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Overview

ID MAG00132
Name BYD3_bin.48
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family WYBJ01
Genus
Species
Assembly information
Completeness (%) 64.02
Contamination (%) 2.27
GC content (%) 68.0
N50 (bp) 13,951
Genome size (bp) 3,596,672

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3369

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1073861_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0017076,GO:0017111,GO:0019001,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046906,GO:0047727,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564 5.4.99.13 2.366e-299 925.0
BYD3_k127_1073861_1 KR domain - - - 0.0000000000000000000000000000000000000000000000000000001278 216.0
BYD3_k127_1114668_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1035.0
BYD3_k127_1114668_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 390.0
BYD3_k127_1114668_10 Chemotaxis sensory transducer K03406,K03776,K05874 - - 0.0000000000000000001761 96.0
BYD3_k127_1114668_2 Sigma factor PP2C-like phosphatases K20977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 355.0
BYD3_k127_1114668_3 Belongs to the argininosuccinate synthase family. Type 2 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000008302 241.0
BYD3_k127_1114668_4 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000299 240.0
BYD3_k127_1114668_5 regulator K03413 - - 0.0000000000000000000000000000000000000000000000000000000005578 207.0
BYD3_k127_1114668_6 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000002492 163.0
BYD3_k127_1114668_7 Sodium:sulfate symporter transmembrane region K03319 - - 0.000000000000000000000000000002452 136.0
BYD3_k127_1114668_8 STAS domain K20978 - - 0.00000000000000000000000000009167 118.0
BYD3_k127_1114668_9 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000007051 99.0
BYD3_k127_114791_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 510.0
BYD3_k127_114791_1 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 375.0
BYD3_k127_114791_2 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 334.0
BYD3_k127_114791_3 peptidase S1 and S6, chymotrypsin Hap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007234 271.0
BYD3_k127_114791_4 amidohydrolase - - - 0.000000008751 68.0
BYD3_k127_1169167_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007561 541.0
BYD3_k127_1169167_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 543.0
BYD3_k127_1169167_2 2'-deoxycytidine 5'-triphosphate deaminase (DCD) K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 438.0
BYD3_k127_1169167_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000001388 270.0
BYD3_k127_1169167_4 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000000000000000000004073 164.0
BYD3_k127_1169167_5 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000003038 104.0
BYD3_k127_1203842_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 1.153e-319 989.0
BYD3_k127_1203842_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 3.568e-240 764.0
BYD3_k127_1203842_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 464.0
BYD3_k127_1203842_3 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 407.0
BYD3_k127_1203842_4 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 356.0
BYD3_k127_1203842_5 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006207 262.0
BYD3_k127_1203842_6 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000001395 184.0
BYD3_k127_1203842_7 Domain of unknown function (DUF1330) - - - 0.000000000000000000000000001787 115.0
BYD3_k127_1203842_8 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000000000001994 105.0
BYD3_k127_121962_0 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 2.086e-249 777.0
BYD3_k127_121962_1 40-residue YVTN family beta-propeller repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 356.0
BYD3_k127_121962_2 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 331.0
BYD3_k127_121962_3 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001131 282.0
BYD3_k127_121962_4 VacJ family lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001029 280.0
BYD3_k127_121962_5 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000001966 243.0
BYD3_k127_1229672_0 DHH family K07462 - - 9.158e-203 645.0
BYD3_k127_1229672_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000003617 63.0
BYD3_k127_1247733_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006028 500.0
BYD3_k127_1247733_1 pyridoxamine 5-phosphate - - - 0.000000000000000000000000000005503 124.0
BYD3_k127_1254796_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11779,K11784 - 1.21.98.1,2.5.1.77 0.0 1034.0
BYD3_k127_1254796_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K16898 - 3.6.4.12 1.58e-200 652.0
BYD3_k127_1254796_10 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 325.0
BYD3_k127_1254796_11 N-acetylmuramoyl-L-alanine amidase K01447,K11066 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 297.0
BYD3_k127_1254796_12 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 295.0
BYD3_k127_1254796_13 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005071 278.0
BYD3_k127_1254796_14 NAD-dependent epimerase dehydratase K18981 - 1.1.1.203 0.0000000000000000000000000000000000000000000000000000000000000000000000000006629 269.0
BYD3_k127_1254796_15 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003439 264.0
BYD3_k127_1254796_16 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001297 262.0
BYD3_k127_1254796_17 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000008008 247.0
BYD3_k127_1254796_18 Domain of unknown function (DUF2520) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006992 248.0
BYD3_k127_1254796_19 Pfam:DUF989 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000749 240.0
BYD3_k127_1254796_2 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 534.0
BYD3_k127_1254796_20 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000002797 207.0
BYD3_k127_1254796_21 glycosyl transferase family - - - 0.0000000000000000000000000000000000000000000000000003064 198.0
BYD3_k127_1254796_22 MaoC like domain - - - 0.00000000000000000000000000000000000000000000000002189 196.0
BYD3_k127_1254796_23 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000001227 179.0
BYD3_k127_1254796_24 membrane - - - 0.00000000000000000000000000000000000000000000006439 179.0
BYD3_k127_1254796_25 Serine/threonine phosphatases, family 2C, catalytic domain K01090 - 3.1.3.16 0.000000000000000000000000000000000000000000002009 176.0
BYD3_k127_1254796_26 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000000000000000000000000000000000000000000005667 179.0
BYD3_k127_1254796_27 - - - - 0.000000000000000000000000000001137 123.0
BYD3_k127_1254796_28 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000002928 139.0
BYD3_k127_1254796_29 PFAM cobalamin (vitamin B12) biosynthesis CbiX protein K03795 - 4.99.1.3 0.00000000000000000000000000004034 128.0
BYD3_k127_1254796_3 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009121 447.0
BYD3_k127_1254796_30 Cupin domain K14673 - - 0.00000000000000000000000000008755 123.0
BYD3_k127_1254796_31 Putative prokaryotic signal transducing protein - - - 0.00000000000000000000000003401 113.0
BYD3_k127_1254796_32 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation - - - 0.00000000000003885 84.0
BYD3_k127_1254796_33 Belongs to the anti-sigma-factor antagonist family - - - 0.0000000000004664 78.0
BYD3_k127_1254796_4 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009336 415.0
BYD3_k127_1254796_5 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 428.0
BYD3_k127_1254796_6 Histone deacetylase domain K04768 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004594 384.0
BYD3_k127_1254796_7 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 378.0
BYD3_k127_1254796_8 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008738 385.0
BYD3_k127_1254796_9 pdz dhr glgf - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 356.0
BYD3_k127_1327470_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.996e-211 672.0
BYD3_k127_1327470_1 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005147 601.0
BYD3_k127_1327470_2 ZIP Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004343 330.0
BYD3_k127_1327470_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 295.0
BYD3_k127_1327470_4 Polyhydroxyalkanoate synthesis repressor PhaR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005529 250.0
BYD3_k127_1327470_5 Protein of unknown function (DUF1232) - - - 0.00000000000000000000000000001788 119.0
BYD3_k127_133017_0 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 4.889e-261 830.0
BYD3_k127_133017_1 High confidence in function and specificity - - - 1.348e-210 674.0
BYD3_k127_133017_10 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000000006746 204.0
BYD3_k127_133017_11 PRC-barrel domain - - - 0.00000000000000000000000000000000000000000000000003874 185.0
BYD3_k127_133017_12 OmpA-like transmembrane domain - - - 0.0000000000000000000000000000000002277 139.0
BYD3_k127_133017_13 periplasmic or secreted lipoprotein - - - 0.00000000000000000000000002425 123.0
BYD3_k127_133017_14 Histidine kinase - - - 0.0000000000000000002798 96.0
BYD3_k127_133017_15 UPF0391 membrane protein - - - 0.00000000000000041 83.0
BYD3_k127_133017_16 response to toxic substance - - - 0.0000001387 57.0
BYD3_k127_133017_2 sorbosone dehydrogenase - - - 4.178e-198 627.0
BYD3_k127_133017_3 Domain of unknown function (DUF3459) K01236 - 3.2.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 609.0
BYD3_k127_133017_4 Diguanylate cyclase K13590 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 584.0
BYD3_k127_133017_5 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004282 313.0
BYD3_k127_133017_6 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 285.0
BYD3_k127_133017_7 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006975 278.0
BYD3_k127_133017_8 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004904 260.0
BYD3_k127_133017_9 Protein of unknown function (DUF421) - - - 0.000000000000000000000000000000000000000000000000000000000005447 211.0
BYD3_k127_1332374_0 CoA-transferase family III K07544 - 2.8.3.15 0.0 1122.0
BYD3_k127_1332374_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000008301 218.0
BYD3_k127_1332374_2 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000003229 123.0
BYD3_k127_1332374_3 toxin-antitoxin pair type II binding - - - 0.000000000000000007874 86.0
BYD3_k127_1332374_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.000000000000000496 78.0
BYD3_k127_1354436_0 PFAM RNA-binding protein AU-1 Ribonuclease E G K08301 - - 1.071e-233 734.0
BYD3_k127_1354436_1 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 626.0
BYD3_k127_1354436_2 Dynamin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 515.0
BYD3_k127_1354436_3 protein deglycase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000003003 250.0
BYD3_k127_1354436_4 Glyoxalase-like domain - - - 0.000000000000000000000002138 113.0
BYD3_k127_1354436_5 Maf-like protein K06287 - - 0.00000000000000000004538 91.0
BYD3_k127_1354436_6 Belongs to the UPF0235 family K09131 - - 0.00004461 47.0
BYD3_k127_1356642_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 5.135e-224 704.0
BYD3_k127_1356642_1 2 iron, 2 sulfur cluster binding K00266,K00528,K02823 - 1.18.1.2,1.19.1.1,1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008496 450.0
BYD3_k127_1356642_2 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases K00174 - 1.2.7.11,1.2.7.3 0.00002795 50.0
BYD3_k127_1374857_0 COG0277 FAD FMN-containing dehydrogenases - - - 0.0 1134.0
BYD3_k127_1374857_1 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 307.0
BYD3_k127_1374857_2 response to heat K07090 - - 0.000000000000000000001385 100.0
BYD3_k127_1387243_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 1.111e-272 876.0
BYD3_k127_1387243_1 Amidohydrolase K07045 - - 4.752e-210 663.0
BYD3_k127_1387243_10 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 329.0
BYD3_k127_1387243_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 317.0
BYD3_k127_1387243_12 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001801 287.0
BYD3_k127_1387243_13 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002701 280.0
BYD3_k127_1387243_14 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000001203 211.0
BYD3_k127_1387243_15 cytochrome c K17223 - - 0.0000000000000000000000000000000000003434 145.0
BYD3_k127_1387243_16 PFAM Transglycosylase-associated protein - - - 0.0000000000000000000000000002161 117.0
BYD3_k127_1387243_17 protein conserved in bacteria - - - 0.0000000000000000000008812 106.0
BYD3_k127_1387243_18 protein domain associated with - - - 0.000000000000000000004836 101.0
BYD3_k127_1387243_19 - - - - 0.00002259 49.0
BYD3_k127_1387243_2 Receptor family ligand binding region K01999 - - 1.947e-203 639.0
BYD3_k127_1387243_20 - - - - 0.0003578 51.0
BYD3_k127_1387243_3 PFAM amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005258 539.0
BYD3_k127_1387243_4 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008008 541.0
BYD3_k127_1387243_5 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007666 447.0
BYD3_k127_1387243_6 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 413.0
BYD3_k127_1387243_7 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008963 398.0
BYD3_k127_1387243_8 Protein of unknown function (DUF808) K09781 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 405.0
BYD3_k127_1387243_9 PFAM Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 367.0
BYD3_k127_1399229_0 2-methylcitrate dehydratase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 446.0
BYD3_k127_1399229_1 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009796 382.0
BYD3_k127_1399229_10 - - - - 0.000000000000000000000000007508 122.0
BYD3_k127_1399229_11 STAS domain - - - 0.00000000000000000000001077 110.0
BYD3_k127_1399229_12 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.0000000000000000000002755 99.0
BYD3_k127_1399229_13 - - - - 0.0000000000000000000003573 104.0
BYD3_k127_1399229_14 Pentapeptide repeats (8 copies) - - - 0.00000002005 68.0
BYD3_k127_1399229_15 NACHT domain - - - 0.00000003478 68.0
BYD3_k127_1399229_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 321.0
BYD3_k127_1399229_3 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 298.0
BYD3_k127_1399229_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002548 256.0
BYD3_k127_1399229_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000001757 263.0
BYD3_k127_1399229_6 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000001826 241.0
BYD3_k127_1399229_7 Alpha beta hydrolase K07002 - - 0.000000000000000000000000000000000000000000002456 175.0
BYD3_k127_1399229_8 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000000000000000000001314 123.0
BYD3_k127_1399229_9 tRNA wobble adenosine to inosine editing K01297,K01485,K01487,K01563,K04075,K11991 GO:0002097,GO:0002100,GO:0003674,GO:0003824,GO:0004000,GO:0005488,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008251,GO:0008270,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0052717,GO:0071704,GO:0090304,GO:1901360 3.4.17.13,3.5.4.1,3.5.4.3,3.5.4.33,3.8.1.5,6.3.4.19 0.00000000000000000000000000007302 123.0
BYD3_k127_1444414_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 2.501e-228 721.0
BYD3_k127_1444414_1 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008729 536.0
BYD3_k127_1444414_10 PFAM Response regulator receiver domain, Transcriptional regulatory protein, C terminal K02483,K07666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002657 283.0
BYD3_k127_1444414_11 Iron-containing redox enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003915 288.0
BYD3_k127_1444414_12 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001939 274.0
BYD3_k127_1444414_13 Dienelactone hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003352 273.0
BYD3_k127_1444414_14 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004677 243.0
BYD3_k127_1444414_15 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.00000000000000000000000000000000000000000000000000000000000000000007193 248.0
BYD3_k127_1444414_16 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000007778 250.0
BYD3_k127_1444414_17 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000001958 231.0
BYD3_k127_1444414_18 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000002956 218.0
BYD3_k127_1444414_19 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000000000000000000000000005039 187.0
BYD3_k127_1444414_2 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005164 518.0
BYD3_k127_1444414_20 Thermostable hemolysin - - - 0.000000000000000000000000000000000000000000000001025 182.0
BYD3_k127_1444414_21 CBS domain containing protein - - - 0.0000000000000000000000000000000000000000004203 162.0
BYD3_k127_1444414_22 Mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000000000000002592 160.0
BYD3_k127_1444414_23 - - - - 0.00000000000000000000000004965 117.0
BYD3_k127_1444414_24 PFAM Restriction endonuclease K07448 - - 0.00000000000009916 79.0
BYD3_k127_1444414_25 OsmC-like protein - - - 0.0005671 49.0
BYD3_k127_1444414_3 ABC-type dipeptide oligopeptide nickel transport system, permease component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 464.0
BYD3_k127_1444414_4 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 428.0
BYD3_k127_1444414_5 PFAM extracellular solute-binding protein, family 5 K02035,K12368 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 424.0
BYD3_k127_1444414_6 Amp-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 412.0
BYD3_k127_1444414_7 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 374.0
BYD3_k127_1444414_8 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 372.0
BYD3_k127_1444414_9 Two-component sensor kinase N-terminal K02484,K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 355.0
BYD3_k127_1468776_0 Twin-arginine translocation pathway signal sequence - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 456.0
BYD3_k127_1468776_1 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007892 455.0
BYD3_k127_1468776_10 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000002588 123.0
BYD3_k127_1468776_11 PFAM Cyclic nucleotide-binding - - - 0.00000000000000008424 86.0
BYD3_k127_1468776_12 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000001014 55.0
BYD3_k127_1468776_2 Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 391.0
BYD3_k127_1468776_3 Histidine kinase K07638 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 370.0
BYD3_k127_1468776_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07659 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 361.0
BYD3_k127_1468776_5 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003236 337.0
BYD3_k127_1468776_6 - K07039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002762 289.0
BYD3_k127_1468776_7 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008394 268.0
BYD3_k127_1468776_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000003997 236.0
BYD3_k127_1468776_9 C-terminal domain of histone - - - 0.0000000000000000000000000000000000000000000000000000000000000141 220.0
BYD3_k127_147297_0 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 432.0
BYD3_k127_147297_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 303.0
BYD3_k127_147297_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000114 249.0
BYD3_k127_147297_3 Protein of unknown function (DUF2390) - - - 0.00000000000000000000001329 108.0
BYD3_k127_147297_4 III protein - - - 0.000000000000000002046 87.0
BYD3_k127_147297_5 Anti-sigma F factor - - - 0.0000000002195 64.0
BYD3_k127_1557010_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 5.02e-298 929.0
BYD3_k127_1557010_1 Neisseria PilC beta-propeller domain K02674 - - 1.446e-225 736.0
BYD3_k127_1557010_10 type 4 fimbrial biogenesis K02672 - - 0.00000000000000000000000000000000000000000000000000000000000000658 229.0
BYD3_k127_1557010_11 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.00000000000000000000000000000000000000000000000000003184 197.0
BYD3_k127_1557010_12 Alpha/beta hydrolase of unknown function (DUF1100) - - - 0.0000000000000000000000000000000000000000007361 173.0
BYD3_k127_1557010_13 Prokaryotic N-terminal methylation motif K02671 - - 0.000000000000000000000000000000000000005268 155.0
BYD3_k127_1557010_14 HDOD domain - - - 0.0000000000000000000000000000000000001201 153.0
BYD3_k127_1557010_15 Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02403 - - 0.0000000000000000000000000000000001109 137.0
BYD3_k127_1557010_16 Bacterial extracellular solute-binding protein K22003 - 5.3.3.7 0.0000000000000000000000000000000002523 143.0
BYD3_k127_1557010_17 type 4 fimbrial pilin related transmembrane protein K08084 - - 0.0000000000000000008762 98.0
BYD3_k127_1557010_18 Belongs to the ParA family K04562 - - 0.00000000003278 70.0
BYD3_k127_1557010_19 Cupin 2, conserved barrel domain protein - - - 0.0000004166 57.0
BYD3_k127_1557010_2 RESPONSE REGULATOR receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007304 575.0
BYD3_k127_1557010_20 Pilus assembly protein PilX - - - 0.000008155 58.0
BYD3_k127_1557010_3 MotA/TolQ/ExbB proton channel family K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007862 471.0
BYD3_k127_1557010_4 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 463.0
BYD3_k127_1557010_5 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 422.0
BYD3_k127_1557010_6 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 422.0
BYD3_k127_1557010_7 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 394.0
BYD3_k127_1557010_8 PFAM GTP-binding signal recognition particle SRP54 G- domain K02404 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 384.0
BYD3_k127_1557010_9 Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006832 264.0
BYD3_k127_1557740_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 7.7e-322 1000.0
BYD3_k127_1557740_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 1.247e-320 1005.0
BYD3_k127_1557740_10 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 368.0
BYD3_k127_1557740_11 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 334.0
BYD3_k127_1557740_12 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772,K03815 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 328.0
BYD3_k127_1557740_13 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002713 278.0
BYD3_k127_1557740_14 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001551 259.0
BYD3_k127_1557740_15 Belongs to the GcvT family K06980 - - 0.00000000000000000000000000000000000000000000000000000000000000000002014 246.0
BYD3_k127_1557740_16 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000001359 224.0
BYD3_k127_1557740_17 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000000000000000000000000000000000005327 213.0
BYD3_k127_1557740_18 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000105 216.0
BYD3_k127_1557740_19 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000001562 206.0
BYD3_k127_1557740_2 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 527.0
BYD3_k127_1557740_20 Belongs to the skp family K06142 - - 0.0000000000000000000000000000000000000000000007813 176.0
BYD3_k127_1557740_21 - K19168 - - 0.000002547 58.0
BYD3_k127_1557740_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 497.0
BYD3_k127_1557740_4 Methionine aminopeptidase K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 437.0
BYD3_k127_1557740_5 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 425.0
BYD3_k127_1557740_6 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 385.0
BYD3_k127_1557740_7 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 385.0
BYD3_k127_1557740_8 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 368.0
BYD3_k127_1557740_9 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005488 368.0
BYD3_k127_1577579_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.167e-266 831.0
BYD3_k127_1577579_1 Belongs to the LDH2 MDH2 oxidoreductase family K13609,K16844 - 1.1.1.338,1.5.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 361.0
BYD3_k127_1577579_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001387 300.0
BYD3_k127_1577579_3 Flagellar regulatory protein FleQ - - - 0.00000000000000000000000000000000000000000000000000000000000000003397 229.0
BYD3_k127_1577579_4 short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000004029 174.0
BYD3_k127_1604203_0 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 534.0
BYD3_k127_1604203_1 Iron-containing alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 400.0
BYD3_k127_1604203_10 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008451 248.0
BYD3_k127_1604203_11 Amidohydrolase - - - 0.000000000000000000000000000000000000005482 158.0
BYD3_k127_1604203_12 Oxidoreductase - - - 0.000000000000000000000000000000000000006777 167.0
BYD3_k127_1604203_13 Universal stress protein - - - 0.0000000000000000000000000000000002173 136.0
BYD3_k127_1604203_14 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.000000000000000000000000007873 116.0
BYD3_k127_1604203_16 Protein of unknown function (DUF2934) - - - 0.000002417 53.0
BYD3_k127_1604203_2 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 346.0
BYD3_k127_1604203_3 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 325.0
BYD3_k127_1604203_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000683 286.0
BYD3_k127_1604203_5 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002864 283.0
BYD3_k127_1604203_6 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000102 290.0
BYD3_k127_1604203_7 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000366 281.0
BYD3_k127_1604203_8 Catalyzes the conversion of maleate to fumarate K01799,K06033 - 4.1.1.76,5.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000002088 257.0
BYD3_k127_1604203_9 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001306 259.0
BYD3_k127_1633520_0 Belongs to the IlvD Edd family K01687,K22186 - 4.2.1.82,4.2.1.9 8.115e-285 887.0
BYD3_k127_1633520_1 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 482.0
BYD3_k127_1633520_2 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family K00219 - 1.3.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007772 377.0
BYD3_k127_1633520_3 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000173 206.0
BYD3_k127_1633520_4 Bacterial extracellular solute-binding protein - - - 0.00000000000195 81.0
BYD3_k127_1642992_0 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008047 542.0
BYD3_k127_1642992_1 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007018 427.0
BYD3_k127_1642992_2 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 416.0
BYD3_k127_1642992_3 Belongs to the HpcH HpaI aldolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 392.0
BYD3_k127_1642992_4 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 400.0
BYD3_k127_1642992_5 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 375.0
BYD3_k127_1642992_6 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000002362 260.0
BYD3_k127_1642992_7 SOS response associated peptidase (SRAP) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005864 250.0
BYD3_k127_1642992_8 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000005131 178.0
BYD3_k127_1642992_9 - - - - 0.000000000000000000000000000086 122.0
BYD3_k127_1647147_0 Fumarate reductase flavoprotein C-term K00239,K00244 - 1.3.5.1,1.3.5.4 2.648e-275 856.0
BYD3_k127_1647147_1 Tartrate K01677 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 467.0
BYD3_k127_1647147_2 PFAM sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 378.0
BYD3_k127_1647147_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009208 338.0
BYD3_k127_1647147_4 )-tartrate dehydratase K03780 GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896 4.2.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 308.0
BYD3_k127_1647147_5 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 284.0
BYD3_k127_1647147_6 succinate dehydrogenase K00247 - - 0.0000000000000000000000000000000000008272 148.0
BYD3_k127_1647147_7 Succinate dehydrogenase/Fumarate reductase transmembrane subunit - - - 0.000000000000000000000000000008832 123.0
BYD3_k127_1647147_8 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) - - - 0.000000001835 58.0
BYD3_k127_1655858_0 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003429 280.0
BYD3_k127_1655858_1 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004442 284.0
BYD3_k127_1655858_2 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000717 236.0
BYD3_k127_1655858_3 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000002843 227.0
BYD3_k127_1656589_0 Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006713 413.0
BYD3_k127_1656589_1 thiamine-containing compound biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002553 287.0
BYD3_k127_1656589_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003172 265.0
BYD3_k127_1656589_3 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000001871 210.0
BYD3_k127_1659698_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0 2976.0
BYD3_k127_1659698_1 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 377.0
BYD3_k127_1659698_2 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 329.0
BYD3_k127_1659698_3 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000002758 239.0
BYD3_k127_1659698_4 ribonuclease BN K07058 - - 0.0000000000000000000000000000000000000000000000000171 191.0
BYD3_k127_1659698_5 PFAM AsmA family protein K07289,K07290 - - 0.000000000000000000002763 97.0
BYD3_k127_1659698_6 Protein of unknown function (DUF3309) - - - 0.0000000000000006862 79.0
BYD3_k127_170242_0 COG1042 Acyl-CoA synthetase (NDP forming) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 496.0
BYD3_k127_170242_1 Protein of unknown function (DUF1631) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 347.0
BYD3_k127_170242_2 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000183 222.0
BYD3_k127_170242_3 response to cobalt ion - - - 0.0000000000000000000000000000000000000000000003538 174.0
BYD3_k127_170672_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 590.0
BYD3_k127_170672_1 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006296 552.0
BYD3_k127_170672_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 528.0
BYD3_k127_170672_3 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 497.0
BYD3_k127_170672_4 Mur ligase family, catalytic domain K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009045 464.0
BYD3_k127_1733479_0 E1-E2 ATPase K17686 - 3.6.3.54 1.794e-239 774.0
BYD3_k127_1733479_1 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 600.0
BYD3_k127_1733479_2 Member of a two-component regulatory system K07644 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 349.0
BYD3_k127_1733479_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 336.0
BYD3_k127_1733479_4 Psort location CytoplasmicMembrane, score K01533 - 3.6.3.4 0.0000000000000000000000000000000000000000000000000000000006782 209.0
BYD3_k127_1733479_5 - - - - 0.000000000000000005895 87.0
BYD3_k127_1733479_6 cytochrome oxidase maturation protein cbb3-type - - - 0.0000000000000005378 79.0
BYD3_k127_1733479_7 helix_turn_helix, mercury resistance K08365 - - 0.0002932 45.0
BYD3_k127_1737406_0 - - - - 3.953e-264 832.0
BYD3_k127_1737406_1 - - - - 3.486e-257 812.0
BYD3_k127_1737406_10 Major Facilitator Superfamily - - - 0.000000000724 63.0
BYD3_k127_1737406_2 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 460.0
BYD3_k127_1737406_3 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007933 432.0
BYD3_k127_1737406_4 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 316.0
BYD3_k127_1737406_5 Enoyl-CoA hydratase/isomerase K01661,K07536 - 4.1.3.36 0.0000000000000000000000000000000000000000000000000000000000000005383 231.0
BYD3_k127_1737406_6 prepilin-type N-terminal cleavage methylation K02456 - - 0.0000000000000000000000000000000000000000000000000000000009224 209.0
BYD3_k127_1737406_7 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000000000000118 161.0
BYD3_k127_1737406_8 Type II secretory pathway, pseudopilin - - - 0.0000000000000000000000000000000000000001461 158.0
BYD3_k127_1737406_9 methylmalonyl-CoA epimerase K05606 - 5.1.99.1 0.00000000000000000000000000000000000004608 147.0
BYD3_k127_1746512_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 2.356e-286 905.0
BYD3_k127_1746512_1 Protein of unknown function (DUF521) K09123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009774 522.0
BYD3_k127_1746512_2 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006025 317.0
BYD3_k127_1746512_3 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006282,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000001768 267.0
BYD3_k127_1746512_4 Protein of unknown function DUF126 K09128 - - 0.00000000000000000000000000000000000000000000000000009691 204.0
BYD3_k127_1746512_5 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.00000000000000000000000000000000000000000000000002638 186.0
BYD3_k127_1746512_6 NUDIX hydrolase - - - 0.00000000000000000000000000002692 121.0
BYD3_k127_1746512_7 CAAX protease self-immunity K01266,K07052 - 3.4.11.19 0.00000000000000000000001293 112.0
BYD3_k127_1746512_8 - - - - 0.0000000000000001275 88.0
BYD3_k127_1790343_0 Amidohydrolase family - - - 9.604e-255 797.0
BYD3_k127_1790343_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 608.0
BYD3_k127_1790343_10 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001437 265.0
BYD3_k127_1790343_11 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001982 261.0
BYD3_k127_1790343_12 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000001212 245.0
BYD3_k127_1790343_13 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000101 234.0
BYD3_k127_1790343_14 Eukaryotic integral membrane protein (DUF1751) - - - 0.000000000000000000000000000000000000000000000000000000000000000001297 234.0
BYD3_k127_1790343_15 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000894 205.0
BYD3_k127_1790343_16 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000006835 195.0
BYD3_k127_1790343_17 - - - - 0.00000000000000000000000000000000000000000002031 182.0
BYD3_k127_1790343_18 - - - - 0.0000000000000000000000000000000000000000003684 167.0
BYD3_k127_1790343_19 Amidohydrolase - - - 0.000000000000000000000000000000000000000001402 178.0
BYD3_k127_1790343_2 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 445.0
BYD3_k127_1790343_20 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000005926 154.0
BYD3_k127_1790343_21 Nucleotide pyrophosphohydrolase - - - 0.0000000000000000000000000000000003107 152.0
BYD3_k127_1790343_22 Phosphoenolpyruvate phosphomutase K03417 - 4.1.3.30 0.000000000000000000000000007029 123.0
BYD3_k127_1790343_23 peptidyl-tyrosine sulfation - - - 0.0000000000005748 80.0
BYD3_k127_1790343_24 nucleoside 2-deoxyribosyltransferase - - - 0.00002249 55.0
BYD3_k127_1790343_3 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 442.0
BYD3_k127_1790343_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 408.0
BYD3_k127_1790343_5 Integral membrane protein TerC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 347.0
BYD3_k127_1790343_6 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 298.0
BYD3_k127_1790343_7 short-chain dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008916 289.0
BYD3_k127_1790343_8 Short-chain dehydrogenase reductase sdr - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004707 286.0
BYD3_k127_1790343_9 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01856,K01860,K19802 - 5.1.1.20,5.5.1.1,5.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009223 280.0
BYD3_k127_1801668_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 7.163e-196 619.0
BYD3_k127_1801668_1 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 318.0
BYD3_k127_1801668_2 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000005799 242.0
BYD3_k127_1801668_3 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000001511 214.0
BYD3_k127_1840365_0 MMPL family - - - 9.577e-238 747.0
BYD3_k127_1840365_1 Cys/Met metabolism PLP-dependent enzyme K01739,K01758,K01760,K01761 - 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 445.0
BYD3_k127_1840365_2 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003147 284.0
BYD3_k127_1840365_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001322 286.0
BYD3_k127_1840365_4 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006835 283.0
BYD3_k127_1840365_5 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000000003923 235.0
BYD3_k127_1890331_0 Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 556.0
BYD3_k127_1890331_1 - - - - 0.000000000000000000000000000000000000000000000000002581 192.0
BYD3_k127_1890331_2 Domain of unknown function (DUF1993) K09983 - - 0.0000000000000000000000000000000000000000008914 181.0
BYD3_k127_1890331_3 - - - - 0.00000000000000000000000000000000003598 136.0
BYD3_k127_1890331_4 ABC transporter substrate-binding protein - - - 0.000000000000000000000000000001245 126.0
BYD3_k127_1915783_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 442.0
BYD3_k127_1915783_1 Acyl-CoA dehydrogenase, C-terminal domain K16047 - 1.14.14.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 415.0
BYD3_k127_1915783_2 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006265 407.0
BYD3_k127_1915783_3 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001202 280.0
BYD3_k127_1915783_4 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000002192 203.0
BYD3_k127_1915783_5 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000004406 191.0
BYD3_k127_1915783_6 COG0006 Xaa-Pro aminopeptidase - - - 0.000000000000000000000000000000000000006925 150.0
BYD3_k127_1915783_7 FAD binding domain - - - 0.000000000000000000001692 99.0
BYD3_k127_1937288_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 608.0
BYD3_k127_1937288_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009791 466.0
BYD3_k127_1937288_10 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000005288 205.0
BYD3_k127_1937288_11 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000482 66.0
BYD3_k127_1937288_12 Tripartite tricarboxylate transporter TctB family - - - 0.0000002685 59.0
BYD3_k127_1937288_2 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007541 437.0
BYD3_k127_1937288_3 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 404.0
BYD3_k127_1937288_4 Tripartite tricarboxylate transporter TctA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 418.0
BYD3_k127_1937288_5 COG1335 Amidases related to nicotinamidase - GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005454 388.0
BYD3_k127_1937288_6 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 320.0
BYD3_k127_1937288_7 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 310.0
BYD3_k127_1937288_8 response regulator receiver K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001464 284.0
BYD3_k127_1937288_9 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000002889 215.0
BYD3_k127_193746_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 3.302e-293 919.0
BYD3_k127_193746_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 548.0
BYD3_k127_193746_10 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000002367 117.0
BYD3_k127_193746_11 peptidase S9 - - - 0.00000000000000000000000003893 111.0
BYD3_k127_193746_12 COG1247 Sortase and related acyltransferases - - - 0.000000000003296 73.0
BYD3_k127_193746_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007285 426.0
BYD3_k127_193746_3 Tyrosine recombinase xerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000994 386.0
BYD3_k127_193746_4 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004873 280.0
BYD3_k127_193746_5 Taurine catabolism dioxygenase TauD, TfdA family K03119,K22303 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000000000000000000001042 261.0
BYD3_k127_193746_6 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000004036 229.0
BYD3_k127_193746_7 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.0000000000000000000000000000000000000000000001436 179.0
BYD3_k127_193746_8 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000001137 167.0
BYD3_k127_193746_9 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000008123 143.0
BYD3_k127_1952002_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 548.0
BYD3_k127_1952002_1 FMN-dependent dehydrogenase K00101,K15054 - 1.1.2.3,1.1.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006664 446.0
BYD3_k127_1952002_2 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005535 278.0
BYD3_k127_1952002_3 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000146 259.0
BYD3_k127_1952002_4 N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001594 250.0
BYD3_k127_1952002_5 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000001459 237.0
BYD3_k127_1952002_6 It is involved in the biological process described with transmembrane transport - GO:0005575,GO:0016020,GO:0016021,GO:0031224,GO:0044425 - 0.0002096 46.0
BYD3_k127_1968001_0 aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 357.0
BYD3_k127_1968001_1 Transglutaminase/protease-like homologues K22452 - 2.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 310.0
BYD3_k127_1968001_2 Peptidoglycan-binding domain 1 protein K03194,K07273,K08307,K08309,K12089 - - 0.0000000000000000000000000000000000000000000000000000000000000000009959 237.0
BYD3_k127_1968001_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000003131 166.0
BYD3_k127_1968001_4 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000001036 109.0
BYD3_k127_2018836_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07811,K08351 - 1.7.2.3 1.041e-305 953.0
BYD3_k127_2018836_1 FAD binding domain - - - 1.485e-218 692.0
BYD3_k127_2018836_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005102 273.0
BYD3_k127_2018836_3 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000007229 128.0
BYD3_k127_2028870_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 2.278e-254 801.0
BYD3_k127_2028870_1 COG1042 Acyl-CoA synthetase (NDP forming) - - - 6.273e-205 660.0
BYD3_k127_2028870_10 transporter solute receptor, DctP family - - - 0.0000000000000000000000000000000000001534 153.0
BYD3_k127_2028870_11 to SP P45857 PID 881606 PID 1303933 GB AL009126 percent identity 42.55 - - - 0.00000000000000000000000000002104 131.0
BYD3_k127_2028870_2 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 558.0
BYD3_k127_2028870_3 Aminotransferase class-III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 489.0
BYD3_k127_2028870_4 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 478.0
BYD3_k127_2028870_5 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 402.0
BYD3_k127_2028870_6 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 340.0
BYD3_k127_2028870_7 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009115 314.0
BYD3_k127_2028870_8 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007459 277.0
BYD3_k127_2028870_9 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000006254 194.0
BYD3_k127_2029402_0 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005477 621.0
BYD3_k127_2029402_1 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 534.0
BYD3_k127_2029402_10 PFAM AMP-dependent synthetase and ligase - - - 0.00000000000000000001416 107.0
BYD3_k127_2029402_2 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 373.0
BYD3_k127_2029402_3 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 373.0
BYD3_k127_2029402_4 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 340.0
BYD3_k127_2029402_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 320.0
BYD3_k127_2029402_6 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002334 286.0
BYD3_k127_2029402_7 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002586 268.0
BYD3_k127_2029402_8 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001208 275.0
BYD3_k127_2029402_9 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000003773 225.0
BYD3_k127_2032025_0 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 1.078e-205 648.0
BYD3_k127_2032025_1 Metallopeptidase family M24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 610.0
BYD3_k127_2032025_2 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit K00162,K21417 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 531.0
BYD3_k127_2032025_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008484 379.0
BYD3_k127_2032025_4 e3 binding domain K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 362.0
BYD3_k127_2032025_5 PFAM dehydrogenase, E1 component K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 320.0
BYD3_k127_2032025_6 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000001099 241.0
BYD3_k127_2035938_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K02182 - 6.2.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005321 533.0
BYD3_k127_2035938_1 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 421.0
BYD3_k127_2035938_2 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 409.0
BYD3_k127_2035938_3 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 312.0
BYD3_k127_2035938_4 Belongs to the enoyl-CoA hydratase isomerase family K01692,K11264 - 4.1.1.41,4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 314.0
BYD3_k127_2035938_5 CAAX protease self-immunity - - - 0.00000000000000000000000000000000000000000000000000000000000001314 222.0
BYD3_k127_2048236_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1285.0
BYD3_k127_2048236_1 Orn/Lys/Arg decarboxylase, C-terminal domain K01583 - 4.1.1.19 0.0 1110.0
BYD3_k127_2048236_10 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000000000000001878 241.0
BYD3_k127_2048236_11 PFAM 20S proteasome, A and B subunits - - - 0.000000000000000000000000000000000000000000000000000000000006164 216.0
BYD3_k127_2048236_12 Ferric uptake regulator family K09826 - - 0.0000000000000000000000000000000000000000000002995 173.0
BYD3_k127_2048236_13 gag-polyprotein putative aspartyl protease K06985 - - 0.0000000000000000000000000000000000000000000015 175.0
BYD3_k127_2048236_14 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000724 159.0
BYD3_k127_2048236_15 Prokaryotic N-terminal methylation motif K02655 - - 0.0000000000000000000000000000001366 129.0
BYD3_k127_2048236_16 Protein of unknown function (DUF3579) - - - 0.00000000000000000000000003067 111.0
BYD3_k127_2048236_17 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000001912 100.0
BYD3_k127_2048236_18 Catalyzes the Claisen rearrangement of chorismate to prephenate K04093 GO:0003674,GO:0003824,GO:0004106,GO:0005575,GO:0005576,GO:0006082,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044281,GO:0046417,GO:0071704 5.4.99.5 0.0001419 54.0
BYD3_k127_2048236_19 - - - - 0.0007844 42.0
BYD3_k127_2048236_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 3.18e-215 692.0
BYD3_k127_2048236_3 Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 548.0
BYD3_k127_2048236_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 477.0
BYD3_k127_2048236_5 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 469.0
BYD3_k127_2048236_6 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007924 457.0
BYD3_k127_2048236_7 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 404.0
BYD3_k127_2048236_8 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 310.0
BYD3_k127_2048236_9 Glutamine amidotransferase class-I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 303.0
BYD3_k127_2070403_0 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000973 349.0
BYD3_k127_2070403_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007549 308.0
BYD3_k127_2070403_2 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001016 286.0
BYD3_k127_2070403_3 Cro/C1-type HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000005222 207.0
BYD3_k127_2070403_4 pathogenesis - - - 0.000000000000000000000000000000000000000000002108 179.0
BYD3_k127_2070403_5 Belongs to the ParA family K04562 - - 0.000002501 53.0
BYD3_k127_2142217_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08351 - - 1.042e-317 989.0
BYD3_k127_2142217_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 9.304e-315 1002.0
BYD3_k127_2142217_10 Aminotransferase K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 514.0
BYD3_k127_2142217_11 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 505.0
BYD3_k127_2142217_12 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 471.0
BYD3_k127_2142217_13 Cysteine-rich domain K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 367.0
BYD3_k127_2142217_14 Beta-eliminating lyase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 375.0
BYD3_k127_2142217_15 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015,K00090,K18916 - 1.1.1.215,1.1.1.26,1.1.1.79,1.1.1.81,1.20.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 366.0
BYD3_k127_2142217_16 KR domain K00076,K08081 - 1.1.1.159,1.1.1.206 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003531 340.0
BYD3_k127_2142217_17 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008626 330.0
BYD3_k127_2142217_18 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 316.0
BYD3_k127_2142217_19 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005558 319.0
BYD3_k127_2142217_2 Belongs to the UbiD family K03182 - 4.1.1.98 6.114e-252 790.0
BYD3_k127_2142217_20 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005278 309.0
BYD3_k127_2142217_21 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008781 303.0
BYD3_k127_2142217_22 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 320.0
BYD3_k127_2142217_23 LUD domain K00782 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009224 258.0
BYD3_k127_2142217_24 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009494 256.0
BYD3_k127_2142217_25 Pfam:Pyridox_oxidase K07006 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005974 244.0
BYD3_k127_2142217_26 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001477 249.0
BYD3_k127_2142217_27 maleylacetoacetate isomerase K01800,K01801 - 5.2.1.2,5.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000003547 231.0
BYD3_k127_2142217_28 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS - - - 0.000000000000000000000000000000000000000000004416 168.0
BYD3_k127_2142217_29 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000000001748 126.0
BYD3_k127_2142217_3 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 1.334e-231 749.0
BYD3_k127_2142217_30 Class ii aldolase K01628 - 4.1.2.17 0.00000000000000000000000003365 120.0
BYD3_k127_2142217_4 Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 5.277e-230 732.0
BYD3_k127_2142217_5 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 1.835e-199 638.0
BYD3_k127_2142217_6 Domain of unknown function (DUF3390) K18929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008731 591.0
BYD3_k127_2142217_7 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 576.0
BYD3_k127_2142217_8 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 565.0
BYD3_k127_2142217_9 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 538.0
BYD3_k127_214535_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1253.0
BYD3_k127_214535_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1127.0
BYD3_k127_214535_10 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 361.0
BYD3_k127_214535_11 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 353.0
BYD3_k127_214535_12 HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001295 270.0
BYD3_k127_214535_13 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000003046 253.0
BYD3_k127_214535_14 Bacterial regulatory proteins, tetR family K05501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004821 256.0
BYD3_k127_214535_15 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001577 245.0
BYD3_k127_214535_16 ABC transporter substrate binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000003886 231.0
BYD3_k127_214535_17 - - - - 0.000000000000000000000000000000000000000000000000000008973 198.0
BYD3_k127_214535_19 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000003338 168.0
BYD3_k127_214535_2 UvrD REP K03657 - 3.6.4.12 5.155e-309 963.0
BYD3_k127_214535_20 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.00000000000000000000000000000000000005746 152.0
BYD3_k127_214535_21 Protein of unknown function (DUF2782) - - - 0.0000000000000000000000000000000000008674 144.0
BYD3_k127_214535_22 Belongs to the UPF0250 family K09158 - - 0.00000000000000000000000000002793 119.0
BYD3_k127_214535_3 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.06e-214 677.0
BYD3_k127_214535_4 tail specific protease K03797 - 3.4.21.102 3.814e-197 625.0
BYD3_k127_214535_5 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 500.0
BYD3_k127_214535_6 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004001 475.0
BYD3_k127_214535_7 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 476.0
BYD3_k127_214535_8 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 392.0
BYD3_k127_214535_9 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 365.0
BYD3_k127_2151031_0 dehydrogenase, E1 component K00161,K21416 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 445.0
BYD3_k127_2151031_1 PFAM Transketolase central region K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009833 427.0
BYD3_k127_2151031_2 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000002538 244.0
BYD3_k127_2195757_0 FAD binding domain K13796 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 597.0
BYD3_k127_2195757_1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 314.0
BYD3_k127_2195757_10 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01069 - 3.1.2.6 0.00000000000000000000000005787 111.0
BYD3_k127_2195757_11 nuclease - - - 0.000000000000000000001405 103.0
BYD3_k127_2195757_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 305.0
BYD3_k127_2195757_3 MmgE PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004233 314.0
BYD3_k127_2195757_4 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007766 302.0
BYD3_k127_2195757_5 PrpF protein K09788 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001458 282.0
BYD3_k127_2195757_6 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002711 275.0
BYD3_k127_2195757_7 MarR family - - - 0.00000000000000000000000000000000000000000000000000000000000000002473 233.0
BYD3_k127_2195757_8 PrpF protein K09788 - - 0.0000000000000000000000000000000000000000000000000006636 189.0
BYD3_k127_2195757_9 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000776 128.0
BYD3_k127_2248842_0 Thiamine pyrophosphate enzyme, central domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 592.0
BYD3_k127_2248842_1 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 436.0
BYD3_k127_2248842_2 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 356.0
BYD3_k127_2248842_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008183 284.0
BYD3_k127_2248842_4 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.000000000000000000000000000000000000004254 151.0
BYD3_k127_2248842_5 alpha/beta hydrolase fold - - - 0.00001756 47.0
BYD3_k127_2266241_0 chlorophyll binding K03286,K03640 - - 0.000000000000000000000000003135 125.0
BYD3_k127_2274844_0 NAD dependent epimerase dehydratase K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 418.0
BYD3_k127_2274844_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 333.0
BYD3_k127_2274844_2 Histidine kinase K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000005481 216.0
BYD3_k127_2274844_3 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000005485 143.0
BYD3_k127_2274844_4 - - - - 0.0000000000000000000007499 103.0
BYD3_k127_2274844_5 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000159 70.0
BYD3_k127_2274844_6 ABC-type multidrug transport system ATPase and permease K02021 - - 0.00009733 46.0
BYD3_k127_2293924_0 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 294.0
BYD3_k127_2293924_1 succinyl-diaminopimelate desuccinylase activity - - - 0.00000000000000000000002173 111.0
BYD3_k127_2346179_0 Phospholipase D Active site motif K01115 - 3.1.4.4 1.046e-226 726.0
BYD3_k127_2346179_1 Protein of unknown function (DUF3182) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 368.0
BYD3_k127_2346179_2 Uncharacterised protein family (UPF0227) K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005686 280.0
BYD3_k127_2346179_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000002296 211.0
BYD3_k127_2346179_4 Domain of unknown function (DUF296) K06934 - - 0.000000000000000000000001449 106.0
BYD3_k127_2368087_0 acyl-CoA transferases carnitine dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005815 451.0
BYD3_k127_2368087_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000615 327.0
BYD3_k127_2368087_2 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 308.0
BYD3_k127_2368087_3 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000361 268.0
BYD3_k127_2368087_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08234 - - 0.000000000000000000000000000008856 124.0
BYD3_k127_2390188_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1175.0
BYD3_k127_2390188_1 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 436.0
BYD3_k127_2390188_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 354.0
BYD3_k127_2390188_3 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 333.0
BYD3_k127_2390188_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000641 266.0
BYD3_k127_2390188_5 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001794 257.0
BYD3_k127_2390188_6 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000000000000000000000000000000000000000000587 196.0
BYD3_k127_2390188_7 Molybdate transporter of MFS superfamily - - - 0.0000000000000000000001725 98.0
BYD3_k127_2390188_8 - - - - 0.00000000001384 72.0
BYD3_k127_2419725_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 1.697e-194 624.0
BYD3_k127_2419725_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 403.0
BYD3_k127_2419725_2 Catalyzes the conversion of maleate to fumarate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 304.0
BYD3_k127_2419725_3 - - - - 0.0000000000000000000000000000000000000004974 164.0
BYD3_k127_2419725_4 ketosteroid isomerase - - - 0.00000000000000000000000000000000000004858 156.0
BYD3_k127_2419725_5 - - - - 0.0000000000000000000000001389 119.0
BYD3_k127_2419725_6 ketosteroid isomerase - - - 0.000000000000000000008725 91.0
BYD3_k127_2442968_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 550.0
BYD3_k127_2442968_1 SMART PUA domain containing protein K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005566 456.0
BYD3_k127_2442968_10 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000331 220.0
BYD3_k127_2442968_11 coa-binding K06929 - - 0.00000000000000000000000000000000000000000000000000006569 196.0
BYD3_k127_2442968_12 Biopolymer transport K03559 - - 0.00000000000000000000000000000000000000000000000004168 182.0
BYD3_k127_2442968_13 FR47-like protein - - - 0.000000000000000000000000000000000000000000000000345 182.0
BYD3_k127_2442968_14 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000001385 150.0
BYD3_k127_2442968_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 394.0
BYD3_k127_2442968_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 400.0
BYD3_k127_2442968_4 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005218 377.0
BYD3_k127_2442968_5 cobalamin synthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009412 345.0
BYD3_k127_2442968_6 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 324.0
BYD3_k127_2442968_7 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001652 284.0
BYD3_k127_2442968_8 MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000295 248.0
BYD3_k127_2442968_9 protein conserved in bacteria K09921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007063 248.0
BYD3_k127_2470241_0 fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 585.0
BYD3_k127_2470241_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 483.0
BYD3_k127_2470241_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007156 443.0
BYD3_k127_2470241_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006086 376.0
BYD3_k127_2470241_4 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 290.0
BYD3_k127_2470241_5 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000001972 265.0
BYD3_k127_2470241_6 Belongs to the DnaA family K10763 - - 0.0000000000000000000000000000000000000000000001785 174.0
BYD3_k127_2470241_7 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000002121 130.0
BYD3_k127_2470241_8 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000006833 95.0
BYD3_k127_2470241_9 Protein of unknown function (DUF3108) - - - 0.000000000000000142 92.0
BYD3_k127_2482731_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009312 567.0
BYD3_k127_2482731_1 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 352.0
BYD3_k127_2482731_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009277 346.0
BYD3_k127_2482731_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002158 292.0
BYD3_k127_2482731_4 Belongs to the UPF0255 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004601 260.0
BYD3_k127_2482731_5 diguanylate cyclase - - - 0.0000000000000000000000000000006024 139.0
BYD3_k127_2482731_6 redox protein regulator of disulfide bond formation - - - 0.000000007473 65.0
BYD3_k127_2518907_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K15509 - 1.1.1.308 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 628.0
BYD3_k127_2518907_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006952 278.0
BYD3_k127_2518907_2 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007853 290.0
BYD3_k127_2518907_3 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000004567 183.0
BYD3_k127_2518907_4 MmgE/PrpD family - - - 0.000000000000000000000000000000000003439 157.0
BYD3_k127_2528113_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1497.0
BYD3_k127_2528113_1 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 368.0
BYD3_k127_2528113_2 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003612 254.0
BYD3_k127_2528113_3 Putative FMN-binding domain K07734 - - 0.000000000000000000000000000000000000000000000000000000000000000006098 231.0
BYD3_k127_2528113_4 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000000000000000000000000000002051 219.0
BYD3_k127_2528113_5 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000004817 220.0
BYD3_k127_2528113_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000007086 162.0
BYD3_k127_2528113_7 Protein of unknown function (DUF1499) - - - 0.000000000000000000000000001153 118.0
BYD3_k127_2565501_0 ATP synthase alpha/beta family, nucleotide-binding domain K02412 - 3.6.3.14 2.317e-208 669.0
BYD3_k127_2565501_1 Flagellar motor switch protein K02416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 440.0
BYD3_k127_2565501_10 Flagellar export protein FliJ K02413 - - 0.0000000000000000000008324 100.0
BYD3_k127_2565501_11 flagellar K02418 - - 0.00000000000000000001791 108.0
BYD3_k127_2565501_12 - - - - 0.0000000002588 62.0
BYD3_k127_2565501_2 flagellar motor switch protein K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002801 407.0
BYD3_k127_2565501_3 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004389 334.0
BYD3_k127_2565501_4 Role in flagellar biosynthesis K02421 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006254 269.0
BYD3_k127_2565501_5 Flagellar motor switch K02417,K03225 - - 0.00000000000000000000000000000000000000000000000001296 183.0
BYD3_k127_2565501_6 Flagellar assembly protein FliH K02411 - - 0.00000000000000000000000000000000000000000163 163.0
BYD3_k127_2565501_7 Role in flagellar biosynthesis K02420 - - 0.00000000000000000000000000000007383 126.0
BYD3_k127_2565501_8 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.0000000000000000000000000008054 120.0
BYD3_k127_2565501_9 Flagellar hook-length control protein FliK K02414 - - 0.0000000000000000000002297 109.0
BYD3_k127_2620250_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 480.0
BYD3_k127_2620250_1 Enoyl-(Acyl carrier protein) reductase K00019 - 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 397.0
BYD3_k127_2620250_2 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000000001542 195.0
BYD3_k127_2620250_3 Cupin domain - - - 0.000000000000000000000000000000000000000000000000008243 188.0
BYD3_k127_2620250_4 PFAM Patatin K07001 - - 0.00000000000000000000000000000000000000002644 159.0
BYD3_k127_2620250_5 Protein of unknown function (DUF1622) - - - 0.00000000000000000000004575 114.0
BYD3_k127_262908_0 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006734 329.0
BYD3_k127_262908_1 (ABC) transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 314.0
BYD3_k127_2670509_0 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 2.914e-280 873.0
BYD3_k127_2693489_0 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 2.261e-204 647.0
BYD3_k127_2693489_1 Membrane fusogenic activity K09806 - - 0.00000000000000000008144 92.0
BYD3_k127_2735459_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K01147,K12573 - 3.1.13.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 551.0
BYD3_k127_2735459_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006009 452.0
BYD3_k127_2735459_2 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000000000000003087 125.0
BYD3_k127_2738899_0 C-terminal region of aryl-sulfatase K01130 - 3.1.6.1 7.643e-227 711.0
BYD3_k127_2738899_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 576.0
BYD3_k127_2738899_10 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000001594 108.0
BYD3_k127_2738899_11 - - - - 0.0000000000000556 80.0
BYD3_k127_2738899_2 glycosyltransferase 36 associated K00702,K13688 - 2.4.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 397.0
BYD3_k127_2738899_3 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 353.0
BYD3_k127_2738899_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007484 296.0
BYD3_k127_2738899_5 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000031 278.0
BYD3_k127_2738899_6 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000008759 257.0
BYD3_k127_2738899_7 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000000000000003832 213.0
BYD3_k127_2738899_8 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000001463 209.0
BYD3_k127_2738899_9 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000002791 171.0
BYD3_k127_2807197_0 SIR2-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009941 355.0
BYD3_k127_2807197_1 major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002857 273.0
BYD3_k127_2807197_2 decarboxylase K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000006982 170.0
BYD3_k127_2807197_3 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000002008 168.0
BYD3_k127_2815995_0 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 436.0
BYD3_k127_2815995_1 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K02003,K05685,K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 294.0
BYD3_k127_2815995_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007925 259.0
BYD3_k127_2815995_3 CRP FNR family K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000008417 228.0
BYD3_k127_290127_0 III protein, CoA-transferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 552.0
BYD3_k127_290127_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 319.0
BYD3_k127_290127_2 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 309.0
BYD3_k127_290127_3 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000007049 203.0
BYD3_k127_290127_4 taurine catabolism dioxygenase K03119 - 1.14.11.17 0.0000000000000000000000000000000000000000000000003877 188.0
BYD3_k127_290127_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000003776 101.0
BYD3_k127_2916938_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 1.421e-312 982.0
BYD3_k127_2916938_1 Belongs to the catalase family K03781 - 1.11.1.6 6.851e-219 687.0
BYD3_k127_2916938_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 402.0
BYD3_k127_2916938_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002074 250.0
BYD3_k127_2916938_4 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000000000000000000000000003217 231.0
BYD3_k127_2916938_5 Peptidase family S51 - - - 0.000000000000000000000000000000000000000000000000000000000000002235 226.0
BYD3_k127_2916938_6 MFS_1 like family - - - 0.00000000000000000000000000000000000000000000003982 184.0
BYD3_k127_2916938_7 Evidence 4 Homologs of previously reported genes of - - - 0.0000000001076 71.0
BYD3_k127_2965942_0 COG1042 Acyl-CoA synthetase (NDP forming) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 506.0
BYD3_k127_2965942_1 Malate/L-lactate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 469.0
BYD3_k127_2965942_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 333.0
BYD3_k127_2965942_3 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006601 258.0
BYD3_k127_2965942_4 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000001053 214.0
BYD3_k127_2965942_5 thiolester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000001207 213.0
BYD3_k127_2965942_6 Zinc-binding dehydrogenase K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000002611 183.0
BYD3_k127_2966601_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1342.0
BYD3_k127_2966601_1 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362,K05297 - 1.18.1.1,1.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 528.0
BYD3_k127_2966601_2 response regulator K07183 - - 0.0000000000000000000000000002836 134.0
BYD3_k127_3008675_0 Transmembrane secretion effector - - - 1.143e-210 667.0
BYD3_k127_3008675_1 HDOD domain - - - 7.769e-206 666.0
BYD3_k127_3008675_10 Anti-sigma-K factor rskA - - - 0.000000000000000000000000001472 121.0
BYD3_k127_3008675_11 - - - - 0.00000000005939 74.0
BYD3_k127_3008675_2 STAS domain K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 597.0
BYD3_k127_3008675_3 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 419.0
BYD3_k127_3008675_4 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000008418 255.0
BYD3_k127_3008675_5 Adenosyltransferase K00798 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000001343 247.0
BYD3_k127_3008675_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000001598 178.0
BYD3_k127_3008675_7 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000007312 138.0
BYD3_k127_3008675_8 Cytochrome c - - - 0.00000000000000000000000000000001636 132.0
BYD3_k127_3008675_9 Cytochrome c, class I - - - 0.00000000000000000000000000000004863 128.0
BYD3_k127_3010059_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 1.388e-220 690.0
BYD3_k127_3010059_1 Belongs to the peptidase S1C family K04691,K04772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004425 475.0
BYD3_k127_3010059_10 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000005216 265.0
BYD3_k127_3010059_11 PFAM Cytochrome C1 K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002767 268.0
BYD3_k127_3010059_12 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000000001666 206.0
BYD3_k127_3010059_13 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.00000000000000000000000000000000000000000000000005299 179.0
BYD3_k127_3010059_14 stringent starvation protein B K03600 - - 0.0000000000000000000000000000000000001764 154.0
BYD3_k127_3010059_15 Psort location Cytoplasmic, score K01523 - 3.6.1.31 0.000000000000000000000000000000002043 141.0
BYD3_k127_3010059_16 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000000001519 118.0
BYD3_k127_3010059_17 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000000001056 108.0
BYD3_k127_3010059_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 414.0
BYD3_k127_3010059_3 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 402.0
BYD3_k127_3010059_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 390.0
BYD3_k127_3010059_5 Glutathione S-transferase, N-terminal domain K03599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000689 352.0
BYD3_k127_3010059_6 Hydantoinase/oxoprolinase N-terminal region K01469 - 3.5.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004338 342.0
BYD3_k127_3010059_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007345 336.0
BYD3_k127_3010059_8 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 318.0
BYD3_k127_3010059_9 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 320.0
BYD3_k127_3015453_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1292.0
BYD3_k127_3015453_1 Extracellular solute-binding protein - - - 5.902e-307 956.0
BYD3_k127_3015453_10 - - - - 0.000000000002367 70.0
BYD3_k127_3015453_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 509.0
BYD3_k127_3015453_3 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 508.0
BYD3_k127_3015453_4 Peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 503.0
BYD3_k127_3015453_5 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000083 368.0
BYD3_k127_3015453_6 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 296.0
BYD3_k127_3015453_7 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000001048 127.0
BYD3_k127_3015453_8 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.000000000000000000000000811 118.0
BYD3_k127_3015453_9 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000001254 74.0
BYD3_k127_3047084_0 Lon protease (S16) C-terminal proteolytic domain K01338 - 3.4.21.53 0.0 1063.0
BYD3_k127_3047084_1 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 1.37e-243 774.0
BYD3_k127_3047084_2 Peptidase family M20/M25/M40 - - - 8.459e-211 664.0
BYD3_k127_3047084_3 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004591 533.0
BYD3_k127_3047084_4 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 407.0
BYD3_k127_3047084_5 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006574 360.0
BYD3_k127_3047084_6 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007717 358.0
BYD3_k127_3047084_7 Thioesterase - - - 0.000000000000000000000000000000000000000002399 165.0
BYD3_k127_3047084_8 Bacterial protein of unknown function (DUF883) - - - 0.00000000000001016 85.0
BYD3_k127_3051742_0 Ring hydroxylating alpha subunit (catalytic domain) K00499 - 1.14.15.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009826 536.0
BYD3_k127_3051742_1 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 389.0
BYD3_k127_3051742_2 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002669 232.0
BYD3_k127_3051742_3 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000000000000000000000000000000000001973 184.0
BYD3_k127_3051742_4 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000001203 123.0
BYD3_k127_3085827_0 thiolester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 346.0
BYD3_k127_3085827_1 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 296.0
BYD3_k127_3085827_2 Acyl-CoA dehydrogenase, middle domain - - - 0.000000000000000000000000000000000000000000000000000000176 210.0
BYD3_k127_3085827_3 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000002486 208.0
BYD3_k127_3085827_4 alpha, beta - - - 0.00000000000006255 74.0
BYD3_k127_311730_0 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 622.0
BYD3_k127_311730_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006735 523.0
BYD3_k127_311730_2 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001026 260.0
BYD3_k127_311730_3 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000000000000000000000000000000000000000000000000002549 241.0
BYD3_k127_311730_4 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000000000000292 142.0
BYD3_k127_311730_5 succinylglutamate desuccinylase K06987 - - 0.0000000000000000000002556 110.0
BYD3_k127_3134019_0 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032 - - 1.752e-253 802.0
BYD3_k127_3134019_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 2.321e-229 732.0
BYD3_k127_3134019_10 - - - - 0.00000000000000000000000006876 121.0
BYD3_k127_3134019_11 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.000000000000000000000008097 103.0
BYD3_k127_3134019_2 Glycosyltransferase family 28 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 574.0
BYD3_k127_3134019_3 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000862 507.0
BYD3_k127_3134019_4 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007495 450.0
BYD3_k127_3134019_5 Prokaryotic glutathione synthetase, ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 424.0
BYD3_k127_3134019_6 mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000556 370.0
BYD3_k127_3134019_7 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 336.0
BYD3_k127_3134019_8 Glycosyltransferase family 28 C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006411 335.0
BYD3_k127_3134019_9 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000003693 208.0
BYD3_k127_32004_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1086.0
BYD3_k127_32004_1 protein synthesis factor, GTP-binding K06207 - - 1.764e-285 915.0
BYD3_k127_32004_2 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 2.669e-270 837.0
BYD3_k127_32004_3 Belongs to the thiolase family K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006489 579.0
BYD3_k127_32004_4 Chalcone isomerase-like - - - 0.000000000000000000000000000000000784 141.0
BYD3_k127_32004_5 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.0000000001311 62.0
BYD3_k127_3222260_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 5.474e-276 866.0
BYD3_k127_3222260_1 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 1.78e-261 826.0
BYD3_k127_3222260_2 AMP-binding enzyme C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004155 545.0
BYD3_k127_3222260_3 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 351.0
BYD3_k127_3222260_4 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000001898 229.0
BYD3_k127_3222260_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000007527 137.0
BYD3_k127_3263095_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 8.335e-248 771.0
BYD3_k127_3263095_1 COG0644 Dehydrogenases (flavoproteins) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 309.0
BYD3_k127_3281473_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006905 574.0
BYD3_k127_3281473_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 464.0
BYD3_k127_3281473_10 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000006496 154.0
BYD3_k127_3281473_11 Tautomerase enzyme K01821 - 5.3.2.6 0.00000000000002862 86.0
BYD3_k127_3281473_2 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004376 452.0
BYD3_k127_3281473_3 argininosuccinate lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008274 371.0
BYD3_k127_3281473_4 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006598 346.0
BYD3_k127_3281473_5 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 296.0
BYD3_k127_3281473_6 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000212 284.0
BYD3_k127_3281473_7 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000008484 247.0
BYD3_k127_3281473_8 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000002109 215.0
BYD3_k127_3281473_9 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000007788 217.0
BYD3_k127_3283530_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1275.0
BYD3_k127_3283530_1 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 5.508e-257 803.0
BYD3_k127_3283530_10 oxidation protein K17227 - - 0.0000000000000000000000000000000000008594 141.0
BYD3_k127_3283530_11 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000006163 122.0
BYD3_k127_3283530_12 Belongs to the N-Me-Phe pilin family K02650 - - 0.000000000000000000000000000003577 124.0
BYD3_k127_3283530_13 Pilin (bacterial filament) K02650 - - 0.0000000000000000000000000009478 117.0
BYD3_k127_3283530_14 dna polymerase III (Chi subunit) K02339 - 2.7.7.7 0.00000000000000009005 81.0
BYD3_k127_3283530_2 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 494.0
BYD3_k127_3283530_3 peptidase m48, ste24p - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 481.0
BYD3_k127_3283530_4 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 353.0
BYD3_k127_3283530_5 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005818 352.0
BYD3_k127_3283530_6 Thiosulfate-oxidizing multienzyme system protein SoxA K17222,K19713 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005507,GO:0005515,GO:0005575,GO:0005623,GO:0006091,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0016667,GO:0016669,GO:0016740,GO:0016782,GO:0016783,GO:0018192,GO:0018193,GO:0018198,GO:0018307,GO:0019417,GO:0019538,GO:0020037,GO:0022900,GO:0036211,GO:0042597,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046872,GO:0046906,GO:0046914,GO:0046982,GO:0046983,GO:0048037,GO:0055114,GO:0071704,GO:0097159,GO:0098822,GO:1901363,GO:1901564 1.8.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004908 283.0
BYD3_k127_3283530_7 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000001578 211.0
BYD3_k127_3283530_8 sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000001607 177.0
BYD3_k127_3283530_9 Cytochrome c K17223 - - 0.0000000000000000000000000000000000000002659 157.0
BYD3_k127_3285293_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 1.633e-218 696.0
BYD3_k127_3285293_1 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005027 429.0
BYD3_k127_3285293_3 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.0000000000000000000000000000000000000000000000000000004889 199.0
BYD3_k127_3285293_4 Branched-chain amino acid ATP-binding cassette transporter K06861 - - 0.00000000000000000000000000000000000000000000000000008921 188.0
BYD3_k127_3285293_5 protein conserved in bacteria K11719 - - 0.0000000000000000000000000000000000000000000000009673 180.0
BYD3_k127_3285293_6 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000004517 188.0
BYD3_k127_3285293_7 - K01992 - - 0.000000000000000000000000000000000000001026 156.0
BYD3_k127_3285293_8 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000000004359 123.0
BYD3_k127_3289285_0 COG0501 Zn-dependent protease with chaperone function - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 398.0
BYD3_k127_3289285_1 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005365 318.0
BYD3_k127_3289285_2 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000001176 244.0
BYD3_k127_3289285_3 DEAD DEAH box helicase K03724 - - 0.000000000000000000000000000000000000000000000000008542 183.0
BYD3_k127_3319119_0 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 552.0
BYD3_k127_3319119_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005909 407.0
BYD3_k127_3319119_2 Protein of unknown function (DUF2891) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 305.0
BYD3_k127_3319119_3 MgtC family K07507 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001789 265.0
BYD3_k127_3319119_4 glutamate synthase - - - 0.0000000000000000000002508 97.0
BYD3_k127_333794_0 Glycosyl hydrolase family 57 - - - 1.786e-221 700.0
BYD3_k127_333794_1 Phosphoglucose isomerase K01810 - 5.3.1.9 1.276e-219 700.0
BYD3_k127_333794_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 4.413e-197 623.0
BYD3_k127_333794_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 572.0
BYD3_k127_333794_4 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 537.0
BYD3_k127_333794_5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005931 539.0
BYD3_k127_333794_6 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 516.0
BYD3_k127_333794_7 PFAM NAD-dependent epimerase dehydratase K22025 - 1.1.1.410 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004585 342.0
BYD3_k127_333794_8 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006524 260.0
BYD3_k127_333794_9 alpha-glucan phosphorylase K00688 - 2.4.1.1 0.00000000000000000001603 93.0
BYD3_k127_3340625_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 2.746e-231 737.0
BYD3_k127_3340625_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005683 456.0
BYD3_k127_3340625_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009074 331.0
BYD3_k127_3340625_3 myo-inosose-2 dehydratase activity K00457,K06606 - 1.13.11.27,5.3.99.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 289.0
BYD3_k127_3340625_4 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000001996 181.0
BYD3_k127_3340625_5 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000004815 147.0
BYD3_k127_3340625_6 - - - - 0.000000000000000000000000000000003124 134.0
BYD3_k127_3340625_7 response regulator, receiver - - - 0.000001518 58.0
BYD3_k127_3398385_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.25e-292 908.0
BYD3_k127_3398385_1 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003347 391.0
BYD3_k127_3398385_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000002463 94.0
BYD3_k127_3433696_0 Fumarase C C-terminus K01744 - 4.3.1.1 8.941e-228 734.0
BYD3_k127_3433696_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001526 256.0
BYD3_k127_3433696_2 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000006514 205.0
BYD3_k127_3433696_3 - - - - 0.0000000000000000000000000000000000000000000000000000006697 199.0
BYD3_k127_3433696_4 mandelate racemase muconate lactonizing K01781 - 5.1.2.2 0.000000000000000000000000000000000000000000000000000002879 215.0
BYD3_k127_3433696_5 Serine aminopeptidase, S33 - - - 0.000000000002419 68.0
BYD3_k127_3433696_6 - - - - 0.0003248 47.0
BYD3_k127_3436416_0 CoA binding domain K09181 - - 5.217e-309 966.0
BYD3_k127_3436416_1 COG0044 Dihydroorotase and related cyclic amidohydrolases - - - 1.825e-210 663.0
BYD3_k127_3436416_10 - - - - 0.00000000000000000001908 94.0
BYD3_k127_3436416_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 1.296e-197 642.0
BYD3_k127_3436416_3 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008623 282.0
BYD3_k127_3436416_4 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001068 279.0
BYD3_k127_3436416_5 Bacterial extracellular solute-binding proteins, family 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001521 253.0
BYD3_k127_3436416_6 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000006953 235.0
BYD3_k127_3436416_7 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000028 201.0
BYD3_k127_3436416_8 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000000000000000000000000001218 172.0
BYD3_k127_3436416_9 protein conserved in bacteria - - - 0.00000000000000000000002957 117.0
BYD3_k127_3441682_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1313.0
BYD3_k127_3441682_1 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.0 1238.0
BYD3_k127_3441682_10 MASE1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004136 287.0
BYD3_k127_3441682_11 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006083 278.0
BYD3_k127_3441682_12 Two component transcriptional regulator, LuxR family K13041 - - 0.0000000000000000000000000000000000000000000000000006747 193.0
BYD3_k127_3441682_13 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000000000000000000000223 166.0
BYD3_k127_3441682_14 Stress protein K05791 - - 0.00000000000000000008105 95.0
BYD3_k127_3441682_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 9.859e-309 959.0
BYD3_k127_3441682_3 Tripartite tricarboxylate transporter TctA family - - - 1.004e-219 693.0
BYD3_k127_3441682_4 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008899 605.0
BYD3_k127_3441682_5 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 548.0
BYD3_k127_3441682_6 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 551.0
BYD3_k127_3441682_7 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009726 477.0
BYD3_k127_3441682_8 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 454.0
BYD3_k127_3441682_9 Molybdate transporter of MFS superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 372.0
BYD3_k127_3459246_0 Caspase domain - - - 6.39e-226 718.0
BYD3_k127_3459246_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 344.0
BYD3_k127_3459246_2 MmgE/PrpD family - - - 0.00000000000000000000000004308 113.0
BYD3_k127_3459246_3 oxidation-reduction process K09022 - 3.5.99.10 0.000000000000000002977 89.0
BYD3_k127_3459246_4 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000001163 84.0
BYD3_k127_3459246_5 Histidine kinase - - - 0.000000000000001105 79.0
BYD3_k127_3459246_6 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000001211 82.0
BYD3_k127_3475067_0 Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate K01612,K03182,K16874 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044464 4.1.1.61,4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006037 436.0
BYD3_k127_3475067_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005939 293.0
BYD3_k127_3475067_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001869 289.0
BYD3_k127_3475067_3 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000264 275.0
BYD3_k127_3475067_4 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005547 250.0
BYD3_k127_3475067_5 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000003223 243.0
BYD3_k127_3475067_6 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000004426 207.0
BYD3_k127_3475067_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.00000000000000000000000298 108.0
BYD3_k127_3475998_0 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 1.15e-272 843.0
BYD3_k127_3475998_1 ABC transporter, transmembrane region K06147,K06148,K18889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 621.0
BYD3_k127_3475998_2 Domain of unknown function DUF21 K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 610.0
BYD3_k127_3475998_3 ABC transporter, transmembrane region K06147,K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 585.0
BYD3_k127_3475998_4 Evidence Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005373 420.0
BYD3_k127_3475998_5 Binding-protein-dependent transport system inner membrane component K02042 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 388.0
BYD3_k127_3475998_6 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 324.0
BYD3_k127_3475998_7 cytochrome c oxidase, cbb3-type, subunit II K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 283.0
BYD3_k127_3475998_8 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001629 295.0
BYD3_k127_3477854_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007648 394.0
BYD3_k127_3477854_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007035 302.0
BYD3_k127_3477854_2 TIM-barrel fold metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000012 306.0
BYD3_k127_3477854_3 Enoyl-(Acyl carrier protein) reductase K00059,K00068 - 1.1.1.100,1.1.1.140 0.00000000000000000000000000000000000000000000000000000000000000004345 233.0
BYD3_k127_3477854_4 Domain of Unknown Function (DUF349) - - - 0.0000000000000000000000000000000000000000000002937 184.0
BYD3_k127_3477854_5 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000001296 87.0
BYD3_k127_3477854_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000009072 93.0
BYD3_k127_3477854_7 - - - - 0.00003383 49.0
BYD3_k127_3508802_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1080.0
BYD3_k127_3508802_1 succinate dehydrogenase fumarate reductase, flavoprotein subunit K00394 - 1.8.99.2 0.0 1050.0
BYD3_k127_3508802_10 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000222 268.0
BYD3_k127_3508802_11 SMART phosphoesterase PHP domain protein K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000003387 272.0
BYD3_k127_3508802_12 reductase, beta subunit K00395 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000001389 228.0
BYD3_k127_3508802_13 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) - - - 0.00000000000000000000000000000000000000000000000000000000000000124 238.0
BYD3_k127_3508802_14 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000000000000000000000005455 201.0
BYD3_k127_3508802_15 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000006295 184.0
BYD3_k127_3508802_16 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000001876 121.0
BYD3_k127_3508802_17 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000003459 85.0
BYD3_k127_3508802_19 - - - - 0.00000002141 57.0
BYD3_k127_3508802_2 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 1.957e-214 670.0
BYD3_k127_3508802_3 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 2.133e-199 628.0
BYD3_k127_3508802_4 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004829 499.0
BYD3_k127_3508802_5 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K12972 - 1.1.1.79,1.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 336.0
BYD3_k127_3508802_6 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 326.0
BYD3_k127_3508802_7 Belongs to the SUA5 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005053 274.0
BYD3_k127_3508802_8 Biotin-lipoyl like K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007602 287.0
BYD3_k127_3508802_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001068 275.0
BYD3_k127_358678_0 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 0.0 1022.0
BYD3_k127_358678_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.948e-228 715.0
BYD3_k127_358678_10 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000000000000003342 151.0
BYD3_k127_358678_11 - - - - 0.0000000000000000000000000000001784 127.0
BYD3_k127_358678_12 bacterial OsmY and nodulation domain K04065 - - 0.0000005003 58.0
BYD3_k127_358678_2 CoA-binding domain protein - - - 7.377e-196 633.0
BYD3_k127_358678_3 Nucleotidyl transferase K00966 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 536.0
BYD3_k127_358678_4 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 455.0
BYD3_k127_358678_5 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 382.0
BYD3_k127_358678_6 PFAM Amidohydrolase 2 K18982 - 5.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 302.0
BYD3_k127_358678_7 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003372 287.0
BYD3_k127_358678_8 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.000000000000000000000000000000000000000000000000000000000436 209.0
BYD3_k127_358678_9 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.000000000000000000000000000000000000000000000000000000000867 221.0
BYD3_k127_3589497_0 Bacterial protein of unknown function (DUF839) K07093 - - 1.699e-231 734.0
BYD3_k127_3589497_1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 4.787e-206 649.0
BYD3_k127_3589497_10 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000003161 183.0
BYD3_k127_3589497_11 AraC-like ligand binding domain - - - 0.0000000000000000000000000000000000000000000006195 169.0
BYD3_k127_3589497_12 DUF35 OB-fold domain, acyl-CoA-associated - - - 0.0000000000000000000000000000000000000000003131 161.0
BYD3_k127_3589497_13 Alkylmercury lyase - - - 0.0000000000000000000000000004098 129.0
BYD3_k127_3589497_14 Major facilitator Superfamily - - - 0.00000000003497 67.0
BYD3_k127_3589497_16 ABC transporter substrate binding protein K01989 - - 0.000316 44.0
BYD3_k127_3589497_2 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 2.653e-202 643.0
BYD3_k127_3589497_3 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 533.0
BYD3_k127_3589497_4 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 345.0
BYD3_k127_3589497_5 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009453 342.0
BYD3_k127_3589497_6 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001237 292.0
BYD3_k127_3589497_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009516 276.0
BYD3_k127_3589497_8 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000003629 223.0
BYD3_k127_3589497_9 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000001238 191.0
BYD3_k127_3610400_0 Gamma-glutamyltranspeptidase - - - 1.016e-209 669.0
BYD3_k127_3610400_1 Circadian K08482 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 524.0
BYD3_k127_3610400_2 two-component system sensor protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 324.0
BYD3_k127_3610400_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006869 270.0
BYD3_k127_3610400_4 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001966 243.0
BYD3_k127_3647991_0 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000678 586.0
BYD3_k127_3647991_1 Ketopantoate reductase PanE/ApbA C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004502 499.0
BYD3_k127_3647991_10 Cupin domain - - - 0.00000000000008863 84.0
BYD3_k127_3647991_2 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009071 454.0
BYD3_k127_3647991_3 4,5-dihydroxyphthalate decarboxylase K04102 - 4.1.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 449.0
BYD3_k127_3647991_4 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004862 454.0
BYD3_k127_3647991_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005484 280.0
BYD3_k127_3647991_6 GAF domain - - - 0.0000000000000000000000000000000000000000000000000004231 210.0
BYD3_k127_3647991_7 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000002339 141.0
BYD3_k127_3647991_8 PFAM Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000006729 125.0
BYD3_k127_3647991_9 Protein of unknown function (DUF861) - - - 0.00000000000006194 77.0
BYD3_k127_3657268_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0 1021.0
BYD3_k127_3657268_1 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 6.261e-241 767.0
BYD3_k127_3657268_10 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000002392 195.0
BYD3_k127_3657268_11 Belongs to the ompA family K03286 - - 0.0000000001882 69.0
BYD3_k127_3657268_2 Belongs to the UbiD family K03182 - 4.1.1.98 4.541e-233 736.0
BYD3_k127_3657268_3 Psort location Cytoplasmic, score 7.50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 520.0
BYD3_k127_3657268_4 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 429.0
BYD3_k127_3657268_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005715 293.0
BYD3_k127_3657268_6 CO dehydrogenase flavoprotein C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004148 250.0
BYD3_k127_3657268_7 Universal stress protein UspA - - - 0.0000000000000000000000000000000000000000000000000000000000000002132 233.0
BYD3_k127_3657268_8 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000002344 241.0
BYD3_k127_3657268_9 ABC transporter substrate binding protein - - - 0.000000000000000000000000000000000000000000000000000000000161 215.0
BYD3_k127_3658010_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 1.266e-223 709.0
BYD3_k127_3658010_1 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 527.0
BYD3_k127_3658010_10 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000003479 164.0
BYD3_k127_3658010_11 carboxymuconolactone decarboxylase - - - 0.00000000000000000000000000008956 130.0
BYD3_k127_3658010_12 Flagellar hook-basal body complex protein FliE K02408 - - 0.0000000000000000000000000009868 117.0
BYD3_k127_3658010_13 Dodecin K09165 - - 0.000000000000000000001012 99.0
BYD3_k127_3658010_14 Protein of unknown function (DUF3606) - - - 0.0000000001029 67.0
BYD3_k127_3658010_2 The M ring may be actively involved in energy transduction K02409 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005028 499.0
BYD3_k127_3658010_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10943 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 495.0
BYD3_k127_3658010_4 signal transduction histidine kinase K10942 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005902 303.0
BYD3_k127_3658010_5 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000305 282.0
BYD3_k127_3658010_6 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003088 273.0
BYD3_k127_3658010_7 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000004262 248.0
BYD3_k127_3658010_8 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000004229 238.0
BYD3_k127_3658010_9 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000004856 211.0
BYD3_k127_3660002_0 Histidine kinase-like ATPases - - - 9.393e-250 833.0
BYD3_k127_3660002_1 Mediates influx of magnesium ions K03284,K16074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 456.0
BYD3_k127_3660002_2 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 407.0
BYD3_k127_3660002_3 AsmA family K07289,K07290 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000207 284.0
BYD3_k127_3690703_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008046 378.0
BYD3_k127_3690703_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 368.0
BYD3_k127_3690703_2 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 327.0
BYD3_k127_3690703_3 AAA domain, putative AbiEii toxin, Type IV TA system K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 317.0
BYD3_k127_3690703_4 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 290.0
BYD3_k127_3690703_5 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000000001488 229.0
BYD3_k127_3690703_6 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.00000000000000000000000000000000000000000000000000009736 191.0
BYD3_k127_3690703_7 Phasin protein - - - 0.00000000000000000000000000000000000000004403 158.0
BYD3_k127_3690703_8 ABC-type transport auxiliary lipoprotein component K18480 - - 0.00000000000000000000000000000001965 145.0
BYD3_k127_3690703_9 ABC transporter permease K02066 - - 0.0000000000000000000000001952 106.0
BYD3_k127_3717270_0 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 1.212e-274 869.0
BYD3_k127_3717270_1 Adenylate and Guanylate cyclase catalytic domain - - - 3.37e-236 767.0
BYD3_k127_3717270_2 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 474.0
BYD3_k127_3717270_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003199 397.0
BYD3_k127_3717270_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 357.0
BYD3_k127_3717270_5 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 0.00000000000000000000000000000000000000000000000000000000000000004189 237.0
BYD3_k127_3717270_6 phosphatidate phosphatase activity K09474,K19302 - 3.1.3.2,3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000003155 236.0
BYD3_k127_3717270_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.000000000000000000000000000005435 124.0
BYD3_k127_3732067_0 Gamma-glutamyltranspeptidase - - - 5.693e-239 751.0
BYD3_k127_3732067_1 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 607.0
BYD3_k127_3732067_10 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000008032 219.0
BYD3_k127_3732067_11 - - - - 0.000000000000000000000000000000000000000001159 171.0
BYD3_k127_3732067_12 monooxygenase activity - - - 0.0000000000000000000000000000000000000006895 164.0
BYD3_k127_3732067_13 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.0000000000000000000000005243 117.0
BYD3_k127_3732067_14 helix_turn_helix, Lux Regulon - - - 0.00000000000000001553 95.0
BYD3_k127_3732067_15 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.0000000000002258 71.0
BYD3_k127_3732067_16 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K13039 - 4.1.1.79 0.000007611 55.0
BYD3_k127_3732067_17 17 kDa surface antigen - - - 0.0001428 52.0
BYD3_k127_3732067_2 Amidohydrolase K01686 - 4.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 503.0
BYD3_k127_3732067_3 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000897 488.0
BYD3_k127_3732067_4 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008091 439.0
BYD3_k127_3732067_5 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 440.0
BYD3_k127_3732067_6 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 399.0
BYD3_k127_3732067_7 Hydrolases of the alpha beta superfamily K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005005 310.0
BYD3_k127_3732067_8 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily K06968 - 2.1.1.186 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001413 284.0
BYD3_k127_3732067_9 Asp Glu hydantoin racemase K01799 - 5.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004658 272.0
BYD3_k127_3761385_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000742 327.0
BYD3_k127_3761385_1 COG3639 ABC-type phosphate phosphonate transport system, permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008314 286.0
BYD3_k127_3761385_2 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000002384 259.0
BYD3_k127_3761385_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000006355 162.0
BYD3_k127_3761385_4 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000007953 150.0
BYD3_k127_3761385_5 - - - - 0.000000000000001269 79.0
BYD3_k127_3761385_6 Binding-protein-dependent transport system inner membrane component K02042 - - 0.0006524 42.0
BYD3_k127_3789862_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 1.853e-238 755.0
BYD3_k127_3789862_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 3.944e-233 744.0
BYD3_k127_3789862_10 STAS domain K06378 - - 0.0000000000000000000000000004053 118.0
BYD3_k127_3789862_11 Belongs to the UPF0255 family - - - 0.00000000000000000838 98.0
BYD3_k127_3789862_12 Iron-binding zinc finger CDGSH type K05710 - - 0.000000000000003438 78.0
BYD3_k127_3789862_13 - - - - 0.0002075 48.0
BYD3_k127_3789862_2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01576,K01652 - 2.2.1.6,4.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 592.0
BYD3_k127_3789862_3 CHASE2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 613.0
BYD3_k127_3789862_4 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 428.0
BYD3_k127_3789862_5 hydrolases or acyltransferases, alpha beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 413.0
BYD3_k127_3789862_6 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 394.0
BYD3_k127_3789862_7 PFAM Acyl-CoA dehydrogenase type 2 K16047 - 1.14.14.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005918 290.0
BYD3_k127_3789862_8 Phosphoglycerate mutase K15634 - 5.4.2.12 0.00000000000000000000000000000000000000000000001598 178.0
BYD3_k127_3789862_9 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000001269 148.0
BYD3_k127_3858499_0 ASPIC and UnbV - - - 1.252e-293 930.0
BYD3_k127_3858499_1 TonB dependent receptor K02014 - - 3.447e-207 667.0
BYD3_k127_3858499_10 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008781 303.0
BYD3_k127_3858499_11 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 288.0
BYD3_k127_3858499_12 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 300.0
BYD3_k127_3858499_13 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003062 281.0
BYD3_k127_3858499_14 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004348 281.0
BYD3_k127_3858499_15 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000001071 264.0
BYD3_k127_3858499_16 PFAM amine oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001574 281.0
BYD3_k127_3858499_17 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003711 264.0
BYD3_k127_3858499_18 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000354 241.0
BYD3_k127_3858499_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001742 251.0
BYD3_k127_3858499_2 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000964 586.0
BYD3_k127_3858499_20 Membrane dipeptidase (Peptidase family M19) - - - 0.00000000000000000000000000000000000000000000000000000000000002204 228.0
BYD3_k127_3858499_21 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000003187 227.0
BYD3_k127_3858499_23 PAP2 superfamily - - - 0.0000000000000000000000000000000000002232 152.0
BYD3_k127_3858499_24 P-aminobenzoate N-oxygenase AurF - - - 0.0000000000000000000000000001599 132.0
BYD3_k127_3858499_25 YHS domain protein - - - 0.000000000000000000000000002895 119.0
BYD3_k127_3858499_26 Chalcone isomerase-like - - - 0.0000000000000000000005209 107.0
BYD3_k127_3858499_27 ketosteroid isomerase - - - 0.000000000000000000001483 109.0
BYD3_k127_3858499_28 ThiS family K03154 - - 0.000000000000000000002805 94.0
BYD3_k127_3858499_29 PFAM Bacterial transferase hexapeptide (three repeats) - - - 0.00000000000000000008875 98.0
BYD3_k127_3858499_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 518.0
BYD3_k127_3858499_30 - - - - 0.00000000000000128 87.0
BYD3_k127_3858499_31 Erythromycin esterase K06880 - - 0.00000000005006 75.0
BYD3_k127_3858499_4 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 477.0
BYD3_k127_3858499_5 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 449.0
BYD3_k127_3858499_6 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005475 433.0
BYD3_k127_3858499_7 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 358.0
BYD3_k127_3858499_8 Mammalian cell entry related domain protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 322.0
BYD3_k127_3858499_9 GH3 auxin-responsive promoter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 327.0
BYD3_k127_3859222_0 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006299 468.0
BYD3_k127_3859222_1 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 375.0
BYD3_k127_3859222_10 - - - - 0.0000000000000000000000000000000000000000005903 169.0
BYD3_k127_3859222_11 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000002372 164.0
BYD3_k127_3859222_12 nuclease - - - 0.000000000000000000000000000000000000005731 151.0
BYD3_k127_3859222_13 COG1042 Acyl-CoA synthetase (NDP forming) K09181 - - 0.0000000000000000000000009092 105.0
BYD3_k127_3859222_14 - - - - 0.000000000008008 68.0
BYD3_k127_3859222_15 - - - - 0.000000003809 62.0
BYD3_k127_3859222_16 - - - - 0.00000973 53.0
BYD3_k127_3859222_2 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004684 370.0
BYD3_k127_3859222_3 Alpha beta hydrolase K01561 - 3.8.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 297.0
BYD3_k127_3859222_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002938 293.0
BYD3_k127_3859222_5 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005248 269.0
BYD3_k127_3859222_6 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000006281 272.0
BYD3_k127_3859222_7 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000001147 217.0
BYD3_k127_3859222_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000102 173.0
BYD3_k127_3859222_9 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000005177 173.0
BYD3_k127_3864141_0 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 425.0
BYD3_k127_3864141_1 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006832 347.0
BYD3_k127_3864141_2 phospholipase K01058 - 3.1.1.32,3.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000002607 259.0
BYD3_k127_3864141_3 Belongs to the BI1 family K19416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004284 250.0
BYD3_k127_3864141_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.0000000000000000000000000000000000000000000000000000000000000000001547 231.0
BYD3_k127_3864141_5 glyoxalase Bleomycin resistance protein - - - 0.0000000000000000000000000000000000000000000000000000004347 198.0
BYD3_k127_3864141_6 Putative zinc- or iron-chelating domain - - - 0.00000000000000006249 91.0
BYD3_k127_3864141_7 - - - - 0.00000004586 59.0
BYD3_k127_3864141_8 Cupin 2, conserved barrel domain protein K19547 - 5.3.3.19 0.000004948 57.0
BYD3_k127_3872491_0 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases K00101 - 1.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 465.0
BYD3_k127_3872491_1 Aminocarboxymuconate-semialdehyde decarboxylase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003949 410.0
BYD3_k127_3872491_10 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005462 273.0
BYD3_k127_3872491_11 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000002538 213.0
BYD3_k127_3872491_12 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000001162 195.0
BYD3_k127_3872491_13 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000000000000000000000000000003739 154.0
BYD3_k127_3872491_14 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000006386 126.0
BYD3_k127_3872491_15 Endoribonuclease L-PSP - - - 0.000000000001048 81.0
BYD3_k127_3872491_16 oxidation-reduction process - - - 0.00000000005098 73.0
BYD3_k127_3872491_17 PFAM MmgE PrpD - - - 0.0001803 47.0
BYD3_k127_3872491_18 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0002615 48.0
BYD3_k127_3872491_2 oxidation-reduction process K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 363.0
BYD3_k127_3872491_3 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 364.0
BYD3_k127_3872491_4 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 343.0
BYD3_k127_3872491_5 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 332.0
BYD3_k127_3872491_6 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006511 281.0
BYD3_k127_3872491_7 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001431 280.0
BYD3_k127_3872491_8 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001068 272.0
BYD3_k127_3872491_9 Asparaginase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001359 262.0
BYD3_k127_38736_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1463.0
BYD3_k127_38736_1 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008238 541.0
BYD3_k127_38736_2 amino acid transport system, ATPase component K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 413.0
BYD3_k127_38736_3 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008361 395.0
BYD3_k127_38736_4 Copper chaperone PCu(A)C K09796 - - 0.0000000000000000000000000000000000000000000000000001788 189.0
BYD3_k127_38736_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000001273 140.0
BYD3_k127_3887113_0 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000618 282.0
BYD3_k127_3887113_1 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002333 280.0
BYD3_k127_3887113_2 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000000000000002629 234.0
BYD3_k127_3887113_3 - - - - 0.0000000000000000000000000000000000000000004344 169.0
BYD3_k127_3887113_4 - - - - 0.0000000000000000000000000000000000000103 162.0
BYD3_k127_3887113_5 - - - - 0.00000000000000000000000000000000000002052 149.0
BYD3_k127_3887113_6 Beta-lactamase - - - 0.0000000000000000000000000000000001044 135.0
BYD3_k127_3887113_7 - - - - 0.00000000000000000000149 101.0
BYD3_k127_3887113_8 Putative regulatory protein - - - 0.000000000000000000007122 94.0
BYD3_k127_3887113_9 PFAM SMP-30 Gluconolaconase - - - 0.0000000325 59.0
BYD3_k127_3963023_0 SMART alpha amylase catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.0 1457.0
BYD3_k127_3963023_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K11177 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016903,GO:0030151,GO:0033554,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114 1.17.1.4 0.0 1122.0
BYD3_k127_3963023_10 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 342.0
BYD3_k127_3963023_11 LysR family K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 339.0
BYD3_k127_3963023_12 Belongs to the Dps family K04047 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009683 294.0
BYD3_k127_3963023_13 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001267 273.0
BYD3_k127_3963023_14 PFAM Conserved TM helix repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006174 253.0
BYD3_k127_3963023_15 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006306 265.0
BYD3_k127_3963023_16 PFAM regulatory protein LuxR K13041 - - 0.0000000000000000000000000000000000000000000000000000000000000001178 248.0
BYD3_k127_3963023_17 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000003595 234.0
BYD3_k127_3963023_18 Na H antiporter, MnhB K05566 - - 0.000000000000000000000000000000000000000000000000000000000000005507 220.0
BYD3_k127_3963023_19 Na H antiporter, MnhB K05566 - - 0.0000000000000000000000000000000000000000000000000000000002126 215.0
BYD3_k127_3963023_2 Proton-conducting membrane transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 613.0
BYD3_k127_3963023_20 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000002367 211.0
BYD3_k127_3963023_21 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000001762 202.0
BYD3_k127_3963023_22 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000163 191.0
BYD3_k127_3963023_23 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000001558 183.0
BYD3_k127_3963023_24 COG1863 Multisubunit Na H antiporter MnhE subunit K05569 - - 0.00000000000000000000000000000000000000000000001788 176.0
BYD3_k127_3963023_25 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000008967 176.0
BYD3_k127_3963023_26 COG1006 Multisubunit Na H antiporter, MnhC subunit K05567 - - 0.000000000000000000000000000000000000000005939 164.0
BYD3_k127_3963023_27 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000001804 149.0
BYD3_k127_3963023_28 Multiple resistance and pH regulation protein F K05570 - - 0.0000000000000000000000005508 115.0
BYD3_k127_3963023_29 monovalent cation:proton antiporter activity K05571 - - 0.00000000000000000000163 102.0
BYD3_k127_3963023_3 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 524.0
BYD3_k127_3963023_30 YXWGXW repeat (2 copies) - - - 0.000000000000000003093 89.0
BYD3_k127_3963023_31 ThiS family K03636 - - 0.000000000000000003646 86.0
BYD3_k127_3963023_32 Auxin binding protein - - - 0.00000001007 62.0
BYD3_k127_3963023_33 - - - - 0.00000003001 61.0
BYD3_k127_3963023_4 MASE1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 529.0
BYD3_k127_3963023_5 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 468.0
BYD3_k127_3963023_6 divalent heavy-metal cations transporter K07238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 430.0
BYD3_k127_3963023_7 Proline racemase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 399.0
BYD3_k127_3963023_8 Dihydrodipicolinate synthetase family K21062 - 3.5.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007771 388.0
BYD3_k127_3963023_9 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009928 354.0
BYD3_k127_3990940_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 582.0
BYD3_k127_3990940_1 Glucose sorbosone K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 553.0
BYD3_k127_3990940_2 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 520.0
BYD3_k127_3990940_3 Methyltransferase K18911 - 2.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004227 347.0
BYD3_k127_3990940_4 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07666,K07774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 295.0
BYD3_k127_3990940_5 Beta-lactamase enzyme family K07262 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001578 293.0
BYD3_k127_3990940_6 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008536 274.0
BYD3_k127_3990940_7 histidine kinase HAMP region domain protein K07649 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000002226 256.0
BYD3_k127_3990940_8 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000000000000002755 239.0
BYD3_k127_3990940_9 - - - - 0.0000000000000000000000000000000000000000000000000000000001861 212.0
BYD3_k127_399589_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 3.011e-302 931.0
BYD3_k127_399589_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009209 606.0
BYD3_k127_399589_10 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008323 440.0
BYD3_k127_399589_11 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 438.0
BYD3_k127_399589_12 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 424.0
BYD3_k127_399589_13 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 412.0
BYD3_k127_399589_14 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 389.0
BYD3_k127_399589_15 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 374.0
BYD3_k127_399589_16 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 374.0
BYD3_k127_399589_17 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 376.0
BYD3_k127_399589_18 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 352.0
BYD3_k127_399589_19 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 341.0
BYD3_k127_399589_2 PFAM Peptidase M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 557.0
BYD3_k127_399589_20 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 313.0
BYD3_k127_399589_21 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001693 288.0
BYD3_k127_399589_22 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007487 295.0
BYD3_k127_399589_23 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000001273 265.0
BYD3_k127_399589_24 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001851 247.0
BYD3_k127_399589_25 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000007561 245.0
BYD3_k127_399589_26 PFAM Phosphoribosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000004864 236.0
BYD3_k127_399589_27 lactate metabolic process K00113 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0045333,GO:0046872,GO:0048037,GO:0051536,GO:0051540,GO:0055114,GO:0071944 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000006121 241.0
BYD3_k127_399589_28 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000003445 228.0
BYD3_k127_399589_29 oxidase assembly K02258 - - 0.0000000000000000000000000000000000000000000000000000000000000007771 225.0
BYD3_k127_399589_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 550.0
BYD3_k127_399589_30 Involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000000000000000000000000000000005973 234.0
BYD3_k127_399589_31 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000000000005775 209.0
BYD3_k127_399589_32 OsmC-like protein K07397 - - 0.00000000000000000000000000000000000000000000000000000000003304 209.0
BYD3_k127_399589_33 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000004504 213.0
BYD3_k127_399589_34 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.0000000000000000000000000000000000000000000000000000000001186 226.0
BYD3_k127_399589_35 SURF1-like protein K14998 - - 0.0000000000000000000000000000000000000000000000000000000004223 210.0
BYD3_k127_399589_36 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000666 193.0
BYD3_k127_399589_37 Required for insertion of 4Fe-4S clusters K15724 - - 0.00000000000000000000000000000000000000000000000000001221 190.0
BYD3_k127_399589_38 methyltransferase K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000003174 190.0
BYD3_k127_399589_39 signal sequence binding - - - 0.00000000000000000000000000000000000000000000000004613 184.0
BYD3_k127_399589_4 SMART Tetratricopeptide domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 521.0
BYD3_k127_399589_40 Domain of unknown function (DUF4340) - - - 0.0000000000000000000000000000000000000001614 161.0
BYD3_k127_399589_41 Ferredoxin - - - 0.00000000000000000000000000000000000000056 151.0
BYD3_k127_399589_42 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000003653 150.0
BYD3_k127_399589_43 - - - - 0.00000000000000000000000000000009471 136.0
BYD3_k127_399589_44 Integral membrane protein (DUF2244) - - - 0.0000000000000000000001925 102.0
BYD3_k127_399589_46 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.00000000000000000000585 109.0
BYD3_k127_399589_47 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000002093 86.0
BYD3_k127_399589_49 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.00001661 47.0
BYD3_k127_399589_5 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 503.0
BYD3_k127_399589_50 Protein of unknown function (DUF2970) - - - 0.0001439 52.0
BYD3_k127_399589_51 - - - - 0.0002263 45.0
BYD3_k127_399589_6 Peptidase M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007036 478.0
BYD3_k127_399589_7 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 465.0
BYD3_k127_399589_8 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 448.0
BYD3_k127_399589_9 transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 460.0
BYD3_k127_4048056_0 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 2.425e-207 668.0
BYD3_k127_4048056_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 580.0
BYD3_k127_4048056_10 TRAP transporter, solute receptor (TAXI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 356.0
BYD3_k127_4048056_11 COG1994 Zn-dependent proteases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 341.0
BYD3_k127_4048056_12 Probable molybdopterin binding domain K03638,K03831 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 305.0
BYD3_k127_4048056_13 Serine hydrolase (FSH1) K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008033 299.0
BYD3_k127_4048056_14 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 297.0
BYD3_k127_4048056_15 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000002158 240.0
BYD3_k127_4048056_16 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000007784 224.0
BYD3_k127_4048056_17 Lumazine binding domain K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000003513 238.0
BYD3_k127_4048056_18 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000001347 216.0
BYD3_k127_4048056_19 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000003377 233.0
BYD3_k127_4048056_2 modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 585.0
BYD3_k127_4048056_20 cytochrome - - - 0.0000000000000000000000000000000000000000000005316 182.0
BYD3_k127_4048056_21 Belongs to the UPF0307 family K09889 - - 0.0000000000000000000000000000000000000006594 158.0
BYD3_k127_4048056_22 Glutathione S-transferase, C-terminal domain - - - 0.0000000000000000000000000000000005243 152.0
BYD3_k127_4048056_23 - - - - 0.000000000000000000000000003029 125.0
BYD3_k127_4048056_3 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 576.0
BYD3_k127_4048056_4 Fumarylacetoacetase K01555 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007283 565.0
BYD3_k127_4048056_5 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 485.0
BYD3_k127_4048056_6 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 497.0
BYD3_k127_4048056_7 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004774 459.0
BYD3_k127_4048056_8 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 419.0
BYD3_k127_4048056_9 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 362.0
BYD3_k127_4160985_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 4.613e-312 985.0
BYD3_k127_4160985_1 fumarate hydratase activity K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004064 269.0
BYD3_k127_4174871_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1489.0
BYD3_k127_4174871_1 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 577.0
BYD3_k127_4174871_2 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 504.0
BYD3_k127_4174871_3 Memo-like protein K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 310.0
BYD3_k127_4174871_4 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 291.0
BYD3_k127_4174871_5 - - - - 0.00000000000000000000000000000001653 136.0
BYD3_k127_4210306_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 7.066e-204 645.0
BYD3_k127_4210306_1 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 560.0
BYD3_k127_4210306_2 cobalamin synthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 344.0
BYD3_k127_4210306_3 Imidazolonepropionase and related amidohydrolases - - - 0.00004721 48.0
BYD3_k127_4228117_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 470.0
BYD3_k127_4228117_1 Belongs to the methyltransferase superfamily K07444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 452.0
BYD3_k127_4228117_2 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004861 269.0
BYD3_k127_4228117_3 Type II/IV secretion system protein K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000001236 237.0
BYD3_k127_4228117_4 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000001115 237.0
BYD3_k127_4228117_5 Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000000000000000000000003989 228.0
BYD3_k127_4228117_6 PIN domain - - - 0.000000000000000000000000000000000000206 144.0
BYD3_k127_4228117_7 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000504 147.0
BYD3_k127_4228117_8 HIRAN - - - 0.00000000000000000000000000002041 127.0
BYD3_k127_4228117_9 positive regulation of growth - - - 0.00000004765 57.0
BYD3_k127_4241104_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 3.951e-200 634.0
BYD3_k127_4241104_1 CoA-transferase family III K18289 - 2.8.3.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 517.0
BYD3_k127_4241104_2 Enoyl-CoA hydratase - - - 0.000000000000000000000000000000000000000000000000000114 189.0
BYD3_k127_4241104_3 SWI complex, BAF60b domains - - - 0.00000000000000000000000000000000032 135.0
BYD3_k127_4241104_5 Forkhead associated domain - - - 0.00000003261 65.0
BYD3_k127_4241104_6 Transposase - - - 0.00000004329 65.0
BYD3_k127_4293644_0 dna topoisomerase III K03169 - 5.99.1.2 0.0 1142.0
BYD3_k127_4293644_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.962e-281 874.0
BYD3_k127_4293644_10 Cysteine-rich motif following a subset of SET domains K07117 - - 0.000000000000000000000000000000000000000000002945 171.0
BYD3_k127_4293644_11 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000000000000000000001795 123.0
BYD3_k127_4293644_2 Histidine kinase - - - 9.891e-211 685.0
BYD3_k127_4293644_3 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004741 547.0
BYD3_k127_4293644_4 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 450.0
BYD3_k127_4293644_5 PFAM Peptidoglycan-binding LysM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 354.0
BYD3_k127_4293644_6 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 352.0
BYD3_k127_4293644_7 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 350.0
BYD3_k127_4293644_8 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000007067 234.0
BYD3_k127_4293644_9 Domain of unknown function (DUF4390) - - - 0.0000000000000000000000000000000000000000000000003026 187.0
BYD3_k127_4297807_0 TIGRFAM cytochrome c-type biogenesis protein CcmF K02198 - - 1.149e-285 892.0
BYD3_k127_4297807_1 Tetratricopeptide repeat K02200 - - 0.00000000000000000000000000000000000000000000000000000000000000000003429 248.0
BYD3_k127_4297807_2 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000002036 233.0
BYD3_k127_4297807_3 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000001235 193.0
BYD3_k127_4297807_4 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000001733 157.0
BYD3_k127_4297807_5 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000001998 150.0
BYD3_k127_4305312_0 thiamine-containing compound biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 535.0
BYD3_k127_4305312_1 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 380.0
BYD3_k127_4305312_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K08318 - 1.1.1.373,1.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 354.0
BYD3_k127_4305312_3 Pfam Sulfatase - - - 0.000000001412 61.0
BYD3_k127_4323932_0 Nuclease-related domain - - - 3.398e-225 711.0
BYD3_k127_4323932_1 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 3.387e-196 619.0
BYD3_k127_4323932_2 COG0044 Dihydroorotase and related cyclic amidohydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003321 614.0
BYD3_k127_4323932_3 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008308 557.0
BYD3_k127_4323932_4 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 504.0
BYD3_k127_4323932_5 Asp/Glu/Hydantoin racemase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007448 306.0
BYD3_k127_4323932_6 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000008931 205.0
BYD3_k127_4368801_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 472.0
BYD3_k127_4368801_1 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009257 450.0
BYD3_k127_4368801_10 PFAM Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000001092 134.0
BYD3_k127_4368801_11 Cupin domain - - - 0.0000000000009567 82.0
BYD3_k127_4368801_12 - - - - 0.000000002131 61.0
BYD3_k127_4368801_13 - - - - 0.000000005892 62.0
BYD3_k127_4368801_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 303.0
BYD3_k127_4368801_3 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 295.0
BYD3_k127_4368801_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 297.0
BYD3_k127_4368801_5 Extra-cytoplasmic solute receptor family protein 139 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003331 264.0
BYD3_k127_4368801_6 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008012 256.0
BYD3_k127_4368801_7 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001056 246.0
BYD3_k127_4368801_8 cell redox homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000002259 239.0
BYD3_k127_4368801_9 NIPSNAP - - - 0.0000000000000000000000000000000003906 141.0
BYD3_k127_4391425_0 Trypsin K04771,K04772 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005402 552.0
BYD3_k127_4391425_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004238 398.0
BYD3_k127_4391425_10 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000000000000000000000000000000000000000000000005965 192.0
BYD3_k127_4391425_11 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000253 194.0
BYD3_k127_4391425_12 Universal stress protein - - - 0.00000000000000000000000000000000000002086 150.0
BYD3_k127_4391425_13 Endoribonuclease L-PSP - - - 0.000000000000000000000000000005512 128.0
BYD3_k127_4391425_14 M61 glycyl aminopeptidase - - - 0.00000000000000000000000007778 111.0
BYD3_k127_4391425_15 Hemerythrin HHE cation binding - - - 0.000000000000000000000002146 109.0
BYD3_k127_4391425_16 Hemerythrin HHE cation binding domain K01996 - - 0.000000001291 61.0
BYD3_k127_4391425_17 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.00000008619 54.0
BYD3_k127_4391425_2 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 330.0
BYD3_k127_4391425_3 PFAM metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007951 283.0
BYD3_k127_4391425_4 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003964 286.0
BYD3_k127_4391425_5 Domain of unknown function DUF108 K06989 - 1.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000006129 254.0
BYD3_k127_4391425_6 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000000000000000009388 213.0
BYD3_k127_4391425_7 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000007387 214.0
BYD3_k127_4391425_8 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000007819 211.0
BYD3_k127_4391425_9 PFAM Metal-dependent hydrolase HDOD - - - 0.00000000000000000000000000000000000000000000000000000003778 207.0
BYD3_k127_4406172_0 Bacterial protein of unknown function (DUF853) K06915 - - 1.711e-207 656.0
BYD3_k127_4406172_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007834 541.0
BYD3_k127_4406172_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008914 433.0
BYD3_k127_4406172_3 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 407.0
BYD3_k127_4406172_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000153 260.0
BYD3_k127_4406172_5 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000003856 258.0
BYD3_k127_4406172_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000004112 258.0
BYD3_k127_4406172_7 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000005409 229.0
BYD3_k127_4406172_8 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000001045 236.0
BYD3_k127_4406172_9 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000007966 152.0
BYD3_k127_4408092_0 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989 585.0
BYD3_k127_4408092_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000002349 216.0
BYD3_k127_4408092_2 Translation elongation factor K03833 GO:0000049,GO:0000166,GO:0001514,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006412,GO:0006414,GO:0006417,GO:0006451,GO:0006518,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009069,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016259,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031326,GO:0032268,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034248,GO:0034641,GO:0034645,GO:0035368,GO:0035639,GO:0036094,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:2000112 - 0.00000000000000000000000000000807 128.0
BYD3_k127_4443492_0 GcpE protein K03526 - 1.17.7.1,1.17.7.3 1.604e-194 615.0
BYD3_k127_4443492_1 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009858 567.0
BYD3_k127_4443492_10 Type IV pilus biogenesis stability protein PilW K02656 - - 0.000000000000000000000000000000000000000000000000000000000000000003051 251.0
BYD3_k127_4443492_11 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000001877 187.0
BYD3_k127_4443492_12 Transcriptional regulator K15539 - - 0.00000000000000000000000000000000000002844 160.0
BYD3_k127_4443492_13 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000000000000000000003458 141.0
BYD3_k127_4443492_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 542.0
BYD3_k127_4443492_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 486.0
BYD3_k127_4443492_4 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 484.0
BYD3_k127_4443492_5 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 456.0
BYD3_k127_4443492_6 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 445.0
BYD3_k127_4443492_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 369.0
BYD3_k127_4443492_8 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 320.0
BYD3_k127_4443492_9 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000006254 241.0
BYD3_k127_4505383_0 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 517.0
BYD3_k127_4505383_1 N-methylhydantoinase B acetone carboxylase alpha subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000878 259.0
BYD3_k127_4505383_2 - - - - 0.00000000000000000003632 94.0
BYD3_k127_4515522_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 580.0
BYD3_k127_4515522_1 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 546.0
BYD3_k127_4515522_10 protein conserved in bacteria - - - 0.000000000000000000000000000000000000001031 161.0
BYD3_k127_4515522_11 Protein of unknown function (DUF2877) - - - 0.000000000000000000000000000008413 132.0
BYD3_k127_4515522_12 PFAM Ankyrin K10799 - 2.4.2.30 0.00000007644 64.0
BYD3_k127_4515522_13 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000973 53.0
BYD3_k127_4515522_14 - - - - 0.0001471 52.0
BYD3_k127_4515522_2 Protein of unknown function (DUF1116) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 502.0
BYD3_k127_4515522_3 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 504.0
BYD3_k127_4515522_4 CoA binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 485.0
BYD3_k127_4515522_5 Belongs to the carbamate kinase family K00926 - 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005729 419.0
BYD3_k127_4515522_6 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 330.0
BYD3_k127_4515522_7 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 316.0
BYD3_k127_4515522_8 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 306.0
BYD3_k127_4515522_9 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000007469 182.0
BYD3_k127_4519648_0 Belongs to the enoyl-CoA hydratase isomerase family K07516 - 1.1.1.35 1.274e-302 948.0
BYD3_k127_4519648_1 Gamma-glutamyltranspeptidase - - - 1.057e-222 704.0
BYD3_k127_4519648_10 4-phosphoerythronate dehydrogenase activity K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 344.0
BYD3_k127_4519648_11 oxidation-reduction process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005358 311.0
BYD3_k127_4519648_12 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 316.0
BYD3_k127_4519648_13 Argininosuccinate lyase C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 310.0
BYD3_k127_4519648_14 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 302.0
BYD3_k127_4519648_15 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 302.0
BYD3_k127_4519648_16 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 304.0
BYD3_k127_4519648_17 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 323.0
BYD3_k127_4519648_18 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001651 274.0
BYD3_k127_4519648_19 metal-dependent enzyme of the double-stranded beta helix superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000007869 230.0
BYD3_k127_4519648_2 FAD dependent oxidoreductase - - - 3.191e-194 617.0
BYD3_k127_4519648_20 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000006069 231.0
BYD3_k127_4519648_21 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000001791 224.0
BYD3_k127_4519648_22 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000000000000004866 214.0
BYD3_k127_4519648_23 Belongs to the DapA family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000004235 208.0
BYD3_k127_4519648_24 ABC transporter substrate-binding protein K02020,K22003 - 5.3.3.7 0.000000000000000000000000000000000000000000000006183 181.0
BYD3_k127_4519648_25 glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000002579 149.0
BYD3_k127_4519648_26 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000001747 149.0
BYD3_k127_4519648_27 Protein of unknown function (DUF3568) - - - 0.0000000000000000000000002451 113.0
BYD3_k127_4519648_28 - - - - 0.00000000000000000000007705 113.0
BYD3_k127_4519648_29 Clan AA aspartic protease, AF_0612 family - - - 0.00000000007693 63.0
BYD3_k127_4519648_3 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 533.0
BYD3_k127_4519648_30 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K16792 - 4.2.1.114 0.0000000001295 70.0
BYD3_k127_4519648_31 Tripartite tricarboxylate transporter family receptor - - - 0.0000005956 57.0
BYD3_k127_4519648_4 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007857 517.0
BYD3_k127_4519648_5 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008537 495.0
BYD3_k127_4519648_6 mandelate racemase muconate lactonizing - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004784 504.0
BYD3_k127_4519648_7 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 490.0
BYD3_k127_4519648_8 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 427.0
BYD3_k127_4519648_9 MmgE PrpD family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004718 404.0
BYD3_k127_4531134_0 CoA-transferase family III K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007947 400.0
BYD3_k127_4531134_1 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 359.0
BYD3_k127_4531134_2 Luciferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000003552 233.0
BYD3_k127_4531134_3 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000006391 243.0
BYD3_k127_4583777_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 1.098e-223 703.0
BYD3_k127_4583777_1 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 503.0
BYD3_k127_4583777_10 TIGRFAM exopolysaccharide biosynthesis operon protein EpsL - - - 0.0000000000000000000000000000000000000245 158.0
BYD3_k127_4583777_11 PFAM aldo keto reductase - - - 0.00000000000000000000004688 100.0
BYD3_k127_4583777_12 - - - - 0.0000000000000004786 83.0
BYD3_k127_4583777_2 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 418.0
BYD3_k127_4583777_3 MmgE/PrpD family K01720 - 4.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 421.0
BYD3_k127_4583777_4 acyl-CoA transferases carnitine dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006538 414.0
BYD3_k127_4583777_5 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008449 368.0
BYD3_k127_4583777_6 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 326.0
BYD3_k127_4583777_7 Enoyl-CoA hydratase isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 330.0
BYD3_k127_4583777_8 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 319.0
BYD3_k127_4583777_9 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000003703 230.0
BYD3_k127_4615749_0 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 4.197e-261 823.0
BYD3_k127_4615749_1 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 3.541e-221 723.0
BYD3_k127_4615749_2 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009311 483.0
BYD3_k127_4615749_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005278 389.0
BYD3_k127_4615749_4 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 362.0
BYD3_k127_4615749_5 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008867 359.0
BYD3_k127_4729378_0 Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 577.0
BYD3_k127_4729378_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 544.0
BYD3_k127_4729378_10 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362,K05297 - 1.18.1.1,1.7.1.15 0.000000000000000000001659 97.0
BYD3_k127_4729378_11 BFD-like [2Fe-2S] binding domain K00362 - 1.7.1.15 0.000000001569 72.0
BYD3_k127_4729378_2 PFAM cytochrome c oxidase subunit I K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 491.0
BYD3_k127_4729378_3 Chitin synthase K14666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 441.0
BYD3_k127_4729378_4 Asparaginase K13051 - 3.4.19.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 293.0
BYD3_k127_4729378_5 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000009869 240.0
BYD3_k127_4729378_6 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000005545 248.0
BYD3_k127_4729378_7 Electron transporter SenC - - - 0.000000000000000000000000000000000000000006519 176.0
BYD3_k127_4729378_8 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.0000000000000000000000000000000000001799 147.0
BYD3_k127_4729378_9 - - - - 0.00000000000000000000000001289 118.0
BYD3_k127_4751556_0 Chromate K07240 - - 3.743e-212 667.0
BYD3_k127_4751556_1 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 515.0
BYD3_k127_4751556_2 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 481.0
BYD3_k127_4751556_3 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001636 230.0
BYD3_k127_4751556_4 Cupin domain K14673 - - 0.0000000000000000000000000000002651 130.0
BYD3_k127_4751944_0 aconitate hydratase - - - 0.0 1116.0
BYD3_k127_4751944_1 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K03852 - 2.3.3.15 4.777e-274 856.0
BYD3_k127_4751944_10 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 348.0
BYD3_k127_4751944_11 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 325.0
BYD3_k127_4751944_12 Iron-containing alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007467 328.0
BYD3_k127_4751944_13 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 305.0
BYD3_k127_4751944_14 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 293.0
BYD3_k127_4751944_15 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001727 297.0
BYD3_k127_4751944_16 TIGRFAM F420-dependent oxidoreductase K12234 - 6.3.2.31,6.3.2.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000002242 270.0
BYD3_k127_4751944_17 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000005217 262.0
BYD3_k127_4751944_18 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000001309 244.0
BYD3_k127_4751944_19 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000007123 206.0
BYD3_k127_4751944_2 glutamine synthetase K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 2.854e-250 776.0
BYD3_k127_4751944_20 Trypsin - - - 0.0000000000000000000000000000000000000000000000006692 191.0
BYD3_k127_4751944_21 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000001149 180.0
BYD3_k127_4751944_22 Domain of unknown function (DUF427) - - - 0.00000000000000000000000000000000000000001895 155.0
BYD3_k127_4751944_23 Domain of unknown function (DUF4124) - - - 0.00000000000000000000000000000003223 131.0
BYD3_k127_4751944_24 LytTr DNA-binding domain K08083 - - 0.0000000000000000000000000000004147 124.0
BYD3_k127_4751944_25 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 - 2.7.7.68 0.000000000000000005673 93.0
BYD3_k127_4751944_26 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000005954 74.0
BYD3_k127_4751944_3 Nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 1.632e-217 684.0
BYD3_k127_4751944_4 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 7.338e-209 658.0
BYD3_k127_4751944_5 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 451.0
BYD3_k127_4751944_6 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 442.0
BYD3_k127_4751944_7 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 397.0
BYD3_k127_4751944_8 PFAM ATP-binding region ATPase domain protein K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 396.0
BYD3_k127_4751944_9 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009985 379.0
BYD3_k127_4779125_0 Amidase - - - 2.341e-224 706.0
BYD3_k127_4779125_1 Sodium hydrogen exchanger K11105 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 584.0
BYD3_k127_4779125_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003603 260.0
BYD3_k127_4779125_3 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000001415 243.0
BYD3_k127_4779125_4 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000000001909 240.0
BYD3_k127_4779125_5 TIGRFAM 2-hydroxy-3-oxopropionate reductase K00042 - 1.1.1.60 0.0000000000000000000000000000000000000000001766 171.0
BYD3_k127_4779125_6 Oxidoreductase family, C-terminal alpha/beta domain K19181 - 1.1.1.292 0.000000000000000000000000000000000003137 150.0
BYD3_k127_4779125_7 COG NOG19114 non supervised orthologous group - - - 0.0000006305 55.0
BYD3_k127_4796208_0 diguanylate cyclase K13590 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 465.0
BYD3_k127_4796208_1 Histidine kinase K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 449.0
BYD3_k127_4796208_2 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008642 420.0
BYD3_k127_4796208_3 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 295.0
BYD3_k127_4796208_4 GGDEF domain K13590 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000002176 213.0
BYD3_k127_4796208_5 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.0000000000000000000000000000000000000000000000002428 179.0
BYD3_k127_4796208_6 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.0000000000000000000001128 101.0
BYD3_k127_4796208_7 FlaG protein K06603 - - 0.000000003258 63.0
BYD3_k127_4826115_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0 1247.0
BYD3_k127_4826115_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 4.881e-247 781.0
BYD3_k127_4826115_10 AAA domain (dynein-related subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 425.0
BYD3_k127_4826115_11 VWA domain containing CoxE-like protein K07161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006224 417.0
BYD3_k127_4826115_12 pilus assembly protein FimV K08086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007879 388.0
BYD3_k127_4826115_13 repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007757 376.0
BYD3_k127_4826115_14 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 315.0
BYD3_k127_4826115_15 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009918 324.0
BYD3_k127_4826115_16 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009412 267.0
BYD3_k127_4826115_17 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000001263 265.0
BYD3_k127_4826115_18 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000002588 265.0
BYD3_k127_4826115_19 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000004397 245.0
BYD3_k127_4826115_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 4.822e-219 687.0
BYD3_k127_4826115_20 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000001286 240.0
BYD3_k127_4826115_21 Glutathione S-Transferase K00799 GO:0003674,GO:0003824,GO:0004364,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016740,GO:0016765,GO:0030611,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0055114 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000008831 248.0
BYD3_k127_4826115_22 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000003073 224.0
BYD3_k127_4826115_23 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000006971 195.0
BYD3_k127_4826115_24 Belongs to the mandelate racemase muconate lactonizing enzyme family K20023 - 4.2.1.156,4.2.1.42 0.00000000000000000000000000000000000000000000000000001529 203.0
BYD3_k127_4826115_25 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA - - - 0.0000000000000000000000000000000000000000000000004056 184.0
BYD3_k127_4826115_26 carbon monoxide dehydrogenase K09386 - - 0.0000000000000000000000000000000000000000000000005581 188.0
BYD3_k127_4826115_27 PFAM Colicin V production protein K03558 - - 0.0000000000000000000000000000000000000000004642 164.0
BYD3_k127_4826115_28 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000004546 160.0
BYD3_k127_4826115_29 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000000148 164.0
BYD3_k127_4826115_3 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 6.45e-211 661.0
BYD3_k127_4826115_30 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000008465 153.0
BYD3_k127_4826115_31 Sporulation related domain K03749 - - 0.00000000000000000000000000003124 126.0
BYD3_k127_4826115_32 Macrocin-O-methyltransferase (TylF) K05303 - - 0.0000000000000000000000000001329 126.0
BYD3_k127_4826115_33 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000003797 97.0
BYD3_k127_4826115_4 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 580.0
BYD3_k127_4826115_5 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 534.0
BYD3_k127_4826115_6 Na dependent nucleoside transporter K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 518.0
BYD3_k127_4826115_7 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 506.0
BYD3_k127_4826115_8 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008539 460.0
BYD3_k127_4826115_9 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 434.0
BYD3_k127_4838314_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 593.0
BYD3_k127_4838314_1 DNA Topoisomerase K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006609 352.0
BYD3_k127_4838314_2 PFAM ABC transporter related K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 332.0
BYD3_k127_4838314_3 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007473 271.0
BYD3_k127_4838314_4 PFAM Mammalian cell entry related domain protein K06192 - - 0.0000000000000000000000000000000000000000003338 171.0
BYD3_k127_4838314_5 ABC-type transport auxiliary lipoprotein component K09857 - - 0.000000000000000000000002979 114.0
BYD3_k127_4838314_6 bacterial OsmY and nodulation domain K04065 - - 0.0000000000000000000002867 99.0
BYD3_k127_4893458_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 7.655e-224 708.0
BYD3_k127_4893458_1 transglycosylase K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 443.0
BYD3_k127_4893458_2 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006097 274.0
BYD3_k127_4908774_0 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 545.0
BYD3_k127_4908774_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004617 285.0
BYD3_k127_4908774_10 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000003152 99.0
BYD3_k127_4908774_11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000001218 74.0
BYD3_k127_4908774_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005517 282.0
BYD3_k127_4908774_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002307 259.0
BYD3_k127_4908774_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007814 268.0
BYD3_k127_4908774_5 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000003724 227.0
BYD3_k127_4908774_6 PFAM class II aldolase adducin family protein - - - 0.000000000000000000000000000000000000000000000000005383 197.0
BYD3_k127_4908774_7 Catalyzes the transfer of a methyl group to L- homocysteine resulting in methionine formation. The physiological methyl donor is K00549 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003871,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0032259,GO:0042084,GO:0042085,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050667,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.14 0.00000000000000000000000000000000000000000002765 183.0
BYD3_k127_4908774_8 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000001313 132.0
BYD3_k127_4908774_9 CHRD domain - - - 0.000000000000000000000000000000058 134.0
BYD3_k127_4909661_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 499.0
BYD3_k127_4909661_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0090304,GO:0097056,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 504.0
BYD3_k127_4909661_2 Translation elongation factor K03833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009181 432.0
BYD3_k127_4909661_3 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 384.0
BYD3_k127_4909661_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000423 396.0
BYD3_k127_4909661_5 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000003619 189.0
BYD3_k127_4909661_6 Cupin domain K14673 - - 0.00000000000000000000000000000009769 133.0
BYD3_k127_4914510_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004363 293.0
BYD3_k127_4914510_1 lipoprotein transporter activity K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003936 250.0
BYD3_k127_4914510_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000002502 159.0
BYD3_k127_4914510_3 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000000000004756 127.0
BYD3_k127_4919333_0 nitrite reductase NAD(P)H K00362 - 1.7.1.15 0.0 1289.0
BYD3_k127_4919333_1 Saccharopine dehydrogenase C-terminal domain K00808 - 2.5.1.44 3.695e-207 655.0
BYD3_k127_4919333_10 - - - - 0.000000001481 62.0
BYD3_k127_4919333_2 COG1012 NAD-dependent aldehyde dehydrogenases K04072,K13922 - 1.1.1.1,1.2.1.10,1.2.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 559.0
BYD3_k127_4919333_3 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 520.0
BYD3_k127_4919333_4 COG2951 Membrane-bound lytic murein transglycosylase B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 511.0
BYD3_k127_4919333_5 Capsule synthesis protein K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 320.0
BYD3_k127_4919333_6 Tetrapyrrole (Corrin/Porphyrin) Methylases K02303 - 2.1.1.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007225 271.0
BYD3_k127_4919333_7 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002832 261.0
BYD3_k127_4919333_8 Rieske-like [2Fe-2S] domain K00363 - 1.7.1.15 0.00000000000000000000000000000000000008716 151.0
BYD3_k127_4919333_9 tellurite resistance protein - - - 0.00000000004487 65.0
BYD3_k127_4962336_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520,K21739 - 1.16.1.1 2.703e-208 666.0
BYD3_k127_4962336_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 348.0
BYD3_k127_4962336_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 324.0
BYD3_k127_4962336_3 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005933 303.0
BYD3_k127_4962336_4 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000669 197.0
BYD3_k127_4962336_5 - - - - 0.0000000000000002545 83.0
BYD3_k127_4972440_0 Alanine-glyoxylate amino-transferase K00375,K05825 - - 1.088e-194 633.0
BYD3_k127_4972440_1 fatty acid alpha-oxidation K12261 GO:0001561,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015031,GO:0015833,GO:0016042,GO:0016043,GO:0016054,GO:0016829,GO:0016830,GO:0019395,GO:0019752,GO:0019842,GO:0022607,GO:0030258,GO:0030976,GO:0031907,GO:0031974,GO:0032787,GO:0033036,GO:0033365,GO:0034440,GO:0034613,GO:0036094,GO:0042579,GO:0042802,GO:0042886,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046395,GO:0046907,GO:0048037,GO:0050662,GO:0051179,GO:0051234,GO:0051259,GO:0051641,GO:0051649,GO:0055114,GO:0065003,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:0097159,GO:1901363,GO:1901575,GO:1901681 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 567.0
BYD3_k127_4972440_10 LysR family - - - 0.00000000000000000000000000000000000000000000000000000000009886 217.0
BYD3_k127_4972440_11 decarboxylase K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000000001317 204.0
BYD3_k127_4972440_12 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.000000000000000000000000000000000000001558 157.0
BYD3_k127_4972440_13 AraC-like ligand binding domain - - - 0.000000001591 65.0
BYD3_k127_4972440_14 His Kinase A (phosphoacceptor) domain - - - 0.000000002985 57.0
BYD3_k127_4972440_15 Glucose-6-phosphate isomerase (GPI) K06859 - 5.3.1.9 0.0002323 49.0
BYD3_k127_4972440_2 COG3653 N-acyl-D-aspartate D-glutamate deacylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007758 542.0
BYD3_k127_4972440_3 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008992 452.0
BYD3_k127_4972440_4 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 351.0
BYD3_k127_4972440_5 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 321.0
BYD3_k127_4972440_6 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000796 317.0
BYD3_k127_4972440_7 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009175 275.0
BYD3_k127_4972440_8 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000002539 246.0
BYD3_k127_4972440_9 F420H(2)-dependent quinone reductase - - - 0.0000000000000000000000000000000000000000000000000000000000001414 215.0
BYD3_k127_4977805_0 - - - - 1.133e-293 917.0
BYD3_k127_4977805_1 2-methylcitrate dehydratase activity K01720 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019679,GO:0019752,GO:0030312,GO:0032787,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046459,GO:0047547,GO:0050896,GO:0071704,GO:0071944,GO:0072329,GO:1901575 4.2.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 349.0
BYD3_k127_4979729_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004513 428.0
BYD3_k127_4979729_1 Peptidogalycan biosysnthesis/recognition - - - 0.0000000000000000000000000000000000000000000000006457 185.0
BYD3_k127_508462_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009708 337.0
BYD3_k127_508462_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 310.0
BYD3_k127_508462_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 297.0
BYD3_k127_508462_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004937 290.0
BYD3_k127_508462_4 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007938 282.0
BYD3_k127_508462_5 TIGRFAM periplasmic protein thiol K02199 - - 0.00000000000000000000000000000000000000000000000000000000000000000003606 235.0
BYD3_k127_508462_6 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000002652 176.0
BYD3_k127_508462_7 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000006214 120.0
BYD3_k127_513593_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1318.0
BYD3_k127_513895_0 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004351 438.0
BYD3_k127_513895_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001013 284.0
BYD3_k127_5142131_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 372.0
BYD3_k127_5142131_1 proline dipeptidase activity K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 321.0
BYD3_k127_5142131_2 2-dehydropantoate 2-reductase K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000008646 231.0
BYD3_k127_5142131_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000002492 121.0
BYD3_k127_5151482_0 PFAM monooxygenase FAD-binding K05712 - 1.14.13.127 4.863e-230 725.0
BYD3_k127_5151482_1 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 2.089e-201 633.0
BYD3_k127_5151482_10 Acyl-CoA dehydrogenase, C-terminal domain K22027 - 1.14.13.235 0.0000000000000000000000000000000000000000000000000000000000000000002673 245.0
BYD3_k127_5151482_11 Protein of unknown function (DUF3025) - - - 0.0000000000000000000000000000000000000000000000000000000000004643 224.0
BYD3_k127_5151482_12 YCII-related domain - - - 0.00000000000000000000000000000000000000001988 164.0
BYD3_k127_5151482_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 601.0
BYD3_k127_5151482_3 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 473.0
BYD3_k127_5151482_4 Taurine catabolism dioxygenase TauD, TfdA family K22303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 442.0
BYD3_k127_5151482_5 Taurine catabolism dioxygenase TauD, TfdA family K22303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 371.0
BYD3_k127_5151482_6 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 346.0
BYD3_k127_5151482_7 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 312.0
BYD3_k127_5151482_8 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002153 263.0
BYD3_k127_5151482_9 Glyoxalase-like domain K04750 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009774 250.0
BYD3_k127_5154668_0 Protein export membrane protein K18902 - - 3.273e-280 896.0
BYD3_k127_5154668_1 Protein export membrane protein K18902 - - 1.671e-235 735.0
BYD3_k127_5154668_10 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000004015 212.0
BYD3_k127_5154668_11 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000006944 201.0
BYD3_k127_5154668_12 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000002031 194.0
BYD3_k127_5154668_13 ChrR Cupin-like domain K05913 - 1.13.11.41 0.0000000000000000000000000000000000000000000000001852 180.0
BYD3_k127_5154668_14 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000357 98.0
BYD3_k127_5154668_2 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 498.0
BYD3_k127_5154668_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 462.0
BYD3_k127_5154668_4 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 385.0
BYD3_k127_5154668_5 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 361.0
BYD3_k127_5154668_6 Outer membrane efflux protein K18903 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004448 371.0
BYD3_k127_5154668_7 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002385 256.0
BYD3_k127_5154668_8 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000002556 234.0
BYD3_k127_5154668_9 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000004326 213.0
BYD3_k127_5167097_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 5.266e-208 677.0
BYD3_k127_5167097_1 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01760 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 442.0
BYD3_k127_5167097_2 cobalamin synthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 347.0
BYD3_k127_5167097_3 FAD binding domain K13796 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 308.0
BYD3_k127_5167097_4 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009272 295.0
BYD3_k127_5167097_5 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000001651 228.0
BYD3_k127_5167097_6 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000007156 180.0
BYD3_k127_5201993_0 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000001383 224.0
BYD3_k127_5201993_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000008104 177.0
BYD3_k127_5201993_2 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000000000001992 155.0
BYD3_k127_5201993_3 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000009036 125.0
BYD3_k127_5202430_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007069 586.0
BYD3_k127_5202430_1 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001778 282.0
BYD3_k127_5202430_2 PFAM Enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000001995 204.0
BYD3_k127_5202430_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000003712 191.0
BYD3_k127_5202430_4 MmgE/PrpD family - - - 0.00000000000000000000000000000000000002028 156.0
BYD3_k127_5202430_5 taurine catabolism dioxygenase K03119,K06912 - 1.14.11.17 0.000000000000000000000000000000000002271 143.0
BYD3_k127_5202430_6 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000000000000001119 109.0
BYD3_k127_5205050_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 1.291e-253 792.0
BYD3_k127_5205050_1 PFAM Ethanolamine ammonia lyase large subunit K03735 - 4.3.1.7 1.196e-207 659.0
BYD3_k127_5205050_10 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001349 237.0
BYD3_k127_5205050_11 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000000000000001701 211.0
BYD3_k127_5205050_12 acetylesterase activity K01046 - 3.1.1.3 0.00000000000000000000000000000000000000000000000000002466 198.0
BYD3_k127_5205050_13 - - - - 0.00000000000000000000000000000000000000000000003274 176.0
BYD3_k127_5205050_14 Conserved hypothetical protein (Lin0512_fam) - - - 0.00000000000000000000000000000000000000000000003392 171.0
BYD3_k127_5205050_15 Conserved hypothetical protein (Lin0512_fam) - - - 0.00000000000000000000000000000000000000000000008529 171.0
BYD3_k127_5205050_16 Cupin domain - - - 0.00000000000000000000000000000000000002884 149.0
BYD3_k127_5205050_17 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000003617 116.0
BYD3_k127_5205050_18 Protein of unknown function (DUF2905) - - - 0.00000000000000000000492 93.0
BYD3_k127_5205050_19 PFAM Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00000003682 66.0
BYD3_k127_5205050_2 FAD dependent oxidoreductase K13796 - - 6.822e-196 624.0
BYD3_k127_5205050_20 OsmC-like protein - - - 0.0000001347 57.0
BYD3_k127_5205050_3 L-carnitine dehydratase bile acid-inducible protein F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 454.0
BYD3_k127_5205050_4 beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005685 373.0
BYD3_k127_5205050_5 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 312.0
BYD3_k127_5205050_6 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 298.0
BYD3_k127_5205050_7 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 290.0
BYD3_k127_5205050_8 PFAM Taurine catabolism dioxygenase TauD, TfdA family K06912 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000034 281.0
BYD3_k127_5205050_9 Belongs to the EutC family K03736 - 4.3.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000002091 276.0
BYD3_k127_5208287_0 Peptidase family M41 K03798 - - 1.32e-276 861.0
BYD3_k127_5208287_1 protease with the C-terminal PDZ domain - - - 1.131e-201 640.0
BYD3_k127_5208287_10 - - - - 0.000000000000000000000002302 113.0
BYD3_k127_5208287_11 Protein of unknown function (DUF2726) - - - 0.000001376 57.0
BYD3_k127_5208287_2 PFAM ABC transporter K02471 - - 9.337e-195 627.0
BYD3_k127_5208287_3 Aminotransferase K14287 - 2.6.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 464.0
BYD3_k127_5208287_4 BT1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007594 351.0
BYD3_k127_5208287_5 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 344.0
BYD3_k127_5208287_6 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001577 304.0
BYD3_k127_5208287_7 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.0000000000000000000000000000000000000000000000000008223 198.0
BYD3_k127_5208287_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000037 186.0
BYD3_k127_5208287_9 - - - - 0.000000000000000000000000004803 112.0
BYD3_k127_5304312_0 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 319.0
BYD3_k127_5304312_1 Sir2 family K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005428 300.0
BYD3_k127_5304312_2 Glutathione S-transferase, C-terminal domain K07393 GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016491,GO:0016667,GO:0016672,GO:0016740,GO:0016765,GO:0042221,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.8.5.7 0.00000000000000000006856 89.0
BYD3_k127_5381651_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0 1120.0
BYD3_k127_5381651_1 Phosphate acyltransferases - - - 2.944e-294 933.0
BYD3_k127_5381651_10 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000001712 179.0
BYD3_k127_5381651_11 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.0000000000000000000000000000000000000000008074 160.0
BYD3_k127_5381651_12 Sulphur oxidation protein SoxZ K17227 - - 0.0000000000000000000000000000000002757 142.0
BYD3_k127_5381651_14 Periplasmic Protein - - - 0.00000000000009751 79.0
BYD3_k127_5381651_15 - - - - 0.0000000001263 66.0
BYD3_k127_5381651_2 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005305 546.0
BYD3_k127_5381651_3 PFAM Type II secretion system protein E - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 459.0
BYD3_k127_5381651_4 PFAM Type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008537 429.0
BYD3_k127_5381651_5 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007493 423.0
BYD3_k127_5381651_6 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000001956 252.0
BYD3_k127_5381651_7 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000007374 251.0
BYD3_k127_5381651_8 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002316 250.0
BYD3_k127_5381651_9 Protein phosphatase 2C - - - 0.00000000000000000000000000000000000000000000000000000002154 210.0
BYD3_k127_5383377_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006562 582.0
BYD3_k127_5383377_1 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 367.0
BYD3_k127_5383377_2 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006488 366.0
BYD3_k127_5383377_3 PFAM amidohydrolase 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 343.0
BYD3_k127_5383377_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003823 279.0
BYD3_k127_5383377_5 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000004299 204.0
BYD3_k127_5411146_0 COG0044 Dihydroorotase and related cyclic amidohydrolases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 542.0
BYD3_k127_5411146_1 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003848 274.0
BYD3_k127_5411146_2 Dehydrogenase E1 component - - - 0.0000000000000000000000000000000000000000000001608 184.0
BYD3_k127_5411146_3 OmpA-like transmembrane domain - - - 0.0000000000000000000000000000004359 132.0
BYD3_k127_5411146_4 Domain of unknown function (DUF1848) - - - 0.0000000000000000000000000000009115 130.0
BYD3_k127_5421959_0 Histidine kinase-like ATPases - - - 3.215e-270 898.0
BYD3_k127_5421959_1 Histidine kinase-like ATPases - - - 2.369e-243 799.0
BYD3_k127_5421959_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 586.0
BYD3_k127_5421959_3 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 415.0
BYD3_k127_5421959_4 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000001374 227.0
BYD3_k127_5421959_5 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000009046 218.0
BYD3_k127_5421959_6 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000001878 215.0
BYD3_k127_5421959_7 PFAM response regulator receiver K11443 - - 0.00000000000000000000000000000004345 134.0
BYD3_k127_5421959_8 phosphorelay signal transduction system K11443 - - 0.0000000000000000000000000000001727 136.0
BYD3_k127_5512336_0 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.0 1220.0
BYD3_k127_5512336_1 Protein involved in propionate catabolism - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 424.0
BYD3_k127_5512336_2 Alpha amylase catalytic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009461 415.0
BYD3_k127_5512336_3 Belongs to the mandelate racemase muconate lactonizing enzyme family K19802 - 5.1.1.20 0.00000000000000000000000000000000000000000000000000000000000009401 217.0
BYD3_k127_5512336_4 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000003847 162.0
BYD3_k127_5512336_5 glutathione transferase activity K00799 - 2.5.1.18 0.00000000000000000000000000000000005743 141.0
BYD3_k127_5512336_6 glyoxalase bleomycin resistance protein dioxygenase K06991 - - 0.000000000000000000000000000000003873 134.0
BYD3_k127_5512336_7 - - - - 0.000000000003551 70.0
BYD3_k127_5522972_0 Serine aminopeptidase, S33 - - - 5.85e-256 803.0
BYD3_k127_5522972_1 Dual specificity phosphatase, catalytic domain K01090 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 464.0
BYD3_k127_5522972_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 291.0
BYD3_k127_5522972_3 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001327 295.0
BYD3_k127_5522972_4 CDP-alcohol phosphatidyltransferase K00995 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000004727 209.0
BYD3_k127_5522972_5 Amidohydrolase - - - 0.00000000000000000000000000000000001655 136.0
BYD3_k127_5527851_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006164 557.0
BYD3_k127_5527851_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 486.0
BYD3_k127_5527851_10 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000003606 250.0
BYD3_k127_5527851_11 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000007751 190.0
BYD3_k127_5527851_12 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000008353 194.0
BYD3_k127_5527851_13 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000005389 186.0
BYD3_k127_5527851_14 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 - - 0.00000000000000000000000000000000000000000006912 164.0
BYD3_k127_5527851_15 Beta/gamma crystallins - - - 0.0000000000000000000000000000000000001329 149.0
BYD3_k127_5527851_16 NIPSNAP - - - 0.000000000000000000000000000000007673 137.0
BYD3_k127_5527851_17 COG0822 NifU homolog involved in Fe-S cluster formation - - - 0.000000000000000000000000000006406 124.0
BYD3_k127_5527851_18 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.00000000000000000000003127 112.0
BYD3_k127_5527851_19 Cupin domain - - - 0.000000002502 64.0
BYD3_k127_5527851_2 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases K00101 - 1.1.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000423 474.0
BYD3_k127_5527851_20 Hydantoin racemase K16841 - 5.1.99.3 0.00000002397 65.0
BYD3_k127_5527851_3 sequence-specific DNA binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 346.0
BYD3_k127_5527851_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004398 305.0
BYD3_k127_5527851_5 ribonuclease inhibitor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 297.0
BYD3_k127_5527851_6 Oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009417 283.0
BYD3_k127_5527851_7 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003867 277.0
BYD3_k127_5527851_8 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006196 256.0
BYD3_k127_5527851_9 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002205 243.0
BYD3_k127_5542290_0 Berberine and berberine like - - - 1.012e-212 669.0
BYD3_k127_5542290_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 543.0
BYD3_k127_5542290_10 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000002418 140.0
BYD3_k127_5542290_2 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005576 531.0
BYD3_k127_5542290_3 Amidohydrolase K07045,K14333,K15063,K20941 - 4.1.1.103,4.1.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009463 391.0
BYD3_k127_5542290_4 Crp-like helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 347.0
BYD3_k127_5542290_5 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 339.0
BYD3_k127_5542290_6 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000007517 220.0
BYD3_k127_5542290_7 eight transmembrane protein EpsH - - - 0.000000000000000000000000000000000000000000000000000000000003912 234.0
BYD3_k127_5542290_8 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000005413 194.0
BYD3_k127_5542290_9 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000006561 209.0
BYD3_k127_5549113_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 5.441e-226 714.0
BYD3_k127_5549113_1 Gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 2.059e-217 685.0
BYD3_k127_5549113_10 response to oxidative stress K04063 - - 0.00000000000000000000000000000000000000000000000000000006698 198.0
BYD3_k127_5549113_11 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000001189 190.0
BYD3_k127_5549113_12 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000002311 151.0
BYD3_k127_5549113_13 phosphorelay signal transduction system K11443 - - 0.000000000000000000000000000000000002613 154.0
BYD3_k127_5549113_14 - - - - 0.0000000000000000000000000000000001364 139.0
BYD3_k127_5549113_15 Pfam Response regulator receiver K11443 - - 0.0000000000000000000000000002927 120.0
BYD3_k127_5549113_16 OsmC-like protein - - - 0.00000000000002628 76.0
BYD3_k127_5549113_2 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 587.0
BYD3_k127_5549113_3 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 567.0
BYD3_k127_5549113_4 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008123 449.0
BYD3_k127_5549113_5 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 420.0
BYD3_k127_5549113_6 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 374.0
BYD3_k127_5549113_7 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003031 249.0
BYD3_k127_5549113_8 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000334 218.0
BYD3_k127_5549113_9 Cytidylate kinase-like family - - - 0.0000000000000000000000000000000000000000000000000000000000009419 220.0
BYD3_k127_5584765_0 FecR protein - - - 2.566e-297 950.0
BYD3_k127_5584765_1 Belongs to the glutaminase family K01425 - 3.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003034 606.0
BYD3_k127_5584765_10 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000002019 177.0
BYD3_k127_5584765_11 - - - - 0.00000000000000000000000000000000000000000005566 168.0
BYD3_k127_5584765_12 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000001231 169.0
BYD3_k127_5584765_13 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07716 - 2.7.13.3 0.0000000000000000000000000000000000001154 146.0
BYD3_k127_5584765_14 MmgE/PrpD family - - - 0.00000000000000000000000000003305 133.0
BYD3_k127_5584765_15 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.0000000000000000001164 101.0
BYD3_k127_5584765_16 Protein of unknown function (DUF2934) - - - 0.000002003 55.0
BYD3_k127_5584765_17 Belongs to the prokaryotic GSH synthase family K01920 GO:0000287,GO:0003674,GO:0003824,GO:0004363,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0019184,GO:0034641,GO:0042398,GO:0043043,GO:0043167,GO:0043169,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:1901564,GO:1901566,GO:1901576 6.3.2.3 0.0005525 51.0
BYD3_k127_5584765_2 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006974 589.0
BYD3_k127_5584765_3 protein involved in response to NO K07234 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 349.0
BYD3_k127_5584765_4 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 353.0
BYD3_k127_5584765_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008958 309.0
BYD3_k127_5584765_6 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 301.0
BYD3_k127_5584765_7 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001939 276.0
BYD3_k127_5584765_8 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001924 250.0
BYD3_k127_5584765_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000003371 239.0
BYD3_k127_5593504_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676,K01678,K03780 - 4.2.1.2,4.2.1.32 2.818e-264 827.0
BYD3_k127_5593504_1 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 535.0
BYD3_k127_5593504_2 Pyridoxal-phosphate dependent enzyme K01738 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 523.0
BYD3_k127_5593504_3 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 373.0
BYD3_k127_5593504_4 serine protease K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 355.0
BYD3_k127_5593504_5 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 358.0
BYD3_k127_5593504_6 Mut7-C RNAse domain K09122 - - 0.0000000000000000000000000000000000000000000000000000000000000012 228.0
BYD3_k127_5593504_7 SelR domain K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000004522 222.0
BYD3_k127_5593504_8 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000005399 197.0
BYD3_k127_5593504_9 Haem-degrading - - - 0.00000000000000000000000000000000000000000000004338 173.0
BYD3_k127_5685022_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 1.246e-272 850.0
BYD3_k127_5685022_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.596e-204 645.0
BYD3_k127_5685022_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 364.0
BYD3_k127_5685022_3 SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 297.0
BYD3_k127_5685022_4 Thioredoxin K05838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001115 274.0
BYD3_k127_5685022_5 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000004909 242.0
BYD3_k127_5685022_6 preprotein translocase subunit YajC K03210 - - 0.000000000000000000000000000000000002828 141.0
BYD3_k127_5685022_7 MmgE PrpD family protein - - - 0.000000000000000000000006282 102.0
BYD3_k127_5688537_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 595.0
BYD3_k127_5688537_1 Aconitase family (aconitate hydratase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 508.0
BYD3_k127_569449_0 Glutathione S-transferase, C-terminal domain K07393 - 1.8.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006832 425.0
BYD3_k127_569449_1 Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility - - - 0.000000000000000000000000000000000000000004474 165.0
BYD3_k127_569449_2 PFAM Cupin 2 conserved barrel domain protein K21700 - - 0.0000000000000000000000000000000000296 137.0
BYD3_k127_569449_3 Flagellar hook-length control protein FliK - - - 0.000000000000000000000000001144 123.0
BYD3_k127_569449_4 cytoplasmic domain of flagellar protein FhlB K04061 - - 0.000000000000000000000000002571 120.0
BYD3_k127_5707513_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 9.778e-222 694.0
BYD3_k127_5707513_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006142 503.0
BYD3_k127_5707513_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 348.0
BYD3_k127_5707513_3 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009564 292.0
BYD3_k127_5707513_4 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000005335 243.0
BYD3_k127_5707513_5 CoA-transferase family III K01796 - 5.1.99.4 0.0000000000000000000000000000000000000000000000000000000000003154 216.0
BYD3_k127_5707513_6 - - - - 0.0000000000000000000000000004894 127.0
BYD3_k127_5707513_7 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0001941 51.0
BYD3_k127_5728231_0 Methionine synthase K00548 - 2.1.1.13 0.0 1763.0
BYD3_k127_5728231_1 N-6 DNA Methylase K03427 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000008936 230.0
BYD3_k127_5728231_2 Type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.00000000000000000000000000000000001811 146.0
BYD3_k127_5728231_3 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.00002191 47.0
BYD3_k127_5791327_0 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002451 287.0
BYD3_k127_5791327_1 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002255 259.0
BYD3_k127_5791327_2 PFAM Asp Glu hydantoin racemase K01799 - 5.2.1.1 0.000000000000000000000000000000000000000000001994 173.0
BYD3_k127_5791327_3 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000002481 177.0
BYD3_k127_5792608_0 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 466.0
BYD3_k127_5792608_1 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 325.0
BYD3_k127_5792608_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001209 278.0
BYD3_k127_5792608_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000419 252.0
BYD3_k127_5792608_4 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000008936 237.0
BYD3_k127_5792608_5 Ankyrin repeat K06867 - - 0.00000000000000000000000000000000000000000002981 168.0
BYD3_k127_5795315_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 1.697e-210 664.0
BYD3_k127_5795315_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007977 547.0
BYD3_k127_5795315_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 381.0
BYD3_k127_5795315_3 Cell wall formation K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 394.0
BYD3_k127_5795315_4 cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 339.0
BYD3_k127_5795315_5 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.0000000000000000000000000000000000000000000000000000000000000000001722 237.0
BYD3_k127_5799700_0 PFAM Carbamoyl-phosphate synthase L chain K01961 - 6.3.4.14,6.4.1.2 9.906e-233 726.0
BYD3_k127_5799700_1 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 3.253e-203 653.0
BYD3_k127_5799700_10 LytTr DNA-binding domain K08083 - - 0.0000000000000000000000000000000000000001091 153.0
BYD3_k127_5799700_11 protein involved in tolerance to divalent cations K03926 - - 0.0000000000000000000000000000000000001366 145.0
BYD3_k127_5799700_12 LytTr DNA-binding domain K08083 - - 0.0000000002117 61.0
BYD3_k127_5799700_13 Ribosomal protein L11 methyltransferase K02687 - - 0.00000001554 66.0
BYD3_k127_5799700_2 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 432.0
BYD3_k127_5799700_3 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 361.0
BYD3_k127_5799700_4 enzyme of heme biosynthesis K02496,K13543 - 2.1.1.107,4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 310.0
BYD3_k127_5799700_5 HemY protein N-terminus K02498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 316.0
BYD3_k127_5799700_6 synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000002225 255.0
BYD3_k127_5799700_7 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000009493 199.0
BYD3_k127_5799700_8 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000000000000000000003323 186.0
BYD3_k127_5799700_9 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000004367 169.0
BYD3_k127_5869051_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 2.834e-240 760.0
BYD3_k127_5869051_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 375.0
BYD3_k127_5869051_2 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.000000000000000000000001799 108.0
BYD3_k127_5869051_3 MraZ protein, putative antitoxin-like K03925 - - 0.000000000000000000001383 95.0
BYD3_k127_5872960_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1260.0
BYD3_k127_5872960_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 6.261e-302 933.0
BYD3_k127_5872960_10 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004226 463.0
BYD3_k127_5872960_11 Prephenate dehydratase K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 433.0
BYD3_k127_5872960_12 3-beta hydroxysteroid dehydrogenase/isomerase family K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 424.0
BYD3_k127_5872960_13 Bifunctional protein K03272,K21344 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 401.0
BYD3_k127_5872960_14 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 380.0
BYD3_k127_5872960_15 Transcriptional regulator K13634 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 365.0
BYD3_k127_5872960_16 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000386 355.0
BYD3_k127_5872960_17 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007495 318.0
BYD3_k127_5872960_18 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000002803 247.0
BYD3_k127_5872960_19 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 - 3.1.3.105 0.0000000000000000000000000000000000000000000000000000000000000000000008097 244.0
BYD3_k127_5872960_2 PFAM nitrite and sulphite reductase 4Fe-4S K00381 - 1.8.1.2 3e-254 796.0
BYD3_k127_5872960_20 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000005275 237.0
BYD3_k127_5872960_21 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.000000000000000000000000000000000000000000007306 165.0
BYD3_k127_5872960_22 conserved protein ucp030820 - - - 0.00000000000000000000000000000000000004231 149.0
BYD3_k127_5872960_23 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000009671 151.0
BYD3_k127_5872960_24 Lipopolysaccharide assembly protein A domain K08992 - - 0.000000000000000000001703 98.0
BYD3_k127_5872960_3 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 572.0
BYD3_k127_5872960_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 559.0
BYD3_k127_5872960_5 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000963 550.0
BYD3_k127_5872960_6 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 551.0
BYD3_k127_5872960_7 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 492.0
BYD3_k127_5872960_8 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006520,GO:0006553,GO:0006563,GO:0006564,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009085,GO:0009089,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019752,GO:0019842,GO:0030170,GO:0033359,GO:0034641,GO:0036094,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046394,GO:0046451,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901615,GO:1901617 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007114 490.0
BYD3_k127_5872960_9 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 490.0
BYD3_k127_5883529_0 dehydrogenase, E1 component K00164 - 1.2.4.2 0.0 1244.0
BYD3_k127_5883529_1 PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A K01908 - 6.2.1.17 6.398e-308 965.0
BYD3_k127_5883529_2 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 603.0
BYD3_k127_5883529_3 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 514.0
BYD3_k127_5883529_4 PFAM Alcohol dehydrogenase GroES domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 421.0
BYD3_k127_5883529_5 PFAM AFG1-family ATPase K06916 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 384.0
BYD3_k127_5883529_6 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001105 256.0
BYD3_k127_5883529_7 Protein of unknown function (DUF559) - - - 0.000000000002646 78.0
BYD3_k127_5895342_0 Proton-conducting membrane transporter K05568 - - 4.671e-198 632.0
BYD3_k127_5895342_1 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 597.0
BYD3_k127_5895342_10 - - - - 0.00000000000002273 87.0
BYD3_k127_5895342_2 Proton-conducting membrane transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 364.0
BYD3_k127_5895342_3 Proton-conducting membrane transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 292.0
BYD3_k127_5895342_4 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) K02351 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009566 252.0
BYD3_k127_5895342_5 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000001049 198.0
BYD3_k127_5895342_6 - - - - 0.00000000000000000000000000000000000005538 147.0
BYD3_k127_5895342_8 hyperosmotic response - - - 0.0000000000000000007145 98.0
BYD3_k127_5895342_9 Proton-conducting membrane transporter K00343,K05568 - 1.6.5.3 0.00000000000001223 76.0
BYD3_k127_5940677_0 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 517.0
BYD3_k127_5940677_1 Peptidase M48 Ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 362.0
BYD3_k127_5940677_10 - - - - 0.000000000000000000000000000000348 141.0
BYD3_k127_5940677_11 - - - - 0.000000000000003806 80.0
BYD3_k127_5940677_12 Alpha-2-Macroglobulin K06894 - - 0.0000000001068 68.0
BYD3_k127_5940677_2 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 344.0
BYD3_k127_5940677_3 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006488 317.0
BYD3_k127_5940677_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 305.0
BYD3_k127_5940677_5 SMP-30 Gluconolaconase K14274 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004437 259.0
BYD3_k127_5940677_6 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001701 261.0
BYD3_k127_5940677_7 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003031 247.0
BYD3_k127_5940677_8 - - - - 0.000000000000000000000000000000000000000000000000000000006484 208.0
BYD3_k127_5940677_9 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000001405 201.0
BYD3_k127_5952250_0 Penicillin acylase K01434 - 3.5.1.11 1.222e-210 684.0
BYD3_k127_5952250_1 MmgE PrpD family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 373.0
BYD3_k127_5952250_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000434 266.0
BYD3_k127_5952250_3 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002055 261.0
BYD3_k127_5952250_4 GTP binding K06942 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000001385 255.0
BYD3_k127_5952250_5 MmgE/PrpD family - - - 0.0002154 52.0
BYD3_k127_6010672_0 e3 binding domain K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255 394.0
BYD3_k127_6010672_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004142 284.0
BYD3_k127_6010672_2 Nicotinamidase K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000002494 250.0
BYD3_k127_6010672_3 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000121 203.0
BYD3_k127_6010672_4 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit K00162 - 1.2.4.1 0.0000000000000000000000000000000000000000116 154.0
BYD3_k127_6010672_5 Belongs to the universal stress protein A family - - - 0.00000000000000000000000006106 112.0
BYD3_k127_6010672_6 - - - - 0.0000000000000000001127 91.0
BYD3_k127_6010672_7 acyl carrier protein - - - 0.0000000000000000005031 96.0
BYD3_k127_6049432_0 AMP-binding enzyme C-terminal domain K12507 - - 1.282e-233 742.0
BYD3_k127_6049432_1 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 574.0
BYD3_k127_6049432_2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 401.0
BYD3_k127_6049432_3 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 300.0
BYD3_k127_6049432_4 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006961 269.0
BYD3_k127_6049432_5 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000667 274.0
BYD3_k127_6049432_6 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000133 265.0
BYD3_k127_6052247_0 Protein of unknown function - - - 0.0 1139.0
BYD3_k127_6052247_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 4.987e-300 947.0
BYD3_k127_6052247_2 modulator of DNA gyrase K03568 - - 3.679e-245 766.0
BYD3_k127_6052247_3 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 504.0
BYD3_k127_6052247_4 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005625 480.0
BYD3_k127_6052247_5 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 385.0
BYD3_k127_6052247_6 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 356.0
BYD3_k127_6052247_7 Zinc-finger domain - - - 0.000000000000000000000556 100.0
BYD3_k127_6052247_8 SnoaL-like domain - - - 0.000000000000000000005403 99.0
BYD3_k127_6102433_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008796 471.0
BYD3_k127_6102433_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008985 290.0
BYD3_k127_61205_0 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 5.355e-244 760.0
BYD3_k127_61205_1 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 1.088e-211 672.0
BYD3_k127_61205_10 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007769 268.0
BYD3_k127_61205_11 Pfam:Pyridox_oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001117 237.0
BYD3_k127_61205_12 CoA-binding protein K06929 - - 0.00000000000000000000000000000000000000000000000000000000000000000002626 236.0
BYD3_k127_61205_13 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000000000000000000000009572 225.0
BYD3_k127_61205_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000003937 243.0
BYD3_k127_61205_15 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000000000000000502 217.0
BYD3_k127_61205_16 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000003233 223.0
BYD3_k127_61205_17 transporter component K07112 - - 0.000000000000000000000000000000000000000000000000000000000001542 213.0
BYD3_k127_61205_18 transporter component K07112 - - 0.000000000000000000000000000000000000000000000000000000004432 201.0
BYD3_k127_61205_19 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000644 187.0
BYD3_k127_61205_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006881 489.0
BYD3_k127_61205_20 Belongs to the small heat shock protein (HSP20) family - - - 0.000000000000000000000000000000000000000000000002968 177.0
BYD3_k127_61205_21 - - - - 0.000000000000000000000000000000000000006112 149.0
BYD3_k127_61205_22 membrane transporter protein K07090 - - 0.000000000000000000000000000001999 131.0
BYD3_k127_61205_23 PFAM Cold-shock protein, DNA-binding K03704 - - 0.00000000000000000000000000003269 117.0
BYD3_k127_61205_24 MerR HTH family regulatory protein K18997 - - 0.000000000000000000002802 98.0
BYD3_k127_61205_25 PFAM Cold-shock protein, DNA-binding - - - 0.0000000000000001412 84.0
BYD3_k127_61205_26 ABC transporter substrate binding protein K01989 - - 0.0000000000004046 78.0
BYD3_k127_61205_27 MTH538 TIR-like domain (DUF1863) - - - 0.00000000000416 78.0
BYD3_k127_61205_28 PFAM Carboxymuconolactone decarboxylase - - - 0.0000000325 59.0
BYD3_k127_61205_3 von Willebrand factor (vWF) type A domain K02448 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009398 490.0
BYD3_k127_61205_30 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0001212 48.0
BYD3_k127_61205_31 - - - - 0.0003362 49.0
BYD3_k127_61205_4 heat shock protein DnaJ K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 473.0
BYD3_k127_61205_5 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004515 439.0
BYD3_k127_61205_6 Cytochrome c K02305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 398.0
BYD3_k127_61205_7 PFAM ATPase associated with various cellular activities, AAA_5 K04748,K09882 - 6.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 393.0
BYD3_k127_61205_8 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 314.0
BYD3_k127_61205_9 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000149 286.0
BYD3_k127_6147358_0 PFAM CheB methylesterase K13924 - 2.1.1.80,3.1.1.61 1.079e-299 945.0
BYD3_k127_6147358_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001326 276.0
BYD3_k127_6147358_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000002823 221.0
BYD3_k127_6147358_3 protein conserved in bacteria K07795 - - 0.00000000000000000000000000000000000000000000000002031 187.0
BYD3_k127_6147358_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000001027 87.0
BYD3_k127_6163950_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1197.0
BYD3_k127_6163950_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 1.67e-321 1005.0
BYD3_k127_6163950_10 PFAM CheW domain protein K02659 - - 0.0000000000000000000000000000000000000003029 154.0
BYD3_k127_6163950_11 PFAM Cold-shock protein, DNA-binding K03704 - - 0.00000000000000000000000000000000001318 135.0
BYD3_k127_6163950_12 Cytochrome c, class I - - - 0.0000000000000000000002033 100.0
BYD3_k127_6163950_2 Histidine kinase K02487,K06596 - - 5.071e-291 953.0
BYD3_k127_6163950_3 sulfide dehydrogenase K05301 - 1.8.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 564.0
BYD3_k127_6163950_4 Methyl-accepting chemotaxis protein K02660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 434.0
BYD3_k127_6163950_5 FIST N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 418.0
BYD3_k127_6163950_6 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 298.0
BYD3_k127_6163950_7 cheY-homologous receiver domain K02657 - - 0.000000000000000000000000000000000000000000000002311 195.0
BYD3_k127_6163950_8 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000000007893 158.0
BYD3_k127_6163950_9 response regulator receiver K02658 - - 0.00000000000000000000000000000000000000007011 154.0
BYD3_k127_6214978_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004716 360.0
BYD3_k127_6214978_1 MTH538 TIR-like domain (DUF1863) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005799 380.0
BYD3_k127_6214978_10 pathogenesis - - - 0.000000000000000000000000005953 128.0
BYD3_k127_6214978_11 Luciferase-like monooxygenase - - - 0.0000000000000378 81.0
BYD3_k127_6214978_12 amidohydrolase K03392 - 4.1.1.45 0.00000005565 55.0
BYD3_k127_6214978_2 Hydrolase CocE NonD family K06978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004873 297.0
BYD3_k127_6214978_3 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003704 284.0
BYD3_k127_6214978_4 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001932 276.0
BYD3_k127_6214978_5 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009297 284.0
BYD3_k127_6214978_6 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001165 267.0
BYD3_k127_6214978_7 Amidohydrolase K03392,K22213 - 4.1.1.45,4.1.1.52 0.000000000000000000000000000000000000000000000000000000000000000000001424 248.0
BYD3_k127_6214978_8 Tripartite tricarboxylate transporter family receptor K07795 - - 0.00000000000000000000000000000000000000000000003099 184.0
BYD3_k127_6214978_9 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000002113 128.0
BYD3_k127_6220998_0 SNARE associated Golgi protein - - - 6.155e-287 889.0
BYD3_k127_6220998_1 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004957 327.0
BYD3_k127_6220998_2 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000008599 235.0
BYD3_k127_6279266_0 mandelate racemase muconate lactonizing K22209 - 4.2.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 610.0
BYD3_k127_6279266_1 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 587.0
BYD3_k127_6279266_2 FCD - - - 0.000000000000000000000000000000000000000000000000000000000243 213.0
BYD3_k127_6279266_3 NUDIX hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000524 212.0
BYD3_k127_6279266_4 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000004284 154.0
BYD3_k127_6279266_5 NYN domain - - - 0.00000000000000000000000000000000000151 138.0
BYD3_k127_6279266_6 Translation Initiation Inhibitor YjgF Family - - - 0.0000000000000000000000000000000007284 134.0
BYD3_k127_6279266_7 psiF repeat - - - 0.000000003603 64.0
BYD3_k127_6284442_0 Transport of potassium into the cell K03549 - - 8.956e-201 644.0
BYD3_k127_6284442_1 PFAM conserved - - - 0.00000000000000000000000000209 117.0
BYD3_k127_6284442_2 COG3653 N-acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.00000000000000000000623 93.0
BYD3_k127_6296940_0 (ABC) transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008836 377.0
BYD3_k127_6296940_1 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007136 281.0
BYD3_k127_6296940_2 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000003049 218.0
BYD3_k127_6296940_3 - - - - 0.00000000000000000000000005064 111.0
BYD3_k127_6298002_0 FAD linked oxidase domain protein - - - 0.0 1767.0
BYD3_k127_6298002_1 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 9.233e-228 714.0
BYD3_k127_6298002_10 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000000001788 189.0
BYD3_k127_6298002_11 membrane - - - 0.0000000000000000000000000000000000000007016 153.0
BYD3_k127_6298002_12 protein conserved in bacteria K03690 - - 0.00000000000000000000000000000000000002884 151.0
BYD3_k127_6298002_14 PFAM NAD-dependent epimerase dehydratase K08678 - 4.1.1.35 0.0002496 43.0
BYD3_k127_6298002_15 VanZ like family - - - 0.0003525 44.0
BYD3_k127_6298002_2 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 453.0
BYD3_k127_6298002_3 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 441.0
BYD3_k127_6298002_4 PFAM aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 394.0
BYD3_k127_6298002_5 single-stranded DNA 5'-3' exodeoxyribonuclease activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 358.0
BYD3_k127_6298002_6 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 335.0
BYD3_k127_6298002_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000816 262.0
BYD3_k127_6298002_8 Tim44 - - - 0.000000000000000000000000000000000000000000000000000000000002441 219.0
BYD3_k127_6298002_9 - - - - 0.00000000000000000000000000000000000000000000000000001282 209.0
BYD3_k127_6298716_0 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 559.0
BYD3_k127_6298716_1 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008804 557.0
BYD3_k127_6298716_2 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 415.0
BYD3_k127_6298716_3 NapC/NirT cytochrome c family, N-terminal region K02569 - - 0.00000000000000000000000000000000000000000000000000000000003223 211.0
BYD3_k127_6298716_4 Transposase, Mutator family - - - 0.00000000000000000000000000000000002624 147.0
BYD3_k127_6298716_5 Cytochrome c K08738 - - 0.0000000000000000000000000000000003237 134.0
BYD3_k127_6324472_0 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007251 567.0
BYD3_k127_6324472_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 390.0
BYD3_k127_6324472_10 Transcriptional regulator - - - 0.000004971 55.0
BYD3_k127_6324472_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 394.0
BYD3_k127_6324472_3 NADPH-dependent FMN reductase K19784 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002821 282.0
BYD3_k127_6324472_4 signal peptide protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001566 258.0
BYD3_k127_6324472_5 radicals which are normally produced within the cells and which are toxic to biological systems K04564 GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000001149 231.0
BYD3_k127_6324472_6 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000005087 140.0
BYD3_k127_6324472_7 - - - - 0.00000000000000000000001818 103.0
BYD3_k127_6324472_8 - - - - 0.0000000000000002846 81.0
BYD3_k127_6324472_9 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000002341 59.0
BYD3_k127_6356253_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 3.794e-290 911.0
BYD3_k127_6356253_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 396.0
BYD3_k127_6356253_2 dna polymerase iii K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 294.0
BYD3_k127_6356253_3 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 291.0
BYD3_k127_6356253_4 response regulator K02483,K07666,K07774 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000281 252.0
BYD3_k127_6356253_5 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.000000000000000000000000000000000000000000002869 169.0
BYD3_k127_6356253_6 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000001162 153.0
BYD3_k127_6356253_7 Domain of unknown function (DUF4212) - - - 0.000000000000000000000000000000004037 137.0
BYD3_k127_6356253_8 Copper resistance protein - - - 0.000000005254 61.0
BYD3_k127_6356253_9 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.000001025 56.0
BYD3_k127_6382504_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component K02004 - - 4.426e-227 727.0
BYD3_k127_6382504_1 protein conserved in bacteria K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009201 479.0
BYD3_k127_6382504_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 470.0
BYD3_k127_6382504_3 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 490.0
BYD3_k127_6382504_4 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 393.0
BYD3_k127_6382504_5 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 299.0
BYD3_k127_6382504_6 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000000000000000007407 255.0
BYD3_k127_6382504_7 C4-dicarboxylate ABC transporter permease - - - 0.00000000000000000000000000000000000000000000000000000000000000001152 228.0
BYD3_k127_6412649_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead domain K13482 - 1.17.1.4 2.997e-313 982.0
BYD3_k127_6412649_1 Xanthine dehydrogenase iron-sulfur cluster and FAD-binding subunit A K13481 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 366.0
BYD3_k127_6447453_0 Helicase - - - 0.0 1106.0
BYD3_k127_6447453_1 Class II Aldolase and Adducin N-terminal domain K00068 - 1.1.1.140 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 487.0
BYD3_k127_6447453_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 437.0
BYD3_k127_6447453_3 Enoyl-(Acyl carrier protein) reductase K00059,K00076 - 1.1.1.100,1.1.1.159 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009593 361.0
BYD3_k127_6447453_4 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002713 237.0
BYD3_k127_6447453_5 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000000000003791 211.0
BYD3_k127_6455619_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 3.301e-208 679.0
BYD3_k127_6455619_1 Amidohydrolase family K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005362 400.0
BYD3_k127_6455619_10 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000002489 71.0
BYD3_k127_6455619_2 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004349 329.0
BYD3_k127_6455619_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007322 307.0
BYD3_k127_6455619_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004825 284.0
BYD3_k127_6455619_5 acetamidase formamidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003507 284.0
BYD3_k127_6455619_6 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009241 274.0
BYD3_k127_6455619_7 protein involved in propionate catabolism - - - 0.0000000000000000000000000000000000000000000003083 184.0
BYD3_k127_6455619_8 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides - - - 0.0000000000000000000000000000005734 134.0
BYD3_k127_6455619_9 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000705 95.0
BYD3_k127_6481109_0 Zinc-dependent metalloprotease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 516.0
BYD3_k127_6481109_1 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005096 527.0
BYD3_k127_6481109_10 TIR domain - - - 0.0000000000199 73.0
BYD3_k127_6481109_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 403.0
BYD3_k127_6481109_3 Acyl-CoA dehydrogenase, C-terminal domain K22027 - 1.14.13.235 0.0000000000000000000000000000000000000000000000000000000000000000000000000006221 271.0
BYD3_k127_6481109_4 PFAM Stage II sporulation - - - 0.00000000000000000000000000000000000000000000000000000000000000002895 240.0
BYD3_k127_6481109_5 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000001538 224.0
BYD3_k127_6481109_6 STAS domain K17762 - - 0.00000000000000000000000000000000000000000000003296 172.0
BYD3_k127_6481109_7 Histidine kinase-like ATPase domain K17752 - 2.7.11.1 0.0000000000000000000000000000000000000000002839 162.0
BYD3_k127_6481109_8 Dehydrogenase reductase K00046,K00065,K20900 GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0008150,GO:0008152,GO:0009056,GO:0009743,GO:0009758,GO:0009987,GO:0010033,GO:0016052,GO:0016491,GO:0016614,GO:0016616,GO:0030246,GO:0042221,GO:0044238,GO:0047880,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071310,GO:0071322,GO:0071704,GO:1901575,GO:1901700,GO:1901701 1.1.1.127,1.1.1.403,1.1.1.69 0.000000000000000000000000000000000000005824 165.0
BYD3_k127_6481975_0 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000012 246.0
BYD3_k127_6481975_1 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000003441 230.0
BYD3_k127_6481975_2 RND efflux system, outer membrane lipoprotein - - - 0.00000000000000000000000000000000000000000000000001442 184.0
BYD3_k127_6481975_3 Alpha/beta hydrolase of unknown function (DUF900) - - - 0.000000000000000000000002609 105.0
BYD3_k127_6481975_4 Endoribonuclease L-PSP - - - 0.000000000000000001199 102.0
BYD3_k127_6481975_5 - - - - 0.000000000001633 70.0
BYD3_k127_648254_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006489 501.0
BYD3_k127_648254_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 513.0
BYD3_k127_648254_10 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00038 - 1.1.1.53 0.0000000000000000000000000000000000000000000000000000000001367 227.0
BYD3_k127_648254_11 Cupin - - - 0.00000000000000000000000000000000000000000000002814 175.0
BYD3_k127_648254_12 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 - - 0.00000000000000000000000000000000000004643 146.0
BYD3_k127_648254_13 Protein of unknown function (DUF3617) - - - 0.00000000000000000000000000000002969 133.0
BYD3_k127_648254_14 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.000000000000000000000000000003698 132.0
BYD3_k127_648254_15 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.000000000000000000000000007782 119.0
BYD3_k127_648254_2 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 443.0
BYD3_k127_648254_3 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 442.0
BYD3_k127_648254_4 PFAM Serine threonine protein kinase-related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 397.0
BYD3_k127_648254_5 Phosphoenolpyruvate phosphomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 318.0
BYD3_k127_648254_6 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001355 294.0
BYD3_k127_648254_7 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003598 291.0
BYD3_k127_648254_8 Asp/Glu/Hydantoin racemase K01799 - 5.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000005326 260.0
BYD3_k127_648254_9 e1 component (alpha subunit) K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000006514 214.0
BYD3_k127_6514908_0 Belongs to the CinA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008755 612.0
BYD3_k127_6514908_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009712 410.0
BYD3_k127_6514908_10 Oxidoreductase family, C-terminal alpha/beta domain K00010 - 1.1.1.18,1.1.1.369 0.0000008974 54.0
BYD3_k127_6514908_11 Maleate cis-trans isomerase K01799 - 5.2.1.1 0.000001127 59.0
BYD3_k127_6514908_12 Peroxiredoxin K03564 - 1.11.1.15 0.0002896 45.0
BYD3_k127_6514908_2 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 416.0
BYD3_k127_6514908_3 PFAM Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006739 349.0
BYD3_k127_6514908_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003896 286.0
BYD3_k127_6514908_5 Belongs to the HpcH HpaI aldolase family K00979,K02510 - 2.7.7.38,4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000146 295.0
BYD3_k127_6514908_6 Argininosuccinate lyase C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000009477 228.0
BYD3_k127_6514908_7 protein conserved in cyanobacteria - - - 0.0000000000000000000000001363 113.0
BYD3_k127_6514908_8 Redoxin K03386 - 1.11.1.15 0.0000000000000000000001276 100.0
BYD3_k127_6514908_9 Protein of unknown function (DUF3301) - - - 0.000000000000000000001225 110.0
BYD3_k127_6515605_0 PFAM Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 413.0
BYD3_k127_6515605_1 FAD dependent oxidoreductase K13796 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006467 376.0
BYD3_k127_6515605_2 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006358 374.0
BYD3_k127_6515605_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 309.0
BYD3_k127_6515605_4 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101 - 1.13.11.8 0.00000000000000000000000000000000000000000000000000000000000000000001678 241.0
BYD3_k127_6515605_5 lactoylglutathione lyase activity K05606 - 5.1.99.1 0.0000000000000000000000000000000005018 137.0
BYD3_k127_6515605_6 Aromatic-ring-opening dioxygenase LigAB, LigA subunit - - - 0.000005305 53.0
BYD3_k127_6515605_7 Major facilitator superfamily transporter - - - 0.0003375 53.0
BYD3_k127_6516602_0 Amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 568.0
BYD3_k127_6516602_1 ABC-type phosphate phosphonate transport system periplasmic component K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 527.0
BYD3_k127_6516602_10 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002997 255.0
BYD3_k127_6516602_11 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001836 250.0
BYD3_k127_6516602_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000004569 214.0
BYD3_k127_6516602_13 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000006402 222.0
BYD3_k127_6516602_14 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.00000000000000000000000000000000000000000000000000000002206 206.0
BYD3_k127_6516602_15 Pirin K06911 - - 0.00000000000000000000000000000000000000000000000000001472 190.0
BYD3_k127_6516602_16 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000002542 190.0
BYD3_k127_6516602_17 Invasion gene expression up-regulator, SirB - - - 0.0000000000000000000000000000000000000000000007743 173.0
BYD3_k127_6516602_18 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.000000000000000000000000000000000000000006059 163.0
BYD3_k127_6516602_19 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000058 145.0
BYD3_k127_6516602_2 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 528.0
BYD3_k127_6516602_20 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.000000000000000000000000000000000001671 149.0
BYD3_k127_6516602_21 rubredoxin - - - 0.000000000000000003913 95.0
BYD3_k127_6516602_22 Poly ADP-ribose K10798 GO:0000002,GO:0000003,GO:0000122,GO:0000166,GO:0000228,GO:0000302,GO:0000303,GO:0000305,GO:0000715,GO:0000723,GO:0000724,GO:0000725,GO:0000785,GO:0000790,GO:0000791,GO:0000976,GO:0000977,GO:0000981,GO:0001012,GO:0001067,GO:0001228,GO:0001817,GO:0001818,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002225,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002759,GO:0002760,GO:0002784,GO:0002786,GO:0002791,GO:0002792,GO:0002803,GO:0002805,GO:0002807,GO:0002808,GO:0002831,GO:0002833,GO:0002920,GO:0002922,GO:0003002,GO:0003006,GO:0003254,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003700,GO:0003824,GO:0003909,GO:0003910,GO:0003950,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005667,GO:0005694,GO:0005700,GO:0005703,GO:0005719,GO:0005730,GO:0005737,GO:0005739,GO:0006139,GO:0006140,GO:0006163,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006282,GO:0006284,GO:0006289,GO:0006293,GO:0006294,GO:0006296,GO:0006302,GO:0006310,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006471,GO:0006508,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006963,GO:0006974,GO:0006979,GO:0006996,GO:0006997,GO:0007000,GO:0007005,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007389,GO:0007552,GO:0007610,GO:0008069,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009266,GO:0009303,GO:0009314,GO:0009408,GO:0009410,GO:0009411,GO:0009416,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009798,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009950,GO:0009953,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010212,GO:0010243,GO:0010332,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010604,GO:0010605,GO:0010611,GO:0010613,GO:0010628,GO:0010629,GO:0010639,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0010990,GO:0012501,GO:0012505,GO:0014070,GO:0014742,GO:0014743,GO:0015030,GO:0016043,GO:0016070,GO:0016072,GO:0016333,GO:0016334,GO:0016485,GO:0016540,GO:0016604,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016886,GO:0017144,GO:0018130,GO:0018193,GO:0018209,GO:0018312,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022616,GO:0023019,GO:0023051,GO:0023052,GO:0023056,GO:0030097,GO:0030099,GO:0030154,GO:0030225,GO:0030331,GO:0030534,GO:0030575,GO:0030576,GO:0030707,GO:0030808,GO:0030809,GO:0030855,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031334,GO:0031347,GO:0031349,GO:0031960,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032042,GO:0032101,GO:0032103,GO:0032200,GO:0032204,GO:0032205,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032660,GO:0032700,GO:0032774,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033143,GO:0033145,GO:0033146,GO:0033148,GO:0033365,GO:0033554,GO:0033683,GO:0033993,GO:0034248,GO:0034250,GO:0034504,GO:0034599,GO:0034605,GO:0034613,GO:0034614,GO:0034622,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0034660,GO:0035079,GO:0035080,GO:0035257,GO:0035258,GO:0035363,GO:0036094,GO:0036211,GO:0040008,GO:0040009,GO:0042220,GO:0042221,GO:0042391,GO:0042393,GO:0042493,GO:0042592,GO:0042769,GO:0042802,GO:0042826,GO:0042981,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043279,GO:0043388,GO:0043412,GO:0043434,GO:0043484,GO:0043502,GO:0043504,GO:0043523,GO:0043565,GO:0043900,GO:0043902,GO:0043933,GO:0044030,GO:0044057,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0045087,GO:0045185,GO:0045595,GO:0045597,GO:0045739,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045936,GO:0045944,GO:0045980,GO:0046034,GO:0046332,GO:0046483,GO:0047485,GO:0048037,GO:0048148,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048545,GO:0048583,GO:0048584,GO:0048609,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050662,GO:0050707,GO:0050708,GO:0050709,GO:0050710,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050879,GO:0050881,GO:0050882,GO:0050896,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051052,GO:0051053,GO:0051054,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051103,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051223,GO:0051224,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051287,GO:0051385,GO:0051427,GO:0051457,GO:0051604,GO:0051606,GO:0051641,GO:0051651,GO:0051704,GO:0051716,GO:0051881,GO:0051900,GO:0051901,GO:0055086,GO:0060249,GO:0060255,GO:0060341,GO:0060359,GO:0060390,GO:0060391,GO:0060429,GO:0062012,GO:0062014,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070212,GO:0070412,GO:0070727,GO:0070848,GO:0070887,GO:0070911,GO:0071214,GO:0071241,GO:0071248,GO:0071294,GO:0071310,GO:0071363,GO:0071375,GO:0071417,GO:0071450,GO:0071451,GO:0071478,GO:0071482,GO:0071495,GO:0071559,GO:0071560,GO:0071704,GO:0071824,GO:0071840,GO:0072347,GO:0072521,GO:0072595,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090092,GO:0090100,GO:0090257,GO:0090304,GO:0090305,GO:0097159,GO:0097305,GO:0097659,GO:0098687,GO:0098781,GO:0104004,GO:0140096,GO:0140097,GO:0140110,GO:1900180,GO:1900182,GO:1900371,GO:1900372,GO:1900407,GO:1900424,GO:1900426,GO:1900542,GO:1900543,GO:1901135,GO:1901214,GO:1901216,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901652,GO:1901653,GO:1901654,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902175,GO:1902531,GO:1902679,GO:1902680,GO:1902882,GO:1903201,GO:1903203,GO:1903376,GO:1903506,GO:1903507,GO:1903508,GO:1903516,GO:1903518,GO:1903530,GO:1903531,GO:1903578,GO:1903579,GO:1903827,GO:1903829,GO:1904044,GO:1904181,GO:1904356,GO:1904357,GO:1904645,GO:1904646,GO:1904760,GO:1904762,GO:1904950,GO:1905076,GO:1905077,GO:1990404,GO:1990837,GO:1990966,GO:2000112,GO:2000113,GO:2000677,GO:2000679,GO:2001020,GO:2001022,GO:2001141,GO:2001169,GO:2001170,GO:2001233,GO:2001242,GO:2001251 2.4.2.30 0.0000002464 62.0
BYD3_k127_6516602_3 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 419.0
BYD3_k127_6516602_4 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 430.0
BYD3_k127_6516602_5 COG3639 ABC-type phosphate phosphonate transport system, permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 387.0
BYD3_k127_6516602_6 COG3639 ABC-type phosphate phosphonate transport system, permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006854 374.0
BYD3_k127_6516602_7 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 296.0
BYD3_k127_6516602_8 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004434 286.0
BYD3_k127_6516602_9 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008264 289.0
BYD3_k127_6527477_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0 1095.0
BYD3_k127_6527477_1 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 0.00000000000000000000000000000000000000000000000000000000007777 207.0
BYD3_k127_6542575_0 Putative serine dehydratase domain K18425 - 4.1.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 417.0
BYD3_k127_6542575_1 Transglycosylase SLT domain K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008363 342.0
BYD3_k127_6542575_2 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007909 308.0
BYD3_k127_6542575_3 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000009891 245.0
BYD3_k127_6542575_4 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000003227 189.0
BYD3_k127_65617_0 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 553.0
BYD3_k127_65617_1 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001631 260.0
BYD3_k127_6581578_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 3.716e-201 634.0
BYD3_k127_6581578_1 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 440.0
BYD3_k127_6581578_2 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007954 332.0
BYD3_k127_6581578_3 - - - - 0.000000000000000000000000000000000000000000000000002151 192.0
BYD3_k127_6583347_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 1.486e-199 651.0
BYD3_k127_6583347_1 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 506.0
BYD3_k127_6583347_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 493.0
BYD3_k127_6583347_3 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005193 399.0
BYD3_k127_6583347_4 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003506 345.0
BYD3_k127_6583347_5 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001563 276.0
BYD3_k127_6583347_6 TIGRFAM histidinol-phosphate phosphatase family protein K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000244 268.0
BYD3_k127_6646428_0 Vitamin K epoxide reductase family - - - 4e-323 1009.0
BYD3_k127_6646428_1 CoA-transferase family III - - - 5.123e-200 635.0
BYD3_k127_6646428_10 Haloacid dehalogenase-like hydrolase K07025,K20866 - 3.1.3.10 0.00000000000000000000000000000000000000000000000000000004519 209.0
BYD3_k127_6646428_11 PFAM extracellular solute-binding protein family 3 K02030,K09969,K10001 - - 0.0000000000000000000000000000000000000000000000000000001282 207.0
BYD3_k127_6646428_12 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000003909 155.0
BYD3_k127_6646428_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K11177 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016903,GO:0030151,GO:0033554,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008775 591.0
BYD3_k127_6646428_3 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 594.0
BYD3_k127_6646428_4 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K11177 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016903,GO:0030151,GO:0033554,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 482.0
BYD3_k127_6646428_5 Tripartite tricarboxylate transporter family receptor K07795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 364.0
BYD3_k127_6646428_6 COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM CutM homologs K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 325.0
BYD3_k127_6646428_7 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000852 290.0
BYD3_k127_6646428_8 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006454 277.0
BYD3_k127_6646428_9 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002281 260.0
BYD3_k127_6662332_0 cytochrome - - - 9.841e-226 714.0
BYD3_k127_6662332_1 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 599.0
BYD3_k127_6662332_10 Cytochrome C oxidase, cbb3-type, subunit III K19344 - - 0.0000000000000000000000000000002149 125.0
BYD3_k127_6662332_2 cytochrome d1 heme K19345 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 568.0
BYD3_k127_6662332_3 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 315.0
BYD3_k127_6662332_4 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 303.0
BYD3_k127_6662332_5 Cyclic nucleotide-monophosphate binding domain K21563 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005553 283.0
BYD3_k127_6662332_6 transcriptional regulator AsnC family - - - 0.00000000000000000000000000000000000000000000000000000000007343 215.0
BYD3_k127_6662332_7 overlaps another CDS with the same product name - - - 0.000000000000000000000000000000000000000000000000002701 187.0
BYD3_k127_6662332_8 - - - - 0.0000000000000000000000000000000000000000008397 158.0
BYD3_k127_6662332_9 flavin adenine dinucleotide binding - - - 0.0000000000000000000000000000000000483 147.0
BYD3_k127_6668452_0 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005101 244.0
BYD3_k127_6668452_1 ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000009238 196.0
BYD3_k127_6668452_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000359 167.0
BYD3_k127_6668452_3 Belongs to the peptidase S16 family - - - 0.00000000000000000000000000000000000114 145.0
BYD3_k127_6776471_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1078.0
BYD3_k127_6776471_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 5.813e-218 691.0
BYD3_k127_6776471_10 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000005836 189.0
BYD3_k127_6776471_11 Biopolymer transport protein K03559 - - 0.000000000000000000000000000000000000000000002005 168.0
BYD3_k127_6776471_12 - - - - 0.00000000000000000000000000000000004127 148.0
BYD3_k127_6776471_13 Belongs to the UPF0434 family K09791 - - 0.000000000000000000001341 97.0
BYD3_k127_6776471_2 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 5.708e-203 638.0
BYD3_k127_6776471_3 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 466.0
BYD3_k127_6776471_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006986 456.0
BYD3_k127_6776471_5 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 387.0
BYD3_k127_6776471_6 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 306.0
BYD3_k127_6776471_7 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 301.0
BYD3_k127_6776471_8 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002114 299.0
BYD3_k127_6776471_9 MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000225 279.0
BYD3_k127_6777522_0 Hydantoinase/oxoprolinase K01473 - 3.5.2.14 4.79e-255 807.0
BYD3_k127_6777522_1 Hydantoinase B/oxoprolinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 499.0
BYD3_k127_6777522_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 450.0
BYD3_k127_6777522_3 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 315.0
BYD3_k127_6777522_4 Isoleucyl-tRNA synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000419 320.0
BYD3_k127_6777522_5 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000002336 185.0
BYD3_k127_6777522_6 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000009762 97.0
BYD3_k127_6777522_7 mitochondrial gene expression - - - 0.0000000000007996 77.0
BYD3_k127_6782220_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008269 518.0
BYD3_k127_6782220_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 355.0
BYD3_k127_6782220_2 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 312.0
BYD3_k127_6782220_3 Permease family K03458,K16345 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005525 313.0
BYD3_k127_6782220_4 cheY-homologous receiver domain K11443 - - 0.00000000000000000000000000000000000000000000000002434 183.0
BYD3_k127_6782220_5 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000004429 164.0
BYD3_k127_6782220_6 Amino acid amide ABC transporter substrate-binding protein, HAAT family K01999 - - 0.00000000000000000000000101 106.0
BYD3_k127_6782220_7 Histidine kinase-like ATPase domain - - - 0.0000000000000000000003594 111.0
BYD3_k127_6782220_8 Belongs to the anti-sigma-factor antagonist family K06378 - - 0.000000000000002702 79.0
BYD3_k127_6814484_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.259e-224 706.0
BYD3_k127_6814484_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 635.0
BYD3_k127_6814484_2 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000004845 223.0
BYD3_k127_6814484_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000001942 119.0
BYD3_k127_6814484_4 Domain of unknown function (DUF4124) - - - 0.000000000000000000000001642 111.0
BYD3_k127_6820251_0 Secretin and TonB N terminus short domain K02453 - - 8.259e-211 685.0
BYD3_k127_6820251_1 type II secretion system protein E K02454 - - 3.412e-203 670.0
BYD3_k127_6820251_2 Type II secretion system (T2SS), protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 383.0
BYD3_k127_6820251_3 Type II secretion system (T2SS), protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000000005907 209.0
BYD3_k127_6820251_4 Transglycosylase SLT domain K08309 - - 0.000000000000000000000000000000000000000001701 166.0
BYD3_k127_6820251_5 - - - - 0.0000000000000000000000000000002599 137.0
BYD3_k127_6820251_6 - - - - 0.000000000000005481 87.0
BYD3_k127_6820251_7 carbon utilization - - - 0.0000000000001709 82.0
BYD3_k127_6831931_0 ornithine cyclodeaminase K01750 - 4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 414.0
BYD3_k127_6831931_1 Adenylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 411.0
BYD3_k127_6831931_10 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000003358 198.0
BYD3_k127_6831931_11 lipid kinase activity - - - 0.000000000000000000000000000000000000000000002286 186.0
BYD3_k127_6831931_12 Protein required for attachment to host cells - - - 0.000000000000000000007235 97.0
BYD3_k127_6831931_13 Protein of unknown function (DUF3096) - - - 0.000000000003149 67.0
BYD3_k127_6831931_2 Inner membrane protein CreD K06143 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006048 391.0
BYD3_k127_6831931_3 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 361.0
BYD3_k127_6831931_4 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000658 362.0
BYD3_k127_6831931_5 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 328.0
BYD3_k127_6831931_6 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 304.0
BYD3_k127_6831931_7 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001564 261.0
BYD3_k127_6831931_8 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000003996 258.0
BYD3_k127_6831931_9 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000007673 224.0
BYD3_k127_6880194_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07789 - - 0.0 1271.0
BYD3_k127_6880194_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789,K21133 - - 7.966e-252 795.0
BYD3_k127_6880194_10 THIoesterase K18700 - 3.1.2.29 0.00000000000000000000001661 106.0
BYD3_k127_6880194_11 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000003473 89.0
BYD3_k127_6880194_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 1.237e-211 666.0
BYD3_k127_6880194_3 CoA binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000434 544.0
BYD3_k127_6880194_4 Biotin carboxylase C-terminal domain K01941 - 6.3.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 488.0
BYD3_k127_6880194_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 443.0
BYD3_k127_6880194_6 Outer membrane efflux protein K18903 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003883 424.0
BYD3_k127_6880194_7 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 326.0
BYD3_k127_6880194_8 CoA-binding domain protein K09181 - - 0.00000000000000000000000000000000000000000000000000000000000000000001821 256.0
BYD3_k127_6880194_9 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000003251 244.0
BYD3_k127_6905908_0 Maltose acetyltransferase K00661,K03818 - 2.3.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004502 323.0
BYD3_k127_6905908_1 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 325.0
BYD3_k127_6905908_10 Carboxymuconolactone decarboxylase family - - - 0.000000000000000008422 89.0
BYD3_k127_6905908_11 Alpha/beta hydrolase family - - - 0.0000000000001226 74.0
BYD3_k127_6905908_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 313.0
BYD3_k127_6905908_3 Thiamine pyrophosphate enzyme, central domain K03852 - 2.3.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009761 304.0
BYD3_k127_6905908_4 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008384 272.0
BYD3_k127_6905908_5 Nitronate monooxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000002151 284.0
BYD3_k127_6905908_6 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003535 261.0
BYD3_k127_6905908_7 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000299 250.0
BYD3_k127_6905908_8 thiolester hydrolase activity - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000153 103.0
BYD3_k127_6905908_9 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000002722 103.0
BYD3_k127_6913789_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K22015 - 1.17.1.9,1.17.99.7 0.0 1318.0
BYD3_k127_6913789_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00122 - 1.17.1.9 4.906e-254 791.0
BYD3_k127_6925135_0 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006559 592.0
BYD3_k127_6925135_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K02182 - 6.2.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 379.0
BYD3_k127_6925135_2 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 369.0
BYD3_k127_6925135_3 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008721 309.0
BYD3_k127_6925135_4 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 291.0
BYD3_k127_6925135_5 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009128 293.0
BYD3_k127_6925135_6 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005447 287.0
BYD3_k127_6925135_7 Catalyzes the conversion of maleate to fumarate K01799,K06033 - 4.1.1.76,5.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000002946 245.0
BYD3_k127_6925135_8 Type IV pilus biogenesis stability protein PilW - - - 0.0000000000000000000000000000002747 128.0
BYD3_k127_693555_0 Psort location Cytoplasmic, score 7.50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008162 408.0
BYD3_k127_693555_1 taurine catabolism dioxygenase K03119 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 354.0
BYD3_k127_693555_2 Belongs to the ABC transporter superfamily K02010,K02052 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007146 327.0
BYD3_k127_693555_3 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000000000000000006819 258.0
BYD3_k127_693555_4 Pfam:Methyltransf_6 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001153 251.0
BYD3_k127_693555_5 ABC transporter (Permease K02053 - - 0.00000000000000000000000000000000000000000000000007573 188.0
BYD3_k127_693555_6 Domain of unknown function (DUF5060) - - - 0.0000000000000000000008596 107.0
BYD3_k127_6967679_0 O-methyltransferase activity - - - 2.721e-200 655.0
BYD3_k127_6967679_1 LemA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 303.0
BYD3_k127_6967679_2 SMART ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 291.0
BYD3_k127_6967679_3 COG1512 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.00000000000000000000000000000000000000000000000000000000000001271 228.0
BYD3_k127_6967679_4 Pfam:TPM - - - 0.0000000000000000000000000000000000000000000000003903 188.0
BYD3_k127_6967679_5 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000004791 189.0
BYD3_k127_6970979_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 521.0
BYD3_k127_6970979_1 - - - - 0.0000000000000000002405 92.0
BYD3_k127_6970979_2 PFAM Ankyrin K06867 - - 0.0000002981 59.0
BYD3_k127_6992660_0 PFAM extracellular solute-binding protein family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 478.0
BYD3_k127_6992660_1 Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 423.0
BYD3_k127_6992660_2 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 383.0
BYD3_k127_6992660_3 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 377.0
BYD3_k127_6992660_4 Bacterial PH domain - - - 0.00000000000000000000000000007125 121.0
BYD3_k127_7005283_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 2.04e-261 819.0
BYD3_k127_7005283_1 Alpha/beta hydrolase of unknown function (DUF1100) - - - 0.0000000000000000000000000000000000000000000000000000000000001337 229.0
BYD3_k127_7005283_2 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000001886 210.0
BYD3_k127_7005283_3 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000002228 142.0
BYD3_k127_7005283_4 Pfam Glutaredoxin - - - 0.000000000000000000000000000008974 125.0
BYD3_k127_7005283_5 Protein of unknown function (DUF2846) - - - 0.000003938 55.0
BYD3_k127_7015177_0 4Fe-4S dicluster domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 516.0
BYD3_k127_7015177_1 FAD binding domain K11472 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 403.0
BYD3_k127_7015177_2 Glycolate oxidase subunit GlcD K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009163 391.0
BYD3_k127_7015177_3 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001143 274.0
BYD3_k127_7015177_4 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002711 275.0
BYD3_k127_7015177_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000004582 76.0
BYD3_k127_7025944_0 Aminotransferase class-V K00839 - 2.6.1.112 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 587.0
BYD3_k127_7025944_1 hydrolases or acyltransferases, alpha beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 579.0
BYD3_k127_7025944_2 Belongs to the peptidase S1B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 553.0
BYD3_k127_7025944_3 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005144 514.0
BYD3_k127_7025944_4 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006564 401.0
BYD3_k127_7025944_5 Membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005665 364.0
BYD3_k127_7025944_6 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002228 301.0
BYD3_k127_7025944_7 Luciferase family - - - 0.0000000000000000000000000000000000000000000000000000001101 198.0
BYD3_k127_7025944_8 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000003495 205.0
BYD3_k127_7025944_9 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000002932 199.0
BYD3_k127_706989_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 2.174e-212 686.0
BYD3_k127_706989_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 531.0
BYD3_k127_706989_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.1.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 446.0
BYD3_k127_706989_3 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007751 421.0
BYD3_k127_706989_4 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006817 368.0
BYD3_k127_706989_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 314.0
BYD3_k127_706989_6 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000001954 190.0
BYD3_k127_706989_7 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000003339 116.0
BYD3_k127_706989_8 Cupin 2, conserved barrel domain protein - - - 0.0008503 49.0
BYD3_k127_7089043_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1070.0
BYD3_k127_7089043_1 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121 365.0
BYD3_k127_7089043_2 Domain of unknown function (DUF2437) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 323.0
BYD3_k127_7089043_3 COG2202 FOG PAS PAC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 315.0
BYD3_k127_7089043_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001952 270.0
BYD3_k127_7089043_5 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000008945 255.0
BYD3_k127_7089043_6 LuxR family transcriptional regulator K13041 - - 0.0000000000000000000000000000000000000000000000000000001008 220.0
BYD3_k127_7089043_7 - - - - 0.0000000000000000000000000000000000000000000000000003238 191.0
BYD3_k127_7089043_8 rubredoxin - - - 0.0000000000000000001342 100.0
BYD3_k127_7089043_9 Trypsin - - - 0.0007132 48.0
BYD3_k127_7093530_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008711 548.0
BYD3_k127_7093530_1 cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 374.0
BYD3_k127_7093530_2 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 344.0
BYD3_k127_7093530_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002397 260.0
BYD3_k127_7093530_4 - - - - 0.000000001097 59.0
BYD3_k127_7151836_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 1.308e-236 756.0
BYD3_k127_7151836_1 Metal-sensitive transcriptional repressor K21600 - - 0.000000000000000000000000001689 115.0
BYD3_k127_7151836_2 Heavy metal transport detoxification protein K07213 - - 0.0000000000000002021 80.0
BYD3_k127_7151836_3 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 0.000000000000001897 76.0
BYD3_k127_7157328_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1220.0
BYD3_k127_7157328_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 572.0
BYD3_k127_7157328_10 Integral membrane protein (intg_mem_TP0381) - - - 0.00000000000000000000000000000000000001773 153.0
BYD3_k127_7157328_11 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000168 108.0
BYD3_k127_7157328_13 RecX family K03565 - - 0.0000000000000000001182 96.0
BYD3_k127_7157328_2 Multidrug ABC transporter ATP-binding protein K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 472.0
BYD3_k127_7157328_3 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 430.0
BYD3_k127_7157328_4 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 416.0
BYD3_k127_7157328_5 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 342.0
BYD3_k127_7157328_6 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004262 332.0
BYD3_k127_7157328_7 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000002154 199.0
BYD3_k127_7157328_8 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000004377 180.0
BYD3_k127_7157328_9 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000003648 169.0
BYD3_k127_7233060_0 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K11177 - 1.17.1.4 5.775e-268 844.0
BYD3_k127_7233060_1 peptidase, M20 - - - 4.293e-194 616.0
BYD3_k127_7233060_2 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004429 310.0
BYD3_k127_7233060_3 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000001038 224.0
BYD3_k127_7233060_4 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000000000000000000000143 214.0
BYD3_k127_7233060_5 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000004426 179.0
BYD3_k127_7253198_0 Transcriptional regulatory protein, C terminal K02483,K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007217 274.0
BYD3_k127_7253198_1 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000001005 89.0
BYD3_k127_727020_0 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000853 515.0
BYD3_k127_727020_1 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 406.0
BYD3_k127_727020_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003712 258.0
BYD3_k127_7274357_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 2.237e-206 650.0
BYD3_k127_7274357_1 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 518.0
BYD3_k127_7274357_2 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 434.0
BYD3_k127_7274357_3 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000002853 261.0
BYD3_k127_7274357_4 4TM region of pyridine nucleotide transhydrogenase, mitoch K00322,K00324 - 1.6.1.1,1.6.1.2 0.0000000000000000000000000000000000000000006624 159.0
BYD3_k127_7314001_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 2.948e-312 979.0
BYD3_k127_7314001_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 3.077e-242 758.0
BYD3_k127_7314001_10 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000007012 230.0
BYD3_k127_7314001_11 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000003981 201.0
BYD3_k127_7314001_12 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000000000000006963 164.0
BYD3_k127_7314001_13 Phosphoglycerate mutase family K08296 - - 0.0000000000000000000000000000000000000000001425 164.0
BYD3_k127_7314001_14 Inositol monophosphatase family K01082,K01092 - 3.1.3.25,3.1.3.7 0.000000000000001092 81.0
BYD3_k127_7314001_2 Soluble lytic murein transglycosylase L domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 590.0
BYD3_k127_7314001_3 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 567.0
BYD3_k127_7314001_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005571 576.0
BYD3_k127_7314001_5 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 561.0
BYD3_k127_7314001_6 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009262 405.0
BYD3_k127_7314001_7 CHAD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 324.0
BYD3_k127_7314001_8 Saccharopine dehydrogenase NADP binding domain K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 306.0
BYD3_k127_7314001_9 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006749 296.0
BYD3_k127_7344945_0 COG2148 Sugar transferases involved in lipopolysaccharide synthesis K03606 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006301 467.0
BYD3_k127_7344945_1 Chain length determinant protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008168 403.0
BYD3_k127_7344945_10 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000006046 205.0
BYD3_k127_7344945_11 PPIC-type PPIASE domain - - - 0.0000000000000000000000000000000000000000000000000002471 199.0
BYD3_k127_7344945_12 Glycosyltransferase like family 2 K13002 - - 0.0000000000000000000000000000000000000000002509 168.0
BYD3_k127_7344945_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004969 320.0
BYD3_k127_7344945_3 PFAM Glycosyl hydrolases family 39 K21000 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 322.0
BYD3_k127_7344945_4 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 316.0
BYD3_k127_7344945_5 eight transmembrane protein EpsH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 319.0
BYD3_k127_7344945_6 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000819 295.0
BYD3_k127_7344945_7 Polysaccharide biosynthesis/export protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002589 269.0
BYD3_k127_7344945_8 Protein of unknown function (DUF3485) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007354 271.0
BYD3_k127_7344945_9 O-Antigen ligase - - - 0.00000000000000000000000000000000000000000000000000000000000316 232.0
BYD3_k127_7350997_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 6.209e-212 668.0
BYD3_k127_7350997_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 621.0
BYD3_k127_7350997_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 482.0
BYD3_k127_7350997_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005111 410.0
BYD3_k127_7350997_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007017 313.0
BYD3_k127_7350997_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002585 289.0
BYD3_k127_7350997_6 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002411 265.0
BYD3_k127_7350997_7 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000002221 206.0
BYD3_k127_7350997_8 - - - - 0.0000000000582 64.0
BYD3_k127_735944_0 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 303.0
BYD3_k127_735944_1 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 316.0
BYD3_k127_735944_2 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000675 260.0
BYD3_k127_735944_3 PFAM DoxX family protein K15977 - - 0.000000000000000000000000000000000000000001518 159.0
BYD3_k127_7379234_0 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 511.0
BYD3_k127_7379234_1 III protein, CoA-transferase family K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 487.0
BYD3_k127_7379234_10 Converts GTP to 7,8-dihydroneopterin triphosphate K01495,K09007 - 3.5.4.16 0.0000003559 55.0
BYD3_k127_7379234_11 Anti sigma-E protein RseA K03597 - - 0.0005076 46.0
BYD3_k127_7379234_2 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 323.0
BYD3_k127_7379234_3 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 297.0
BYD3_k127_7379234_4 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000004253 226.0
BYD3_k127_7379234_5 COG1247 Sortase and related acyltransferases K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000000000000003845 210.0
BYD3_k127_7379234_6 sensor histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000001129 228.0
BYD3_k127_7379234_7 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000000000000000000000000000000000000000000000003571 194.0
BYD3_k127_7379234_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000001697 189.0
BYD3_k127_7379234_9 Malonate decarboxylase K13933 - 4.1.1.87 0.00000000000006631 82.0
BYD3_k127_7418108_0 AMP-binding enzyme C-terminal domain K00666 - - 4.201e-263 820.0
BYD3_k127_7418108_1 von Willebrand factor (vWF) type A domain - - - 1.147e-215 707.0
BYD3_k127_7418108_10 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 305.0
BYD3_k127_7418108_11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000008195 99.0
BYD3_k127_7418108_12 AMP-binding enzyme C-terminal domain K00666,K02182 - 6.2.1.48 0.0007745 42.0
BYD3_k127_7418108_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 2.251e-211 665.0
BYD3_k127_7418108_3 Major Facilitator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 523.0
BYD3_k127_7418108_4 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 446.0
BYD3_k127_7418108_5 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009887 422.0
BYD3_k127_7418108_6 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 408.0
BYD3_k127_7418108_7 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 362.0
BYD3_k127_7418108_8 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003326 354.0
BYD3_k127_7418108_9 Class ii aldolase K01628,K03077 - 4.1.2.17,5.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 347.0
BYD3_k127_7418428_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1150.0
BYD3_k127_7418428_1 type I secretion outer membrane protein, TolC K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 463.0
BYD3_k127_7418428_2 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009048 462.0
BYD3_k127_7418428_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004675 375.0
BYD3_k127_7418428_4 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 303.0
BYD3_k127_7418428_5 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000002497 264.0
BYD3_k127_7418428_6 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000009669 211.0
BYD3_k127_7418428_7 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000008237 194.0
BYD3_k127_7418428_8 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000004227 175.0
BYD3_k127_746065_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 1.895e-198 629.0
BYD3_k127_746065_1 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 648.0
BYD3_k127_746065_2 Lipocalin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 317.0
BYD3_k127_746065_3 COG1136 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000009305 239.0
BYD3_k127_7464962_0 ABC transporter K06147,K18893 - - 6.625e-263 824.0
BYD3_k127_7464962_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 595.0
BYD3_k127_7464962_2 Amidohydrolase family K01485 - 3.5.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 420.0
BYD3_k127_7464962_3 PFAM Taurine catabolism dioxygenase TauD, TfdA family K06912 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 364.0
BYD3_k127_7464962_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 316.0
BYD3_k127_7464962_5 Dehydrogenase K00031,K00052,K07246 GO:0006082,GO:0006575,GO:0006732,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016053,GO:0019297,GO:0019298,GO:0019752,GO:0032787,GO:0042398,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576 1.1.1.42,1.1.1.83,1.1.1.85,1.1.1.93,4.1.1.73 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 294.0
BYD3_k127_7464962_6 extra-cytoplasmic solute receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002982 261.0
BYD3_k127_7464962_7 - - - - 0.0000000000000000002721 91.0
BYD3_k127_7464962_8 Pfam Ankyrin K06867 - - 0.0000000000000003145 89.0
BYD3_k127_7479162_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1576.0
BYD3_k127_7479162_1 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1184.0
BYD3_k127_7479162_10 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 317.0
BYD3_k127_7479162_11 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 312.0
BYD3_k127_7479162_12 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006503 263.0
BYD3_k127_7479162_13 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001657 264.0
BYD3_k127_7479162_14 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000414 249.0
BYD3_k127_7479162_15 Peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000006696 248.0
BYD3_k127_7479162_16 e1 component (alpha subunit) K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000003843 234.0
BYD3_k127_7479162_17 SelR domain K07305,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000005251 216.0
BYD3_k127_7479162_18 Glutathione S-transferase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000001223 205.0
BYD3_k127_7479162_19 protocatechuate 3,4-dioxygenase, alpha K00448 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000002625 210.0
BYD3_k127_7479162_2 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 507.0
BYD3_k127_7479162_20 NUDIX domain - - - 0.000000000000000000000000000000000000000000000006046 188.0
BYD3_k127_7479162_21 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000001385 136.0
BYD3_k127_7479162_22 - - - - 0.000000000000000000000000003104 114.0
BYD3_k127_7479162_23 Belongs to the BolA IbaG family K05527 - - 0.00000000000000000001238 102.0
BYD3_k127_7479162_3 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 492.0
BYD3_k127_7479162_4 PFAM Transketolase central region K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 481.0
BYD3_k127_7479162_5 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 440.0
BYD3_k127_7479162_6 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 427.0
BYD3_k127_7479162_7 PFAM isocitrate isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 365.0
BYD3_k127_7479162_8 Protocatechuate 3,4-dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 355.0
BYD3_k127_7479162_9 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004573 320.0
BYD3_k127_7486211_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 4.398e-267 850.0
BYD3_k127_7486211_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006729 446.0
BYD3_k127_7486211_2 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004924 447.0
BYD3_k127_7486211_3 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005096 350.0
BYD3_k127_7486211_4 Tetrapyrrole (Corrin/Porphyrin) Methylases K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000006489 252.0
BYD3_k127_7486211_5 HAD-superfamily hydrolase K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000003626 251.0
BYD3_k127_7486211_6 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000009002 219.0
BYD3_k127_7486211_7 TIGRFAM maf protein K06287 - - 0.0000000000000000000000000000000000000000000000000000005665 199.0
BYD3_k127_7486211_8 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000000000001183 115.0
BYD3_k127_7486211_9 metal-binding, possibly nucleic acid-binding protein K07040 - - 0.000000000000000000000000003216 117.0
BYD3_k127_7498548_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 607.0
BYD3_k127_7498548_1 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003849 589.0
BYD3_k127_7498548_11 CHRD domain - - - 0.00000000000000000000000000000000000007037 152.0
BYD3_k127_7498548_12 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000001635 111.0
BYD3_k127_7498548_13 Histidine phosphatase superfamily (branch 1) K08296 - - 0.00000000000002347 80.0
BYD3_k127_7498548_14 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000005895 58.0
BYD3_k127_7498548_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006882 344.0
BYD3_k127_7498548_3 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 317.0
BYD3_k127_7498548_4 2-keto-3-deoxy-L-rhamnonate aldolase activity K01630,K02510 - 4.1.2.20,4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 309.0
BYD3_k127_7498548_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 299.0
BYD3_k127_7498548_6 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000847 287.0
BYD3_k127_7498548_7 enzyme of poly-gamma-glutamate biosynthesis (Capsule formation) K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003499 261.0
BYD3_k127_7498548_8 Amidohydrolase K03392,K22213 - 4.1.1.45,4.1.1.52 0.000000000000000000000000000000000000000000000000000000000000000294 237.0
BYD3_k127_7498548_9 HNH nucleases - - - 0.000000000000000000000000000000000000000000000000000006615 192.0
BYD3_k127_7524884_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 543.0
BYD3_k127_7524884_1 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008165 535.0
BYD3_k127_7524884_2 C4-dicarboxylate ABC transporter permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007994 286.0
BYD3_k127_7524884_3 regulatory protein LysR - - - 0.00000000000000000000000000000000000000000000003289 179.0
BYD3_k127_7524884_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000007773 162.0
BYD3_k127_7531947_0 4Fe-4S dicluster domain - - - 0.0 1292.0
BYD3_k127_7531947_1 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 438.0
BYD3_k127_7531947_2 Aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 351.0
BYD3_k127_7531947_3 Belongs to the SUA5 family K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 333.0
BYD3_k127_7531947_4 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000003059 241.0
BYD3_k127_7531947_5 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000076 238.0
BYD3_k127_7531947_6 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000003354 223.0
BYD3_k127_7531947_7 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000614 213.0
BYD3_k127_7531947_8 helix_turn_helix, Lux Regulon - - - 0.00000000000000000004431 94.0
BYD3_k127_7537003_0 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005303 322.0
BYD3_k127_7537003_1 membrane-bound metal-dependent K07038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007586 319.0
BYD3_k127_7537003_2 phosphoserine phosphatase K01079 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 293.0
BYD3_k127_7537003_3 Scaffold protein Nfu/NifU N terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002103 263.0
BYD3_k127_7537003_4 NifU-like N terminal domain K04488 - - 0.000000000000000000000000000000000000000000000000000000000597 214.0
BYD3_k127_7537003_5 Rieske 2Fe-2S K05710 - - 0.000000000000000000000000000000000000000002158 158.0
BYD3_k127_7537003_6 transferase activity, transferring acyl groups K14658,K17840,K18815 - 2.3.1.59,2.3.1.82 0.000000000000000000000000000000000001115 154.0
BYD3_k127_7571380_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007929 464.0
BYD3_k127_7571380_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000578 325.0
BYD3_k127_7571380_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003341 264.0
BYD3_k127_7571380_3 PFAM thioesterase superfamily protein K07107 - - 0.000000000000000000000000000000000000000000000002101 192.0
BYD3_k127_7656599_0 PFAM carboxyl transferase K01969 - 6.4.1.4 3.76e-256 801.0
BYD3_k127_7656599_1 Thi4 family - - - 6.602e-228 717.0
BYD3_k127_7656599_10 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 296.0
BYD3_k127_7656599_11 Cation efflux family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000188 289.0
BYD3_k127_7656599_12 Enoyl-CoA hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001452 256.0
BYD3_k127_7656599_13 Enoyl-CoA hydratase/isomerase K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000001368 262.0
BYD3_k127_7656599_14 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000002041 220.0
BYD3_k127_7656599_15 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000003912 231.0
BYD3_k127_7656599_16 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000003924 209.0
BYD3_k127_7656599_17 Protein of unknown function (DUF2889) - - - 0.0000000000000000000000000000000000000000000000002213 183.0
BYD3_k127_7656599_18 Protein of unknown function (DUF2889) - - - 0.0000000000000000000000000000000000000000000000008434 182.0
BYD3_k127_7656599_19 Protein of unknown function (DUF3299) K09950 - - 0.00000000000000000000000000000000000002402 155.0
BYD3_k127_7656599_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 6.924e-219 686.0
BYD3_k127_7656599_20 PFAM amidohydrolase - - - 0.0000000000000000000000000002391 122.0
BYD3_k127_7656599_21 - - - - 0.00000000000000000000000141 108.0
BYD3_k127_7656599_23 - - - - 0.00000000002255 68.0
BYD3_k127_7656599_24 - - - - 0.000005833 55.0
BYD3_k127_7656599_25 Glycine zipper 2TM domain - - - 0.0008836 48.0
BYD3_k127_7656599_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 580.0
BYD3_k127_7656599_4 Sulfurtransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007315 584.0
BYD3_k127_7656599_5 Amidohydrolase family K01485 - 3.5.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 541.0
BYD3_k127_7656599_6 Uncharacterised MFS-type transporter YbfB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004692 470.0
BYD3_k127_7656599_7 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 398.0
BYD3_k127_7656599_8 COG0119 Isopropylmalate homocitrate citramalate synthases K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 401.0
BYD3_k127_7656599_9 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 308.0
BYD3_k127_7714727_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 8.734e-272 847.0
BYD3_k127_7714727_1 protein conserved in bacteria K09989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 589.0
BYD3_k127_7714727_2 AAA domain (Cdc48 subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009164 479.0
BYD3_k127_7714727_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 459.0
BYD3_k127_7714727_4 FAD linked oxidase K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 387.0
BYD3_k127_7714727_5 Peptidase C13 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009853 273.0
BYD3_k127_7714727_6 Ammonium transporter K03320,K06580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006794 242.0
BYD3_k127_7714727_7 MobA-Related Protein K07141 - 2.7.7.76 0.000000000000000000000000000000000000000000000000001049 190.0
BYD3_k127_7714727_8 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000008094 108.0
BYD3_k127_773082_0 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 415.0
BYD3_k127_773082_1 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01577,K01652,K03852 - 2.2.1.6,2.3.3.15,4.1.1.8 0.00000000000000000000000000000000000000000000000000000000000000000004097 240.0
BYD3_k127_7738415_0 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 354.0
BYD3_k127_7738415_1 Histidine kinase K05962 - 2.7.13.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005824 331.0
BYD3_k127_7738415_10 Amidohydrolase K07045 - - 0.00000000002354 65.0
BYD3_k127_7738415_2 Molybdate ABC transporter permease K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 306.0
BYD3_k127_7738415_3 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 287.0
BYD3_k127_7738415_4 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002009 253.0
BYD3_k127_7738415_5 ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000001353 239.0
BYD3_k127_7738415_6 abc transporter K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000848 231.0
BYD3_k127_7738415_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000006971 198.0
BYD3_k127_7738415_8 endonuclease exonuclease phosphatase - - - 0.00000000000000009612 94.0
BYD3_k127_7738415_9 - - - - 0.000000000000001735 82.0
BYD3_k127_7757576_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K15408 - 1.9.3.1 0.0 1131.0
BYD3_k127_7757576_1 PFAM glycoside hydrolase 15-related - - - 1.181e-252 792.0
BYD3_k127_7757576_10 DNA-binding protein with PD1-like DNA-binding motif K06934 - - 0.00000000000000000000000000000000000000000001861 181.0
BYD3_k127_7757576_11 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000008773 167.0
BYD3_k127_7757576_12 - - - - 0.000000000000000000000000000000000000001724 153.0
BYD3_k127_7757576_13 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000004438 137.0
BYD3_k127_7757576_14 Cytochrome c - - - 0.0000000000000000000000000000003285 130.0
BYD3_k127_7757576_15 - - - - 0.0000000000000000000000000006517 120.0
BYD3_k127_7757576_16 - - - - 0.000000000000000007567 91.0
BYD3_k127_7757576_17 lactoylglutathione lyase activity - - - 0.00000000000102 75.0
BYD3_k127_7757576_19 Domain of unknown function (DUF4440) - - - 0.0000000003827 66.0
BYD3_k127_7757576_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 495.0
BYD3_k127_7757576_20 Protein of unknown function (DUF1264) - - - 0.00000001284 57.0
BYD3_k127_7757576_21 Histidine kinase K02484,K07645 - 2.7.13.3 0.000877 44.0
BYD3_k127_7757576_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006558 445.0
BYD3_k127_7757576_4 Malate/L-lactate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 368.0
BYD3_k127_7757576_5 cytochrome c oxidase (Subunit II) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 331.0
BYD3_k127_7757576_6 Predicted membrane protein (DUF2254) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006554 338.0
BYD3_k127_7757576_7 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 336.0
BYD3_k127_7757576_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 316.0
BYD3_k127_7757576_9 Transcriptional regulatory protein, C terminal K02483,K07666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003173 271.0
BYD3_k127_78129_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 2.962e-248 772.0
BYD3_k127_78129_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 1.038e-213 677.0
BYD3_k127_78129_10 GDSL-like Lipase/Acylhydrolase - - - 0.0000000000000000000000000000000000000002954 164.0
BYD3_k127_78129_11 Dioxygenase - - - 0.00000000000000000000003407 110.0
BYD3_k127_78129_12 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000003735 93.0
BYD3_k127_78129_13 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000002864 83.0
BYD3_k127_78129_2 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 2.845e-199 632.0
BYD3_k127_78129_3 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000821 536.0
BYD3_k127_78129_4 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 469.0
BYD3_k127_78129_5 Methylenetetrahydrofolate reductase K00297 GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 437.0
BYD3_k127_78129_6 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009772 393.0
BYD3_k127_78129_7 Diguanylate cyclase K02488 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 372.0
BYD3_k127_78129_8 Belongs to the GST superfamily K11209 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 343.0
BYD3_k127_78129_9 KR domain K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008559 314.0
BYD3_k127_7844731_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 481.0
BYD3_k127_7844731_1 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 407.0
BYD3_k127_7844731_2 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 359.0
BYD3_k127_7844731_3 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001187 296.0
BYD3_k127_7844731_4 Histidine kinase K10125 - 2.7.13.3 0.00001668 54.0
BYD3_k127_7865133_0 membrane-bound lytic murein transglycosylase K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 458.0
BYD3_k127_7865133_1 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 351.0
BYD3_k127_7865133_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000002299 266.0
BYD3_k127_7865133_3 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000007705 251.0
BYD3_k127_7865133_4 ApaG domain K06195 - - 0.00000000000000000000000000000000000000000000000000000345 192.0
BYD3_k127_7868585_0 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 1.844e-194 616.0
BYD3_k127_7868585_1 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 552.0
BYD3_k127_7868585_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000006055 225.0
BYD3_k127_7868585_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000001779 98.0
BYD3_k127_7876677_0 Histidine kinase A domain protein - - - 0.0 1237.0
BYD3_k127_7876677_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1047.0
BYD3_k127_7876677_2 Exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005843 339.0
BYD3_k127_7876677_3 Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000002417 168.0
BYD3_k127_7876677_4 - - - - 0.0000000000000000001167 90.0
BYD3_k127_7876677_5 UPF0114 protein - - - 0.0000000002637 63.0
BYD3_k127_7910425_0 FAD binding domain K00480,K14974 - 1.14.13.1,1.14.13.114 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007243 437.0
BYD3_k127_7910425_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 330.0
BYD3_k127_7910425_2 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005438 298.0
BYD3_k127_7910425_3 dehydratase - - - 0.000000000000000000000000000000002007 139.0
BYD3_k127_7953371_0 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 6.287e-254 817.0
BYD3_k127_7953371_1 Belongs to the citrate synthase family K01647,K01659 - 2.3.3.1,2.3.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000989 581.0
BYD3_k127_7953371_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 369.0
BYD3_k127_7953371_3 (ABC) transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 352.0
BYD3_k127_7953371_4 phosphate acetyltransferase K00625 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 336.0
BYD3_k127_7953371_5 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000000000000003438 193.0
BYD3_k127_7953371_6 Belongs to the universal stress protein A family - - - 0.0000000000003921 75.0
BYD3_k127_7954295_0 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 512.0
BYD3_k127_7954295_1 TIGRFAM outer membrane autotransporter barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 520.0
BYD3_k127_7960843_0 N-methylhydantoinase A acetone carboxylase, beta subunit K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 624.0
BYD3_k127_7960843_1 N-methylhydantoinase B acetone carboxylase alpha subunit K01474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0017168,GO:0034641,GO:0043603,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0071704,GO:1901564 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 481.0
BYD3_k127_7960843_2 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 338.0
BYD3_k127_7960843_3 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 298.0
BYD3_k127_7960843_4 deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004216 250.0
BYD3_k127_7960843_5 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000001482 205.0
BYD3_k127_7960843_6 Maleate cis-trans isomerase K01799 - 5.2.1.1 0.00009243 46.0
BYD3_k127_7991342_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 3.584e-246 774.0
BYD3_k127_7991342_1 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 1.676e-240 749.0
BYD3_k127_7991342_10 Histidine kinase K14986 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000002821 230.0
BYD3_k127_7991342_11 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000008174 194.0
BYD3_k127_7991342_12 ribosomal large subunit export from nucleus - - - 0.0000000000000000000000000000000000000000000000002042 183.0
BYD3_k127_7991342_13 Archease protein family (MTH1598/TM1083) - - - 0.000000000000000000000000000000000000000000000005751 191.0
BYD3_k127_7991342_14 PFAM Signal transduction response regulator, receiver K13041 - - 0.000000000000000000000000000000000000000002264 179.0
BYD3_k127_7991342_15 CoA binding domain - - - 0.0000000000000000000000000000000001399 141.0
BYD3_k127_7991342_16 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000001633 136.0
BYD3_k127_7991342_17 PFAM zinc finger, DksA TraR C4-type - - - 0.00000000000000000000000003542 113.0
BYD3_k127_7991342_18 AAA domain - - - 0.0000000000000000000000008172 109.0
BYD3_k127_7991342_19 - - - - 0.000000000000000276 83.0
BYD3_k127_7991342_2 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004032 526.0
BYD3_k127_7991342_20 Nucleotidyl transferase - - - 0.00000000000000116 79.0
BYD3_k127_7991342_21 - - - - 0.000000000003151 78.0
BYD3_k127_7991342_22 N-terminal domain of ribose phosphate pyrophosphokinase K00948 - 2.7.6.1 0.000000002353 68.0
BYD3_k127_7991342_3 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 464.0
BYD3_k127_7991342_4 dehydrogenase, E1 component K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 446.0
BYD3_k127_7991342_5 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 403.0
BYD3_k127_7991342_6 PFAM Transketolase central region K00162,K21417 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007038 377.0
BYD3_k127_7991342_7 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005866 276.0
BYD3_k127_7991342_8 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000000000000000000000000000000000000000000000000000000005087 222.0
BYD3_k127_7991342_9 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000001656 216.0
BYD3_k127_8012573_0 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 407.0
BYD3_k127_8012573_1 beta-keto acid cleavage enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000882 374.0
BYD3_k127_8012573_2 Short-chain dehydrogenase reductase sdr - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002063 254.0
BYD3_k127_8012573_3 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000001124 247.0
BYD3_k127_8012573_4 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000001155 240.0
BYD3_k127_8012573_5 Tripartite tricarboxylate transporter family receptor K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000003188 244.0
BYD3_k127_8012573_6 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07811,K08351 - 1.7.2.3 0.0000000000000000001182 91.0
BYD3_k127_8012573_7 - - - - 0.00000000136 69.0
BYD3_k127_8012573_8 ABC transporter substrate binding protein K01989 - - 0.0001328 53.0
BYD3_k127_8013082_0 O-methyltransferase activity - - - 1.156e-218 711.0
BYD3_k127_8013082_1 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 447.0
BYD3_k127_8013082_2 4-phosphoerythronate dehydrogenase activity K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 350.0
BYD3_k127_8013082_3 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 344.0
BYD3_k127_8013082_4 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 316.0
BYD3_k127_8013082_5 PFAM intradiol ring-cleavage dioxygenase K04098 - 1.13.11.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 309.0
BYD3_k127_8013082_6 Catalyzes the NAD( )-dependent oxidative deamination of L-alanine to pyruvate, and the reverse reaction, the reductive amination of pyruvate K01750,K19244 - 1.4.1.1,4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 308.0
BYD3_k127_8013082_7 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000004078 135.0
BYD3_k127_8028571_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 8.621e-269 846.0
BYD3_k127_8028571_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 2.654e-222 694.0
BYD3_k127_8028571_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 5.06e-208 656.0
BYD3_k127_8028571_3 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006251 271.0
BYD3_k127_8028571_4 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000000000000000002576 204.0
BYD3_k127_8028571_5 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000004521 204.0
BYD3_k127_8028571_6 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 0.000000000000000000000000000000000000000000000001573 173.0
BYD3_k127_8028571_7 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000000000000006291 132.0
BYD3_k127_8028571_8 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.000000000005401 76.0
BYD3_k127_8031873_0 Bacterial protein of unknown function (DUF839) K07093 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 609.0
BYD3_k127_8031873_1 PFAM MOFRL domain protein K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 579.0
BYD3_k127_8031873_10 peptidase dimerisation domain protein K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 313.0
BYD3_k127_8031873_11 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 298.0
BYD3_k127_8031873_12 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003745 278.0
BYD3_k127_8031873_13 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001644 279.0
BYD3_k127_8031873_14 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009248 265.0
BYD3_k127_8031873_15 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002204 254.0
BYD3_k127_8031873_16 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000007679 242.0
BYD3_k127_8031873_17 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000002861 235.0
BYD3_k127_8031873_2 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 554.0
BYD3_k127_8031873_3 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 498.0
BYD3_k127_8031873_4 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 503.0
BYD3_k127_8031873_5 Polysaccharide deacetylase K01452 - 3.5.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 496.0
BYD3_k127_8031873_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 415.0
BYD3_k127_8031873_7 Lactonase, 7-bladed beta-propeller K07404 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 385.0
BYD3_k127_8031873_8 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 379.0
BYD3_k127_8031873_9 Transcriptional regulatory protein, C terminal K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 344.0
BYD3_k127_8053146_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.304e-307 956.0
BYD3_k127_8053146_1 NADH Ubiquinone plastoquinone (Complex I) K12141 - - 4.817e-250 789.0
BYD3_k127_8053146_10 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004975 459.0
BYD3_k127_8053146_11 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 377.0
BYD3_k127_8053146_12 Nucleoside H+ symporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 359.0
BYD3_k127_8053146_13 hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 317.0
BYD3_k127_8053146_14 NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008614 269.0
BYD3_k127_8053146_15 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000004055 250.0
BYD3_k127_8053146_16 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000000003801 196.0
BYD3_k127_8053146_17 Psort location Extracellular, score - - - 0.0000000000000000000000000000000009708 139.0
BYD3_k127_8053146_18 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.0000000000000000000000002948 110.0
BYD3_k127_8053146_19 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.00003024 47.0
BYD3_k127_8053146_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 8.668e-238 742.0
BYD3_k127_8053146_3 NADH ubiquinone plastoquinone (Complex I) - - - 1.16e-228 731.0
BYD3_k127_8053146_4 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 3.343e-204 670.0
BYD3_k127_8053146_5 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 3.105e-200 629.0
BYD3_k127_8053146_6 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 1.675e-197 625.0
BYD3_k127_8053146_7 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 537.0
BYD3_k127_8053146_8 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 479.0
BYD3_k127_8053146_9 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 466.0
BYD3_k127_8087117_0 COG4770 Acetyl propionyl-CoA carboxylase, alpha subunit - - - 1.15e-239 754.0
BYD3_k127_8087117_1 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0017076,GO:0017111,GO:0019001,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046906,GO:0047727,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564 5.4.99.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 583.0
BYD3_k127_8087117_2 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 366.0
BYD3_k127_8087117_3 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000001272 250.0
BYD3_k127_8087117_4 COG0346 Lactoylglutathione lyase and related lyases K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000005248 237.0
BYD3_k127_8103428_0 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 9.282e-314 984.0
BYD3_k127_8103428_1 chain 5 L K00341 - 1.6.5.3 4.631e-294 915.0
BYD3_k127_8103428_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 308.0
BYD3_k127_8103428_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001266 278.0
BYD3_k127_8103428_12 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001727 256.0
BYD3_k127_8103428_13 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000007768 241.0
BYD3_k127_8103428_14 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000000007019 207.0
BYD3_k127_8103428_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000004861 198.0
BYD3_k127_8103428_16 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000000005158 199.0
BYD3_k127_8103428_17 self proteolysis - - - 0.000000000000000000000000000000000000000000000000003616 190.0
BYD3_k127_8103428_18 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000002705 176.0
BYD3_k127_8103428_19 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.000000000000000000000000000000000000000000001563 171.0
BYD3_k127_8103428_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 3.744e-252 781.0
BYD3_k127_8103428_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000000000001204 164.0
BYD3_k127_8103428_21 Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000000000003469 131.0
BYD3_k127_8103428_22 Class I peptide chain release factor K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.0000000000000000000000000000001227 131.0
BYD3_k127_8103428_23 TIGRFAM RHS repeat-associated core domain - - - 0.0000000000004933 70.0
BYD3_k127_8103428_24 TIGRFAM YD repeat protein - - - 0.00000000008365 69.0
BYD3_k127_8103428_25 dihydropteroate synthase K00796 - 2.5.1.15 0.000000000222 62.0
BYD3_k127_8103428_26 Protein of unknown function (DUF465) - - - 0.000000001225 62.0
BYD3_k127_8103428_3 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 1.767e-235 738.0
BYD3_k127_8103428_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 2.729e-230 720.0
BYD3_k127_8103428_5 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 1.804e-206 650.0
BYD3_k127_8103428_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 4.551e-200 633.0
BYD3_k127_8103428_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 505.0
BYD3_k127_8103428_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 327.0
BYD3_k127_8103428_9 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 328.0
BYD3_k127_8151449_0 Flavoprotein involved in K transport - - - 6.514e-207 661.0
BYD3_k127_8151449_1 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 361.0
BYD3_k127_8151449_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008065 288.0
BYD3_k127_8151449_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009742 278.0
BYD3_k127_8151449_4 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001348 266.0
BYD3_k127_8151449_5 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000003239 162.0
BYD3_k127_8151449_6 Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000004234 160.0
BYD3_k127_8207299_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 4.947e-244 767.0
BYD3_k127_8207299_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 1.639e-225 712.0
BYD3_k127_8207299_10 TIGRFAM methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001076 267.0
BYD3_k127_8207299_11 Belongs to the P(II) protein family K04752 - - 0.00000000000000000000000000000000000000000000000000000000001356 208.0
BYD3_k127_8207299_12 PFAM PTS system fructose subfamily IIA component K02821 - 2.7.1.194 0.00000000000000000000000000000000000000000000000003333 181.0
BYD3_k127_8207299_13 PTS HPr component phosphorylation site K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000002471 123.0
BYD3_k127_8207299_14 - - - - 0.00000000000000001365 98.0
BYD3_k127_8207299_15 Domain of unknown function (DUF4124) - - - 0.0002197 47.0
BYD3_k127_8207299_2 Ammonium Transporter K03320 - - 6.71e-213 675.0
BYD3_k127_8207299_3 Glutamate-cysteine ligase K01919 - 6.3.2.2 4.699e-199 629.0
BYD3_k127_8207299_4 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004652 602.0
BYD3_k127_8207299_5 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 534.0
BYD3_k127_8207299_6 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 451.0
BYD3_k127_8207299_7 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 400.0
BYD3_k127_8207299_8 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 314.0
BYD3_k127_8207299_9 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001394 286.0
BYD3_k127_8214638_0 PFAM extracellular solute-binding protein family 1 K05813 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 566.0
BYD3_k127_8214638_1 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K05816,K10111,K10112 - 3.6.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 450.0
BYD3_k127_8214638_10 - - - - 0.0000000001049 64.0
BYD3_k127_8214638_2 PFAM binding-protein-dependent transport systems inner membrane component K05814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006479 431.0
BYD3_k127_8214638_3 probably responsible for the translocation of the substrate across the membrane K05815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 421.0
BYD3_k127_8214638_4 Subtilase family K08651 - 3.4.21.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 373.0
BYD3_k127_8214638_5 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 314.0
BYD3_k127_8214638_6 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 293.0
BYD3_k127_8214638_7 Short-chain dehydrogenase reductase sdr K00065 - 1.1.1.127 0.0000000000000000000000000000000000000001404 164.0
BYD3_k127_8214638_8 PFAM Dopa 4,5-dioxygenase family K10253 - - 0.000000000000000000000000000008978 122.0
BYD3_k127_8214638_9 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000000000000000000001525 109.0
BYD3_k127_8217615_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 618.0
BYD3_k127_8217615_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 480.0
BYD3_k127_8217615_10 Lipocalin-like domain - - - 0.000000000000000000000000000001473 124.0
BYD3_k127_8217615_11 SMART Cold shock protein K03704 - - 0.00000000000000000000000000002271 123.0
BYD3_k127_8217615_12 Tetratricopeptide repeat - - - 0.00000000000000000000000004229 124.0
BYD3_k127_8217615_13 MmgE/PrpD family - - - 0.0000000000000000002402 95.0
BYD3_k127_8217615_14 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000007287 61.0
BYD3_k127_8217615_15 Amidohydrolase - - - 0.0000001123 63.0
BYD3_k127_8217615_16 ubiquinone menaquinone biosynthesis methyltransferase - - - 0.000001267 53.0
BYD3_k127_8217615_17 ABC transporter substrate binding protein K01989 - - 0.00002038 50.0
BYD3_k127_8217615_2 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 396.0
BYD3_k127_8217615_3 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002987 274.0
BYD3_k127_8217615_4 PFAM NnrUfamily protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000003094 241.0
BYD3_k127_8217615_5 Belongs to the UPF0178 family K09768 - - 0.0000000000000000000000000000000000000000000000000000000000006552 214.0
BYD3_k127_8217615_6 Protein of unknown function (DUF3225) - - - 0.000000000000000000000000000000000000000000000000000006029 197.0
BYD3_k127_8217615_7 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000001492 166.0
BYD3_k127_8217615_8 Pfam:Methyltransf_26 - - - 0.00000000000000000000000000000000001104 145.0
BYD3_k127_8217615_9 Universal stress protein - - - 0.000000000000000000000000000000013 139.0
BYD3_k127_8242143_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 2.186e-317 995.0
BYD3_k127_8242143_1 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides K00364 - 1.7.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003486 516.0
BYD3_k127_8242143_10 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000001682 241.0
BYD3_k127_8242143_11 PFAM NAD binding domain of 6-phosphogluconate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000001113 233.0
BYD3_k127_8242143_12 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.000000000000000000000000000000000000000000000000009765 186.0
BYD3_k127_8242143_13 4,5-dihydroxyphthalate decarboxylase K04102 - 4.1.1.55 0.000000000000000000000000000000000000000000002101 177.0
BYD3_k127_8242143_14 HDOD domain - - - 0.0000000000000000000000000000000000000008944 158.0
BYD3_k127_8242143_15 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.00000000000000000000000000000000000002971 150.0
BYD3_k127_8242143_16 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000004362 147.0
BYD3_k127_8242143_17 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000003149 64.0
BYD3_k127_8242143_2 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 419.0
BYD3_k127_8242143_3 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005779 405.0
BYD3_k127_8242143_4 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 392.0
BYD3_k127_8242143_5 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005545 365.0
BYD3_k127_8242143_6 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 307.0
BYD3_k127_8242143_7 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 302.0
BYD3_k127_8242143_8 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000179 263.0
BYD3_k127_8242143_9 uracil-DNA K03648 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000001429 239.0
BYD3_k127_8311847_0 NMT1/THI5 like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 513.0
BYD3_k127_8311847_1 NMT1/THI5 like K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009476 463.0
BYD3_k127_8311847_10 AMP-binding enzyme C-terminal domain K00666,K01897,K02363,K04116,K12507,K16876,K18661 - 2.7.7.58,6.2.1.3,6.2.1.31,6.3.2.14 0.00000000008431 72.0
BYD3_k127_8311847_2 NMT1/THI5 like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 413.0
BYD3_k127_8311847_3 Toxic anion resistance protein (TelA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 364.0
BYD3_k127_8311847_4 ABC transporter K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 371.0
BYD3_k127_8311847_5 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 321.0
BYD3_k127_8311847_6 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000006222 223.0
BYD3_k127_8311847_7 ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000001636 231.0
BYD3_k127_8311847_8 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.000000000000000000000000000000000000000000000000000000000004482 214.0
BYD3_k127_8311847_9 - - - - 0.00000000000000000000006807 105.0
BYD3_k127_8316131_0 major facilitator superfamily K03446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008219 606.0
BYD3_k127_8316131_1 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 575.0
BYD3_k127_8316131_10 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000000000000000001365 164.0
BYD3_k127_8316131_11 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000000000004093 160.0
BYD3_k127_8316131_12 Belongs to the UPF0145 family - - - 0.00000000000000000000000000000000000000628 156.0
BYD3_k127_8316131_13 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000001608 138.0
BYD3_k127_8316131_14 - - - - 0.0000000000000000000000000000004236 124.0
BYD3_k127_8316131_15 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.00000000000000000000000004682 108.0
BYD3_k127_8316131_17 - - - - 0.00000004452 57.0
BYD3_k127_8316131_2 HI0933 family K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005531 476.0
BYD3_k127_8316131_3 Putative sugar-binding N-terminal domain K21948 - 2.7.1.217 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 454.0
BYD3_k127_8316131_4 PFAM multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 433.0
BYD3_k127_8316131_5 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 302.0
BYD3_k127_8316131_6 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 311.0
BYD3_k127_8316131_7 Class II Aldolase and Adducin N-terminal domain K22130 - 4.1.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004045 290.0
BYD3_k127_8316131_8 secretion protein HlyD K03543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000081 278.0
BYD3_k127_8316131_9 Belongs to the peptidase M48B family - - - 0.000000000000000000000000000000000000000000000000000003093 202.0
BYD3_k127_8386664_0 Phosphate transport system permease protein K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 466.0
BYD3_k127_8386664_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 436.0
BYD3_k127_8386664_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 289.0
BYD3_k127_8386664_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000004829 244.0
BYD3_k127_8386664_4 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000007929 224.0
BYD3_k127_8386664_5 Domain of unknown function (DUF3329) K07636 - 2.7.13.3 0.0000000001486 65.0
BYD3_k127_8405396_0 TonB dependent receptor K02014 - - 1.529e-206 664.0
BYD3_k127_8405396_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 550.0
BYD3_k127_8405396_10 Lipid A 3-O-deacylase (PagL) - - - 0.0000000000000000000000000000000000001034 151.0
BYD3_k127_8405396_11 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000001439 63.0
BYD3_k127_8405396_2 twitching motility protein K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007581 468.0
BYD3_k127_8405396_3 Belongs to the transferase hexapeptide repeat family K00674 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008666,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016749,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007107 413.0
BYD3_k127_8405396_4 Reductase C-terminal K00529 - 1.18.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003656 398.0
BYD3_k127_8405396_5 PFAM Aminotransferase class I and II K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 314.0
BYD3_k127_8405396_6 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007116 305.0
BYD3_k127_8405396_7 RNA cap guanine-N2 methyltransferase K07320 - 2.1.1.298 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004653 319.0
BYD3_k127_8405396_8 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 295.0
BYD3_k127_8405396_9 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000002602 176.0
BYD3_k127_840838_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 1.807e-313 966.0
BYD3_k127_840838_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.229e-257 803.0
BYD3_k127_840838_10 Spermidine synthase K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000004773 246.0
BYD3_k127_840838_11 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.000000000000000000000000000000000000000000000000000000000000000000004421 241.0
BYD3_k127_840838_12 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000119 167.0
BYD3_k127_840838_13 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000002283 161.0
BYD3_k127_840838_14 membrane - - - 0.00000000000000000000000000007745 123.0
BYD3_k127_840838_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 5.721e-256 800.0
BYD3_k127_840838_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 552.0
BYD3_k127_840838_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 340.0
BYD3_k127_840838_5 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 314.0
BYD3_k127_840838_6 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005936 323.0
BYD3_k127_840838_7 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 286.0
BYD3_k127_840838_8 Acetolactate synthase, small subunit K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000147 273.0
BYD3_k127_840838_9 Belongs to the WrbA family K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001689 270.0
BYD3_k127_8440860_0 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 410.0
BYD3_k127_8440860_1 Bacterial extracellular solute-binding protein K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006344 370.0
BYD3_k127_8440860_10 PFAM regulatory protein, LysR K02019 - - 0.000000000000000000000000001586 117.0
BYD3_k127_8440860_11 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.00000000000000000000005407 104.0
BYD3_k127_8440860_12 COG2005 N-terminal domain of molybdenum-binding protein - - - 0.000000007425 61.0
BYD3_k127_8440860_2 ABC-type tungstate transport system, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000017 276.0
BYD3_k127_8440860_3 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002951 279.0
BYD3_k127_8440860_4 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000096 275.0
BYD3_k127_8440860_5 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000008807 239.0
BYD3_k127_8440860_6 ligase activity, forming carbon-carbon bonds K00627,K02160,K07402 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000002879 244.0
BYD3_k127_8440860_7 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000000000000000000000000000000000000000005332 226.0
BYD3_k127_8440860_8 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000004825 228.0
BYD3_k127_8440860_9 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000000004295 149.0
BYD3_k127_8535192_0 glutathione transferase activity K00799,K03675 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000007175 255.0
BYD3_k127_8535192_1 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000007342 184.0
BYD3_k127_8540340_0 homoserine dehydrogenase K00003 - 1.1.1.3 8.699e-218 685.0
BYD3_k127_8540340_1 Aminotransferase K14261 - - 5.095e-205 644.0
BYD3_k127_8540340_10 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003831 284.0
BYD3_k127_8540340_11 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000415 285.0
BYD3_k127_8540340_12 Lysin motif K06194 - - 0.000000000000000000000000000000000000000000000000000000000000000000005787 247.0
BYD3_k127_8540340_13 histone deacetylase - - - 0.0000000000000000000000000000000000001545 148.0
BYD3_k127_8540340_14 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000000000009102 139.0
BYD3_k127_8540340_2 PFAM transglutaminase domain protein K22452 - 2.3.2.13 2.777e-203 653.0
BYD3_k127_8540340_3 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 496.0
BYD3_k127_8540340_4 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 449.0
BYD3_k127_8540340_5 PFAM ATPase associated with various cellular activities, AAA_3 K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 419.0
BYD3_k127_8540340_6 Taurine catabolism dioxygenase TauD, TfdA family K03119,K22303 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 406.0
BYD3_k127_8540340_7 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 368.0
BYD3_k127_8540340_8 Acyl-CoA dehydrogenase, C-terminal domain K16047 - 1.14.14.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 321.0
BYD3_k127_8540340_9 PFAM histone deacetylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 301.0
BYD3_k127_8559401_0 COG1884 Methylmalonyl-CoA mutase, N-terminal domain subunit K01847,K01848 GO:0003674,GO:0003824,GO:0004494,GO:0005488,GO:0008144,GO:0016853,GO:0016866,GO:0019842,GO:0031419,GO:0036094,GO:0046906,GO:0048037,GO:0097159,GO:1901363 5.4.99.2 0.0 1090.0
BYD3_k127_8559401_1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 9.686e-287 886.0
BYD3_k127_8559401_2 poly(R)-hydroxyalkanoic acid synthase K03821 - - 3.804e-256 812.0
BYD3_k127_8559401_3 Peptidase, M50 family - - - 1.767e-246 786.0
BYD3_k127_8559401_4 GAF domain protein - - - 4.971e-205 660.0
BYD3_k127_8559401_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 5.001e-203 657.0
BYD3_k127_8559401_6 SapC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 303.0
BYD3_k127_8559401_7 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001742 233.0
BYD3_k127_8574389_0 Flagellar basal body rod FlgEFG protein C-terminal K02396 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 618.0
BYD3_k127_8574389_1 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 482.0
BYD3_k127_8574389_10 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000000000000002514 170.0
BYD3_k127_8574389_11 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.00000000000000000000000000002668 128.0
BYD3_k127_8574389_12 Flagellar hook-associated protein 3 K02397 - - 0.0000000000000000000000000003962 117.0
BYD3_k127_8574389_13 bacterial-type flagellum organization K02398 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0009892,GO:0010556,GO:0010605,GO:0016989,GO:0019219,GO:0019222,GO:0030162,GO:0031323,GO:0031324,GO:0031326,GO:0032268,GO:0032269,GO:0045861,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.0000000000000001681 83.0
BYD3_k127_8574389_14 Flagellar biosynthesis type III secretory pathway chaperone K02399 - - 0.0000000000000005664 85.0
BYD3_k127_8574389_2 Flagellar basal body rod FlgEFG protein C-terminal K02390 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 454.0
BYD3_k127_8574389_3 Flagellar basal body rod FlgEFG protein C-terminal K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 412.0
BYD3_k127_8574389_4 Flagellar basal-body rod protein FlgF K02391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006854 284.0
BYD3_k127_8574389_5 Rod binding protein K02395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002322 282.0
BYD3_k127_8574389_6 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000000000000000000000000000000000000000000000007923 241.0
BYD3_k127_8574389_7 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.000000000000000000000000000000000000000000000000000000000000001971 228.0
BYD3_k127_8574389_8 fatty-acyl-CoA reductase (alcohol-forming) activity K01007,K18845 - 2.1.1.179,2.7.9.2 0.00000000000000000000000000000000000000000000000000000001428 216.0
BYD3_k127_8574389_9 Flagellar basal body rod FlgEFG protein C-terminal K02388 - - 0.0000000000000000000000000000000000000000000000001205 187.0
BYD3_k127_8595241_0 COG3653 N-acyl-D-aspartate D-glutamate deacylase - - - 1.846e-227 723.0
BYD3_k127_8595241_1 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 586.0
BYD3_k127_8595241_10 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006047 297.0
BYD3_k127_8595241_11 Aldolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004492 277.0
BYD3_k127_8595241_12 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004588 255.0
BYD3_k127_8595241_13 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000007561 199.0
BYD3_k127_8595241_14 cellular response to heat K09807 - - 0.0000000000000000000000000000001383 134.0
BYD3_k127_8595241_15 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000002916 85.0
BYD3_k127_8595241_2 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 551.0
BYD3_k127_8595241_3 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 536.0
BYD3_k127_8595241_4 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 381.0
BYD3_k127_8595241_5 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006774 366.0
BYD3_k127_8595241_6 Alcohol dehydrogenase GroES-like domain K00121 - 1.1.1.1,1.1.1.284 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 353.0
BYD3_k127_8595241_7 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01577,K01652,K03852 - 2.2.1.6,2.3.3.15,4.1.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 321.0
BYD3_k127_8595241_8 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004369 334.0
BYD3_k127_8595241_9 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 291.0
BYD3_k127_860180_0 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 332.0
BYD3_k127_860180_1 Asp/Glu/Hydantoin racemase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 326.0
BYD3_k127_860180_2 cell redox homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003558 258.0
BYD3_k127_860180_3 response to cobalt ion - - - 0.0000000000000000000000000000000007351 135.0
BYD3_k127_860180_4 - - - - 0.0000008828 58.0
BYD3_k127_8621941_0 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000001951 229.0
BYD3_k127_8621941_1 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000001189 228.0
BYD3_k127_8621941_2 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000007808 205.0
BYD3_k127_8621941_3 dienelactone hydrolase - - - 0.0000006473 61.0
BYD3_k127_8636834_0 Hydantoinase B/oxoprolinase - - - 4.605e-246 771.0
BYD3_k127_8636834_1 N-methylhydantoinase A acetone carboxylase, beta subunit K01469,K01473 - 3.5.2.14,3.5.2.9 1.715e-230 733.0
BYD3_k127_8636834_10 TIGRFAM TonB family protein K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004693 283.0
BYD3_k127_8636834_11 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007827 264.0
BYD3_k127_8636834_12 2Fe-2S -binding K13483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008307 248.0
BYD3_k127_8636834_13 Glutathione S-transferase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001379 253.0
BYD3_k127_8636834_14 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000002269 241.0
BYD3_k127_8636834_15 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000003699 235.0
BYD3_k127_8636834_16 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000002295 228.0
BYD3_k127_8636834_17 Uncharacterised protein family (UPF0227) K07000 - - 0.0000000000000000000000000000000000000000000000000000000000007294 215.0
BYD3_k127_8636834_18 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.00000000000000000000000000000000000000000000000000000006113 201.0
BYD3_k127_8636834_19 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000002534 178.0
BYD3_k127_8636834_2 - - - - 3.956e-211 678.0
BYD3_k127_8636834_20 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000001105 161.0
BYD3_k127_8636834_21 Predicted membrane protein (DUF2231) - - - 0.00000000000000000000000000000000000000001896 158.0
BYD3_k127_8636834_22 Protein of unknown function (DUF3606) - - - 0.0000003758 55.0
BYD3_k127_8636834_23 Electron transfer DM13 - - - 0.000001286 50.0
BYD3_k127_8636834_3 RNB K01147 - 3.1.13.1 8.907e-206 656.0
BYD3_k127_8636834_4 Na Pi-cotransporter II-related protein K03324 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 592.0
BYD3_k127_8636834_5 Alanine dehydrogenase/PNT, C-terminal domain K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005003 545.0
BYD3_k127_8636834_6 Natural resistance-associated macrophage protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 487.0
BYD3_k127_8636834_7 PFAM molybdopterin dehydrogenase, FAD-binding K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 363.0
BYD3_k127_8636834_8 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 324.0
BYD3_k127_8636834_9 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009093 310.0
BYD3_k127_865783_0 surface antigen K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 409.0
BYD3_k127_865783_1 short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 386.0
BYD3_k127_865783_2 protein conserved in bacteria K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 331.0
BYD3_k127_865783_3 - - - - 0.000000000000000000000000000000000000000000002493 171.0
BYD3_k127_8676555_0 Carbon-nitrogen hydrolase K11206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 302.0
BYD3_k127_8676555_1 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000002029 266.0
BYD3_k127_8676555_2 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.0000000000000000000000000000000001216 134.0
BYD3_k127_8694194_0 Uncharacterized protein family UPF0004 K06168 - 2.8.4.3 1.293e-208 661.0
BYD3_k127_8694194_1 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008509 400.0
BYD3_k127_8694194_2 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006534 366.0
BYD3_k127_8694194_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000000000000000000004519 241.0
BYD3_k127_8694194_4 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000006686 109.0
BYD3_k127_8763637_0 Molecular chaperone. Has ATPase activity K04079 - - 3.68e-286 915.0
BYD3_k127_8763637_1 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 553.0
BYD3_k127_8763637_10 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000003704 239.0
BYD3_k127_8763637_11 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000000003503 220.0
BYD3_k127_8763637_12 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000000001703 214.0
BYD3_k127_8763637_13 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000002258 202.0
BYD3_k127_8763637_14 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000006358 192.0
BYD3_k127_8763637_15 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000006384 178.0
BYD3_k127_8763637_16 Thioredoxin-like - - - 0.0000000000000000000000000000005352 129.0
BYD3_k127_8763637_17 methyltransferase - - - 0.000000007512 61.0
BYD3_k127_8763637_18 Tripartite tricarboxylate transporter TctB family - - - 0.0000003328 58.0
BYD3_k127_8763637_2 Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008027 528.0
BYD3_k127_8763637_3 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 494.0
BYD3_k127_8763637_4 amino acid K03294,K19540 GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006040,GO:0006082,GO:0006520,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009056,GO:0009063,GO:0009987,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0016054,GO:0019752,GO:0022804,GO:0022857,GO:0030389,GO:0030392,GO:0030393,GO:0031224,GO:0031226,GO:0034220,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044425,GO:0044459,GO:0044464,GO:0046348,GO:0046395,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0098656,GO:1901135,GO:1901136,GO:1901281,GO:1901564,GO:1901565,GO:1901575,GO:1902475,GO:1903825,GO:1905039 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006797 462.0
BYD3_k127_8763637_5 phosphogluconate dehydrogenase (decarboxylating) activity K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 368.0
BYD3_k127_8763637_6 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007854 336.0
BYD3_k127_8763637_7 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 342.0
BYD3_k127_8763637_8 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006186 310.0
BYD3_k127_8763637_9 phosphoserine phosphatase K02203 - 2.7.1.39,3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007062 282.0
BYD3_k127_8791326_0 Nitrile hydratase, alpha chain K01721 - 4.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000002057 230.0
BYD3_k127_8791326_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000001158 191.0
BYD3_k127_8791326_2 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.000000000000000000009422 103.0
BYD3_k127_8791326_3 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.000000000000003305 82.0
BYD3_k127_8791326_4 Catalyzes the conversion of maleate to fumarate - - - 0.0000000000007607 68.0
BYD3_k127_8842426_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0 1019.0
BYD3_k127_8842426_1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 2.974e-253 797.0
BYD3_k127_8842426_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 418.0
BYD3_k127_8842426_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005192 347.0
BYD3_k127_8842426_4 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000004601 260.0
BYD3_k127_8842426_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000001137 247.0
BYD3_k127_8842426_6 [2Fe-2S] binding domain - - - 0.000000000000000000000000000000000000000000000000000007234 194.0
BYD3_k127_8855291_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2233.0
BYD3_k127_8855291_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 5.737e-233 728.0
BYD3_k127_8855291_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 2.513e-195 633.0
BYD3_k127_8855291_3 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 522.0
BYD3_k127_88885_0 Histidine Phosphotransfer domain - - - 2.317e-229 748.0
BYD3_k127_88885_1 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 521.0
BYD3_k127_88885_10 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006752 287.0
BYD3_k127_88885_11 N-terminal half of MaoC dehydratase K09709,K18291 - 4.2.1.153,4.2.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001841 274.0
BYD3_k127_88885_12 Enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002081 276.0
BYD3_k127_88885_13 carboxymethylenebutenolidase activity K01061,K22249 - 3.1.1.45,3.1.1.76 0.000000000000000000000000000000000000000000000000000000000000000000000000009245 262.0
BYD3_k127_88885_14 Periplasmic binding protein LacI transcriptional regulator K10439 - - 0.00000000000000000000000000000000000000000000000000000000000000000003322 248.0
BYD3_k127_88885_15 Enoyl-CoA hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000004348 241.0
BYD3_k127_88885_16 Glutathione S-transferase - - - 0.0000000000000000000000000000000000000000000000000000000001659 212.0
BYD3_k127_88885_17 Patatin-like phospholipase - - - 0.0000000000000000000000000000000000000000000000000009024 195.0
BYD3_k127_88885_18 Belongs to the HpcH HpaI aldolase family K01644,K18292 - 4.1.3.25,4.1.3.34 0.0000000000000000000000000000000000000000000000001108 188.0
BYD3_k127_88885_19 Thioesterase superfamily protein - - - 0.00000000000000000000000000000000000000000000002189 174.0
BYD3_k127_88885_2 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 497.0
BYD3_k127_88885_20 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000004038 171.0
BYD3_k127_88885_21 MmgE PrpD family - - - 0.000000000000000000000000000000000000000000003279 175.0
BYD3_k127_88885_23 Thioesterase-like superfamily - - - 0.00000000000000000000000000000000000000001364 163.0
BYD3_k127_88885_24 Protein of unknown function (DUF1178) - - - 0.0000000000000000000000000000000000005666 149.0
BYD3_k127_88885_25 COG0226 ABC-type phosphate transport system, periplasmic component - - - 0.0000000000000000000000000000000008497 134.0
BYD3_k127_88885_26 Cupin domain - - - 0.000000000000000000000000000000003134 136.0
BYD3_k127_88885_27 Part of the ABC transporter complex PstSACB involved in phosphate import - - - 0.00000000000000000000000000000001708 134.0
BYD3_k127_88885_28 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.00000000000000000000000005533 116.0
BYD3_k127_88885_29 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.0000000000000000000002669 112.0
BYD3_k127_88885_3 L-carnitine dehydratase bile acid-inducible protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 457.0
BYD3_k127_88885_30 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.0000000000000000000004581 104.0
BYD3_k127_88885_31 Domain of unknown function (DUF4340) - - - 0.0000000002594 74.0
BYD3_k127_88885_4 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006954 381.0
BYD3_k127_88885_5 ABC-type uncharacterized transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007954 393.0
BYD3_k127_88885_6 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 381.0
BYD3_k127_88885_7 PFAM Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008792 375.0
BYD3_k127_88885_8 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 366.0
BYD3_k127_88885_9 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000581 291.0
BYD3_k127_8894090_0 Psort location Periplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 522.0
BYD3_k127_8894090_1 PFAM Sulfatase K01130 - 3.1.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007428 479.0
BYD3_k127_8894090_2 protein involved in propionate catabolism - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 431.0
BYD3_k127_8894090_3 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 308.0
BYD3_k127_8894090_4 PFAM SMP-30 Gluconolaconase LRE-like region K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000001606 246.0
BYD3_k127_8894090_5 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000006995 243.0
BYD3_k127_8894090_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.00000000000000001619 90.0
BYD3_k127_8894090_7 Sulfatase K01130 - 3.1.6.1 0.000000000000001567 81.0
BYD3_k127_8894090_8 GAF domain - - - 0.000000000000001917 81.0
BYD3_k127_8894090_9 Tripartite tricarboxylate transporter family receptor - - - 0.00002246 53.0
BYD3_k127_8900594_0 Belongs to the GcvT family K00302 - 1.5.3.1 0.0 1102.0
BYD3_k127_8900594_1 FAD dependent oxidoreductase K00303 - 1.5.3.1 9.577e-210 658.0
BYD3_k127_8900594_10 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0008150,GO:0009987,GO:0051301 - 0.000000000002805 80.0
BYD3_k127_8900594_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000842 349.0
BYD3_k127_8900594_3 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003397 284.0
BYD3_k127_8900594_4 mandelate racemase muconate lactonizing K01856,K02549 - 4.2.1.113,5.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009177 286.0
BYD3_k127_8900594_5 Protein of unknown function (DUF3750) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002931 275.0
BYD3_k127_8900594_6 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000579 236.0
BYD3_k127_8900594_7 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III - - - 0.000000000000000000000000000000000000000000000000000000000000000006412 229.0
BYD3_k127_8900594_8 Sarcosine oxidase K00304 - 1.5.3.1 0.0000000000000000000000000000000006367 143.0
BYD3_k127_8900594_9 Sarcosine oxidase, gamma subunit K00305 - 1.5.3.1 0.0000000000000000000000000000004709 129.0
BYD3_k127_8905404_0 COG0146 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 4.592e-248 777.0
BYD3_k127_8905404_1 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 6.114e-224 714.0
BYD3_k127_8905404_2 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases K01295 - 3.4.17.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 354.0
BYD3_k127_8905404_3 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 351.0
BYD3_k127_8905404_4 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 304.0
BYD3_k127_8905404_5 OST-HTH/LOTUS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000521 300.0
BYD3_k127_8905404_6 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000005143 246.0
BYD3_k127_8905404_7 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.0000000000000000000000000000000000000001559 154.0
BYD3_k127_8940443_0 - - - - 0.00000000000001751 86.0
BYD3_k127_8940443_1 translation initiation factor activity - - - 0.000006573 59.0
BYD3_k127_8944884_0 Sulfatase - - - 3.142e-202 643.0
BYD3_k127_8944884_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 310.0
BYD3_k127_8944884_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 304.0
BYD3_k127_8944884_3 Acetyl-CoA acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 321.0
BYD3_k127_8944884_4 racemase activity, acting on amino acids and derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003858 309.0
BYD3_k127_8944884_5 Protein of unknown function (DUF455) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002617 286.0
BYD3_k127_8944884_6 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000000000000000000000000000000005041 133.0
BYD3_k127_8944884_7 Beta-eliminating lyase K00812 - 2.6.1.1 0.0009201 45.0
BYD3_k127_8946982_0 Tetrapyrrole (Corrin/Porphyrin) Methylases K02303 - 2.1.1.107 0.00000000000000000000000000000000000000000000000000000000000000001647 232.0
BYD3_k127_8946982_1 Sporulation related domain - - - 0.00000000001806 72.0
BYD3_k127_8946982_2 Protein of unknown function (DUF2802) - - - 0.00000072 56.0
BYD3_k127_8960094_0 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 536.0
BYD3_k127_8960094_1 Polysaccharide deacetylase K22278 - 3.5.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 398.0
BYD3_k127_8960094_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 350.0
BYD3_k127_8960094_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822,K00833 - 2.6.1.18,2.6.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 328.0
BYD3_k127_8960094_4 RNA polymerase sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009672 307.0
BYD3_k127_8960094_5 MucB/RseB C-terminal domain K03598 - - 0.0000000000000000000000000000000000000000000000000000000000000000003693 243.0
BYD3_k127_8960094_6 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.00000000000000000000002641 108.0
BYD3_k127_8965595_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1045.0
BYD3_k127_8965595_1 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 2.548e-221 697.0
BYD3_k127_8965595_10 N-terminal half of MaoC dehydratase K09709,K18291 - 4.2.1.153,4.2.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007258 314.0
BYD3_k127_8965595_11 VWA-like domain (DUF2201) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 291.0
BYD3_k127_8965595_12 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005442 283.0
BYD3_k127_8965595_13 Nudix N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000115 279.0
BYD3_k127_8965595_14 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000165 223.0
BYD3_k127_8965595_15 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000004749 204.0
BYD3_k127_8965595_16 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000000000000000000000000004081 140.0
BYD3_k127_8965595_17 Thioesterase superfamily - - - 0.00000000000000000000000003717 114.0
BYD3_k127_8965595_18 - - - - 0.00000000000002063 87.0
BYD3_k127_8965595_19 TPR repeat - - - 0.000000003033 66.0
BYD3_k127_8965595_2 Acyl-CoA dehydrogenase, N-terminal domain K00252 - 1.3.8.6 5.522e-205 653.0
BYD3_k127_8965595_20 Ribbon-helix-helix protein, copG family - - - 0.0000001102 58.0
BYD3_k127_8965595_21 COG0457 FOG TPR repeat - - - 0.000002652 56.0
BYD3_k127_8965595_3 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 6.824e-205 649.0
BYD3_k127_8965595_4 Ammonium Transporter Family K03320,K06580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005438 578.0
BYD3_k127_8965595_5 acetyl-coa acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008738 560.0
BYD3_k127_8965595_6 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 527.0
BYD3_k127_8965595_7 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 428.0
BYD3_k127_8965595_8 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 413.0
BYD3_k127_8965595_9 polyphosphate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 384.0
BYD3_k127_8994653_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 7.773e-219 695.0
BYD3_k127_8994653_1 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795 601.0
BYD3_k127_8994653_2 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 584.0
BYD3_k127_8994653_3 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 453.0
BYD3_k127_8994653_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 435.0
BYD3_k127_8994653_5 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000797 422.0
BYD3_k127_8994653_6 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 346.0
BYD3_k127_8994653_7 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007444 274.0
BYD3_k127_8994653_8 Nucleotidyl transferase K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000001568 254.0
BYD3_k127_8994653_9 Belongs to the transcriptional regulatory Fis family K03557 - - 0.000000000000000000000001642 111.0
BYD3_k127_9009_0 Type II secretion system (T2SS), protein E, N-terminal domain - - - 1.511e-263 823.0
BYD3_k127_9009_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007456 586.0
BYD3_k127_9009_10 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004406 294.0
BYD3_k127_9009_11 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 298.0
BYD3_k127_9009_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004474 266.0
BYD3_k127_9009_13 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant K20862 - 3.1.3.102,3.1.3.104 0.00000000000000000000000000000000000000000000000000000000005544 211.0
BYD3_k127_9009_14 MlaC protein K07323 - - 0.000000000000000000000000000000000000000000000000000000004906 206.0
BYD3_k127_9009_15 P-aminobenzoate N-oxygenase AurF - - - 0.00000000000000000000000000000000000000000000000000000351 203.0
BYD3_k127_9009_16 PFAM Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000000000000000000000000000000000003257 205.0
BYD3_k127_9009_17 transport system small permease component - - - 0.00000000000000000000000000000000000000000000002252 176.0
BYD3_k127_9009_18 type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000001303 173.0
BYD3_k127_9009_19 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000003538 161.0
BYD3_k127_9009_2 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 582.0
BYD3_k127_9009_20 - - - - 0.000000000000000000000000000000001144 141.0
BYD3_k127_9009_21 Belongs to the BolA IbaG family - - - 0.0000000000000000000000001154 109.0
BYD3_k127_9009_22 transporter antisigma-factor antagonist STAS K07122 - - 0.000000000000002992 87.0
BYD3_k127_9009_23 - - - - 0.000000000000008522 78.0
BYD3_k127_9009_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 574.0
BYD3_k127_9009_4 PFAM Sporulation domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 476.0
BYD3_k127_9009_5 Type II secretion system (T2SS), protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 444.0
BYD3_k127_9009_6 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 401.0
BYD3_k127_9009_7 ABC transport system ATP-binding protein K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 371.0
BYD3_k127_9009_8 Type II and III secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005137 347.0
BYD3_k127_9009_9 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005182 321.0
BYD3_k127_9050060_0 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007245 299.0
BYD3_k127_9050060_1 MmgE/PrpD family K01720 - 4.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000002116 251.0
BYD3_k127_9050060_2 Peptidase M22 glycoprotease K14742 - - 0.00000000000000000000000000000000000000000000000000000000000006471 218.0
BYD3_k127_9050060_3 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000002381 198.0
BYD3_k127_9050060_4 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000000000000000000001235 154.0
BYD3_k127_9050060_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000001084 72.0
BYD3_k127_9083195_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006609 432.0
BYD3_k127_9083195_1 Glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009115 315.0
BYD3_k127_9083195_2 Domain of unknown function (DUF4124) - - - 0.00000000002251 72.0
BYD3_k127_925980_0 Iron-containing alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009221 436.0
BYD3_k127_925980_1 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 350.0
BYD3_k127_925980_2 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 317.0
BYD3_k127_925980_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005153 288.0
BYD3_k127_925980_4 Selenoprotein B glycine betaine sarcosine D-proline reductase K10794 - 1.21.4.1 0.0000000003186 66.0
BYD3_k127_927418_0 aminopeptidase N K01256 - 3.4.11.2 0.0 1137.0
BYD3_k127_927418_1 COG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit K13796 - - 2.006e-228 718.0
BYD3_k127_927418_10 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000006979 175.0
BYD3_k127_927418_11 Histidine kinase-like ATPase domain - - - 0.0000000000000000000000000000000000000000005262 171.0
BYD3_k127_927418_12 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000001271 158.0
BYD3_k127_927418_13 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.00000000000000000000000000000000008984 153.0
BYD3_k127_927418_15 phenylacetate-CoA ligase activity - - - 0.0000000000000000000000002351 118.0
BYD3_k127_927418_2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 5.404e-203 652.0
BYD3_k127_927418_3 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 584.0
BYD3_k127_927418_4 Histidine kinase K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009727 348.0
BYD3_k127_927418_5 Enoyl-CoA hydratase/isomerase K20765 - 3.7.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006201 275.0
BYD3_k127_927418_6 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000262 270.0
BYD3_k127_927418_7 Dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000001926 251.0
BYD3_k127_927418_8 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000002568 243.0
BYD3_k127_927418_9 helix_turn_helix, Lux Regulon K14979 - - 0.0000000000000000000000000000000000000000000000000000001028 203.0
BYD3_k127_966037_0 Hydrolase CocE NonD family K06978 - - 3.722e-205 644.0
BYD3_k127_966037_1 CoA binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008603 549.0
BYD3_k127_998223_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11745,K11747 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006894 607.0
BYD3_k127_998223_1 FAD binding domain K00480 - 1.14.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 556.0
BYD3_k127_998223_10 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000001541 237.0
BYD3_k127_998223_11 Cysteine-rich secretory protein family - - - 0.0000000000000000000000000000000000000000000000000006282 199.0
BYD3_k127_998223_12 Cytochrome c - - - 0.00000000000000000000000000000000000000000000001274 177.0
BYD3_k127_998223_13 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000002842 131.0
BYD3_k127_998223_14 Catalyzes the conversion of maleate to fumarate K01799,K06033 - 4.1.1.76,5.2.1.1 0.00000000000000000000000000564 121.0
BYD3_k127_998223_2 III protein, CoA-transferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007649 523.0
BYD3_k127_998223_3 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 467.0
BYD3_k127_998223_4 PFAM Transketolase central region K00162,K21417 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 451.0
BYD3_k127_998223_5 amidohydrolase 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006379 416.0
BYD3_k127_998223_6 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008812 367.0
BYD3_k127_998223_7 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 306.0
BYD3_k127_998223_8 short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000123 287.0
BYD3_k127_998223_9 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006281 274.0
BYD3_k127_999326_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 1.068e-220 697.0
BYD3_k127_999326_1 Carboxyl transferase domain - - - 2.955e-213 673.0
BYD3_k127_999326_10 Biotin-lipoyl like K02160 - - 0.000000000000000001951 87.0
BYD3_k127_999326_11 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.000000003088 64.0
BYD3_k127_999326_2 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 505.0
BYD3_k127_999326_3 PFAM Electron transfer flavoprotein domain K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000008264 230.0
BYD3_k127_999326_4 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000000000000000000001064 218.0
BYD3_k127_999326_5 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000000000004793 212.0
BYD3_k127_999326_6 PFAM Mo-co oxidoreductase dimerisation domain K17225 - - 0.00000000000000000000000000000000000000000000000000000382 208.0
BYD3_k127_999326_7 electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000001039 190.0
BYD3_k127_999326_8 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000000000009622 173.0
BYD3_k127_999326_9 - - - - 0.00000000000000000000000001717 119.0