950_0 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 549.0
BYD3_k127_8689950_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 515.0
BYD3_k127_8689950_10 Cytochrome c - - - 0.0003895 51.0
BYD3_k127_8689950_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000211 155.0
BYD3_k127_8689950_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000007309 130.0
BYD3_k127_8689950_4 Flavodoxin domain - - - 0.0000000000000000000000000003777 120.0
BYD3_k127_8689950_5 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.00000000000000000000000004454 109.0
BYD3_k127_8689950_6 response to oxidative stress - - - 0.000000000000000000001468 100.0
BYD3_k127_8689950_7 YceI-like domain - - - 0.0000000000000004083 88.0
BYD3_k127_8689950_8 Cytochrome c - - - 0.000000000002403 72.0
BYD3_k127_8689950_9 Protein of unknown function (DUF1549) - - - 0.00001775 57.0
BYD3_k127_870871_0 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005459 581.0
BYD3_k127_8760515_0 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001819 248.0
BYD3_k127_8760515_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000008487 246.0
BYD3_k127_8760515_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000116 245.0
BYD3_k127_8760515_3 TonB dependent receptor K02014 - - 0.0000002051 57.0
BYD3_k127_8771971_0 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 548.0
BYD3_k127_8771971_1 GHMP kinases N terminal domain K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004043 536.0
BYD3_k127_8771971_2 glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 472.0
BYD3_k127_8771971_3 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 291.0
BYD3_k127_8771971_4 Nucleotidyl transferase K15669 - 2.7.7.71 0.0000000000000000000000000006088 115.0
BYD3_k127_8800432_0 PFAM Periplasmic copper-binding protein (NosD) K07218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 524.0
BYD3_k127_8800432_1 nitrous oxide K19341 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009395 365.0
BYD3_k127_8800432_2 ABC-type multidrug transport system ATPase component K19340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 355.0
BYD3_k127_8800432_3 lipoprotein involved in nitrous oxide reduction K19342 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 351.0
BYD3_k127_8800432_4 - - - - 0.00000000000000000000000000001438 120.0
BYD3_k127_8800432_5 PFAM Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 0.00000000000000009143 80.0
BYD3_k127_8800535_0 PFAM D-galactarate dehydratase Altronate hydrolase K01685 - 4.2.1.7 1.281e-296 917.0
BYD3_k127_8800535_1 Glucuronate isomerase K01812 - 5.3.1.12 2.962e-248 772.0
BYD3_k127_8800535_2 PFAM Glycosyl Hydrolase Family 88 K15532 - 3.2.1.172 1.671e-238 752.0
BYD3_k127_8800535_3 PFAM Mannitol dehydrogenase C-terminal domain K00009,K00041 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006063,GO:0006082,GO:0008150,GO:0008152,GO:0009026,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046395,GO:0046396,GO:0046397,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 1.1.1.17,1.1.1.58 7.293e-209 660.0
BYD3_k127_8800535_4 Carbohydrate kinase K00874 - 2.7.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 406.0
BYD3_k127_8800535_5 COGs COG4677 Pectin methylesterase K01051 - 3.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007036 376.0
BYD3_k127_8800535_6 Aldolase K01625 - 4.1.2.14,4.1.3.42 0.000000000000000000000000000000000000000000000000000000000000000000001403 240.0
BYD3_k127_8800535_7 PFAM glycoside hydrolase family 28 - - - 0.0000000000000000000000000000000000003436 141.0
BYD3_k127_8805781_0 PFAM Bacterial Fmu (Sun) eukaryotic nucleolar NOL1 Nop2p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 528.0
BYD3_k127_8805781_1 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000003 262.0
BYD3_k127_8805781_2 - - - - 0.0000000000000000004446 93.0
BYD3_k127_8805781_3 PFAM Peptidoglycan-binding lysin domain - - - 0.000000000000009597 78.0
BYD3_k127_8805781_4 - - - - 0.000004655 54.0
BYD3_k127_8808991_0 Carbohydrate family 9 binding domain-like - - - 8.662e-263 832.0
BYD3_k127_8808991_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 464.0
BYD3_k127_8808991_10 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000894 222.0
BYD3_k127_8808991_11 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000465 157.0
BYD3_k127_8808991_12 Protein of unknown function (DUF1579) - - - 0.0000000000000000000000000000000001093 141.0
BYD3_k127_8808991_13 TfoX N-terminal domain - - - 0.00000000000000000000000000000004047 128.0
BYD3_k127_8808991_14 SRPBCC superfamily protein - - - 0.00000000000000000004251 95.0
BYD3_k127_8808991_16 YCII-related domain - - - 0.00000000000000002505 86.0
BYD3_k127_8808991_17 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000003068 68.0
BYD3_k127_8808991_19 Transposase IS200 like - - - 0.0000002753 52.0
BYD3_k127_8808991_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 444.0
BYD3_k127_8808991_3 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 366.0
BYD3_k127_8808991_4 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 292.0
BYD3_k127_8808991_5 Protein of unknown function (DUF1579) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004014 254.0
BYD3_k127_8808991_6 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000003279 236.0
BYD3_k127_8808991_7 PFAM Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000002242 228.0
BYD3_k127_8808991_8 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000000000000001621 220.0
BYD3_k127_8808991_9 Domain of unknown function (DUF4287) - - - 0.000000000000000000000000000000000000000000000000000000000000002113 222.0
BYD3_k127_8809847_0 Mannosyl oligosaccharide glucosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 467.0
BYD3_k127_8809847_1 Short-chain dehydrogenase reductase SDR K00034 - 1.1.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 375.0
BYD3_k127_8809847_2 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005429 378.0
BYD3_k127_8809847_3 monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000007667 204.0
BYD3_k127_8809847_4 monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000009271 192.0
BYD3_k127_8809847_5 Crp-like helix-turn-helix domain K10914 - - 0.00000000000000000000000000000000000000000000004588 177.0
BYD3_k127_8809847_6 DoxX-like family - - - 0.000000000000000000000000000000000000000001012 160.0
BYD3_k127_8809847_7 Belongs to the thioredoxin family K03671 - - 0.000000000000000000003708 96.0
BYD3_k127_8827015_0 Fibronectin type III domain protein - - - 2.232e-300 940.0
BYD3_k127_8827015_1 Outer membrane protein beta-barrel family - - - 4.468e-298 936.0
BYD3_k127_8827015_2 PFAM Uncharacterised conserved protein UCP016719 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 321.0
BYD3_k127_8827015_3 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 302.0
BYD3_k127_8827015_4 Sigma-70 region 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001351 242.0
BYD3_k127_8827015_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000274 225.0
BYD3_k127_8840677_0 Peptidase, M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 560.0
BYD3_k127_8840677_1 Two component transcriptional regulator, LytTR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 416.0
BYD3_k127_8840677_2 Transposase IS200 like - - - 0.00000000000000000000000000006571 117.0
BYD3_k127_8840677_3 Histidine kinase - - - 0.00000003969 56.0
BYD3_k127_8847255_0 PAP2 superfamily - - - 1.377e-196 620.0
BYD3_k127_8847255_1 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 525.0
BYD3_k127_8847255_11 - - - - 0.00000000000009817 75.0
BYD3_k127_8847255_13 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.0000001925 57.0
BYD3_k127_8847255_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 445.0
BYD3_k127_8847255_3 Beta-lactamase K01286 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 368.0
BYD3_k127_8847255_4 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 317.0
BYD3_k127_8847255_5 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006296 306.0
BYD3_k127_8847255_6 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002048 276.0
BYD3_k127_8847255_7 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000002372 232.0
BYD3_k127_8847255_8 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000009301 194.0
BYD3_k127_8847255_9 Cold shock protein domain - - - 0.0000000000000000000000000000000000000000008319 163.0
BYD3_k127_8848138_0 Sortilin, neurotensin receptor 3, - - - 0.0 1517.0
BYD3_k127_8848138_1 Sortilin, neurotensin receptor 3, - - - 5.891e-319 1006.0
BYD3_k127_8848138_10 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005687 309.0
BYD3_k127_8848138_11 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000137 227.0
BYD3_k127_8848138_12 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000000007345 202.0
BYD3_k127_8848138_13 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12976,K21572 - - 0.000000000000000000000000000000000000000000000000000000009402 206.0
BYD3_k127_8848138_14 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000001412 203.0
BYD3_k127_8848138_15 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.00000000000000000000000000000000000000000000000000000002834 199.0
BYD3_k127_8848138_16 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000000002747 166.0
BYD3_k127_8848138_17 domain, Protein - - - 0.000000000000000000000000000000001726 151.0
BYD3_k127_8848138_18 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000004811 127.0
BYD3_k127_8848138_19 Beta-propeller repeat - - - 0.0000000000000000000000000000007458 143.0
BYD3_k127_8848138_2 Domain of unknown function (DUF4331) - - - 1.388e-286 896.0
BYD3_k127_8848138_3 Peptidase, family M20 M25 M40 - - - 5.748e-247 767.0
BYD3_k127_8848138_4 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 4.158e-219 690.0
BYD3_k127_8848138_5 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009146 528.0
BYD3_k127_8848138_6 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 518.0
BYD3_k127_8848138_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005198 426.0
BYD3_k127_8848138_8 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004671 376.0
BYD3_k127_8848138_9 6-phosphogluconolactonase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005577 322.0
BYD3_k127_8865512_0 Belongs to the heme-copper respiratory oxidase family K15862 - 1.9.3.1 0.0 1039.0
BYD3_k127_8865512_1 cytochrome c oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 561.0
BYD3_k127_8865512_2 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 424.0
BYD3_k127_8865512_3 PFAM Cytochrome c, class I K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000004343 236.0
BYD3_k127_8865512_4 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000000000000000000000000000000000000000000002386 204.0
BYD3_k127_8865512_5 FixH K09926 - - 0.00000000000000000155 92.0
BYD3_k127_8865512_6 PFAM Cbb3-type cytochrome oxidase component FixQ - - - 0.0000000000008461 70.0
BYD3_k127_8888052_0 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 503.0
BYD3_k127_8888052_1 sterol desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 416.0
BYD3_k127_8888052_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979,K19714 - 1.1.3.48,2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006883 313.0
BYD3_k127_8888052_3 Rhomboid family K19225 - 3.4.21.105 0.00000000000000000000000000000000000000000000000000000000000000000000000007921 267.0
BYD3_k127_8888052_4 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234 - 0.00000000000000007075 81.0
BYD3_k127_8888052_5 Putative prokaryotic signal transducing protein - - - 0.00000000000000008932 83.0
BYD3_k127_8888052_6 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000005527 68.0
BYD3_k127_8888052_7 Putative prokaryotic signal transducing protein - - - 0.0000000009855 60.0
BYD3_k127_8888795_0 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.0 1019.0
BYD3_k127_8888795_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000108 267.0
BYD3_k127_8888795_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000001051 151.0
BYD3_k127_8889287_0 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 6.988e-205 651.0
BYD3_k127_8889287_1 Ferric reductase like transmembrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 418.0
BYD3_k127_8889287_10 Haem-degrading - - - 0.000000003939 58.0
BYD3_k127_8889287_11 - - - - 0.00000001042 58.0
BYD3_k127_8889287_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000009023 240.0
BYD3_k127_8889287_3 SPTR Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000008107 212.0
BYD3_k127_8889287_4 - - - - 0.00000000000000000000000000000000000000000000000000000003647 206.0
BYD3_k127_8889287_5 Phosphoribulokinase / Uridine kinase family K00876 - 2.7.1.48 0.000000000000000000000000000000000000000000000000002952 189.0
BYD3_k127_8889287_6 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000004116 188.0
BYD3_k127_8889287_7 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000001934 122.0
BYD3_k127_8889287_8 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000297 115.0
BYD3_k127_8889287_9 Glycogen recognition site of AMP-activated protein kinase - - - 0.00000000000000001991 81.0
BYD3_k127_890267_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 546.0
BYD3_k127_890267_1 Chain length determinant protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 568.0
BYD3_k127_890267_2 PFAM NAD dependent epimerase dehydratase family K01784,K02473 - 5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 423.0
BYD3_k127_890267_3 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 299.0
BYD3_k127_890267_4 Protein of unknown function (DUF1624) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 294.0
BYD3_k127_890267_5 PFAM Transcription antitermination protein, NusG, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000001846 216.0
BYD3_k127_890267_6 COG1596 Periplasmic protein involved in polysaccharide export K01991 - - 0.000000000000000000000000000000000000000000000000005194 190.0
BYD3_k127_890267_7 Vault protein inter-alpha-trypsin domain - - - 0.0000000000000000000000000000000003239 134.0
BYD3_k127_890267_8 response to heat K03668,K09914 - - 0.000001044 56.0
BYD3_k127_8909641_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 1.139e-209 656.0
BYD3_k127_8909641_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 610.0
BYD3_k127_8909641_2 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005898 590.0
BYD3_k127_8909641_3 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006062 394.0
BYD3_k127_8909641_4 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008058 286.0
BYD3_k127_8909641_5 cytidine and deoxycytidylate deaminase K01489 - 3.5.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000002664 249.0
BYD3_k127_8909641_6 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000001658 231.0
BYD3_k127_8909641_7 Domain of unknown function (4846) - - - 0.00000000000000000000000000000000000000000000000000000000000006464 223.0
BYD3_k127_8909641_8 Export-related chaperone CsaA K06878 - - 0.00000000000000000000000000000000000000000003675 162.0
BYD3_k127_8909641_9 cell adhesion involved in biofilm formation - - - 0.000000000000000000000002654 112.0
BYD3_k127_8926144_0 histidine kinase-, DNA gyrase B - - - 4.271e-302 939.0
BYD3_k127_8926144_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 6.561e-268 837.0
BYD3_k127_8926144_10 Organic solvent ABC transporter ATP-binding protein K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 363.0
BYD3_k127_8926144_11 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 337.0
BYD3_k127_8926144_12 Ndr family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 314.0
BYD3_k127_8926144_13 PFAM Bacterial regulatory helix-turn-helix proteins, AraC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 309.0
BYD3_k127_8926144_14 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 306.0
BYD3_k127_8926144_15 Uroporphyrin-iii c tetrapyrrole (Corrin porphyrin) methyltransferase K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 300.0
BYD3_k127_8926144_16 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001952 276.0
BYD3_k127_8926144_17 Etoposide-induced protein 2.4 (EI24) K06203 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008061 268.0
BYD3_k127_8926144_18 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000001916 264.0
BYD3_k127_8926144_19 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002601 254.0
BYD3_k127_8926144_2 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 6.097e-231 718.0
BYD3_k127_8926144_20 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000003862 215.0
BYD3_k127_8926144_21 - - - - 0.0000000000000000000000000000000000000000000000006148 182.0
BYD3_k127_8926144_22 CsbD-like - - - 0.00000000000000001131 83.0
BYD3_k127_8926144_24 COG NOG29454 non supervised orthologous group - - - 0.0000225 54.0
BYD3_k127_8926144_3 Sodium proton antiporter K03316 - - 1.144e-206 655.0
BYD3_k127_8926144_4 Transporter K14445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 520.0
BYD3_k127_8926144_5 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 468.0
BYD3_k127_8926144_6 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 430.0
BYD3_k127_8926144_7 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 431.0
BYD3_k127_8926144_8 Belongs to the MlaE permease family K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 417.0
BYD3_k127_8926144_9 Acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 363.0
BYD3_k127_8976595_0 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006073 438.0
BYD3_k127_8976595_1 Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.0000000000000000000000000000000000000000000002308 172.0
BYD3_k127_8976595_2 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000006253 152.0
BYD3_k127_8976595_3 Thioredoxin-like - - - 0.0000000000000000000000000000000001474 138.0
BYD3_k127_9066504_0 COG2366 Protein related to penicillin acylase K01434 - 3.5.1.11 0.0 1047.0
BYD3_k127_9066504_1 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II K01835 - 5.4.2.2 6.392e-304 938.0
BYD3_k127_9066504_10 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005572 253.0
BYD3_k127_9066504_11 Belongs to the UPF0176 family K07146 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004629 250.0
BYD3_k127_9066504_12 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005435 255.0
BYD3_k127_9066504_13 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000001488 218.0
BYD3_k127_9066504_14 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000812 208.0
BYD3_k127_9066504_15 Acetyltransferase (GNAT) domain K03827 - - 0.0000000000000000000000000000000000000000000000000000455 192.0
BYD3_k127_9066504_16 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000004987 186.0
BYD3_k127_9066504_17 COG0659 Sulfate permease and related K03321 - - 0.0000000000000000000000000000000000000000000005587 171.0
BYD3_k127_9066504_18 domain, Protein - - - 0.000000000000000000000000000000000000002552 162.0
BYD3_k127_9066504_19 Cupin 2, conserved barrel domain protein K09988 - 5.3.1.15 0.0000000000000000000000000000005459 128.0
BYD3_k127_9066504_2 Pyrrolo-quinoline quinone K00117 - 1.1.5.2 2.477e-296 924.0
BYD3_k127_9066504_20 - - - - 0.0000000000000000000000000007893 116.0
BYD3_k127_9066504_21 DoxX - - - 0.000000000000000001604 92.0
BYD3_k127_9066504_22 domain protein - - - 0.000000003417 68.0
BYD3_k127_9066504_23 Doxx family - - - 0.000001483 60.0
BYD3_k127_9066504_3 CarboxypepD_reg-like domain - - - 3.571e-264 837.0
BYD3_k127_9066504_4 Oxidoreductase domain protein - - - 1.936e-247 765.0
BYD3_k127_9066504_5 Fe-S oxidoreductase - - - 3.263e-220 689.0
BYD3_k127_9066504_6 Peptidase family M48 K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 360.0
BYD3_k127_9066504_7 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 343.0
BYD3_k127_9066504_8 Predicted periplasmic lipoprotein (DUF2279) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 335.0
BYD3_k127_9066504_9 Domain of unknown function (DUF4386) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 309.0
BYD3_k127_9174_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 1.43e-300 934.0
BYD3_k127_9174_1 elongation factor G domain IV K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 332.0
BYD3_k127_9174_2 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000004431 219.0
BYD3_k127_9174_3 CYTH domain - - - 0.00000000000000000000000000000000000000000000000008797 184.0
BYD3_k127_9174_4 repeat protein - - - 0.00000000000000000000000000000000003764 140.0
BYD3_k127_9174_6 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000001132 60.0
BYD3_k127_926617_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1768.0
BYD3_k127_926617_1 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1334.0
BYD3_k127_926617_10 - - - - 0.0000000000000000014 96.0
BYD3_k127_926617_2 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 0.0 1049.0
BYD3_k127_926617_3 PFAM multicopper oxidase type 3 - - - 1.343e-230 733.0
BYD3_k127_926617_4 Belongs to the GarS family - - - 2.36e-219 690.0
BYD3_k127_926617_5 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 357.0
BYD3_k127_926617_6 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 319.0
BYD3_k127_926617_7 PFAM KWG Leptospira - - - 0.000000000000000000000000000000000000000000000000000000002275 206.0
BYD3_k127_926617_8 COGs COG1033 exporter of the RND superfamily protein K07003 - - 0.000000000000000000000000000000000000000000000000008599 186.0
BYD3_k127_926617_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000003717 146.0
BYD3_k127_930952_0 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 474.0
BYD3_k127_930952_1 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 399.0
BYD3_k127_930952_2 Protein of unknown function (DUF3109) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 307.0
BYD3_k127_930952_3 PFAM Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 292.0
BYD3_k127_930952_4 TIGRFAM gliding motility-associated lipoprotein GldD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002246 272.0
BYD3_k127_930952_5 Single-stranded DNA-binding protein K03111 - - 0.000000000000000000000000000000000000000000000000000000000000000000005272 236.0
BYD3_k127_930952_6 Tetratricopeptide repeat - - - 0.0000000001636 74.0
BYD3_k127_963228_0 Peptidase family M1 domain K01256 - 3.4.11.2 2.001e-299 946.0
BYD3_k127_963228_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 525.0
BYD3_k127_963228_10 TIGRFAM methylmalonate-semialdehyde dehydrogenase K00140,K22187 - 1.2.1.18,1.2.1.27 0.00000000000000000000000000000000000000000002555 163.0
BYD3_k127_963228_11 Protein involved in cellulose biosynthesis - - - 0.00000000000000000000000000000000001372 138.0
BYD3_k127_963228_12 PFAM Excinuclease ABC, C subunit K07461 - - 0.000000000000000000000005133 104.0
BYD3_k127_963228_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 501.0
BYD3_k127_963228_3 PFAM FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 453.0
BYD3_k127_963228_4 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 453.0
BYD3_k127_963228_5 PFAM Chalcone and stilbene synthases, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 437.0
BYD3_k127_963228_6 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 410.0
BYD3_k127_963228_7 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009515 356.0
BYD3_k127_963228_8 PFAM chalcone and stilbene - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002457 282.0
BYD3_k127_963228_9 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001524 244.0
BYD3_k127_991637_0 Peptidase family C25 - - - 0.0 1281.0
BYD3_k127_991637_1 COGs COG0491 Zn-dependent hydrolase including glyoxylase - - - 7.398e-241 752.0
BYD3_k127_991637_10 CRP FNR family transcriptional regulator K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001265 258.0
BYD3_k127_991637_11 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000001751 241.0
BYD3_k127_991637_12 Domain of unknown function (DUF4292) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001248 239.0
BYD3_k127_991637_13 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000000007863 221.0
BYD3_k127_991637_14 Rhodanese - - - 0.000000000000000000006928 96.0
BYD3_k127_991637_15 Rhodanese Homology Domain - - - 0.00000000000000000002215 93.0
BYD3_k127_991637_2 gliding motility-associated lipoprotein GldJ - - - 4.134e-225 709.0
BYD3_k127_991637_3 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 612.0
BYD3_k127_991637_4 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004565 597.0
BYD3_k127_991637_5 N-acetyl-alpha-D-glucosaminyl L-malate synthase K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 584.0
BYD3_k127_991637_6 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 501.0
BYD3_k127_991637_7 outer membrane porin, OprD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 385.0
BYD3_k127_991637_8 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 345.0
BYD3_k127_991637_9 Peptidase, M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006621 314.0
BYD3_k127_996444_0 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 546.0
BYD3_k127_996444_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 459.0
BYD3_k127_996444_2 cheY-homologous receiver domain - - - 0.00000000003473 63.0
BYD3_k127_99710_0 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 562.0
BYD3_k127_99710_1 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 447.0
BYD3_k127_99710_2 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000008403 215.0
BYD3_k127_99710_3 - - - - 0.0000000000000000000000000000000000000000000000000000000001432 208.0
BYD3_k127_99710_4 Ketosteroid isomerase-related protein - - - 0.000000000000000000000000000000000000000000000000000000002225 201.0
BYD3_k127_99710_5 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000001476 176.0
BYD3_k127_99710_6 - - - - 0.0000000000000000000000000000000000000000000005474 176.0
BYD3_k127_99710_7 - - - - 0.00000000000000000000000000000000001989 145.0
BYD3_k127_99710_9 Beta-lactamase - - - 0.0004362 43.0
BYD3_k127_998323_0 Pfam:SusD K21572 - - 8.835e-208 656.0
BYD3_k127_998323_1 PKD-like family - - - 1.105e-198 632.0
BYD3_k127_998323_2 Domain of unknown function (DUF5118) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 311.0
BYD3_k127_998323_3 Domain of unknown function (DUF4843) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 295.0
BYD3_k127_998323_4 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009414 248.0